Rw3G011940

E3 ubiquitin-protein ligase RING1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0001214
Physical Location & Seq
Forward (+)
11788001 .. 11789776
1776 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G011940.1

Sequence Viewer

Length: 1119 bp
ATGGCCTCCATGGGCGCCTCCTACTGGTGCTACACGTGCAGCCGCATGATTCGGGTCCGGGTCCGGGCCCAAGACTCGATCTTTTGCCCCGACTGCGGCGCCGGGTTCATCGAGGAGATCCAGACCCCGACCCGATCCCCTCTCAACCACCCATTTCCGGCCGCCGCGATGTTCCTCGACAGCACGCCGATATCGCAGAGCCCGAGCCCCAGGCTGCGGCGGAGCCAGAGGAGCAGCCGCGACCGATCCCCTTTCAACCCGGTGATCGTGCTCCGCGGCCCGCCGGATTCCGGAGCCCCGGCTACGGAAACCGACCCGGGGACTTTTGAGCTGTACTACGACGACGGAGCGGGGTTGGGGCTTCGGCCGCTGCCGTCGAGCATGTCGGATTTCTTGATGGGGTCGGGTTTCGACCGGTTGCTCCACCAGTTGACCCAATTGGAGAACGGGGTCGGAAGATTGGACCACCCGCCGGCGTCGAAAGCCGCGATCGAGTCGATGCCGGTGATCAAAATCGAGGACAGCCACGTCACGACGGAGTCGCACTGCGCGGTGTGTAAGGAGGCGTTTGAGATTGATTCGGAGGCGCGTGAGATGCCCTGTAAGCACATTTACCATAATGATTGTATCTTTCCTTGGCTTTCGATTCGGAACTCGTGTCCGGTGTGTCGTCATCAGCTGCCGAGTGACGTACGCGGCGGCGGTGGGAGCGGCAGGCCCTCACTGGAGACTGCTCTGATCGGAGAGGAAGAGACTGTGGGATTGACTATATGGAGGTTACCGGGAGGCGGATTCGCTGTGGGGAGGTTCACCGGAGGAAGAAGAGCGGCGGAGCGTGAGCTTCCGGTGGTGTATACTGAGATGGACGGTGGGTTCAACACTGCTGGTGGTGCTCCGAGGATGATTTCGATGGCTTCGAGTGGAAGAAGAACAAGGGAGAGTGGTGGTTTTGCTAGAGCTTTTCGAAGTTTCTTCTCCTTTTTCGGGAGGCTTAGGAGCTCATCTTCAAGGTCGAGCTCGGAGTCTCGTTTAGCAAGAAGAAGTCGGAGCAGTAGTGTGTTCAGTAGATCTTCACGGCGGCGGAATCAGGGCTGGGCTTTTGAAGATGATGAGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

372

Amino Acids

40.88

Weight (kDa)

8.73

Isoelectric Point (pI)

84.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_19 PF14369 7 - 40 1e-13 zinc-ribbon
zf-rbx1 PF12678 179 - 224 3.2e-06 RING-H2 zinc finger domain
zf-RING_2 PF13639 182 - 224 6.1e-12 Ring finger domain
zf-C3HC4_2 PF13923 183 - 223 4.3e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 183 - 223 1.2e-06 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 183 - 210 4.1e-06 RING-like zinc finger
DUF1117 PF06547 253 - 359 9.6e-41 Protein of unknown function (DUF1117)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 527
AccB1I GGYRCC 2 cut(s) 14, 98
