Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0001214

Physical Location & Seq

Genomic Coordinates Forward (+)

8005944 .. 8007082

Gene Structure 1139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1096200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1101 bp

ATGGCCATGCCATCGCCGCCGCCGACGGCGTCGTATTGGTGCTACAGATGCACTCGCTTCGTCCGAGTGTTTGCCCTGGACTCCGCCCTCTCGTGCCCCCACTGCGAAACCGGCTTCCTCGAGGAGATCGAGACGATGCCCCAGCCGCTGCCGCAGCCGAACTATCTCCGCCGTAGATTCCCGTCATCTCACCGCCACGATGATGAACCGGGTCAAACCCCGACTCCTGCATCTCGCCGGGTCCGACGAGCATCCGGCGACCGGTCGTCACCTTTTAACCCGGTCATCGTTCTACGTGGCACTGAAGCCAATACCGATTCCAACTCATTCGAACTCTACTACGACGACGCTACCGGGTCGGGGCTCCGTCCCCTCCCGCCCACCATGTCCGAGTTTTTAATGGGCTCGGGATTCGACCGTTTACTCGACCAGCTTTCCCAGATCGAAATCACCGGTTTGGGCCGACCCGAAAACCCGCCCGCATCTAAGTCCGCCGTGGAATCTATGCCCGTTATTCTAATCGCCGAAACTCACGTCGTTTCGGATTCACACTGCGCCGTCTGCAAAGAAGCATTCGAACTCGGGTCGGAGGCCCGGGAAATGCCGTGCAAGCACATATACCACCCGGATTGCATCCTTCCCTGGCTCTCGATGCGAAACTCCTGCCCGGTTTGCCGACACGAGCTACCCGCTGACCAAAACAACCGTAATTCGGATCCGGGTCTCGAGGAAGAGGCCATGGGGTTGACAATCTGGAGATTACCCGGCGGCGGTTTCGCCGTGGGGAGGTTCTCCGGCGGCAGAAGACCCGGCGAGAGGGAATTACCGGTTGTGTACACGGAAATGGACGGCGGGTTCAATGGAAACGGGGCTCCGAGAAGGGTACTATGGGCATCGAGGAGTAGAGGGAGCGAAAGGGTTGGGATTCGGAGGGCTTTTCGTAATATAGCTTCGTTCTGGGGGCGATTACGTACCAATTCATCGTCTTCGAGGTCCGGTTCGGATTCTGAACCCGGGTCGGGTTTGACTAGAAGTCAGTCAAGTTCGGTGTTTGGGCGGTTCGTAAACCGGCGTGGCAGGGCGTGGGCGTTGGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010035 GO:0010154 GO:0010200 GO:0010243 GO:0010498 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0022412 GO:0022414 GO:0030154 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051603 GO:0051865 GO:0060560 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0097305 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

367

Amino Acids

40.58

Weight (kDa)

8.06

Isoelectric Point (pI)

