FvH4_6g13340

E3 ubiquitin-protein ligase RING1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0001214
Physical Location & Seq
Forward (+)
8121318 .. 8123326
2009 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g13340.t1

Sequence Viewer

Length: 1122 bp
ATGGCTTCCATGGGCGCCTCCTACTGGTGCTACACGTGCAGCCGCATGATCCGGGTCCGGGTCCGGGCCCAAGACTCGATCTTTTGCCCCGACTGCGGCGCCGGGTTCATCGAAGAGATCCACACCCCGACCCGATCTCCTCTTAACCACCCATTTCCGGCCGCCGCGATGTTCATCGACACCACGCCGGTGTCGCAGAGCCCGAGGCTGCGGCGGAGCCAGAGGAGCAGCCGCGACCGATCTCCTTTCAACCCGGTCATTGTCCTCCGCGGCCCGCCTGATTCCGGAGCCCCGGCTACGGAGACCGACCCGGGGACGTTTGAGCTTTACTACGACGACGGAGCCGGGTTGGGGCTCCGGCCGCTGCCGTCGAGCATGTCGGATTTCTTGATGGGGTCGGGTTTCGACCGGTTGCTGCATCAGTTGACTCAATTGGAGAACGGCGTTGGGAGATTGGACCACCCGCCGGCGTCGAAGGCCGCGATCGAGTCGATGCCGGTGATTAAGATCGAGGACAGCCACGTCACGACGGAGTCGCACTGCGCGGTGTGTAAGGAGGCGTTTGAGCTTGATTCGGAGGCGCGTGAGATGCCCTGTAAGCACATTTACCATAATGATTGTATCTTTCCTTGGCTTTCGATTCGGAATTCGTGCCCGGTGTGTCGTCATCAGCTGCCGAGTGACGTCCGCGGCGGGGGTGGGAGCGGCAGTGGGAGGCCCTCGCTGGAGACTGCTCTGATTGGAGAGGAAGAGACTGTGGGATTGACTATATGGAGGTTGCCGGGAGGTGGATTCGCTGTGGGGAGGTTCACCGGAGGGAGAAGAGCTGCGGAGCGTGAGCTTCCGGTGGTGTACACTGAGATGGATGGTGGGTTTAACACGGCTGGCGGTGCTCCGAGGAGGATTTCCTGGCCATCGAGTGGAAGAAGGACAAGGGAGAGTGGTGGTTTTGCTAGAGCTTTTCGGAATTTCTTCTCATTTTTCGGGAGGCTTAGGAGCTCATCATCTTCAAGGTCGAGCTCAGAGTCTGGTTTAGGAAGAAGAAGTCGGAGCATTAGTGTGTTCAGTAGAGCGTCGCGAAGGCGGAATCAGGGCTGGGCTTTTGAAGAGGATGAGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

374

Amino Acids

40.98

Weight (kDa)

8.73

Isoelectric Point (pI)

80.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_19 PF14369 7 - 40 1e-13 zinc-ribbon
zf-rbx1 PF12678 177 - 222 2.6e-06 RING-H2 zinc finger domain
zf-RING_2 PF13639 180 - 222 7.2e-12 Ring finger domain
zf-C3HC4_2 PF13923 181 - 221 4.3e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 181 - 221 1.9e-06 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 181 - 208 4.5e-06 RING-like zinc finger
DUF1117 PF06547 253 - 360 1.7e-42 Protein of unknown function (DUF1117)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 521
AatII GACGTC 1 cut(s) 687
AccB1I GGYRCC 2 cut(s) 14, 98