AccBSI CCGCTC 3 cut(s) 350, 711, 827
AccI GTMKAC 1 cut(s) 854
AccII CGCG 7 cut(s) 167, 240, 276, 488, 551, 589, 696
AccIII TCCGGA 1 cut(s) 290
AclWI GGATC 3 cut(s) 112, 129, 240
AcoI YGGCCR 2 cut(s) 159, 365
AcvI CACGTG 1 cut(s) 36
AcyI GRCGYC 3 cut(s) 15, 99, 476
AfaI GTAC 2 cut(s) 335, 693
AflIII ACRYGT 1 cut(s) 33
AgeI ACCGGT 1 cut(s) 414
AgsI TTSAA 4 cut(s) 256, 877, 1008, 1103
AjiI CACGTC 1 cut(s) 529
AjnI CCWGG 1 cut(s) 209
AloI GAACNNNNNNTCC 2 cut(s) 857, 889
AluBI AGCT 6 cut(s) 331, 679, 841, 959, 999, 1017
AluI AGCT 6 cut(s) 331, 679, 841, 959, 999, 1017
Alw21I GWGCWC 4 cut(s) 273, 895, 1001, 1019
Alw26I GTCTC 3 cut(s) 722, 746, 1029
AlwI GGATC 3 cut(s) 112, 129, 240
Ama87I CYCGRG 2 cut(s) 202, 316
Aor13HI TCCGGA 1 cut(s) 290
AoxI GGCC 6 cut(s) 3, 66, 159, 277, 365, 716
ApaI GGGCCC 1 cut(s) 70
ApeKI GCWGC 5 cut(s) 39, 214, 234, 370, 679
AsiGI ACCGGT 1 cut(s) 414
AspLEI GCGC 4 cut(s) 17, 101, 551, 589
AspS9I GGNCC 7 cut(s) 55, 61, 66, 67, 278, 463, 717
AsuC2I CCSGG 8 cut(s) 59, 65, 103, 260, 299, 317, 318, 783
AsuHPI GGTGA 3 cut(s) 274, 517, 802
AsuII TTCGAA 1 cut(s) 964
AvaI CYCGRG 2 cut(s) 202, 316
AvaII GGWCC 3 cut(s) 55, 61, 463
BaeGI GKGCMC 1 cut(s) 70
BanI GGYRCC 2 cut(s) 14, 98
BanII GRGCYC 6 cut(s) 70, 203, 209, 298, 1001, 1019
BauI CACGAG 1 cut(s) 655
BbrPI CACGTG 1 cut(s) 36
Bbv12I GWGCWC 4 cut(s) 273, 895, 1001, 1019
BbvI GCAGC 5 cut(s) 51, 201, 246, 357, 666
BccI CCATC 3 cut(s) 391, 856, 904
BceAI ACGGC 2 cut(s) 358, 1091
BciT130I CCWGG 1 cut(s) 211
BclI TGATCA 1 cut(s) 507
BcnI CCSGG 8 cut(s) 59, 65, 103, 260, 299, 317, 318, 783
BcoDI GTCTC 3 cut(s) 722, 746, 1029
BfaI CTAG 1 cut(s) 954
BfoI RGCGCY 2 cut(s) 18, 102
BglII AGATCT 1 cut(s) 1067
Bme1390I CCNGG 9 cut(s) 59, 65, 103, 211, 260, 299, 317, 318, 783
Bme18I GGWCC 3 cut(s) 55, 61, 463
BmeT110I CYCGRG 2 cut(s) 202, 316
BmgBI CACGTC 1 cut(s) 529
BmgT120I GGNCC 7 cut(s) 55, 61, 66, 67, 278, 463, 717
BmiI GGNNCC 7 cut(s) 16, 56, 62, 68, 100, 224, 295
BmrFI CCNGG 9 cut(s) 59, 65, 103, 211, 260, 299, 317, 318, 783
BmsI GCATC 2 cut(s) 489, 585
