Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001438

Physical Location & Seq

Genomic Coordinates Forward (+)

10806772 .. 10811836

Gene Structure 5065 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG134200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCCGCCGAAAATGACGAAAAGACCCTCCAAGAGGAGCTGTGCCTCCCCATCGTCCTCGCGGATCGGGTCCTCAAGTCGGCCCACGAGGCCGAGTCGTCCAAGCCCGAGTGCGCCGACCTGGCCCACCAAGTCGACCGCCTCTCCCAGATGCTCCGATCCGCCGTCCGCATCGCCGCCGCCGCCTCCCCCTCCCTCTACGAGCGCCCCGTCCGACGCATCGCGGCCGACGTGGCCAAGAACCTGGACCGCGCGCTCAGCCTCGTCCGCAAGTGCAAGCACAGCGGCGTCCTCCGCCAGGTCTTCTCCATCACCACCGCCGCCGACTTCCGCAAGGTGTCGAACCTCCTCGAGTCGTCGATCGGCGACATGAAGTGGCTCCTGTCGGTGTTCGAGTCCGACGGCGCCAACCTCTCCCTGCCGCCCATCGCCAGCAACGACCCGATTCTGAGCTGGGTGTGGTCCTACATCGCCACCATTCAGATGGGTCAGCTCCGGGACCGAGTGGAGGCGGCGAGTTCGCTCGTCTCGCTGGCGAGGGACAACGACCGGAACAAGAAGATAATTGTTGACGAGGGAGGAGTGACGCCGCTGCTCAAGCTTTTGAAAGAGGGGTCTTCGGCGGAGGCACAGATTGCTGCGGCGAATGCTCTGTTTCATATCGCTACGGACCAGGAGAGGGTTCGGACTGTAATCGAGTTGAATGGGATTCCGATGATAGTTTCGGTTTTGGGGGATTCGCCGATGAGGGTTCAGGCCGCGGTGGTGAGATTGGTGGCCGAAATGGCGGAGCTTGACCCGATTGCGCAGGAGGACTTTGCCAGAGAAAATGTGACTAGGCCCTTGGTGTCTCTGTTGGCTATGGATACGGTTCTGGATGAGCCGAAACCGCAGTCGGGTAAGCCCAGCATTCATTCGCTTGTGATTAATAACGAGTTGGTAGGAAAGGGGGCGAATTCGAGTAGTAGGTTGGGCTCCTTTAGTTCGAATCATTATCATTCTGATGGGAGTAGTAGAGGCGGGCATTATAGGAAAGATAGGGAGAGAGAGTTCGAGAGCCCTGAGGTCAAGCTCAACCTCAAGGTTGGTTGTGCTGAGGCATTGTGGAAGTTGTGTAGAGATTGTTTGTTGAATAGTCGAAAAGTTACAGAGACTAAAGGGTTGATTTGTTTGGCCAAGATTGTTGACAAGGAGGTTGGGGAATTGCAGCTTAATTGCTTGATGACTGTGATGGAAATAGCTGCAGTGGCAGAGTCAAATCCAGAGCTTAGACGATCGGCTTTTAAGCCCAACTCTCCGGCTGCAAAGGCAGTTGTCGATCAGCTTATGAGGGTTATTCAAGAAGAGGGTAACCCGGATCTGCAAATACCGGCAATCAAGGGAATTGGGTCACTCGCAAGAACTTTTGCCGCCAGGGAAACCCGGATAGTTGGTCCTTTGGTTGCACGGCTGGGTAATGTGAATGTGGATGTGGCAACTGAGGCTGCCATTGCATTGGGAAAGTTTGTGTGCTTGGAGAACTTCAACCGAGTAGAGCATTCCAAGACGATAATTGAGTTCGATGGGGTTCCTTCTCTGATGAGATTGTTGAAGGCTACTGATCGGACCAACGAACTTGCTCACTTGCACTGCCTAGAACTTTTATGTTACCTCGCATTGCACGTAGGCAATAGCAAGGCTCTCGAACAAGCACAGGTGTTGAGTACTCTCGAGGGGGGAGCTCGTTCTGCTGTGGCACAAAATCCAGATTTGAAGGAGTTGTTTTCCAAAGCCATACACCATCTCAGTCTTTATCAGCCTGGAGCTCATCCCCACAGGCAAACTTTCATGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008156 GO:0008285 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0019219 GO:0019222 GO:0031261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0034641 GO:0034645 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