AccB7I CCANNNNNTGG 1 cut(s) 920
AccBSI CCGCTC 1 cut(s) 705
AccII CGCG 8 cut(s) 167, 234, 270, 482, 545, 583, 690, 1078
AccIII TCCGGA 1 cut(s) 284
AclWI GGATC 2 cut(s) 43, 112
AcoI YGGCCR 3 cut(s) 159, 359, 911
AcsI RAATTY 2 cut(s) 646, 967
AcvI CACGTG 1 cut(s) 36
AcyI GRCGYC 4 cut(s) 15, 99, 470, 684
AfaI GTAC 1 cut(s) 854
AflIII ACRYGT 1 cut(s) 33
AgeI ACCGGT 1 cut(s) 408
AgsI TTSAA 3 cut(s) 250, 1011, 1106
AjiI CACGTC 1 cut(s) 523
AjnI CCWGG 1 cut(s) 908
AleI CACNNNNGTG 1 cut(s) 188
AluBI AGCT 8 cut(s) 325, 568, 673, 827, 841, 959, 999, 1020
AluI AGCT 8 cut(s) 325, 568, 673, 827, 841, 959, 999, 1020
Alw21I GWGCWC 3 cut(s) 895, 1001, 1022
Alw26I GTCTC 3 cut(s) 296, 722, 746
AlwI GGATC 2 cut(s) 43, 112
AlwNI CAGNNNCTG 1 cut(s) 1028
Ama87I CYCGRG 2 cut(s) 202, 310
Aor13HI TCCGGA 1 cut(s) 284
AoxI GGCC 7 cut(s) 66, 159, 271, 359, 477, 716, 911
ApaI GGGCCC 1 cut(s) 70
ApeKI GCWGC 7 cut(s) 39, 208, 228, 364, 415, 673, 827
ApoI RAATTY 2 cut(s) 646, 967
AsiGI ACCGGT 1 cut(s) 408
Asp700I GAANNNNTTC 1 cut(s) 971
AspLEI GCGC 4 cut(s) 17, 101, 545, 583
AspS9I GGNCC 7 cut(s) 55, 61, 66, 67, 272, 457, 717
AsuHPI GGTGA 2 cut(s) 511, 802
AvaI CYCGRG 2 cut(s) 202, 310
AvaII GGWCC 3 cut(s) 55, 61, 457
BaeGI GKGCMC 2 cut(s) 70, 656
BalI TGGCCA 1 cut(s) 913
BanI GGYRCC 2 cut(s) 14, 98
BanII GRGCYC 6 cut(s) 70, 203, 292, 357, 1001, 1022
BbrPI CACGTG 1 cut(s) 36
Bbv12I GWGCWC 3 cut(s) 895, 1001, 1022
BbvI GCAGC 7 cut(s) 51, 195, 240, 351, 402, 660, 814
BccI CCATC 4 cut(s) 385, 856, 860, 922
BceAI ACGGC 3 cut(s) 352, 457, 897
BciT130I CCWGG 1 cut(s) 910
BcoDI GTCTC 3 cut(s) 296, 722, 746
BfaI CTAG 1 cut(s) 954
BfoI RGCGCY 2 cut(s) 18, 102
Bme18I GGWCC 3 cut(s) 55, 61, 457
BmeT110I CYCGRG 2 cut(s) 202, 310
BmgBI CACGTC 1 cut(s) 523
BmgT120I GGNCC 7 cut(s) 55, 61, 66, 67, 272, 457, 717
BmiI GGNNCC 9 cut(s) 16, 56, 62, 68, 100, 218, 289, 343, 356
BmsI GCATC 3 cut(s) 427, 483, 579
BpmI CTGGAG 1 cut(s) 746
Bpu10I CCTNAGC 1 cut(s) 992
BsaAI YACGTR 1 cut(s) 36
BsaBI GATNNNNATC 2 cut(s) 173, 506
BsaHI GRCGYC 4 cut(s) 15, 99, 470, 684
BsaI GGTCTC 1 cut(s) 296
BsaJI CCNNGG 9 cut(s) 9, 203, 268, 291, 310, 311, 629, 688, 896
