Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001214

Physical Location & Seq

Genomic Coordinates Reverse (-)

73702759 .. 73705057

Gene Structure 2299 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG464500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGGCCATGTCATCGCCGTTGCCGACGACGTCGTATTGGTGCCACCGATGCACCCGCTTCGTCCGCATCTTCGTCCAAGACGCCTCCGTCACCTGCCCCTACTGCGACACCGGGTTCCTCGAAGAGATAGAGACGACTCCGCCGCCGGCGCCGACTCATCGCCACCGTCGCTTCCCGCCCTCTTATGCTCACGATCAAGAACCGGGTCAGAACCCGGCTCCGACCTCCCGCCGGGTTCGCCGGAGCTCCGGCGACAGGTCGCCTTTTAATCCGGTCATCGTCCTACGTGGCGCGGCCGATGACTCCGAGTCGAGCTCGTTCGAGCTCTACTACGACGACGCTGCCGGGTCGGGGCTCCGGCCGCTTCCCCCCACCATGTCCGAGTTTTTAATGGGGTCGGGCTTTGATCGGTTGCTGGAGCAGTTGTCCCAGATCGAAATCACCGGGCTTGGCCGACCCGAGAACCCGCCCGCTTCCAAATCCGCCGTGGAGTCTATGCCGGTGATTAAAATCAACGAATCCCACGTCGGGTCGGAGTCGCACTGCGCGGTTTGCAAAGAAGCTTTCGAATTCGGGTCGGAGGCCCGGGAAATGCCTTGCAACCACATATACCATTCGGATTGCATCCTCCCATGGCTCTCGATGCGAAACTCGTGCCCGGTCTGCCGGCACGAGCTGCCCGTTGACCGAAATTCGGATTCGGGTCACGATGAGGAGACCACCGGGTTGACTATCTGGAGATTACCCGGAGGCGGGTTCGCCGTGGGTCGGTTTTCGGGCGGGAGAAGACCCGGGGAGCGCGAATTGCCGGTTGTGTACACTGAAATGGACGGCGGGTTTAACGGAAACGGGGCTCCGAGAAGGGTATTATGGCAATCGAGGAATAGAGGAAGAGAGAGCCGCGGGATTGGCTGGGCTTTCCGTAATTTGGCCTCGTTCTTGGGGAGGTTTAGGTCAAATTCGTCTTCGAGGACCGGGTCGGAAACCGGGTCCGGGGCATTTAGTCGGAGTCGGAGCCAGTCAAGGTTCGGTCGGTACGCGCAGCGCCGGAGCCGGGCTTGGGTCTTGGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010035 GO:0010154 GO:0010200 GO:0010243 GO:0010498 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0022412 GO:0022414 GO:0030154 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051603 GO:0051865 GO:0060560 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0097305 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

358

Amino Acids

39.84

Weight (kDa)

8.35

Isoelectric Point (pI)