611

Amino Acids

66.76

Weight (kDa)

6.62

Isoelectric Point (pI)

33.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7792	PF25055	11 - 131	2.3e-49	Domain of unknown function (DUF7792)
ARM_PUB	PF25598	165 - 445	3.9e-06	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26600 AT3G26600
fragaria_vesca	FvH4_4g25480 FvH4_5g06080
malus_domestica	MD06G1167100.v1.1 MD13G1102400.v1.1 MD14G1172700.v1.1 MD16G1102800.v1.1
prunus_persica	Prupe.1G089500_v2.0.a1 Prupe.1G243400_v2.0.a1 Prupe.5G166900_v2.0.a1
pyrus_communis	pycom06g14970 pycom06g14980 pycom13g08950 pycom14g14410 pycom16g08740
rosa_chinensis	RchiOBHm_Chr4g0423211 RchiOBHm_Chr4g0432811 RchiOBHm_Chr7g0192761 RchiOBHm_Chr7g0218041
rosa_laevigata	RLG00000004331 RLG00000006810
rosa_multiflora	Rmu_co8276235.1_g000001 Rmu_sc0001516.1_g000053 Rmu_sc0004101.1_g000049 Rmu_sc0005234.1_g000003 Rmu_sc0008148.1_g000037
rosa_roxburghii	Rroxscaffold_2G00090530 Rroxscaffold_3G00262710 Rroxscaffold_5G00374250 Rroxscaffold_7G00212840
rosa_rugosa	Rorug04G0263100 Rorug07G0004500
rosa_samantha	Rh1AG125500 Rh2AG461900 Rh2CG448900 Rh4AG317200 Rh4AG322300 Rh4BG325400 Rh4CG340300 Rh4DG320600 Rh4DG326400 Rh5BG349900 Rh5CG383400 Rh7AG129500 Rh7AG315400 Rh7BG130800 Rh7CG061100 Rh7CG134200 Rh7DG131700
rosa_wichuraiana	Rw4G027590 Rw7G011080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	807
AccB1I	GGYRCC	1 cut(s)	404
AccI	GTMKAC	1 cut(s)	135
AccII	CGCG	5 cut(s)	62, 224, 252, 254, 761
AclWI	GGATC	3 cut(s)	72, 153, 1365
AcoI	YGGCCR	5 cut(s)	3, 225, 234, 777, 1173
AcsI	RAATTY	1 cut(s)	955
AcyI	GRCGYC	3 cut(s)	288, 405, 587
AfaI	GTAC	1 cut(s)	1705
AfiI	CCNNNNNNNGG	6 cut(s)	34, 79, 298, 508, 679, 896
AgsI	TTSAA	7 cut(s)	607, 703, 1132, 1340, 1525, 1591, 1753
AjiI	CACGTC	1 cut(s)	232
AjnI	CCWGG	6 cut(s)	120, 243, 297, 672, 1412, 1798
AloI	GAACNNNNNNTCC	2 cut(s)	1034, 1066
Alw21I	GWGCWC	2 cut(s)	1723, 1807
Alw26I	GTCTC	3 cut(s)	532, 855, 1145