79.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	11 - 43	3.9e-13	zinc-ribbon
zf-RING_2	PF13639	184 - 226	4.4e-12	Ring finger domain
zf-C3HC4_2	PF13923	185 - 225	1e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	185 - 212	1.6e-06	RING-like zinc finger
zf-C3HC4	PF00097	185 - 225	7.6e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	185 - 226	8.1e-06	RING-H2 zinc finger domain
DUF1117	PF06547	247 - 353	4.2e-37	Protein of unknown function (DUF1117)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39720 AT2G39720 AT3G46620 AT5G59550 AT5G59550
fragaria_vesca	FvH4_3g36860 FvH4_6g13340 FvH4_7g22850
malus_domestica	MD01G1136700.v1.1 MD03G1087100.v1.1 MD04G1131800.v1.1 MD07G1201700.v1.1 MD10G1074300.v1.1 MD11G1012900.v1.1 MD11G1096200.v1.1 MD12G1144900.v1.1
prunus_persica	Prupe.2G238300_v2.0.a1 Prupe.6G071800_v2.0.a1 Prupe.6G258400_v2.0.a1
pyrus_communis	pycom01g15740 pycom03g06910 pycom04g11990 pycom07g18870 pycom11g08150 pycom12g13930
rosa_chinensis	RchiOBHm_Chr1g0368011 RchiOBHm_Chr3g0466231 RchiOBHm_Chr5g0066071
rosa_laevigata	RLG00000024595 RLG00000027247 RLG00000035839
rosa_multiflora	Rmu_co8242689.1_g000001 Rmu_co8418295.1_g000001 Rmu_sc0000350.1_g000012 Rmu_sc0002406.1_g000005 Rmu_sc0005240.1_g000003 Rmu_sc0005240.1_g000004
rosa_roxburghii	Rroxscaffold_1G00014940 Rroxscaffold_4G00288940 Rroxscaffold_6G00414710
rosa_rugosa	Rorug01G0338400 Rorug03G0080500 Rorug05G0376200
rosa_samantha	Rh1AG345200 Rh1BG307500 Rh1CG323100 Rh1DG339600 Rh3BG147700 Rh3DG148400 Rh5AG434600 Rh5BG450900 Rh5CG473200 Rh5DG464500
rosa_wichuraiana	Rw1G030720 Rw3G011940 Rw5G040700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	119
AclWI	GGATC	2 cut(s)	710, 723
AcoI	YGGCCR	1 cut(s)	3
AcuI	CTGAAG	1 cut(s)	324
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	3 cut(s)	836, 885, 973
AfiI	CCNNNNNNNGG	7 cut(s)	261, 360, 712, 770, 786, 816, 1019
AgeI	ACCGGT	3 cut(s)	261, 452, 826
AgsI	TTSAA	1 cut(s)	859
AhdI	GACNNNNNGTC	2 cut(s)	265, 1032
AjiI	CACGTC	1 cut(s)	535
AjnI	CCWGG	2 cut(s)	75, 641
AloI	GAACNNNNNNTCC	2 cut(s)	839, 871
AluBI	AGCT	3 cut(s)	433, 685, 950
AluI	AGCT	3 cut(s)	433, 685, 950
Alw26I	GTCTC	2 cut(s)	125, 728
AlwI	GGATC	2 cut(s)	710, 723
AlwNI	CAGNNNCTG	1 cut(s)	148
Ama87I	CYCGRG	6 cut(s)	119, 406, 581, 594, 725, 1013
AoxI	GGCC	4 cut(s)	3, 460, 591, 735
ApeKI	GCWGC	2 cut(s)	148, 154
ArsI	GACNNNNNNTTYG	2 cut(s)	519, 551
AsiGI	ACCGGT	3 cut(s)	261, 452, 826