BpmI CTGGAG 1 cut(s) 746
Bpu10I CCTNAGC 1 cut(s) 992
Bpu14I TTCGAA 1 cut(s) 964
BpuMI CCSGG 8 cut(s) 59, 65, 103, 260, 299, 317, 318, 783
BsaAI YACGTR 1 cut(s) 36
BsaBI GATNNNNATC 1 cut(s) 512
BsaHI GRCGYC 3 cut(s) 15, 99, 476
BsaJI CCNNGG 8 cut(s) 9, 209, 274, 297, 316, 317, 635, 896
BsaWI WCCGGW 5 cut(s) 290, 414, 661, 812, 844
BsaXI ACNNNNNCTCC 2 cut(s) 1039, 1069
Bse118I RCCGGY 3 cut(s) 414, 472, 502
Bse1I ACTGG 3 cut(s) 29, 427, 729
Bse8I GATNNNNATC 1 cut(s) 512
BseAI TCCGGA 1 cut(s) 290
BseBI CCWGG 1 cut(s) 211
BseDI CCNNGG 8 cut(s) 9, 209, 274, 297, 316, 317, 635, 896
BseGI GGATG 1 cut(s) 906
BseJI GATNNNNATC 1 cut(s) 512
BseMII CTCAG 1 cut(s) 849
BseNI ACTGG 3 cut(s) 29, 427, 729
BseRI GAGGAG 2 cut(s) 128, 244
BseSI GKGCMC 1 cut(s) 70
BseX3I CGGCCG 2 cut(s) 159, 365
BseXI GCAGC 5 cut(s) 51, 201, 246, 357, 666
BseYI CCCAGC 1 cut(s) 1092
BsgI GTGCAG 1 cut(s) 58
Bsh1236I CGCG 7 cut(s) 167, 240, 276, 488, 551, 589, 696
Bsh1285I CGRYCG 5 cut(s) 162, 244, 368, 415, 492
BshFI GGCC 6 cut(s) 5, 68, 161, 279, 367, 718
BshNI GGYRCC 2 cut(s) 14, 98
BshTI ACCGGT 1 cut(s) 414
BsiEI CGRYCG 5 cut(s) 162, 244, 368, 415, 492
BsiHKAI GWGCWC 4 cut(s) 273, 895, 1001, 1019
BsiHKCI CYCGRG 2 cut(s) 202, 316
BsiWI CGTACG 1 cut(s) 691
BslFI GGGAC 1 cut(s) 334
BsmAI GTCTC 3 cut(s) 722, 746, 1029
BsmFI GGGAC 1 cut(s) 334
BsnI GGCC 6 cut(s) 5, 68, 161, 279, 367, 718
BsoBI CYCGRG 2 cut(s) 202, 316
Bsp119I TTCGAA 1 cut(s) 964
Bsp120I GGGCCC 1 cut(s) 66
Bsp1286I GDGCHC 8 cut(s) 70, 203, 209, 273, 298, 895, 1001, 1019
Bsp13I TCCGGA 1 cut(s) 290
Bsp143I GATC 9 cut(s) 78, 117, 134, 245, 264, 489, 507, 738, 1067
Bsp19I CCATGG 1 cut(s) 9
BspANI GGCC 6 cut(s) 5, 68, 161, 279, 367, 718
BspCNI CTCAG 1 cut(s) 850
BspEI TCCGGA 1 cut(s) 290
BspFNI CGCG 7 cut(s) 167, 240, 276, 488, 551, 589, 696
BspLI GGNNCC 7 cut(s) 16, 56, 62, 68, 100, 224, 295
BspPI GGATC 3 cut(s) 112, 129, 240
BspQI GCTCTTC 1 cut(s) 817
BspT104I TTCGAA 1 cut(s) 964
BspT107I GGYRCC 2 cut(s) 14, 98
BsrBI CCGCTC 3 cut(s) 350, 711, 827
BsrFI RCCGGY 3 cut(s) 414, 472, 502
BsrI ACTGG 3 cut(s) 29, 427, 729