AlwI	GGATC	3 cut(s)	72, 153, 1365
Ama87I	CYCGRG	3 cut(s)	107, 350, 1709
ApeKI	GCWGC	6 cut(s)	592, 638, 1207, 1241, 1301, 1484
ApoI	RAATTY	1 cut(s)	955
ArsI	GACNNNNNNTTYG	2 cut(s)	878, 910
AseI	ATTAAT	1 cut(s)	927
AspLEI	GCGC	6 cut(s)	116, 207, 254, 256, 407, 808
AsuC2I	CCSGG	3 cut(s)	497, 1355, 1423
AsuHPI	GGTGA	2 cut(s)	304, 778
AsuII	TTCGAA	1 cut(s)	986
AvaI	CYCGRG	3 cut(s)	107, 350, 1709
AvaII	GGWCC	7 cut(s)	70, 247, 462, 499, 670, 1433, 1605
AxyI	CCTNAGG	1 cut(s)	1062
BalI	TGGCCA	2 cut(s)	236, 1175
BanI	GGYRCC	1 cut(s)	404
BanII	GRGCYC	4 cut(s)	977, 1061, 1723, 1807
BauI	CACGAG	1 cut(s)	86
BbsI	GAAGAC	2 cut(s)	295, 609
Bbv12I	GWGCWC	2 cut(s)	1723, 1807
BbvCI	CCTCAGC	1 cut(s)	1095
BbvI	GCAGC	6 cut(s)	579, 625, 1219, 1228, 1288, 1471
BccI	CCATC	8 cut(s)	59, 317, 434, 478, 998, 1225, 1556, 1788
BceAI	ACGGC	3 cut(s)	149, 418, 1463
BcgI	CGANNNNNNTGC	2 cut(s)	1663, 1697
BciT130I	CCWGG	6 cut(s)	122, 245, 299, 674, 1414, 1800
BciVI	GTATCC	1 cut(s)	859
BcnI	CCSGG	3 cut(s)	497, 1355, 1423
BcoDI	GTCTC	3 cut(s)	532, 855, 1145
BfaI	CTAG	2 cut(s)	837, 1634
BfmI	CTRYAG	1 cut(s)	1242
BfoI	RGCGCY	2 cut(s)	208, 408
BfuI	GTATCC	1 cut(s)	859
BglI	GCCNNNNNGGC	4 cut(s)	89, 122, 233, 785
BlpI	GCTNAGC	1 cut(s)	257
BmcAI	AGTACT	1 cut(s)	1705
Bme1390I	CCNGG	9 cut(s)	122, 245, 299, 497, 674, 1355, 1414, 1423, 1800
Bme18I	GGWCC	7 cut(s)	70, 247, 462, 499, 670, 1433, 1605
BmeT110I	CYCGRG	3 cut(s)	107, 350, 1709
BmgBI	CACGTC	1 cut(s)	232
BmiI	GGNNCC	6 cut(s)	71, 380, 406, 500, 976, 1569
BmrFI	CCNGG	9 cut(s)	122, 245, 299, 497, 674, 1355, 1414, 1423, 1800
BmsI	GCATC	3 cut(s)	141, 180, 228
BpiI	GAAGAC	2 cut(s)	295, 609
BpmI	CTGGAG	1 cut(s)	1821
Bpu10I	CCTNAGC	1 cut(s)	1095
Bpu1102I	GCTNAGC	1 cut(s)	257
Bpu14I	TTCGAA	1 cut(s)	986
BpuEI	CTTGAG	3 cut(s)	59, 581, 1064
BpuMI	CCSGG	3 cut(s)	497, 1355, 1423
BsaAI	YACGTR	1 cut(s)	1663
BsaHI	GRCGYC	3 cut(s)	288, 405, 587
BsaJI	CCNNGG	3 cut(s)	759, 843, 1413
BsaWI	WCCGGW	1 cut(s)	549
BsaXI	ACNNNNNCTCC	4 cut(s)	128, 158, 1034, 1064
Bsc4I	CCNNNNNNNGG	6 cut(s)	34, 79, 298, 508, 679, 896
Bse118I	RCCGGY	1 cut(s)	1369
Bse21I	CCTNAGG	1 cut(s)	1062
Bse3DI	GCAATG	2 cut(s)	1488, 1655