BsaWI WCCGGW 4 cut(s) 284, 408, 812, 844
BsaXI ACNNNNNCTCC 6 cut(s) 121, 151, 694, 724, 1042, 1072
Bse118I RCCGGY 4 cut(s) 187, 408, 466, 496
Bse1I ACTGG 1 cut(s) 29
Bse8I GATNNNNATC 2 cut(s) 173, 506
BseAI TCCGGA 1 cut(s) 284
BseBI CCWGG 1 cut(s) 910
BseDI CCNNGG 9 cut(s) 9, 203, 268, 291, 310, 311, 629, 688, 896
BseGI GGATG 2 cut(s) 871, 1117
BseJI GATNNNNATC 2 cut(s) 173, 506
BseMII CTCAG 2 cut(s) 849, 1035
BseNI ACTGG 1 cut(s) 29
BseRI GAGGAG 3 cut(s) 129, 238, 913
BseSI GKGCMC 2 cut(s) 70, 656
BseX3I CGGCCG 2 cut(s) 159, 359
BseXI GCAGC 7 cut(s) 51, 195, 240, 351, 402, 660, 814
BseYI CCCAGC 1 cut(s) 1095
BsgI GTGCAG 1 cut(s) 58
Bsh1236I CGCG 8 cut(s) 167, 234, 270, 482, 545, 583, 690, 1078
Bsh1285I CGRYCG 5 cut(s) 162, 238, 362, 409, 486
BshFI GGCC 7 cut(s) 68, 161, 273, 361, 479, 718, 913
BshNI GGYRCC 2 cut(s) 14, 98
BshTI ACCGGT 1 cut(s) 408
BsiEI CGRYCG 5 cut(s) 162, 238, 362, 409, 486
BsiHKAI GWGCWC 3 cut(s) 895, 1001, 1022
BsiHKCI CYCGRG 2 cut(s) 202, 310
BslFI GGGAC 1 cut(s) 328
BsmAI GTCTC 3 cut(s) 296, 722, 746
BsmFI GGGAC 1 cut(s) 328
BsnI GGCC 7 cut(s) 68, 161, 273, 361, 479, 718, 913
Bso31I GGTCTC 1 cut(s) 296
BsoBI CYCGRG 2 cut(s) 202, 310
Bsp120I GGGCCC 1 cut(s) 66
Bsp1286I GDGCHC 8 cut(s) 70, 203, 292, 357, 656, 895, 1001, 1022
Bsp13I TCCGGA 1 cut(s) 284
Bsp1407I TGTACA 1 cut(s) 852
Bsp143I GATC 7 cut(s) 48, 78, 117, 134, 239, 483, 507
Bsp19I CCATGG 1 cut(s) 9
Bsp68I TCGCGA 1 cut(s) 1078
BspANI GGCC 7 cut(s) 68, 161, 273, 361, 479, 718, 913
BspCNI CTCAG 2 cut(s) 850, 1034
BspEI TCCGGA 1 cut(s) 284
BspFNI CGCG 8 cut(s) 167, 234, 270, 482, 545, 583, 690, 1078
BspLI GGNNCC 9 cut(s) 16, 56, 62, 68, 100, 218, 289, 343, 356
BspPI GGATC 2 cut(s) 43, 112
BspQI GCTCTTC 1 cut(s) 817
BspT107I GGYRCC 2 cut(s) 14, 98
BspTNI GGTCTC 1 cut(s) 296
BsrBI CCGCTC 1 cut(s) 705
BsrFI RCCGGY 4 cut(s) 187, 408, 466, 496
BsrGI TGTACA 1 cut(s) 852
BsrI ACTGG 1 cut(s) 29
BssAI RCCGGY 4 cut(s) 187, 408, 466, 496
BssECI CCNNGG 9 cut(s) 9, 203, 268, 291, 310, 311, 629, 688, 896
BssMI GATC 7 cut(s) 48, 78, 117, 134, 239, 483, 507
BssNI GRCGYC 4 cut(s) 15, 99, 470, 684