AspLEI	GCGC	1 cut(s)	557
AspS9I	GGNCC	4 cut(s)	241, 460, 592, 993
AsuHPI	GGTGA	3 cut(s)	182, 261, 442
AsuII	TTCGAA	2 cut(s)	330, 576
AvaI	CYCGRG	6 cut(s)	119, 406, 581, 594, 725, 1013
AvaII	GGWCC	2 cut(s)	241, 993
BaeGI	GKGCMC	1 cut(s)	98
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	715
BanII	GRGCYC	3 cut(s)	366, 407, 874
BarI	GAAGNNNNNNTAC	2 cut(s)	934, 966
BauI	CACGAG	2 cut(s)	91, 680
BbsI	GAAGAC	2 cut(s)	811, 978
BbvI	GCAGC	2 cut(s)	135, 166
BccI	CCATC	1 cut(s)	19
BceAI	ACGGC	7 cut(s)	42, 156, 479, 542, 589, 764, 865
BcgI	CGANNNNNNTGC	4 cut(s)	40, 74, 645, 679
BciT130I	CCWGG	2 cut(s)	77, 643
BcoDI	GTCTC	2 cut(s)	125, 728
BfaI	CTAG	1 cut(s)	1029
BfmI	CTRYAG	1 cut(s)	43
BisI	GCNGC	8 cut(s)	17, 20, 146, 149, 152, 155, 769, 799
BlsI	GCNGC	8 cut(s)	18, 21, 147, 150, 153, 156, 770, 800
Bme18I	GGWCC	2 cut(s)	241, 993
BmeRI	GACNNNNNGTC	2 cut(s)	265, 1032
BmeT110I	CYCGRG	6 cut(s)	119, 406, 581, 594, 725, 1013
BmgBI	CACGTC	1 cut(s)	535
BmgT120I	GGNCC	4 cut(s)	241, 460, 592, 993
BmiI	GGNNCC	4 cut(s)	242, 365, 717, 873
BmsI	GCATC	8 cut(s)	38, 126, 239, 260, 491, 642, 642, 902
BpiI	GAAGAC	2 cut(s)	811, 978
BpmI	CTGGAG	1 cut(s)	775
Bpu14I	TTCGAA	2 cut(s)	330, 576
BsaAI	YACGTR	2 cut(s)	296, 971
BsaBI	GATNNNNATC	1 cut(s)	446
BsaHI	GRCGYC	1 cut(s)	29
BsaI	GGTCTC	1 cut(s)	728
BsaJI	CCNNGG	7 cut(s)	75, 495, 594, 641, 738, 780, 1013
BsaWI	WCCGGW	4 cut(s)	261, 452, 826, 995
BsaXI	ACNNNNNCTCC	2 cut(s)	208, 238
Bsc4I	CCNNNNNNNGG	7 cut(s)	261, 360, 712, 770, 786, 816, 1019
Bse118I	RCCGGY	5 cut(s)	110, 261, 452, 826, 1068
Bse8I	GATNNNNATC	1 cut(s)	446
BseBI	CCWGG	2 cut(s)	77, 643
BseDI	CCNNGG	7 cut(s)	75, 495, 594, 641, 738, 780, 1013
BseGI	GGATG	3 cut(s)	251, 633, 1099
BseJI	GATNNNNATC	1 cut(s)	446
BseLI	CCNNNNNNNGG	7 cut(s)	261, 360, 712, 770, 786, 816, 1019
BseRI	GAGGAG	2 cut(s)	137, 913
BseSI	GKGCMC	1 cut(s)	98
BseXI	GCAGC	2 cut(s)	135, 166
BseYI	CCCAGC	1 cut(s)	141
Bsh1285I	CGRYCG	3 cut(s)	262, 266, 418
BshFI	GGCC	4 cut(s)	5, 462, 593, 737
BshTI	ACCGGT	3 cut(s)	261, 452, 826
BsiEI	CGRYCG	3 cut(s)	262, 266, 418
BsiHKCI	CYCGRG	6 cut(s)	119, 406, 581, 594, 725, 1013
BslFI	GGGAC	1 cut(s)	354
BslI	CCNNNNNNNGG	7 cut(s)	261, 360, 712, 770, 786, 816, 1019
BsmAI	GTCTC	2 cut(s)	125, 728
BsmBI	CGTCTC	1 cut(s)	125
BsmFI	GGGAC	1 cut(s)	354
BsmI	GAATGC	1 cut(s)	572
BsnI	GGCC	4 cut(s)	5, 462, 593, 737
Bso31I	GGTCTC	1 cut(s)	728
BsoBI	CYCGRG	6 cut(s)	119, 406, 581, 594, 725, 1013