BseBI	CCWGG	6 cut(s)	122, 245, 299, 674, 1414, 1800
BseDI	CCNNGG	3 cut(s)	759, 843, 1413
BseGI	GGATG	3 cut(s)	883, 1474, 1807
BseLI	CCNNNNNNNGG	6 cut(s)	34, 79, 298, 508, 679, 896
BseMI	GCAATG	2 cut(s)	1488, 1655
BseMII	CTCAG	6 cut(s)	271, 440, 1053, 1086, 1470, 1798
BsePI	GCGCGC	1 cut(s)	252
BseRI	GAGGAG	3 cut(s)	50, 338, 594
BseX3I	CGGCCG	1 cut(s)	225
BseXI	GCAGC	6 cut(s)	579, 625, 1219, 1228, 1288, 1471
BseYI	CCCAGC	3 cut(s)	453, 905, 1450
Bsh1236I	CGCG	5 cut(s)	62, 224, 252, 254, 761
Bsh1285I	CGRYCG	5 cut(s)	139, 228, 363, 550, 1277
BshNI	GGYRCC	1 cut(s)	404
BsiEI	CGRYCG	5 cut(s)	139, 228, 363, 550, 1277
BsiHKAI	GWGCWC	2 cut(s)	1723, 1807
BsiHKCI	CYCGRG	3 cut(s)	107, 350, 1709
BsiSI	CCGG	6 cut(s)	496, 550, 1298, 1355, 1370, 1423
BslFI	GGGAC	2 cut(s)	512, 554
BslI	CCNNNNNNNGG	6 cut(s)	34, 79, 298, 508, 679, 896
BsmAI	GTCTC	3 cut(s)	532, 855, 1145
BsmBI	CGTCTC	1 cut(s)	532
BsmFI	GGGAC	2 cut(s)	512, 554
BsmI	GAATGC	3 cut(s)	652, 909, 1537
BsoBI	CYCGRG	3 cut(s)	107, 350, 1709
Bsp119I	TTCGAA	1 cut(s)	986
Bsp1286I	GDGCHC	4 cut(s)	977, 1061, 1723, 1807
Bsp143I	GATC	7 cut(s)	64, 158, 360, 1274, 1318, 1357, 1600
Bsp1720I	GCTNAGC	1 cut(s)	257
BspCNI	CTCAG	6 cut(s)	270, 441, 1054, 1087, 1471, 1797
BspFNI	CGCG	5 cut(s)	62, 224, 252, 254, 761
BspLI	GGNNCC	6 cut(s)	71, 380, 406, 500, 976, 1569
BspMAI	CTGCAG	1 cut(s)	1246
BspPI	GGATC	3 cut(s)	72, 153, 1365
BspT104I	TTCGAA	1 cut(s)	986
BspT107I	GGYRCC	1 cut(s)	404
BsrDI	GCAATG	2 cut(s)	1488, 1655
BsrFI	RCCGGY	1 cut(s)	1369
BssAI	RCCGGY	1 cut(s)	1369
BssECI	CCNNGG	3 cut(s)	759, 843, 1413
BssHII	GCGCGC	1 cut(s)	252
BssMI	GATC	7 cut(s)	64, 158, 360, 1274, 1318, 1357, 1600
BssNI	GRCGYC	3 cut(s)	288, 405, 587
BssSI	CACGAG	1 cut(s)	86
BssT1I	CCWWGG	1 cut(s)	843
Bst2BI	CACGAG	1 cut(s)	86
Bst2UI	CCWGG	6 cut(s)	122, 245, 299, 674, 1414, 1800
Bst4CI	ACNGT	3 cut(s)	691, 871, 1228
Bst6I	CTCTTC	1 cut(s)	1338
BstACI	GRCGYC	3 cut(s)	288, 405, 587
BstAPI	GCANNNNNTGC	1 cut(s)	635
BstBAI	YACGTR	1 cut(s)	1663
BstBI	TTCGAA	1 cut(s)	986
BstC8I	GCNNGC	5 cut(s)	254, 278, 433, 534, 1022
BstDEI	CTNAG	7 cut(s)	257, 449, 1062, 1095, 1268, 1479, 1784
BstDSI	CCRYGG	1 cut(s)	759