BssAI RCCGGY 3 cut(s) 414, 472, 502
BssECI CCNNGG 8 cut(s) 9, 209, 274, 297, 316, 317, 635, 896
BssMI GATC 9 cut(s) 78, 117, 134, 245, 264, 489, 507, 738, 1067
BssNAI GTATAC 1 cut(s) 855
BssNI GRCGYC 3 cut(s) 15, 99, 476
BssSI CACGAG 1 cut(s) 655
BssT1I CCWWGG 2 cut(s) 9, 635
Bst1107I GTATAC 1 cut(s) 855
Bst2BI CACGAG 1 cut(s) 655
Bst2UI CCWGG 1 cut(s) 211
Bst4CI ACNGT 2 cut(s) 757, 869
Bst6I CTCTTC 2 cut(s) 744, 817
BstACI GRCGYC 3 cut(s) 15, 99, 476
BstBAI YACGTR 1 cut(s) 36
BstBI TTCGAA 1 cut(s) 964
BstC8I GCNNGC 4 cut(s) 185, 281, 474, 716
BstDEI CTNAG 2 cut(s) 858, 992
BstDSI CCRYGG 2 cut(s) 9, 274
BstEII GGTNACC 1 cut(s) 777
BstF5I GGATG 1 cut(s) 906
BstFNI CGCG 7 cut(s) 167, 240, 276, 488, 551, 589, 696
BstH2I RGCGCY 2 cut(s) 18, 102
BstHHI GCGC 4 cut(s) 17, 101, 551, 589
BstKTI GATC 9 cut(s) 81, 120, 137, 248, 267, 492, 510, 741, 1070
BstMAI GTCTC 3 cut(s) 722, 746, 1029
BstMBI GATC 9 cut(s) 78, 117, 134, 245, 264, 489, 507, 738, 1067
BstMCI CGRYCG 5 cut(s) 162, 244, 368, 415, 492
BstNI CCWGG 1 cut(s) 211
BstNSI RCATGY 1 cut(s) 385
BstPI GGTNACC 1 cut(s) 777
BstSCI CCNGG 9 cut(s) 57, 63, 101, 209, 258, 297, 315, 316, 781
BstSLI GKGCMC 1 cut(s) 70
BstUI CGCG 7 cut(s) 167, 240, 276, 488, 551, 589, 696
BstV1I GCAGC 5 cut(s) 51, 201, 246, 357, 666
BstX2I RGATCY 2 cut(s) 117, 1067
BstYI RGATCY 2 cut(s) 117, 1067
BstZ17I GTATAC 1 cut(s) 855
BstZI CGGCCG 2 cut(s) 159, 365
BsuRI GGCC 6 cut(s) 5, 68, 161, 279, 367, 718
BtgI CCRYGG 2 cut(s) 9, 274
BtgZI GCGATG 1 cut(s) 182
BtrI CACGTC 1 cut(s) 529
BtsCI GGATG 1 cut(s) 906
BtsI GCAGTG 2 cut(s) 544, 879
BtsIMutI CAGTG 3 cut(s) 544, 722, 879
Cac8I GCNNGC 4 cut(s) 185, 281, 474, 716
CfoI GCGC 4 cut(s) 17, 101, 551, 589
Cfr10I RCCGGY 3 cut(s) 414, 472, 502
Cfr13I GGNCC 7 cut(s) 55, 61, 66, 67, 278, 463, 717
Cfr42I CCGCGG 1 cut(s) 277
Cfr9I CCCGGG 1 cut(s) 316
CseI GACGC 1 cut(s) 465
Csp6I GTAC 2 cut(s) 334, 692
CspAI ACCGGT 1 cut(s) 414
CviAII CATG 3 cut(s) 10, 46, 382
CviQI GTAC 2 cut(s) 334, 692
DdeI CTNAG 2 cut(s) 858, 992
DinI GGCGCC 2 cut(s) 16, 100
