Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001214

Physical Location & Seq

Genomic Coordinates Reverse (-)

17954373 .. 17955530

Gene Structure 1158 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g22850.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

ATGTCCGCAACGACGTCATGTTGCTGGTGCTACAGATGTAGCAGGTTCGTTAGGGTTCTGAGCGCCGCCGCCGACTTACCGGTGGTGTGTCCTGACTGCGGCAGCGGCTTCGTCGAGGAGATCGGCAACCCGGCCCGCTCCGCCGTCCACGTCGATTCGCACCCTAGAGCCACTCCGGCTCCGGCTTCGATGTACATGACCGGCGCCAACCACCTCTCCGGCTCCAATCCTCGCAGAAACAACGGCGGTGACCGATCGGCGGCGCCTAATCCGGTGATTGTGATGCGCGGCGGAGCTGAGGCGGCGGCGAACGAGGAGGGGAGAGGATTCGGGCTCTTCTACGACGACGGATCCGGGTCGGGTCTGCGGCCGTTACCGAACAACATGTCGGAGTTTCTCCTCGGGGCCGGGTTCGACCGCCTCTTGAATCAGCTCTCGCAGATGGATTTGAACGGAATCGGGAGGTTTGACCAGCGACCGGCGGCGAAGTCGGCGGTGGAGTCGCTGCCGACGATCGAGCTCAAGGACTCGCACGTCGCCGACGAGTCTCACTGCGCTGTGTGCAAAGAGGCCTTCGAATTGGGAAACGAAGCTCGGGAGATGCCTTGCAAGCACATATACCACTCCGATTGCATCCTGCCGTGGCTTGCGCAGCGGAACTCGTGTCCGGTGTGCCGGTTCGAGCTTCCGACGGACTCTCCGGCGGCGGCGAACCCGGCTGTGGCGGCGAGCGAGGAAGAGAACGCCGCGCTGACGATATGGAGGCTGCCGGGAGGCGGATTCGCGGTGGGGAGAGTCGCCGGCGGGAGAAGAGCTGGCGGCGATAGGGAGCTGCCGGTTGTGTACACGGAAGTGGACGGCGGGTTTAACGGCGGTGCACCGAGGAGGGTTATGTGGTCGAGGAACGGTGGGAGAAGAAGACAGAGAGGTGGAGTTGGCCGGTTTGTGAGAAGCATATTCACTTGTTTTAACGGTGGCAGGGCAGTTGTGCCTAGGTCGTCTTCTGCTCCGGTGGCGCCGAGTTCAGTGCCGGAAACGAGGCCTGCGCCGGTGAACGATAGGAGGGCGAGGTCGTCGAATTCAGAGAGGCCAAGTTCCACGCCGCAGACGCCCAGAACTTGGTCTATGGAGGTTAACAATGGGGTTGTCACATGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010154 GO:0010498 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0022412 GO:0022414 GO:0030154 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0036211 GO:0040007 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0051603 GO:0060560 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

386

Amino Acids

41.14

Weight (kDa)

8.6

Isoelectric Point (pI)