BssT1I CCWWGG 2 cut(s) 9, 629
Bst2UI CCWGG 1 cut(s) 910
Bst4CI ACNGT 1 cut(s) 757
Bst6I CTCTTC 4 cut(s) 108, 744, 817, 1101
BstACI GRCGYC 4 cut(s) 15, 99, 470, 684
BstAUI TGTACA 1 cut(s) 852
BstBAI YACGTR 1 cut(s) 36
BstC8I GCNNGC 3 cut(s) 275, 468, 886
BstDEI CTNAG 3 cut(s) 858, 992, 1021
BstDSI CCRYGG 3 cut(s) 9, 268, 688
BstF5I GGATG 2 cut(s) 871, 1117
BstFNI CGCG 8 cut(s) 167, 234, 270, 482, 545, 583, 690, 1078
BstH2I RGCGCY 2 cut(s) 18, 102
BstHHI GCGC 4 cut(s) 17, 101, 545, 583
BstKTI GATC 7 cut(s) 51, 81, 120, 137, 242, 486, 510
BstMAI GTCTC 3 cut(s) 296, 722, 746
BstMBI GATC 7 cut(s) 48, 78, 117, 134, 239, 483, 507
BstMCI CGRYCG 5 cut(s) 162, 238, 362, 409, 486
BstMWI GCNNNNNNNGC 9 cut(s) 36, 93, 193, 225, 361, 476, 589, 598, 890
BstNI CCWGG 1 cut(s) 910
BstNSI RCATGY 1 cut(s) 379
BstSLI GKGCMC 2 cut(s) 70, 656
BstUI CGCG 8 cut(s) 167, 234, 270, 482, 545, 583, 690, 1078
BstV1I GCAGC 7 cut(s) 51, 195, 240, 351, 402, 660, 814
BstX2I RGATCY 1 cut(s) 117
BstYI RGATCY 1 cut(s) 117
BstZI CGGCCG 2 cut(s) 159, 359
BsuRI GGCC 7 cut(s) 68, 161, 273, 361, 479, 718, 913
BtgI CCRYGG 3 cut(s) 9, 268, 688
BtgZI GCGATG 1 cut(s) 182
BtrI CACGTC 1 cut(s) 523
BtsCI GGATG 2 cut(s) 871, 1117
BtsI GCAGTG 2 cut(s) 538, 715
BtsIMutI CAGTG 3 cut(s) 538, 715, 855
BtuMI TCGCGA 1 cut(s) 1078
Cac8I GCNNGC 3 cut(s) 275, 468, 886
CaiI CAGNNNCTG 1 cut(s) 1028
CfoI GCGC 4 cut(s) 17, 101, 545, 583
Cfr10I RCCGGY 4 cut(s) 187, 408, 466, 496
Cfr13I GGNCC 7 cut(s) 55, 61, 66, 67, 272, 457, 717
Cfr42I CCGCGG 2 cut(s) 271, 691
Cfr9I CCCGGG 1 cut(s) 310
CseI GACGC 2 cut(s) 459, 1062
Csp6I GTAC 1 cut(s) 853
CspAI ACCGGT 1 cut(s) 408
CviAII CATG 3 cut(s) 10, 46, 376
CviQI GTAC 1 cut(s) 853
DdeI CTNAG 3 cut(s) 858, 992, 1021
DinI GGCGCC 2 cut(s) 16, 100
DpnI GATC 7 cut(s) 50, 80, 119, 136, 241, 485, 509
DpnII GATC 7 cut(s) 48, 78, 117, 134, 239, 483, 507
DrdI GACNNNNNNGTC 1 cut(s) 521
DseDI GACNNNNNNGTC 1 cut(s) 521
EaeI YGGCCR 3 cut(s) 159, 359, 911
EagI CGGCCG 2 cut(s) 159, 359
Eam1104I CTCTTC 4 cut(s) 108, 744, 817, 1101
EarI CTCTTC 4 cut(s) 108, 744, 817, 1101
EciI GGCGGA 2 cut(s) 229, 1099