BstEII	GGTNACC	1 cut(s)	1349
BstENI	CCTNNNNNAGG	2 cut(s)	32, 296
BstF5I	GGATG	3 cut(s)	883, 1474, 1807
BstFNI	CGCG	5 cut(s)	62, 224, 252, 254, 761
BstH2I	RGCGCY	2 cut(s)	208, 408
BstHHI	GCGC	6 cut(s)	116, 207, 254, 256, 407, 808
BstKTI	GATC	7 cut(s)	67, 161, 363, 1277, 1321, 1360, 1603
BstMAI	GTCTC	3 cut(s)	532, 855, 1145
BstMBI	GATC	7 cut(s)	64, 158, 360, 1274, 1318, 1357, 1600
BstMCI	CGRYCG	5 cut(s)	139, 228, 363, 550, 1277
BstNI	CCWGG	6 cut(s)	122, 245, 299, 674, 1414, 1800
BstPI	GGTNACC	1 cut(s)	1349
BstSCI	CCNGG	9 cut(s)	120, 243, 297, 495, 672, 1353, 1412, 1421, 1798
BstSFI	CTRYAG	1 cut(s)	1242
BstUI	CGCG	5 cut(s)	62, 224, 252, 254, 761
BstV1I	GCAGC	6 cut(s)	579, 625, 1219, 1228, 1288, 1471
BstV2I	GAAGAC	2 cut(s)	295, 609
BstX2I	RGATCY	1 cut(s)	1357
BstXI	CCANNNNNNTGG	3 cut(s)	244, 484, 1495
BstYI	RGATCY	1 cut(s)	1357
BstZI	CGGCCG	1 cut(s)	225
Bsu36I	CCTNAGG	1 cut(s)	1062
BsuI	GTATCC	1 cut(s)	859
BtgI	CCRYGG	1 cut(s)	759
BtgZI	GCGATG	4 cut(s)	157, 205, 412, 454
BtrI	CACGTC	1 cut(s)	232
BtsCI	GGATG	3 cut(s)	883, 1474, 1807
BtsI	GCAGTG	2 cut(s)	1251, 1627
BtsIMutI	CAGTG	2 cut(s)	1251, 1627
Cac8I	GCNNGC	5 cut(s)	254, 278, 433, 534, 1022
CfoI	GCGC	6 cut(s)	116, 207, 254, 256, 407, 808
Cfr10I	RCCGGY	1 cut(s)	1369
Cfr42I	CCGCGG	1 cut(s)	762
CseI	GACGC	3 cut(s)	225, 277, 595
Csp6I	GTAC	1 cut(s)	1704
CviAII	CATG	2 cut(s)	370, 1828
CviQI	GTAC	1 cut(s)	1704
DdeI	CTNAG	7 cut(s)	257, 449, 1062, 1095, 1268, 1479, 1784
DinI	GGCGCC	1 cut(s)	406
DpnI	GATC	7 cut(s)	66, 160, 362, 1276, 1320, 1359, 1602
DpnII	GATC	7 cut(s)	64, 158, 360, 1274, 1318, 1357, 1600
EaeI	YGGCCR	5 cut(s)	3, 225, 234, 777, 1173
EagI	CGGCCG	1 cut(s)	225
Eam1104I	CTCTTC	1 cut(s)	1338
EarI	CTCTTC	1 cut(s)	1338
EciI	GGCGGA	4 cut(s)	151, 284, 638, 803
Ecl136II	GAGCTC	2 cut(s)	1721, 1805
EclXI	CGGCCG	1 cut(s)	225
Eco130I	CCWWGG	1 cut(s)	843
Eco24I	GRGCYC	4 cut(s)	977, 1061, 1723, 1807
Eco47I	GGWCC	7 cut(s)	70, 247, 462, 499, 670, 1433, 1605
Eco52I	CGGCCG	1 cut(s)	225
Eco53kI	GAGCTC	2 cut(s)	1721, 1805
Eco81I	CCTNAGG	1 cut(s)	1062
Eco88I	CYCGRG	3 cut(s)	107, 350, 1709
Eco91I	GGTNACC	1 cut(s)	1349
EcoICRI	GAGCTC	2 cut(s)	1721, 1805