63.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	9 - 41	2.8e-11	zinc-ribbon
zf-RING_2	PF13639	184 - 226	9.8e-13	Ring finger domain
zf-C3HC4_2	PF13923	185 - 225	1.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	185 - 212	4.5e-07	RING-like zinc finger
zf-C3HC4	PF00097	185 - 225	1.2e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	185 - 223	9e-06	RING-type zinc-finger
zf-rbx1	PF12678	201 - 226	1.4e-06	RING-H2 zinc finger domain
DUF1117	PF06547	251 - 342	4.6e-31	Protein of unknown function (DUF1117)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39720 AT2G39720 AT3G46620 AT5G59550 AT5G59550
fragaria_vesca	FvH4_3g36860 FvH4_6g13340 FvH4_7g22850
malus_domestica	MD01G1136700.v1.1 MD03G1087100.v1.1 MD04G1131800.v1.1 MD07G1201700.v1.1 MD10G1074300.v1.1 MD11G1012900.v1.1 MD11G1096200.v1.1 MD12G1144900.v1.1
prunus_persica	Prupe.2G238300_v2.0.a1 Prupe.6G071800_v2.0.a1 Prupe.6G258400_v2.0.a1
pyrus_communis	pycom01g15740 pycom03g06910 pycom04g11990 pycom07g18870 pycom11g08150 pycom12g13930
rosa_chinensis	RchiOBHm_Chr1g0368011 RchiOBHm_Chr3g0466231 RchiOBHm_Chr5g0066071
rosa_laevigata	RLG00000024595 RLG00000027247 RLG00000035839
rosa_multiflora	Rmu_co8242689.1_g000001 Rmu_co8418295.1_g000001 Rmu_sc0000350.1_g000012 Rmu_sc0002406.1_g000005 Rmu_sc0005240.1_g000003 Rmu_sc0005240.1_g000004
rosa_roxburghii	Rroxscaffold_1G00014940 Rroxscaffold_4G00288940 Rroxscaffold_6G00414710
rosa_rugosa	Rorug01G0338400 Rorug03G0080500 Rorug05G0376200
rosa_samantha	Rh1AG345200 Rh1BG307500 Rh1CG323100 Rh1DG339600 Rh3BG147700 Rh3DG148400 Rh5AG434600 Rh5BG450900 Rh5CG473200 Rh5DG464500
rosa_wichuraiana	Rw1G030720 Rw3G011940 Rw5G040700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	533
AatII	GACGTC	1 cut(s)	17
Acc16I	TGCGCA	1 cut(s)	651
Acc36I	ACCTGC	1 cut(s)	33
AccB1I	GGYRCC	3 cut(s)	203, 262, 1015
AccB7I	CCANNNNNTGG	1 cut(s)	1119
AccBSI	CCGCTC	1 cut(s)	138
AccII	CGCG	3 cut(s)	288, 749, 785
AclWI	GGATC	2 cut(s)	345, 358
AcoI	YGGCCR	2 cut(s)	368, 937
AcsI	RAATTY	1 cut(s)	1078
AcyI	GRCGYC	5 cut(s)	14, 204, 263, 1016, 1109
AfaI	GTAC	2 cut(s)	194, 845
AfiI	CCNNNNNNNGG	6 cut(s)	98, 259, 478, 721, 776, 1119
AflIII	ACRYGT	1 cut(s)	384