Ecl136II GAGCTC 2 cut(s) 999, 1020
EclXI CGGCCG 2 cut(s) 159, 359
Eco130I CCWWGG 2 cut(s) 9, 629
Eco24I GRGCYC 6 cut(s) 70, 203, 292, 357, 1001, 1022
Eco31I GGTCTC 1 cut(s) 296
Eco47I GGWCC 3 cut(s) 55, 61, 457
Eco52I CGGCCG 2 cut(s) 159, 359
Eco53kI GAGCTC 2 cut(s) 999, 1020
Eco72I CACGTG 1 cut(s) 36
Eco88I CYCGRG 2 cut(s) 202, 310
EcoICRI GAGCTC 2 cut(s) 999, 1020
EcoO109I RGGNCCY 1 cut(s) 717
EcoRI GAATTC 1 cut(s) 646
EcoRII CCWGG 1 cut(s) 908
EcoT14I CCWWGG 2 cut(s) 9, 629
EcoT38I GRGCYC 6 cut(s) 70, 203, 292, 357, 1001, 1022
EgeI GGCGCC 2 cut(s) 16, 100
EheI GGCGCC 2 cut(s) 16, 100
ErhI CCWWGG 2 cut(s) 9, 629
FaeI CATG 3 cut(s) 13, 49, 379
FaiI YATR 6 cut(s) 11, 47, 377, 612, 770, 772
FaqI GGGAC 1 cut(s) 328
FatI CATG 3 cut(s) 9, 45, 375
FauI CCCGC 3 cut(s) 282, 471, 686
FokI GGATG 1 cut(s) 878
FriOI GRGCYC 6 cut(s) 70, 203, 292, 357, 1001, 1022
FspBI CTAG 1 cut(s) 954
GlaI GCGC 4 cut(s) 16, 100, 544, 582
GsaI CCCAGC 1 cut(s) 1099
GsuI CTGGAG 1 cut(s) 746
HaeII RGCGCY 2 cut(s) 18, 102
HaeIII GGCC 7 cut(s) 68, 161, 273, 361, 479, 718, 913
HgaI GACGC 2 cut(s) 459, 1062
HhaI GCGC 4 cut(s) 17, 101, 545, 583
Hin1I GRCGYC 4 cut(s) 15, 99, 470, 684
Hin1II CATG 3 cut(s) 13, 49, 379
Hin6I GCGC 4 cut(s) 15, 99, 543, 581
HinP1I GCGC 4 cut(s) 15, 99, 543, 581
HincII GTYRAC 1 cut(s) 426
HindII GTYRAC 1 cut(s) 426
HphI GGTGA 2 cut(s) 511, 802
Hpy166II GTNNAC 4 cut(s) 426, 810, 853, 855
Hpy188I TCNGA 8 cut(s) 382, 577, 645, 738, 897, 966, 1024, 1050
Hpy188III TCNNGA 5 cut(s) 285, 388, 526, 985, 1077
Hpy8I GTNNAC 4 cut(s) 426, 810, 853, 855
Hpy99I CGWCG 6 cut(s) 338, 341, 373, 475, 532, 1078
HpyAV CCTTC 3 cut(s) 469, 921, 1074
HpyCH4III ACNGT 1 cut(s) 757
HpyCH4IV ACGT 4 cut(s) 35, 317, 522, 684
HpyCH4V TGCA 2 cut(s) 39, 418
HpyF10VI GCNNNNNNNGC 9 cut(s) 36, 93, 193, 225, 361, 476, 589, 598, 890
HpyF3I CTNAG 3 cut(s) 858, 992, 1021
HpySE526I ACGT 4 cut(s) 35, 317, 522, 684
Hsp92I GRCGYC 4 cut(s) 15, 99, 470, 684
Hsp92II CATG 3 cut(s) 13, 49, 379
HspAI GCGC 4 cut(s) 15, 99, 543, 581
KasI GGCGCC 2 cut(s) 14, 98
Kpn2I TCCGGA 1 cut(s) 284
KroI GCCGGC 1 cut(s) 466
KroNI GCCGGC 1 cut(s) 468