EcoNI	CCTNNNNNAGG	2 cut(s)	32, 296
EcoO109I	RGGNCCY	2 cut(s)	70, 840
EcoO65I	GGTNACC	1 cut(s)	1349
EcoRI	GAATTC	1 cut(s)	955
EcoRII	CCWGG	6 cut(s)	120, 243, 297, 672, 1412, 1798
EcoT14I	CCWWGG	1 cut(s)	843
EcoT38I	GRGCYC	4 cut(s)	977, 1061, 1723, 1807
EgeI	GGCGCC	1 cut(s)	406
EheI	GGCGCC	1 cut(s)	406
ErhI	CCWWGG	1 cut(s)	843
Esp3I	CGTCTC	1 cut(s)	532
FaeI	CATG	2 cut(s)	373, 1831
FaiI	YATR	9 cut(s)	371, 660, 863, 1029, 1328, 1645, 1775, 1829, 1834
FaqI	GGGAC	2 cut(s)	512, 554
FatI	CATG	2 cut(s)	369, 1827
FauI	CCCGC	1 cut(s)	1013
FblI	GTMKAC	1 cut(s)	135
FokI	GGATG	3 cut(s)	890, 1481, 1794
FriOI	GRGCYC	4 cut(s)	977, 1061, 1723, 1807
FspBI	CTAG	2 cut(s)	837, 1634
FspI	TGCGCA	1 cut(s)	807
GlaI	GCGC	6 cut(s)	115, 206, 253, 255, 406, 807
GsaI	CCCAGC	3 cut(s)	457, 909, 1454
GsuI	CTGGAG	1 cut(s)	1821
HaeII	RGCGCY	2 cut(s)	208, 408
HapII	CCGG	6 cut(s)	496, 550, 1298, 1355, 1370, 1423
HgaI	GACGC	3 cut(s)	225, 277, 595
HhaI	GCGC	6 cut(s)	116, 207, 254, 256, 407, 808
Hin1I	GRCGYC	3 cut(s)	288, 405, 587
Hin1II	CATG	2 cut(s)	373, 1831
Hin6I	GCGC	6 cut(s)	114, 205, 252, 254, 405, 806
HinP1I	GCGC	6 cut(s)	114, 205, 252, 254, 405, 806
HincII	GTYRAC	3 cut(s)	136, 571, 1186
HindII	GTYRAC	3 cut(s)	136, 571, 1186
HindIII	AAGCTT	1 cut(s)	599
HinfI	GANTC	8 cut(s)	95, 353, 395, 445, 709, 737, 988, 1253
HpaII	CCGG	6 cut(s)	496, 550, 1298, 1355, 1370, 1423
HphI	GGTGA	2 cut(s)	304, 778
Hpy166II	GTNNAC	3 cut(s)	136, 571, 1186
Hpy188III	TCNNGA	7 cut(s)	875, 1054, 1262, 1340, 1682, 1709, 1745
Hpy8I	GTNNAC	3 cut(s)	136, 571, 1186
Hpy99I	CGWCG	4 cut(s)	219, 233, 361, 404
HpyAV	CCTTC	3 cut(s)	1581, 1585, 1747
HpyCH4III	ACNGT	3 cut(s)	691, 871, 1228
HpyCH4IV	ACGT	2 cut(s)	231, 1662
HpyCH4V	TGCA	9 cut(s)	276, 1207, 1244, 1304, 1363, 1445, 1493, 1627, 1660
HpyF3I	CTNAG	7 cut(s)	257, 449, 1062, 1095, 1268, 1479, 1784
HpySE526I	ACGT	2 cut(s)	231, 1662
Hsp92I	GRCGYC	3 cut(s)	288, 405, 587
Hsp92II	CATG	2 cut(s)	373, 1831
HspAI	GCGC	6 cut(s)	114, 205, 252, 254, 405, 806
KasI	GGCGCC	1 cut(s)	404
KspI	CCGCGG	1 cut(s)	762
Kzo9I	GATC	7 cut(s)	64, 158, 360, 1274, 1318, 1357, 1600
LmnI	GCTCC	8 cut(s)	37, 159, 384, 498, 790, 980, 1718, 1802