AgeI	ACCGGT	1 cut(s)	79
AgsI	TTSAA	2 cut(s)	427, 451
AjiI	CACGTC	2 cut(s)	151, 535
AleI	CACNNNNGTG	1 cut(s)	851
AluBI	AGCT	7 cut(s)	296, 433, 520, 593, 685, 815, 832
AluI	AGCT	7 cut(s)	296, 433, 520, 593, 685, 815, 832
Alw21I	GWGCWC	2 cut(s)	522, 880
Alw26I	GTCTC	1 cut(s)	552
Alw44I	GTGCAC	1 cut(s)	876
AlwI	GGATC	2 cut(s)	345, 358
Ama87I	CYCGRG	2 cut(s)	401, 594
AoxI	GGCC	7 cut(s)	132, 368, 405, 570, 937, 1040, 1088
ApaLI	GTGCAC	1 cut(s)	876
ApeKI	GCWGC	5 cut(s)	102, 505, 652, 766, 832
ApoI	RAATTY	1 cut(s)	1078
ArsI	GACNNNNNNTTYG	2 cut(s)	371, 403
AsiGI	ACCGGT	1 cut(s)	79
AspA2I	CCTAGG	1 cut(s)	992
AspLEI	GCGC	9 cut(s)	65, 206, 265, 288, 557, 652, 751, 1018, 1048
AspS9I	GGNCC	2 cut(s)	133, 405
AsuC2I	CCSGG	5 cut(s)	131, 355, 409, 716, 771
AsuHPI	GGTGA	3 cut(s)	260, 286, 1063
AsuII	TTCGAA	1 cut(s)	576
AvaI	CYCGRG	2 cut(s)	401, 594
AvrII	CCTAGG	1 cut(s)	992
BaeGI	GKGCMC	1 cut(s)	880
BamHI	GGATCC	1 cut(s)	350
BanI	GGYRCC	3 cut(s)	203, 262, 1015
BanII	GRGCYC	2 cut(s)	336, 522
BauI	CACGAG	1 cut(s)	661
BbsI	GAAGAC	2 cut(s)	925, 993
Bbv12I	GWGCWC	2 cut(s)	522, 880
BbvCI	CCTCAGC	1 cut(s)	297
BbvI	GCAGC	5 cut(s)	114, 492, 664, 753, 819
BccI	CCATC	1 cut(s)	436
BceAI	ACGGC	6 cut(s)	128, 259, 355, 625, 874, 886
BcgI	CGANNNNNNTGC	4 cut(s)	91, 125, 1009, 1043
BcnI	CCSGG	5 cut(s)	131, 355, 409, 716, 771
BcoDI	GTCTC	1 cut(s)	552
BfaI	CTAG	2 cut(s)	165, 993
BfmI	CTRYAG	1 cut(s)	31
BfoI	RGCGCY	4 cut(s)	66, 207, 266, 1019
BfuAI	ACCTGC	1 cut(s)	33
BglI	GCCNNNNNGGC	1 cut(s)	176
BlnI	CCTAGG	1 cut(s)	992
Bme1390I	CCNGG	5 cut(s)	131, 355, 409, 716, 771
BmeT110I	CYCGRG	2 cut(s)	401, 594
BmgBI	CACGTC	2 cut(s)	151, 535
BmgT120I	GGNCC	2 cut(s)	133, 405
BmiI	GGNNCC	7 cut(s)	180, 205, 223, 264, 352, 406, 1017
BmrFI	CCNGG	5 cut(s)	131, 355, 409, 716, 771
BmsI	GCATC	3 cut(s)	273, 591, 642
BpiI	GAAGAC	2 cut(s)	925, 993
Bpu10I	CCTNAGC	1 cut(s)	297
Bpu14I	TTCGAA	1 cut(s)	576
BpuEI	CTTGAG	1 cut(s)	506
BpuMI	CCSGG	5 cut(s)	131, 355, 409, 716, 771
BsaHI	GRCGYC	5 cut(s)	14, 204, 263, 1016, 1109
BsaJI	CCNNGG	4 cut(s)	400, 641, 881, 992
BsaWI	WCCGGW	4 cut(s)	79, 271, 667, 1009
BsaXI	ACNNNNNCTCC	6 cut(s)	163, 193, 200, 230, 682, 712