DpnI GATC 9 cut(s) 80, 119, 136, 247, 266, 491, 509, 740, 1069
DpnII GATC 9 cut(s) 78, 117, 134, 245, 264, 489, 507, 738, 1067
DrdI GACNNNNNNGTC 1 cut(s) 527
DseDI GACNNNNNNGTC 1 cut(s) 527
EaeI YGGCCR 2 cut(s) 159, 365
EagI CGGCCG 2 cut(s) 159, 365
Eam1104I CTCTTC 2 cut(s) 744, 817
EarI CTCTTC 2 cut(s) 744, 817
EciI GGCGGA 4 cut(s) 235, 804, 845, 1096
Ecl136II GAGCTC 2 cut(s) 999, 1017
EclXI CGGCCG 2 cut(s) 159, 365
Eco130I CCWWGG 2 cut(s) 9, 635
Eco24I GRGCYC 6 cut(s) 70, 203, 209, 298, 1001, 1019
Eco32I GATATC 1 cut(s) 192
Eco47I GGWCC 3 cut(s) 55, 61, 463
Eco52I CGGCCG 2 cut(s) 159, 365
Eco53kI GAGCTC 2 cut(s) 999, 1017
Eco72I CACGTG 1 cut(s) 36
Eco88I CYCGRG 2 cut(s) 202, 316
Eco91I GGTNACC 1 cut(s) 777
EcoICRI GAGCTC 2 cut(s) 999, 1017
EcoO109I RGGNCCY 1 cut(s) 717
EcoO65I GGTNACC 1 cut(s) 777
EcoRII CCWGG 1 cut(s) 209
EcoRV GATATC 1 cut(s) 192
EcoT14I CCWWGG 2 cut(s) 9, 635
EcoT38I GRGCYC 6 cut(s) 70, 203, 209, 298, 1001, 1019
EgeI GGCGCC 2 cut(s) 16, 100
EheI GGCGCC 2 cut(s) 16, 100
ErhI CCWWGG 2 cut(s) 9, 635
FaeI CATG 3 cut(s) 13, 49, 385
FaiI YATR 7 cut(s) 11, 47, 383, 618, 770, 772, 855
FaqI GGGAC 1 cut(s) 334
FatI CATG 3 cut(s) 9, 45, 381
FauI CCCGC 3 cut(s) 288, 343, 477
FbaI TGATCA 1 cut(s) 507
FblI GTMKAC 1 cut(s) 854
FokI GGATG 1 cut(s) 913
FriOI GRGCYC 6 cut(s) 70, 203, 209, 298, 1001, 1019
FspBI CTAG 1 cut(s) 954
GlaI GCGC 4 cut(s) 16, 100, 550, 588
GsaI CCCAGC 1 cut(s) 1096
GsuI CTGGAG 1 cut(s) 746
HaeII RGCGCY 2 cut(s) 18, 102
HaeIII GGCC 6 cut(s) 5, 68, 161, 279, 367, 718
HgaI GACGC 1 cut(s) 465
HhaI GCGC 4 cut(s) 17, 101, 551, 589
Hin1I GRCGYC 3 cut(s) 15, 99, 476
Hin1II CATG 3 cut(s) 13, 49, 385
Hin6I GCGC 4 cut(s) 15, 99, 549, 587
HinP1I GCGC 4 cut(s) 15, 99, 549, 587
HincII GTYRAC 1 cut(s) 432
HindII GTYRAC 1 cut(s) 432
HphI GGTGA 3 cut(s) 274, 517, 802
Hpy166II GTNNAC 3 cut(s) 432, 810, 855
Hpy188I TCNGA 9 cut(s) 388, 455, 583, 651, 738, 743, 897, 1021, 1047
Hpy188III TCNNGA 5 cut(s) 121, 291, 394, 532, 985
Hpy8I GTNNAC 3 cut(s) 432, 810, 855
Hpy99I CGWCG 5 cut(s) 344, 347, 379, 481, 538
HpyCH4III ACNGT 2 cut(s) 757, 869