Lsp1109I	GCAGC	6 cut(s)	579, 625, 1219, 1228, 1288, 1471
LweI	GCATC	3 cut(s)	141, 180, 228
MaeI	CTAG	2 cut(s)	837, 1634
MaeII	ACGT	2 cut(s)	231, 1662
MaeIII	GTNAC	6 cut(s)	583, 832, 1144, 1349, 1389, 1646
MalI	GATC	7 cut(s)	66, 160, 362, 1276, 1320, 1359, 1602
MboI	GATC	7 cut(s)	64, 158, 360, 1274, 1318, 1357, 1600
MboII	GAAGA	4 cut(s)	295, 571, 609, 1355
MflI	RGATCY	1 cut(s)	1357
MhlI	GDGCHC	4 cut(s)	977, 1061, 1723, 1807
MlsI	TGGCCA	2 cut(s)	236, 1175
MluCI	AATT	6 cut(s)	564, 955, 1202, 1213, 1383, 1551
MluNI	TGGCCA	2 cut(s)	236, 1175
Mly113I	GGCGCC	1 cut(s)	405
MlyI	GAGTC	4 cut(s)	104, 362, 404, 1262
MmeI	TCCRAC	2 cut(s)	238, 423
Mox20I	TGGCCA	2 cut(s)	236, 1175
MscI	TGGCCA	2 cut(s)	236, 1175
MseI	TTAA	3 cut(s)	927, 1212, 1284
MslI	CAYNNNNRTG	2 cut(s)	482, 1002
Msp20I	TGGCCA	2 cut(s)	236, 1175
MspA1I	CMGCKG	3 cut(s)	285, 592, 761
MspI	CCGG	6 cut(s)	496, 550, 1298, 1355, 1370, 1423
MspR9I	CCNGG	9 cut(s)	122, 245, 299, 497, 674, 1355, 1414, 1423, 1800
Mva1269I	GAATGC	3 cut(s)	652, 909, 1537
MvaI	CCWGG	6 cut(s)	122, 245, 299, 674, 1414, 1800
MvnI	CGCG	5 cut(s)	62, 224, 252, 254, 761
NarI	GGCGCC	1 cut(s)	405
NciI	CCSGG	3 cut(s)	497, 1355, 1423
NdeII	GATC	7 cut(s)	64, 158, 360, 1274, 1318, 1357, 1600
NlaIII	CATG	2 cut(s)	373, 1831
NlaIV	GGNNCC	6 cut(s)	71, 380, 406, 500, 976, 1569
NmeAIII	GCCGAG	1 cut(s)	118
NmuCI	GTSAC	3 cut(s)	583, 832, 1389
NsbI	TGCGCA	1 cut(s)	807
NspV	TTCGAA	1 cut(s)	986
PaeR7I	CTCGAG	2 cut(s)	350, 1709
PauI	GCGCGC	1 cut(s)	252
PcsI	WCGNNNNNNNCGW	4 cut(s)	207, 228, 435, 1659
PctI	GAATGC	3 cut(s)	652, 909, 1537
PfeI	GAWTC	4 cut(s)	445, 709, 737, 988
PfoI	TCCNGGA	1 cut(s)	495
Ple19I	CGATCG	2 cut(s)	363, 1277
PleI	GAGTC	4 cut(s)	103, 361, 403, 1261
PluTI	GGCGCC	1 cut(s)	408
PpsI	GAGTC	4 cut(s)	103, 361, 403, 1261
Ppu21I	YACGTR	1 cut(s)	1663
PpuMI	RGGWCCY	1 cut(s)	70
PshBI	ATTAAT	1 cut(s)	927
Psp124BI	GAGCTC	2 cut(s)	1723, 1807
Psp5II	RGGWCCY	1 cut(s)	70
Psp6I	CCWGG	6 cut(s)	120, 243, 297, 672, 1412, 1798
PspEI	GGTNACC	1 cut(s)	1349
PspFI	CCCAGC	3 cut(s)	453, 905, 1450
PspGI	CCWGG	6 cut(s)	120, 243, 297, 672, 1412, 1798
PspN4I	GGNNCC	6 cut(s)	71, 380, 406, 500, 976, 1569
PspPPI	RGGWCCY	1 cut(s)	70