Bsc4I	CCNNNNNNNGG	6 cut(s)	98, 259, 478, 721, 776, 1119
Bse118I	RCCGGY	8 cut(s)	79, 200, 478, 675, 800, 835, 939, 1048
BseDI	CCNNGG	4 cut(s)	400, 641, 881, 992
BseGI	GGATG	1 cut(s)	633
BseLI	CCNNNNNNNGG	6 cut(s)	98, 259, 478, 721, 776, 1119
BseMII	CTCAG	2 cut(s)	50, 288
BseRI	GAGGAG	4 cut(s)	131, 329, 389, 898
BseSI	GKGCMC	1 cut(s)	880
BseX3I	CGGCCG	1 cut(s)	368
BseXI	GCAGC	5 cut(s)	114, 492, 664, 753, 819
Bsh1236I	CGCG	3 cut(s)	288, 749, 785
Bsh1285I	CGRYCG	5 cut(s)	257, 371, 418, 479, 516
BshFI	GGCC	7 cut(s)	134, 370, 407, 572, 939, 1042, 1090
BshNI	GGYRCC	3 cut(s)	203, 262, 1015
BshTI	ACCGGT	1 cut(s)	79
BsiEI	CGRYCG	5 cut(s)	257, 371, 418, 479, 516
BsiHKAI	GWGCWC	2 cut(s)	522, 880
BsiHKCI	CYCGRG	2 cut(s)	401, 594
BslI	CCNNNNNNNGG	6 cut(s)	98, 259, 478, 721, 776, 1119
BsmAI	GTCTC	1 cut(s)	552
BsnI	GGCC	7 cut(s)	134, 370, 407, 572, 939, 1042, 1090
BsoBI	CYCGRG	2 cut(s)	401, 594
Bsp119I	TTCGAA	1 cut(s)	576
Bsp1286I	GDGCHC	3 cut(s)	336, 522, 880
Bsp1407I	TGTACA	2 cut(s)	192, 843
Bsp143I	GATC	4 cut(s)	120, 254, 350, 513
BspANI	GGCC	7 cut(s)	134, 370, 407, 572, 939, 1042, 1090
BspCNI	CTCAG	2 cut(s)	51, 289
BspFNI	CGCG	3 cut(s)	288, 749, 785
BspLI	GGNNCC	7 cut(s)	180, 205, 223, 264, 352, 406, 1017
BspMI	ACCTGC	1 cut(s)	33
BspPI	GGATC	2 cut(s)	345, 358
BspQI	GCTCTTC	2 cut(s)	341, 805
BspT104I	TTCGAA	1 cut(s)	576
BspT107I	GGYRCC	3 cut(s)	203, 262, 1015
BsrBI	CCGCTC	1 cut(s)	138
BsrFI	RCCGGY	8 cut(s)	79, 200, 478, 675, 800, 835, 939, 1048
BsrGI	TGTACA	2 cut(s)	192, 843
BssAI	RCCGGY	8 cut(s)	79, 200, 478, 675, 800, 835, 939, 1048
BssECI	CCNNGG	4 cut(s)	400, 641, 881, 992
BssMI	GATC	4 cut(s)	120, 254, 350, 513
BssNI	GRCGYC	5 cut(s)	14, 204, 263, 1016, 1109
BssSI	CACGAG	1 cut(s)	661
BssT1I	CCWWGG	1 cut(s)	992
Bst2BI	CACGAG	1 cut(s)	661
Bst4CI	ACNGT	2 cut(s)	908, 974
Bst6I	CTCTTC	3 cut(s)	341, 732, 805
BstACI	GRCGYC	5 cut(s)	14, 204, 263, 1016, 1109
BstAUI	TGTACA	2 cut(s)	192, 843
BstBI	TTCGAA	1 cut(s)	576
BstC8I	GCNNGC	7 cut(s)	136, 611, 648, 730, 802, 817, 1044
BstDEI	CTNAG	2 cut(s)	59, 297
BstDSI	CCRYGG	1 cut(s)	641
BstEII	GGTNACC	1 cut(s)	248
BstF5I	GGATG	1 cut(s)	633
BstFNI	CGCG	3 cut(s)	288, 749, 785
BstH2I	RGCGCY	4 cut(s)	66, 207, 266, 1019