HpyCH4IV ACGT 3 cut(s) 35, 528, 690
HpyCH4V TGCA 1 cut(s) 39
HpyF3I CTNAG 2 cut(s) 858, 992
HpySE526I ACGT 3 cut(s) 35, 528, 690
Hsp92I GRCGYC 3 cut(s) 15, 99, 476
Hsp92II CATG 3 cut(s) 13, 49, 385
HspAI GCGC 4 cut(s) 15, 99, 549, 587
KasI GGCGCC 2 cut(s) 14, 98
Kpn2I TCCGGA 1 cut(s) 290
KroI GCCGGC 1 cut(s) 472
KroNI GCCGGC 1 cut(s) 474
Ksp22I TGATCA 1 cut(s) 507
KspI CCGCGG 1 cut(s) 277
Kzo9I GATC 9 cut(s) 78, 117, 134, 245, 264, 489, 507, 738, 1067
LguI GCTCTTC 1 cut(s) 817
Lsp1109I GCAGC 5 cut(s) 51, 201, 246, 357, 666
LweI GCATC 2 cut(s) 489, 585
MaeI CTAG 1 cut(s) 954
MaeII ACGT 3 cut(s) 35, 528, 690
MaeIII GTNAC 3 cut(s) 529, 686, 777
MalI GATC 9 cut(s) 80, 119, 136, 247, 266, 491, 509, 740, 1069
MbiI CCGCTC 3 cut(s) 350, 711, 827
MboI GATC 9 cut(s) 78, 117, 134, 245, 264, 489, 507, 738, 1067
MfeI CAATTG 1 cut(s) 437
MflI RGATCY 2 cut(s) 117, 1067
MhlI GDGCHC 8 cut(s) 70, 203, 209, 273, 298, 895, 1001, 1019
MluCI AATT 1 cut(s) 437
Mly113I GGCGCC 2 cut(s) 15, 99
MlyI GAGTC 4 cut(s) 68, 503, 548, 1031
MmeI TCCRAC 3 cut(s) 366, 433, 1025
MreI CGCCGGCG 1 cut(s) 472
MroI TCCGGA 1 cut(s) 290
MroNI GCCGGC 1 cut(s) 472
MspA1I CMGCKG 3 cut(s) 276, 370, 679
MspR9I CCNGG 9 cut(s) 59, 65, 103, 211, 260, 299, 317, 318, 783
MunI CAATTG 1 cut(s) 437
MvaI CCWGG 1 cut(s) 211
MvnI CGCG 7 cut(s) 167, 240, 276, 488, 551, 589, 696
NaeI GCCGGC 1 cut(s) 474
NarI GGCGCC 2 cut(s) 15, 99
NciI CCSGG 8 cut(s) 59, 65, 103, 260, 299, 317, 318, 783
NcoI CCATGG 1 cut(s) 9
NdeII GATC 9 cut(s) 78, 117, 134, 245, 264, 489, 507, 738, 1067
NgoMIV GCCGGC 1 cut(s) 472
NlaIII CATG 3 cut(s) 13, 49, 385
NlaIV GGNNCC 7 cut(s) 16, 56, 62, 68, 100, 224, 295
NmeAIII GCCGAG 1 cut(s) 708
NmuCI GTSAC 2 cut(s) 529, 686
NspI RCATGY 1 cut(s) 385
NspV TTCGAA 1 cut(s) 964
PciSI GCTCTTC 1 cut(s) 817
PcsI WCGNNNNNNNCGW 3 cut(s) 200, 485, 914
PdiI GCCGGC 1 cut(s) 474
PfeI GAWTC 6 cut(s) 49, 287, 578, 646, 792, 1084
Pfl23II CGTACG 1 cut(s) 691
PflFI GACNNNGTC 1 cut(s) 538
PinAI ACCGGT 1 cut(s) 414
Ple19I CGATCG 1 cut(s) 492
PleI GAGTC 4 cut(s) 68, 502, 547, 1030