81.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	10 - 43	3e-13	zinc-ribbon
zf-RING_2	PF13639	181 - 223	1e-12	Ring finger domain
zf-C3HC4_2	PF13923	182 - 222	3.9e-08	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	182 - 223	1.2e-06	RING-H2 zinc finger domain
zf-C3HC4	PF00097	182 - 222	1.9e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	182 - 209	2.4e-06	RING-like zinc finger
DUF1117	PF06547	242 - 343	7.7e-36	Protein of unknown function (DUF1117)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39720 AT2G39720 AT3G46620 AT5G59550 AT5G59550
fragaria_vesca	FvH4_3g36860 FvH4_6g13340 FvH4_7g22850
malus_domestica	MD01G1136700.v1.1 MD03G1087100.v1.1 MD04G1131800.v1.1 MD07G1201700.v1.1 MD10G1074300.v1.1 MD11G1012900.v1.1 MD11G1096200.v1.1 MD12G1144900.v1.1
prunus_persica	Prupe.2G238300_v2.0.a1 Prupe.6G071800_v2.0.a1 Prupe.6G258400_v2.0.a1
pyrus_communis	pycom01g15740 pycom03g06910 pycom04g11990 pycom07g18870 pycom11g08150 pycom12g13930
rosa_chinensis	RchiOBHm_Chr1g0368011 RchiOBHm_Chr3g0466231 RchiOBHm_Chr5g0066071
rosa_laevigata	RLG00000024595 RLG00000027247 RLG00000035839
rosa_multiflora	Rmu_co8242689.1_g000001 Rmu_co8418295.1_g000001 Rmu_sc0000350.1_g000012 Rmu_sc0002406.1_g000005 Rmu_sc0005240.1_g000003 Rmu_sc0005240.1_g000004
rosa_roxburghii	Rroxscaffold_1G00014940 Rroxscaffold_4G00288940 Rroxscaffold_6G00414710
rosa_rugosa	Rorug01G0338400 Rorug03G0080500 Rorug05G0376200
rosa_samantha	Rh1AG345200 Rh1BG307500 Rh1CG323100 Rh1DG339600 Rh3BG147700 Rh3DG148400 Rh5AG434600 Rh5BG450900 Rh5CG473200 Rh5DG464500
rosa_wichuraiana	Rw1G030720 Rw3G011940 Rw5G040700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	101
AasI	GACNNNNNNGTC	1 cut(s)	86
AatII	GACGTC	1 cut(s)	32
Acc36I	ACCTGC	1 cut(s)	101
AccB1I	GGYRCC	2 cut(s)	39, 148
AccII	CGCG	5 cut(s)	293, 548, 801, 903, 1040
AcoI	YGGCCR	4 cut(s)	3, 294, 359, 451
AcsI	RAATTY	3 cut(s)	569, 691, 958
AcyI	GRCGYC	3 cut(s)	29, 81, 149
AfaI	GTAC	2 cut(s)	818, 1037
AhdI	GACNNNNNGTC	1 cut(s)	307
AjiI	CACGTC	1 cut(s)	526
AluBI	AGCT	5 cut(s)	246, 315, 325, 563, 676
AluI	AGCT	5 cut(s)	246, 315, 325, 563, 676
Alw21I	GWGCWC	3 cut(s)	248, 317, 327
Alw26I	GTCTC	2 cut(s)	125, 710
Ama87I	CYCGRG	3 cut(s)	458, 585, 791
AoxI	GGCC	6 cut(s)	3, 294, 359, 451, 582, 930
ApeKI	GCWGC	3 cut(s)	341, 676, 1042
ApoI	RAATTY	3 cut(s)	569, 691, 958
ArsI	GACNNNNNNTTYG	2 cut(s)	510, 542
AspLEI	GCGC	6 cut(s)	151, 293, 548, 801, 1042, 1047
AspS9I	GGNCC	3 cut(s)	583, 972, 990
AsuHPI	GGTGA	3 cut(s)	82, 433, 514
AsuII	TTCGAA	1 cut(s)	567
AvaI	CYCGRG	3 cut(s)	458, 585, 791
AvaII	GGWCC	2 cut(s)	972, 990
BaeGI	GKGCMC	1 cut(s)	659