Bsp119I	TTCGAA	2 cut(s)	330, 576
Bsp1286I	GDGCHC	4 cut(s)	98, 366, 407, 874
Bsp1407I	TGTACA	1 cut(s)	834
Bsp143I	GATC	3 cut(s)	126, 441, 715
Bsp19I	CCATGG	1 cut(s)	738
BspANI	GGCC	4 cut(s)	5, 462, 593, 737
BspLI	GGNNCC	4 cut(s)	242, 365, 717, 873
BspPI	GGATC	2 cut(s)	710, 723
BspT104I	TTCGAA	2 cut(s)	330, 576
BspTNI	GGTCTC	1 cut(s)	728
BsrFI	RCCGGY	5 cut(s)	110, 261, 452, 826, 1068
BsrGI	TGTACA	1 cut(s)	834
BssAI	RCCGGY	5 cut(s)	110, 261, 452, 826, 1068
BssECI	CCNNGG	7 cut(s)	75, 495, 594, 641, 738, 780, 1013
BssMI	GATC	3 cut(s)	126, 441, 715
BssNI	GRCGYC	1 cut(s)	29
BssSI	CACGAG	2 cut(s)	91, 680
BssT1I	CCWWGG	1 cut(s)	738
Bst2BI	CACGAG	2 cut(s)	91, 680
Bst2UI	CCWGG	2 cut(s)	77, 643
Bst4CI	ACNGT	2 cut(s)	419, 707
Bst6I	CTCTTC	1 cut(s)	726
BstACI	GRCGYC	1 cut(s)	29
BstAUI	TGTACA	1 cut(s)	834
BstBAI	YACGTR	2 cut(s)	296, 971
BstBI	TTCGAA	2 cut(s)	330, 576
BstC8I	GCNNGC	2 cut(s)	480, 611
BstDEI	CTNAG	1 cut(s)	486
BstDSI	CCRYGG	3 cut(s)	495, 738, 780
BstF5I	GGATG	3 cut(s)	251, 633, 1099
BstHHI	GCGC	1 cut(s)	557
BstKTI	GATC	3 cut(s)	129, 444, 718
BstMAI	GTCTC	2 cut(s)	125, 728
BstMBI	GATC	3 cut(s)	126, 441, 715
BstMCI	CGRYCG	3 cut(s)	262, 266, 418
BstNI	CCWGG	2 cut(s)	77, 643
BstSFI	CTRYAG	1 cut(s)	43
BstSLI	GKGCMC	1 cut(s)	98
BstSNI	TACGTA	1 cut(s)	971
BstV1I	GCAGC	2 cut(s)	135, 166
BstV2I	GAAGAC	2 cut(s)	811, 978
BstX2I	RGATCY	1 cut(s)	715
BstYI	RGATCY	1 cut(s)	715
BsuRI	GGCC	4 cut(s)	5, 462, 593, 737
BtgI	CCRYGG	3 cut(s)	495, 738, 780
BtrI	CACGTC	1 cut(s)	535
BtsCI	GGATG	3 cut(s)	251, 633, 1099
BtsI	GCAGTG	2 cut(s)	100, 550
BtsIMutI	CAGTG	3 cut(s)	100, 300, 550
Cac8I	GCNNGC	2 cut(s)	480, 611
CaiI	CAGNNNCTG	1 cut(s)	148
CfoI	GCGC	1 cut(s)	557
Cfr10I	RCCGGY	5 cut(s)	110, 261, 452, 826, 1068
Cfr13I	GGNCC	4 cut(s)	241, 460, 592, 993
Cfr9I	CCCGGG	2 cut(s)	594, 1013
CseI	GACGC	2 cut(s)	18, 356
Csp6I	GTAC	3 cut(s)	835, 884, 972
CspAI	ACCGGT	3 cut(s)	261, 452, 826
CspCI	CAANNNNNGTGG	2 cut(s)	611, 646
CviAII	CATG	3 cut(s)	7, 385, 739
CviQI	GTAC	3 cut(s)	835, 884, 972
DdeI	CTNAG	1 cut(s)	486
DpnI	GATC	3 cut(s)	128, 443, 717
DpnII	GATC	3 cut(s)	126, 441, 715
DriI	GACNNNNNGTC	2 cut(s)	265, 1032
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	726
Eam1105I	GACNNNNNGTC	2 cut(s)	265, 1032
EarI	CTCTTC	1 cut(s)	726
EciI	GGCGGA	3 cut(s)	73, 158, 481
Eco105I	TACGTA	1 cut(s)	971
Eco130I	CCWWGG	1 cut(s)	738
Eco24I	GRGCYC	3 cut(s)	366, 407, 874
Eco31I	GGTCTC	1 cut(s)	728