KspI CCGCGG 2 cut(s) 271, 691
Kzo9I GATC 7 cut(s) 48, 78, 117, 134, 239, 483, 507
LguI GCTCTTC 1 cut(s) 817
Lsp1109I GCAGC 7 cut(s) 51, 195, 240, 351, 402, 660, 814
LweI GCATC 3 cut(s) 427, 483, 579
MaeI CTAG 1 cut(s) 954
MaeII ACGT 4 cut(s) 35, 317, 522, 684
MaeIII GTNAC 2 cut(s) 523, 680
MalI GATC 7 cut(s) 50, 80, 119, 136, 241, 485, 509
MbiI CCGCTC 1 cut(s) 705
MboI GATC 7 cut(s) 48, 78, 117, 134, 239, 483, 507
MboII GAAGA 9 cut(s) 125, 761, 834, 936, 964, 999, 1050, 1053, 1118
MfeI CAATTG 1 cut(s) 431
MflI RGATCY 1 cut(s) 117
MhlI GDGCHC 8 cut(s) 70, 203, 292, 357, 656, 895, 1001, 1022
MlsI TGGCCA 1 cut(s) 913
MluCI AATT 3 cut(s) 431, 646, 967
MluNI TGGCCA 1 cut(s) 913
Mly113I GGCGCC 2 cut(s) 15, 99
MlyI GAGTC 5 cut(s) 68, 421, 497, 542, 1034
MmeI TCCRAC 2 cut(s) 360, 1028
Mox20I TGGCCA 1 cut(s) 913
MreI CGCCGGCG 1 cut(s) 466
MroI TCCGGA 1 cut(s) 284
MroNI GCCGGC 1 cut(s) 466
MroXI GAANNNNTTC 1 cut(s) 971
MscI TGGCCA 1 cut(s) 913
MseI TTAA 3 cut(s) 144, 504, 876
MslI CAYNNNNRTG 3 cut(s) 188, 860, 1058
Msp20I TGGCCA 1 cut(s) 913
MspA1I CMGCKG 4 cut(s) 270, 364, 673, 690
MunI CAATTG 1 cut(s) 431
MvaI CCWGG 1 cut(s) 910
MvnI CGCG 8 cut(s) 167, 234, 270, 482, 545, 583, 690, 1078
MwoI GCNNNNNNNGC 9 cut(s) 36, 93, 193, 225, 361, 476, 589, 598, 890
NaeI GCCGGC 1 cut(s) 468
NarI GGCGCC 2 cut(s) 15, 99
NcoI CCATGG 1 cut(s) 9
NdeII GATC 7 cut(s) 48, 78, 117, 134, 239, 483, 507
NgoMIV GCCGGC 1 cut(s) 466
NlaIII CATG 3 cut(s) 13, 49, 379
NlaIV GGNNCC 9 cut(s) 16, 56, 62, 68, 100, 218, 289, 343, 356
NmeAIII GCCGAG 1 cut(s) 702
NmuCI GTSAC 2 cut(s) 523, 680
NruI TCGCGA 1 cut(s) 1078
NspI RCATGY 1 cut(s) 379
OliI CACNNNNGTG 1 cut(s) 188
PciSI GCTCTTC 1 cut(s) 817
PcsI WCGNNNNNNNCGW 2 cut(s) 200, 479
PdiI GCCGGC 1 cut(s) 468
PdmI GAANNNNTTC 1 cut(s) 971
PfeI GAWTC 5 cut(s) 281, 572, 640, 792, 1087
PflFI GACNNNGTC 1 cut(s) 532
PflMI CCANNNNNTGG 1 cut(s) 920
PinAI ACCGGT 1 cut(s) 408
Ple19I CGATCG 1 cut(s) 486
PleI GAGTC 5 cut(s) 68, 421, 496, 541, 1033
PluTI GGCGCC 2 cut(s) 18, 102
PmaCI CACGTG 1 cut(s) 36
PmlI CACGTG 1 cut(s) 36
PpsI GAGTC 5 cut(s) 68, 421, 496, 541, 1033
Ppu21I YACGTR 1 cut(s) 36