PspXI	VCTCGAGB	1 cut(s)	350
PstI	CTGCAG	1 cut(s)	1246
PsuI	RGATCY	1 cut(s)	1357
PteI	GCGCGC	1 cut(s)	252
PvuI	CGATCG	2 cut(s)	363, 1277
RsaI	GTAC	1 cut(s)	1705
RsaNI	GTAC	1 cut(s)	1704
RseI	CAYNNNNRTG	2 cut(s)	482, 1002
SacI	GAGCTC	2 cut(s)	1723, 1807
SacII	CCGCGG	1 cut(s)	762
SalI	GTCGAC	1 cut(s)	134
SaqAI	TTAA	3 cut(s)	927, 1212, 1284
Sau3AI	GATC	7 cut(s)	64, 158, 360, 1274, 1318, 1357, 1600
ScaI	AGTACT	1 cut(s)	1705
SchI	GAGTC	4 cut(s)	104, 362, 404, 1262
ScrFI	CCNGG	9 cut(s)	122, 245, 299, 497, 674, 1355, 1414, 1423, 1800
SduI	GDGCHC	4 cut(s)	977, 1061, 1723, 1807
SfaNI	GCATC	3 cut(s)	141, 180, 228
SfcI	CTRYAG	1 cut(s)	1242
SfiI	GGCCNNNNNGGCC	2 cut(s)	89, 233
SfoI	GGCGCC	1 cut(s)	406
Sfr274I	CTCGAG	2 cut(s)	350, 1709
Sfr303I	CCGCGG	1 cut(s)	762
SfuI	TTCGAA	1 cut(s)	986
SgrBI	CCGCGG	1 cut(s)	762
SinI	GGWCC	7 cut(s)	70, 247, 462, 499, 670, 1433, 1605
SlaI	CTCGAG	2 cut(s)	350, 1709
SmiMI	CAYNNNNRTG	2 cut(s)	482, 1002
SmlI	CTYRAG	5 cut(s)	74, 350, 596, 1079, 1709
SmoI	CTYRAG	5 cut(s)	74, 350, 596, 1079, 1709
Sse9I	AATT	6 cut(s)	564, 955, 1202, 1213, 1383, 1551
SspDI	GGCGCC	1 cut(s)	404
SspMI	CTAG	2 cut(s)	837, 1634
SstI	GAGCTC	2 cut(s)	1723, 1807
StyD4I	CCNGG	9 cut(s)	120, 243, 297, 495, 672, 1353, 1412, 1421, 1798
StyI	CCWWGG	1 cut(s)	843
TaaI	ACNGT	3 cut(s)	691, 871, 1228
TaiI	ACGT	2 cut(s)	234, 1665
TaqII	GACCGA	1 cut(s)	516
TasI	AATT	6 cut(s)	564, 955, 1202, 1213, 1383, 1551
TatI	WGTACW	1 cut(s)	1703
TfiI	GAWTC	4 cut(s)	445, 709, 737, 988
Tru1I	TTAA	3 cut(s)	927, 1212, 1284
Tru9I	TTAA	3 cut(s)	927, 1212, 1284
TscAI	CASTG	2 cut(s)	1251, 1634
TseFI	GTSAC	3 cut(s)	583, 832, 1389
TseI	GCWGC	6 cut(s)	592, 638, 1207, 1241, 1301, 1484
Tsp45I	GTSAC	3 cut(s)	583, 832, 1389
TspDTI	ATGAA	4 cut(s)	386, 647, 902, 1816
TspGWI	ACGGA	1 cut(s)	683
TspRI	CASTG	2 cut(s)	1251, 1634
VpaK11BI	GGWCC	7 cut(s)	70, 247, 462, 499, 670, 1433, 1605
VspI	ATTAAT	1 cut(s)	927
XagI	CCTNNNNNAGG	2 cut(s)	32, 296
XapI	RAATTY	1 cut(s)	955
XcmI	CCANNNNNNNNNTGG	1 cut(s)	481
XhoI	CTCGAG	2 cut(s)	350, 1709
XmiI	GTMKAC	1 cut(s)	135
XspI	CTAG	2 cut(s)	837, 1634
ZrmI	AGTACT	1 cut(s)	1705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.