Eco47I	GGWCC	2 cut(s)	241, 993
Eco57I	CTGAAG	1 cut(s)	324
Eco88I	CYCGRG	6 cut(s)	119, 406, 581, 594, 725, 1013
EcoRII	CCWGG	2 cut(s)	75, 641
EcoT14I	CCWWGG	1 cut(s)	738
EcoT38I	GRGCYC	3 cut(s)	366, 407, 874
ErhI	CCWWGG	1 cut(s)	738
Esp3I	CGTCTC	1 cut(s)	125
FaeI	CATG	3 cut(s)	10, 388, 742
FaiI	YATR	8 cut(s)	8, 386, 506, 617, 619, 740, 889, 947
FaqI	GGGAC	1 cut(s)	354
FatI	CATG	3 cut(s)	6, 384, 738
FauI	CCCGC	5 cut(s)	384, 483, 487, 697, 845
Fnu4HI	GCNGC	8 cut(s)	17, 20, 146, 149, 152, 155, 769, 799
FokI	GGATG	2 cut(s)	238, 620
FriOI	GRGCYC	3 cut(s)	366, 407, 874
Fsp4HI	GCNGC	8 cut(s)	17, 20, 146, 149, 152, 155, 769, 799
FspBI	CTAG	1 cut(s)	1029
GlaI	GCGC	1 cut(s)	556
GluI	GCNGC	8 cut(s)	17, 20, 146, 149, 152, 155, 769, 799
GsaI	CCCAGC	1 cut(s)	145
GsuI	CTGGAG	1 cut(s)	775
HaeIII	GGCC	4 cut(s)	5, 462, 593, 737
HgaI	GACGC	2 cut(s)	18, 356
HhaI	GCGC	1 cut(s)	557
Hin1I	GRCGYC	1 cut(s)	29
Hin1II	CATG	3 cut(s)	10, 388, 742
Hin6I	GCGC	1 cut(s)	555
HinP1I	GCGC	1 cut(s)	555
HincII	GTYRAC	1 cut(s)	747
HindII	GTYRAC	1 cut(s)	747
HinfI	GANTC	9 cut(s)	80, 177, 223, 317, 411, 500, 545, 925, 1004
HphI	GGTGA	3 cut(s)	182, 261, 442
Hpy166II	GTNNAC	5 cut(s)	422, 747, 835, 837, 1066
Hpy188III	TCNNGA	5 cut(s)	130, 408, 649, 725, 754
Hpy8I	GTNNAC	5 cut(s)	422, 747, 835, 837, 1066
Hpy99I	CGWCG	6 cut(s)	28, 34, 249, 347, 350, 539
HpyAV	CCTTC	2 cut(s)	647, 873
HpyCH4III	ACNGT	2 cut(s)	419, 707
HpyCH4IV	ACGT	3 cut(s)	295, 534, 970
HpyCH4V	TGCA	5 cut(s)	51, 230, 564, 609, 633
HpyF3I	CTNAG	1 cut(s)	486
HpySE526I	ACGT	3 cut(s)	295, 534, 970
Hsp92I	GRCGYC	1 cut(s)	29
Hsp92II	CATG	3 cut(s)	10, 388, 742
HspAI	GCGC	1 cut(s)	555
Kzo9I	GATC	3 cut(s)	126, 441, 715
LmnI	GCTCC	3 cut(s)	369, 877, 909
Lsp1109I	GCAGC	2 cut(s)	135, 166
LweI	GCATC	8 cut(s)	38, 126, 239, 260, 491, 642, 642, 902
MaeI	CTAG	1 cut(s)	1029
MaeII	ACGT	3 cut(s)	295, 534, 970
MaeIII	GTNAC	1 cut(s)	267
MalI	GATC	3 cut(s)	128, 443, 717
MboI	GATC	3 cut(s)	126, 441, 715
MboII	GAAGA	3 cut(s)	743, 816, 978
MflI	RGATCY	1 cut(s)	715
MhlI	GDGCHC	4 cut(s)	98, 366, 407, 874
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	3 cut(s)	709, 821, 976
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	74, 217
MmeI	TCCRAC	4 cut(s)	268, 345, 567, 1071
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	276, 398
MslI	CAYNNNNRTG	2 cut(s)	201, 842
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	148, 692
Mva1269I	GAATGC	1 cut(s)	572