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	39, 148
BanII	GRGCYC	5 cut(s)	248, 317, 327, 357, 856
BauI	CACGAG	2 cut(s)	652, 671
BbsI	GAAGAC	2 cut(s)	793, 957
Bbv12I	GWGCWC	3 cut(s)	248, 317, 327
BbvI	GCAGC	3 cut(s)	328, 663, 1054
BceAI	ACGGC	3 cut(s)	470, 746, 847
BcgI	CGANNNNNNTGC	6 cut(s)	40, 74, 323, 357, 636, 670
BcoDI	GTCTC	2 cut(s)	125, 710
BfoI	RGCGCY	2 cut(s)	152, 1048
BfuAI	ACCTGC	1 cut(s)	101
BisI	GCNGC	7 cut(s)	143, 294, 342, 362, 677, 901, 1043
BlsI	GCNGC	7 cut(s)	144, 295, 343, 363, 678, 902, 1044
Bme18I	GGWCC	2 cut(s)	972, 990
BmeRI	GACNNNNNGTC	1 cut(s)	307
BmeT110I	CYCGRG	3 cut(s)	458, 585, 791
BmgBI	CACGTC	1 cut(s)	526
BmgT120I	GGNCC	3 cut(s)	583, 972, 990
BmiI	GGNNCC	9 cut(s)	41, 116, 150, 219, 356, 855, 991, 1016, 1052
BmsI	GCATC	4 cut(s)	38, 75, 633, 633
BpiI	GAAGAC	2 cut(s)	793, 957
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	2 cut(s)	437, 757
Bpu14I	TTCGAA	1 cut(s)	567
BsaAI	YACGTR	1 cut(s)	287
BsaBI	GATNNNNATC	2 cut(s)	437, 509
BsaHI	GRCGYC	3 cut(s)	29, 81, 149
BsaI	GGTCTC	1 cut(s)	710
BsaJI	CCNNGG	8 cut(s)	486, 585, 632, 762, 791, 792, 901, 993
BsaWI	WCCGGW	1 cut(s)	271
BsaXI	ACNNNNNCTCC	2 cut(s)	410, 440
Bse118I	RCCGGY	4 cut(s)	145, 499, 666, 808
Bse1I	ACTGG	1 cut(s)	1018
Bse8I	GATNNNNATC	2 cut(s)	437, 509
BseDI	CCNNGG	8 cut(s)	486, 585, 632, 762, 791, 792, 901, 993
BseGI	GGATG	2 cut(s)	624, 1075
BseJI	GATNNNNATC	2 cut(s)	437, 509
BseNI	ACTGG	1 cut(s)	1018
BseRI	GAGGAG	1 cut(s)	728
BseSI	GKGCMC	1 cut(s)	659
BseX3I	CGGCCG	2 cut(s)	294, 359
BseXI	GCAGC	3 cut(s)	328, 663, 1054
BseYI	CCCAGC	1 cut(s)	912
Bsh1236I	CGCG	5 cut(s)	293, 548, 801, 903, 1040
Bsh1285I	CGRYCG	3 cut(s)	297, 362, 1033
BshFI	GGCC	6 cut(s)	5, 296, 361, 453, 584, 932
BshNI	GGYRCC	2 cut(s)	39, 148
BsiEI	CGRYCG	3 cut(s)	297, 362, 1033
BsiHKAI	GWGCWC	3 cut(s)	248, 317, 327
BsiHKCI	CYCGRG	3 cut(s)	458, 585, 791
BslFI	GGGAC	1 cut(s)	412
BsmAI	GTCTC	2 cut(s)	125, 710
BsmBI	CGTCTC	1 cut(s)	125
BsmFI	GGGAC	1 cut(s)	412
BsnI	GGCC	6 cut(s)	5, 296, 361, 453, 584, 932
Bso31I	GGTCTC	1 cut(s)	710
BsoBI	CYCGRG	3 cut(s)	458, 585, 791
Bsp119I	TTCGAA	1 cut(s)	567
Bsp1286I	GDGCHC	6 cut(s)	248, 317, 327, 357, 659, 856
Bsp1407I	TGTACA	1 cut(s)	816
Bsp143I	GATC	3 cut(s)	193, 406, 432
Bsp19I	CCATGG	1 cut(s)	632
BspANI	GGCC	6 cut(s)	5, 296, 361, 453, 584, 932
BspFNI	CGCG	5 cut(s)	293, 548, 801, 903, 1040
BspLI	GGNNCC	9 cut(s)	41, 116, 150, 219, 356, 855, 991, 1016, 1052
BspMI	ACCTGC	1 cut(s)	101
BspT104I	TTCGAA	1 cut(s)	567
BspT107I	GGYRCC	2 cut(s)	39, 148
BspTNI	GGTCTC	1 cut(s)	710
BsrFI	RCCGGY	4 cut(s)	145, 499, 666, 808