BstHHI	GCGC	9 cut(s)	65, 206, 265, 288, 557, 652, 751, 1018, 1048
BstKTI	GATC	4 cut(s)	123, 257, 353, 516
BstMAI	GTCTC	1 cut(s)	552
BstMBI	GATC	4 cut(s)	120, 254, 350, 513
BstMCI	CGRYCG	5 cut(s)	257, 371, 418, 479, 516
BstNSI	RCATGY	1 cut(s)	388
BstPI	GGTNACC	1 cut(s)	248
BstSCI	CCNGG	5 cut(s)	129, 353, 407, 714, 769
BstSFI	CTRYAG	1 cut(s)	31
BstSLI	GKGCMC	1 cut(s)	880
BstUI	CGCG	3 cut(s)	288, 749, 785
BstV1I	GCAGC	5 cut(s)	114, 492, 664, 753, 819
BstV2I	GAAGAC	2 cut(s)	925, 993
BstX2I	RGATCY	1 cut(s)	350
BstYI	RGATCY	1 cut(s)	350
BstZI	CGGCCG	1 cut(s)	368
BsuRI	GGCC	7 cut(s)	134, 370, 407, 572, 939, 1042, 1090
BtgI	CCRYGG	1 cut(s)	641
BtrI	CACGTC	2 cut(s)	151, 535
BtsCI	GGATG	1 cut(s)	633
BtsI	GCAGTG	1 cut(s)	550
BtsIMutI	CAGTG	2 cut(s)	550, 1032
BveI	ACCTGC	1 cut(s)	33
Cac8I	GCNNGC	7 cut(s)	136, 611, 648, 730, 802, 817, 1044
CfoI	GCGC	9 cut(s)	65, 206, 265, 288, 557, 652, 751, 1018, 1048
Cfr10I	RCCGGY	8 cut(s)	79, 200, 478, 675, 800, 835, 939, 1048
Cfr13I	GGNCC	2 cut(s)	133, 405
CseI	GACGC	1 cut(s)	1117
Csp6I	GTAC	2 cut(s)	193, 844
CspAI	ACCGGT	1 cut(s)	79
CspCI	CAANNNNNGTGG	2 cut(s)	611, 646
CviAII	CATG	4 cut(s)	18, 196, 385, 1152
CviQI	GTAC	2 cut(s)	193, 844
DdeI	CTNAG	2 cut(s)	59, 297
DinI	GGCGCC	3 cut(s)	205, 264, 1017
DpnI	GATC	4 cut(s)	122, 256, 352, 515
DpnII	GATC	4 cut(s)	120, 254, 350, 513
DrdI	GACNNNNNNGTC	1 cut(s)	533
DseDI	GACNNNNNNGTC	1 cut(s)	533
EaeI	YGGCCR	2 cut(s)	368, 937
EagI	CGGCCG	1 cut(s)	368
Eam1104I	CTCTTC	3 cut(s)	341, 732, 805
EarI	CTCTTC	3 cut(s)	341, 732, 805
EciI	GGCGGA	3 cut(s)	130, 306, 792
Ecl136II	GAGCTC	1 cut(s)	520
EclXI	CGGCCG	1 cut(s)	368
Eco130I	CCWWGG	1 cut(s)	992
Eco147I	AGGCCT	2 cut(s)	572, 1042
Eco24I	GRGCYC	2 cut(s)	336, 522
Eco52I	CGGCCG	1 cut(s)	368
Eco53kI	GAGCTC	1 cut(s)	520
Eco88I	CYCGRG	2 cut(s)	401, 594
Eco91I	GGTNACC	1 cut(s)	248
EcoICRI	GAGCTC	1 cut(s)	520
EcoO65I	GGTNACC	1 cut(s)	248
EcoRI	GAATTC	1 cut(s)	1078
EcoT14I	CCWWGG	1 cut(s)	992
EcoT38I	GRGCYC	2 cut(s)	336, 522
EgeI	GGCGCC	3 cut(s)	205, 264, 1017
EheI	GGCGCC	3 cut(s)	205, 264, 1017
ErhI	CCWWGG	1 cut(s)	992
FaeI	CATG	4 cut(s)	21, 199, 388, 1155
FatI	CATG	4 cut(s)	17, 195, 384, 1151