PluTI GGCGCC 2 cut(s) 18, 102
PmaCI CACGTG 1 cut(s) 36
PmlI CACGTG 1 cut(s) 36
PpsI GAGTC 4 cut(s) 68, 502, 547, 1030
Ppu21I YACGTR 1 cut(s) 36
Psp124BI GAGCTC 2 cut(s) 1001, 1019
Psp6I CCWGG 1 cut(s) 209
PspCI CACGTG 1 cut(s) 36
PspEI GGTNACC 1 cut(s) 777
PspFI CCCAGC 1 cut(s) 1092
PspGI CCWGG 1 cut(s) 209
PspLI CGTACG 1 cut(s) 691
PspN4I GGNNCC 7 cut(s) 16, 56, 62, 68, 100, 224, 295
PspOMI GGGCCC 1 cut(s) 66
PspPI GGNCC 7 cut(s) 55, 61, 66, 67, 278, 463, 717
PsuI RGATCY 2 cut(s) 117, 1067
PsyI GACNNNGTC 1 cut(s) 538
PvuI CGATCG 1 cut(s) 492
PvuII CAGCTG 1 cut(s) 679
RsaI GTAC 2 cut(s) 335, 693
RsaNI GTAC 2 cut(s) 334, 692
SacI GAGCTC 2 cut(s) 1001, 1019
SacII CCGCGG 1 cut(s) 277
SapI GCTCTTC 1 cut(s) 817
Sau3AI GATC 9 cut(s) 78, 117, 134, 245, 264, 489, 507, 738, 1067
Sau96I GGNCC 7 cut(s) 55, 61, 66, 67, 278, 463, 717
SchI GAGTC 4 cut(s) 68, 503, 548, 1031
ScrFI CCNGG 9 cut(s) 59, 65, 103, 211, 260, 299, 317, 318, 783
SduI GDGCHC 8 cut(s) 70, 203, 209, 273, 298, 895, 1001, 1019
SfaNI GCATC 2 cut(s) 489, 585
SfoI GGCGCC 2 cut(s) 16, 100
Sfr303I CCGCGG 1 cut(s) 277
SfuI TTCGAA 1 cut(s) 964
SgrAI CRCCGGYG 1 cut(s) 472
SgrBI CCGCGG 1 cut(s) 277
SinI GGWCC 3 cut(s) 55, 61, 463
SmaI CCCGGG 1 cut(s) 318
Sse9I AATT 1 cut(s) 437
SspDI GGCGCC 2 cut(s) 14, 98
SspMI CTAG 1 cut(s) 954
SstI GAGCTC 2 cut(s) 1001, 1019
StyD4I CCNGG 9 cut(s) 57, 63, 101, 209, 258, 297, 315, 316, 781
StyI CCWWGG 2 cut(s) 9, 635
TaaI ACNGT 2 cut(s) 757, 869
TaiI ACGT 3 cut(s) 38, 531, 693
TaqII GACCGA 1 cut(s) 258
TasI AATT 1 cut(s) 437
TatI WGTACW 1 cut(s) 333
TfiI GAWTC 6 cut(s) 49, 287, 578, 646, 792, 1084
TscAI CASTG 3 cut(s) 551, 729, 886
TseFI GTSAC 2 cut(s) 529, 686
TseI GCWGC 5 cut(s) 39, 214, 234, 370, 679
Tsp45I GTSAC 2 cut(s) 529, 686
TspDTI ATGAA 1 cut(s) 97
TspGWI ACGGA 3 cut(s) 320, 360, 551
TspMI CCCGGG 1 cut(s) 316
TspRI CASTG 3 cut(s) 551, 729, 886
Tth111I GACNNNGTC 1 cut(s) 538
VpaK11BI GGWCC 3 cut(s) 55, 61, 463
XceI RCATGY 1 cut(s) 385
XmaI CCCGGG 1 cut(s) 316
XmiI GTMKAC 1 cut(s) 854
XspI CTAG 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.