BsrGI	TGTACA	1 cut(s)	816
BsrI	ACTGG	1 cut(s)	1018
BssAI	RCCGGY	4 cut(s)	145, 499, 666, 808
BssECI	CCNNGG	8 cut(s)	486, 585, 632, 762, 791, 792, 901, 993
BssMI	GATC	3 cut(s)	193, 406, 432
BssNI	GRCGYC	3 cut(s)	29, 81, 149
BssSI	CACGAG	2 cut(s)	652, 671
BssT1I	CCWWGG	1 cut(s)	632
Bst2BI	CACGAG	2 cut(s)	652, 671
Bst4CI	ACNGT	1 cut(s)	167
Bst6I	CTCTTC	2 cut(s)	117, 886
BstACI	GRCGYC	3 cut(s)	29, 81, 149
BstAPI	GCANNNNNTGC	1 cut(s)	676
BstAUI	TGTACA	1 cut(s)	816
BstBAI	YACGTR	1 cut(s)	287
BstBI	TTCGAA	1 cut(s)	567
BstC8I	GCNNGC	3 cut(s)	147, 471, 668
BstDSI	CCRYGG	4 cut(s)	486, 632, 762, 901
BstF5I	GGATG	2 cut(s)	624, 1075
BstFNI	CGCG	5 cut(s)	293, 548, 801, 903, 1040
BstH2I	RGCGCY	2 cut(s)	152, 1048
BstHHI	GCGC	6 cut(s)	151, 293, 548, 801, 1042, 1047
BstKTI	GATC	3 cut(s)	196, 409, 435
BstMAI	GTCTC	2 cut(s)	125, 710
BstMBI	GATC	3 cut(s)	193, 406, 432
BstMCI	CGRYCG	3 cut(s)	297, 362, 1033
BstSLI	GKGCMC	1 cut(s)	659
BstUI	CGCG	5 cut(s)	293, 548, 801, 903, 1040
BstV1I	GCAGC	3 cut(s)	328, 663, 1054
BstV2I	GAAGAC	2 cut(s)	793, 957
BstZI	CGGCCG	2 cut(s)	294, 359
BsuRI	GGCC	6 cut(s)	5, 296, 361, 453, 584, 932
BtgI	CCRYGG	4 cut(s)	486, 632, 762, 901
BtgZI	GCGATG	1 cut(s)	143
BtrI	CACGTC	1 cut(s)	526
BtsCI	GGATG	2 cut(s)	624, 1075
BtsI	GCAGTG	1 cut(s)	541
BtsIMutI	CAGTG	2 cut(s)	541, 819
BveI	ACCTGC	1 cut(s)	101
Cac8I	GCNNGC	3 cut(s)	147, 471, 668
CfoI	GCGC	6 cut(s)	151, 293, 548, 801, 1042, 1047
Cfr10I	RCCGGY	4 cut(s)	145, 499, 666, 808
Cfr13I	GGNCC	3 cut(s)	583, 972, 990
Cfr42I	CCGCGG	1 cut(s)	904
Cfr9I	CCCGGG	2 cut(s)	585, 791
CseI	GACGC	2 cut(s)	89, 347
Csp6I	GTAC	2 cut(s)	817, 1036
CviAII	CATG	3 cut(s)	7, 376, 633
CviQI	GTAC	2 cut(s)	817, 1036
DinI	GGCGCC	1 cut(s)	150
DpnI	GATC	3 cut(s)	195, 408, 434
DpnII	GATC	3 cut(s)	193, 406, 432
DrdI	GACNNNNNNGTC	1 cut(s)	86
DriI	GACNNNNNGTC	1 cut(s)	307
DseDI	GACNNNNNNGTC	1 cut(s)	86
EaeI	YGGCCR	4 cut(s)	3, 294, 359, 451
EagI	CGGCCG	2 cut(s)	294, 359
Eam1104I	CTCTTC	2 cut(s)	117, 886
Eam1105I	GACNNNNNGTC	1 cut(s)	307
EarI	CTCTTC	2 cut(s)	117, 886
EciI	GGCGGA	2 cut(s)	129, 472
Ecl136II	GAGCTC	3 cut(s)	246, 315, 325
EclXI	CGGCCG	2 cut(s)	294, 359
Eco130I	CCWWGG	1 cut(s)	632
Eco24I	GRGCYC	5 cut(s)	248, 317, 327, 357, 856
Eco31I	GGTCTC	1 cut(s)	710
Eco47I	GGWCC	2 cut(s)	972, 990
Eco52I	CGGCCG	2 cut(s)	294, 359
Eco53kI	GAGCTC	3 cut(s)	246, 315, 325
Eco88I	CYCGRG	3 cut(s)	458, 585, 791
EcoICRI	GAGCTC	3 cut(s)	246, 315, 325
EcoRI	GAATTC	1 cut(s)	569
EcoT14I	CCWWGG	1 cut(s)	632
EcoT38I	GRGCYC	5 cut(s)	248, 317, 327, 357, 856
EgeI	GGCGCC	1 cut(s)	150
EheI	GGCGCC	1 cut(s)	150
ErhI	CCWWGG	1 cut(s)	632
Esp3I	CGTCTC	1 cut(s)	125