MvaI	CCWGG	2 cut(s)	77, 643
NcoI	CCATGG	1 cut(s)	738
NdeII	GATC	3 cut(s)	126, 441, 715
NlaIII	CATG	3 cut(s)	10, 388, 742
NlaIV	GGNNCC	4 cut(s)	242, 365, 717, 873
NmuCI	GTSAC	1 cut(s)	267
NspV	TTCGAA	2 cut(s)	330, 576
PaeR7I	CTCGAG	2 cut(s)	119, 725
PcsI	WCGNNNNNNNCGW	4 cut(s)	20, 61, 126, 241
PctI	GAATGC	1 cut(s)	572
PfeI	GAWTC	7 cut(s)	177, 317, 411, 500, 545, 925, 1004
PflFI	GACNNNGTC	1 cut(s)	28
PinAI	ACCGGT	3 cut(s)	261, 452, 826
PkrI	GCNGC	8 cut(s)	18, 21, 147, 150, 153, 156, 770, 800
PleI	GAGTC	2 cut(s)	74, 217
PpsI	GAGTC	2 cut(s)	74, 217
Ppu21I	YACGTR	2 cut(s)	296, 971
Psp6I	CCWGG	2 cut(s)	75, 641
PspFI	CCCAGC	1 cut(s)	141
PspGI	CCWGG	2 cut(s)	75, 641
PspN4I	GGNNCC	4 cut(s)	242, 365, 717, 873
PspPI	GGNCC	4 cut(s)	241, 460, 592, 993
PspXI	VCTCGAGB	1 cut(s)	119
PstNI	CAGNNNCTG	1 cut(s)	148
PsuI	RGATCY	1 cut(s)	715
PsyI	GACNNNGTC	1 cut(s)	28
RsaI	GTAC	3 cut(s)	836, 885, 973
RsaNI	GTAC	3 cut(s)	835, 884, 972
RseI	CAYNNNNRTG	2 cut(s)	201, 842
SaqAI	TTAA	2 cut(s)	276, 398
SatI	GCNGC	8 cut(s)	17, 20, 146, 149, 152, 155, 769, 799
Sau3AI	GATC	3 cut(s)	126, 441, 715
Sau96I	GGNCC	4 cut(s)	241, 460, 592, 993
SchI	GAGTC	2 cut(s)	74, 217
SduI	GDGCHC	4 cut(s)	98, 366, 407, 874
SetI	ASST	9 cut(s)	274, 298, 435, 537, 687, 791, 952, 973, 995
SfaNI	GCATC	8 cut(s)	38, 126, 239, 260, 491, 642, 642, 902
SfcI	CTRYAG	1 cut(s)	43
Sfr274I	CTCGAG	2 cut(s)	119, 725
SfuI	TTCGAA	2 cut(s)	330, 576
SinI	GGWCC	2 cut(s)	241, 993
SlaI	CTCGAG	2 cut(s)	119, 725
SmaI	CCCGGG	2 cut(s)	596, 1015
SmiMI	CAYNNNNRTG	2 cut(s)	201, 842
SmlI	CTYRAG	2 cut(s)	119, 725
SmoI	CTYRAG	2 cut(s)	119, 725
SnaBI	TACGTA	1 cut(s)	971
Sse9I	AATT	3 cut(s)	709, 821, 976
SspMI	CTAG	1 cut(s)	1029
StyI	CCWWGG	1 cut(s)	738
TaaI	ACNGT	2 cut(s)	419, 707
TaiI	ACGT	3 cut(s)	298, 537, 973
TasI	AATT	3 cut(s)	709, 821, 976
TatI	WGTACW	1 cut(s)	834
TauI	GCSGC	6 cut(s)	19, 22, 148, 154, 771, 801
TfiI	GAWTC	7 cut(s)	177, 317, 411, 500, 545, 925, 1004
Tru1I	TTAA	2 cut(s)	276, 398
Tru9I	TTAA	2 cut(s)	276, 398
TscAI	CASTG	3 cut(s)	107, 307, 557
TseFI	GTSAC	1 cut(s)	267
TseI	GCWGC	2 cut(s)	148, 154
Tsp45I	GTSAC	1 cut(s)	267
TspDTI	ATGAA	2 cut(s)	219, 969
TspGWI	ACGGA	2 cut(s)	356, 854
TspMI	CCCGGG	2 cut(s)	594, 1013
TspRI	CASTG	3 cut(s)	107, 307, 557
Tth111I	GACNNNGTC	1 cut(s)	28
VpaK11BI	GGWCC	2 cut(s)	241, 993
XhoI	CTCGAG	2 cut(s)	119, 725
XmaI	CCCGGG	2 cut(s)	594, 1013
XspI	CTAG	1 cut(s)	1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.