Psp124BI GAGCTC 2 cut(s) 1001, 1022
Psp6I CCWGG 1 cut(s) 908
PspCI CACGTG 1 cut(s) 36
PspFI CCCAGC 1 cut(s) 1095
PspGI CCWGG 1 cut(s) 908
PspN4I GGNNCC 9 cut(s) 16, 56, 62, 68, 100, 218, 289, 343, 356
PspOMI GGGCCC 1 cut(s) 66
PspPI GGNCC 7 cut(s) 55, 61, 66, 67, 272, 457, 717
PstNI CAGNNNCTG 1 cut(s) 1028
PsuI RGATCY 1 cut(s) 117
PsyI GACNNNGTC 1 cut(s) 532
PvuI CGATCG 1 cut(s) 486
PvuII CAGCTG 1 cut(s) 673
RruI TCGCGA 1 cut(s) 1078
RsaI GTAC 1 cut(s) 854
RsaNI GTAC 1 cut(s) 853
RseI CAYNNNNRTG 3 cut(s) 188, 860, 1058
SacI GAGCTC 2 cut(s) 1001, 1022
SacII CCGCGG 2 cut(s) 271, 691
SapI GCTCTTC 1 cut(s) 817
SaqAI TTAA 3 cut(s) 144, 504, 876
Sau3AI GATC 7 cut(s) 48, 78, 117, 134, 239, 483, 507
Sau96I GGNCC 7 cut(s) 55, 61, 66, 67, 272, 457, 717
SchI GAGTC 5 cut(s) 68, 421, 497, 542, 1034
SduI GDGCHC 8 cut(s) 70, 203, 292, 357, 656, 895, 1001, 1022
SfaNI GCATC 3 cut(s) 427, 483, 579
SfoI GGCGCC 2 cut(s) 16, 100
Sfr303I CCGCGG 2 cut(s) 271, 691
SgrAI CRCCGGYG 2 cut(s) 187, 466
SgrBI CCGCGG 2 cut(s) 271, 691
SinI GGWCC 3 cut(s) 55, 61, 457
SmaI CCCGGG 1 cut(s) 312
SmiMI CAYNNNNRTG 3 cut(s) 188, 860, 1058
Sse9I AATT 3 cut(s) 431, 646, 967
SspDI GGCGCC 2 cut(s) 14, 98
SspMI CTAG 1 cut(s) 954
SstI GAGCTC 2 cut(s) 1001, 1022
StyI CCWWGG 2 cut(s) 9, 629
TaaI ACNGT 1 cut(s) 757
TaiI ACGT 4 cut(s) 38, 320, 525, 687
TaqII GACCGA 2 cut(s) 252, 320
TasI AATT 3 cut(s) 431, 646, 967
TatI WGTACW 1 cut(s) 852
TfiI GAWTC 5 cut(s) 281, 572, 640, 792, 1087
Tru1I TTAA 3 cut(s) 144, 504, 876
Tru9I TTAA 3 cut(s) 144, 504, 876
TscAI CASTG 3 cut(s) 545, 715, 862
TseFI GTSAC 2 cut(s) 523, 680
TseI GCWGC 7 cut(s) 39, 208, 228, 364, 415, 673, 827
Tsp45I GTSAC 2 cut(s) 523, 680
TspDTI ATGAA 2 cut(s) 97, 163
TspGWI ACGGA 3 cut(s) 314, 354, 545
TspMI CCCGGG 1 cut(s) 310
TspRI CASTG 3 cut(s) 545, 715, 862
Tth111I GACNNNGTC 1 cut(s) 532
Van91I CCANNNNNTGG 1 cut(s) 920
VpaK11BI GGWCC 3 cut(s) 55, 61, 457
XapI RAATTY 2 cut(s) 646, 967
XceI RCATGY 1 cut(s) 379
XmaI CCCGGG 1 cut(s) 310
XmnI GAANNNNTTC 1 cut(s) 971
XspI CTAG 1 cut(s) 954
ZraI GACGTC 1 cut(s) 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.