FaeI	CATG	3 cut(s)	10, 379, 636
FaiI	YATR	8 cut(s)	8, 186, 377, 497, 608, 610, 634, 871
FaqI	GGGAC	1 cut(s)	412
FatI	CATG	3 cut(s)	6, 375, 632
FauI	CCCGC	9 cut(s)	62, 183, 236, 474, 478, 746, 773, 827, 896
Fnu4HI	GCNGC	7 cut(s)	143, 294, 342, 362, 677, 901, 1043
FokI	GGATG	1 cut(s)	611
FriOI	GRGCYC	5 cut(s)	248, 317, 327, 357, 856
Fsp4HI	GCNGC	7 cut(s)	143, 294, 342, 362, 677, 901, 1043
GlaI	GCGC	6 cut(s)	150, 292, 547, 800, 1041, 1046
GluI	GCNGC	7 cut(s)	143, 294, 342, 362, 677, 901, 1043
GsaI	CCCAGC	1 cut(s)	916
GsuI	CTGGAG	2 cut(s)	437, 757
HaeII	RGCGCY	2 cut(s)	152, 1048
HaeIII	GGCC	6 cut(s)	5, 296, 361, 453, 584, 932
HgaI	GACGC	2 cut(s)	89, 347
HhaI	GCGC	6 cut(s)	151, 293, 548, 801, 1042, 1047
Hin1I	GRCGYC	3 cut(s)	29, 81, 149
Hin1II	CATG	3 cut(s)	10, 379, 636
Hin6I	GCGC	6 cut(s)	149, 291, 546, 799, 1040, 1045
HinP1I	GCGC	6 cut(s)	149, 291, 546, 799, 1040, 1045
HincII	GTYRAC	2 cut(s)	685, 729
HindII	GTYRAC	2 cut(s)	685, 729
HindIII	AAGCTT	1 cut(s)	561
HinfI	GANTC	9 cut(s)	136, 154, 302, 308, 491, 518, 536, 698, 1009
HphI	GGTGA	3 cut(s)	82, 433, 514
Hpy166II	GTNNAC	4 cut(s)	685, 729, 817, 819
Hpy188III	TCNNGA	5 cut(s)	191, 197, 640, 707, 736
Hpy8I	GTNNAC	4 cut(s)	685, 729, 817, 819
Hpy99I	CGWCG	7 cut(s)	28, 31, 34, 171, 338, 341, 530
HpyAV	CCTTC	1 cut(s)	855
HpyCH4III	ACNGT	1 cut(s)	167
HpyCH4IV	ACGT	3 cut(s)	29, 286, 525
HpyCH4V	TGCA	4 cut(s)	51, 555, 600, 624
HpySE526I	ACGT	3 cut(s)	29, 286, 525
Hsp92I	GRCGYC	3 cut(s)	29, 81, 149
Hsp92II	CATG	3 cut(s)	10, 379, 636
HspAI	GCGC	6 cut(s)	149, 291, 546, 799, 1040, 1045
KasI	GGCGCC	1 cut(s)	148
KroI	GCCGGC	2 cut(s)	145, 666
KroNI	GCCGGC	2 cut(s)	147, 668
KspI	CCGCGG	1 cut(s)	904
Kzo9I	GATC	3 cut(s)	193, 406, 432
LmnI	GCTCC	9 cut(s)	223, 243, 251, 360, 418, 796, 859, 1014, 1050
Lsp1109I	GCAGC	3 cut(s)	328, 663, 1054
LweI	GCATC	4 cut(s)	38, 75, 633, 633
MaeII	ACGT	3 cut(s)	29, 286, 525
MaeIII	GTNAC	2 cut(s)	88, 704
MalI	GATC	3 cut(s)	195, 408, 434
MboI	GATC	3 cut(s)	193, 406, 432
MboII	GAAGA	5 cut(s)	61, 134, 798, 903, 957
MhlI	GDGCHC	6 cut(s)	248, 317, 327, 357, 659, 856
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	5 cut(s)	569, 691, 803, 925, 958
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	149
MlyI	GAGTC	7 cut(s)	130, 148, 296, 317, 500, 545, 1018
MmeI	TCCRAC	6 cut(s)	245, 513, 558, 960, 986, 992
Mox20I	TGGCCA	1 cut(s)	5
MreI	CGCCGGCG	1 cut(s)	145
MroNI	GCCGGC	2 cut(s)	145, 666
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	4 cut(s)	267, 389, 507, 840
MslI	CAYNNNNRTG	1 cut(s)	824
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	903
MteI	GCGCNGCGC	1 cut(s)	1043
MvnI	CGCG	5 cut(s)	293, 548, 801, 903, 1040
NaeI	GCCGGC	2 cut(s)	147, 668
NarI	GGCGCC	1 cut(s)	149
NcoI	CCATGG	1 cut(s)	632
NdeII	GATC	3 cut(s)	193, 406, 432
NgoMIV	GCCGGC	2 cut(s)	145, 666
NlaIII	CATG	3 cut(s)	10, 379, 636
NlaIV	GGNNCC	9 cut(s)	41, 116, 150, 219, 356, 855, 991, 1016, 1052
NmuCI	GTSAC	2 cut(s)	88, 704
NspV	TTCGAA	1 cut(s)	567
PaqCI	CACCTGC	1 cut(s)	101
PcsI	WCGNNNNNNNCGW	3 cut(s)	20, 522, 678
PdiI	GCCGGC	2 cut(s)	147, 668
PfeI	GAWTC	2 cut(s)	518, 698
PflFI	GACNNNGTC	2 cut(s)	28, 976
PkrI	GCNGC	7 cut(s)	144, 295, 343, 363, 678, 902, 1044
PleI	GAGTC	7 cut(s)	130, 148, 296, 316, 499, 544, 1017
PluTI	GGCGCC	1 cut(s)	152
PpsI	GAGTC	7 cut(s)	130, 148, 296, 316, 499, 544, 1017
Ppu21I	YACGTR	1 cut(s)	287
Psp124BI	GAGCTC	3 cut(s)	248, 317, 327
PspFI	CCCAGC	1 cut(s)	912
PspN4I	GGNNCC	9 cut(s)	41, 116, 150, 219, 356, 855, 991, 1016, 1052
PspPI	GGNCC	3 cut(s)	583, 972, 990
PsyI	GACNNNGTC	2 cut(s)	28, 976
RsaI	GTAC	2 cut(s)	818, 1037
RsaNI	GTAC	2 cut(s)	817, 1036
RseI	CAYNNNNRTG	1 cut(s)	824
SacI	GAGCTC	3 cut(s)	248, 317, 327
SacII	CCGCGG	1 cut(s)	904
SaqAI	TTAA	4 cut(s)	267, 389, 507, 840
SatI	GCNGC	7 cut(s)	143, 294, 342, 362, 677, 901, 1043
Sau3AI	GATC	3 cut(s)	193, 406, 432
Sau96I	GGNCC	3 cut(s)	583, 972, 990
SchI	GAGTC	7 cut(s)	130, 148, 296, 317, 500, 545, 1018
SduI	GDGCHC	6 cut(s)	248, 317, 327, 357, 659, 856
SfaNI	GCATC	4 cut(s)	38, 75, 633, 633
SfoI	GGCGCC	1 cut(s)	150
Sfr303I	CCGCGG	1 cut(s)	904
SfuI	TTCGAA	1 cut(s)	567
SgrAI	CRCCGGYG	1 cut(s)	145
SgrBI	CCGCGG	1 cut(s)	904
SinI	GGWCC	2 cut(s)	972, 990
SmaI	CCCGGG	2 cut(s)	587, 793
SmiMI	CAYNNNNRTG	1 cut(s)	824
Sse9I	AATT	5 cut(s)	569, 691, 803, 925, 958
SspDI	GGCGCC	1 cut(s)	148
SstI	GAGCTC	3 cut(s)	248, 317, 327
StyI	CCWWGG	1 cut(s)	632
TaaI	ACNGT	1 cut(s)	167
TaiI	ACGT	3 cut(s)	32, 289, 528
TaqI	TCGA	8 cut(s)	120, 311, 321, 435, 567, 641, 878, 968
TaqII	GACCGA	2 cut(s)	702, 1019
TasI	AATT	5 cut(s)	569, 691, 803, 925, 958
TatI	WGTACW	1 cut(s)	816
TauI	GCSGC	4 cut(s)	145, 296, 364, 903
TfiI	GAWTC	2 cut(s)	518, 698
Tru1I	TTAA	4 cut(s)	267, 389, 507, 840
Tru9I	TTAA	4 cut(s)	267, 389, 507, 840
TscAI	CASTG	2 cut(s)	548, 826
TseFI	GTSAC	2 cut(s)	88, 704
TseI	GCWGC	3 cut(s)	341, 676, 1042
Tsp45I	GTSAC	2 cut(s)	88, 704
TspGWI	ACGGA	3 cut(s)	76, 858, 911
TspMI	CCCGGG	2 cut(s)	585, 791
TspRI	CASTG	2 cut(s)	548, 826
Tth111I	GACNNNGTC	2 cut(s)	28, 976
VpaK11BI	GGWCC	2 cut(s)	972, 990
XapI	RAATTY	3 cut(s)	569, 691, 958
XcmI	CCANNNNNNNNNTGG	1 cut(s)	484
XmaI	CCCGGG	2 cut(s)	585, 791
ZraI	GACGTC	1 cut(s)	30

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.