FauI	CCCGC	3 cut(s)	143, 797, 854
FokI	GGATG	1 cut(s)	620
FriOI	GRGCYC	2 cut(s)	336, 522
FspBI	CTAG	2 cut(s)	165, 993
FspI	TGCGCA	1 cut(s)	651
GlaI	GCGC	9 cut(s)	64, 205, 264, 287, 556, 651, 750, 1017, 1047
HaeII	RGCGCY	4 cut(s)	66, 207, 266, 1019
HaeIII	GGCC	7 cut(s)	134, 370, 407, 572, 939, 1042, 1090
HgaI	GACGC	1 cut(s)	1117
HhaI	GCGC	9 cut(s)	65, 206, 265, 288, 557, 652, 751, 1018, 1048
Hin1I	GRCGYC	5 cut(s)	14, 204, 263, 1016, 1109
Hin1II	CATG	4 cut(s)	21, 199, 388, 1155
Hin6I	GCGC	9 cut(s)	63, 204, 263, 286, 555, 650, 749, 1016, 1046
HinP1I	GCGC	9 cut(s)	63, 204, 263, 286, 555, 650, 749, 1016, 1046
HincII	GTYRAC	1 cut(s)	1135
HindII	GTYRAC	1 cut(s)	1135
HpaI	GTTAAC	1 cut(s)	1135
HphI	GGTGA	3 cut(s)	260, 286, 1063
Hpy166II	GTNNAC	7 cut(s)	148, 844, 846, 856, 878, 1054, 1135
Hpy188I	TCNGA	5 cut(s)	60, 391, 628, 690, 1084
Hpy188III	TCNNGA	4 cut(s)	92, 424, 460, 596
Hpy8I	GTNNAC	7 cut(s)	148, 844, 846, 856, 878, 1054, 1135
HpyAV	CCTTC	1 cut(s)	583
HpyCH4III	ACNGT	2 cut(s)	908, 974
HpyCH4IV	ACGT	3 cut(s)	14, 150, 534
HpyCH4V	TGCA	4 cut(s)	564, 609, 633, 878
HpyF3I	CTNAG	2 cut(s)	59, 297
HpySE526I	ACGT	3 cut(s)	14, 150, 534
Hsp92I	GRCGYC	5 cut(s)	14, 204, 263, 1016, 1109
Hsp92II	CATG	4 cut(s)	21, 199, 388, 1155
HspAI	GCGC	9 cut(s)	63, 204, 263, 286, 555, 650, 749, 1016, 1046
KasI	GGCGCC	3 cut(s)	203, 262, 1015
KroI	GCCGGC	1 cut(s)	800
KroNI	GCCGGC	1 cut(s)	802
KspAI	GTTAAC	1 cut(s)	1135
Kzo9I	GATC	4 cut(s)	120, 254, 350, 513
LguI	GCTCTTC	2 cut(s)	341, 805
LmnI	GCTCC	6 cut(s)	143, 184, 227, 293, 829, 1012
Lsp1109I	GCAGC	5 cut(s)	114, 492, 664, 753, 819
LweI	GCATC	3 cut(s)	273, 591, 642
MaeI	CTAG	2 cut(s)	165, 993
MaeII	ACGT	3 cut(s)	14, 150, 534
MaeIII	GTNAC	3 cut(s)	248, 372, 1147
MalI	GATC	4 cut(s)	122, 256, 352, 515
MbiI	CCGCTC	1 cut(s)	138
MboI	GATC	4 cut(s)	120, 254, 350, 513
MboII	GAAGA	6 cut(s)	328, 749, 822, 927, 930, 993
MflI	RGATCY	1 cut(s)	350
MhlI	GDGCHC	3 cut(s)	336, 522, 880
MluCI	AATT	2 cut(s)	578, 1078
Mly113I	GGCGCC	3 cut(s)	204, 263, 1016
MlyI	GAGTC	5 cut(s)	509, 521, 554, 689, 804
MmeI	TCCRAC	2 cut(s)	369, 713
MreI	CGCCGGCG	1 cut(s)	800
MroNI	GCCGGC	1 cut(s)	800
MseI	TTAA	3 cut(s)	867, 969, 1134
MslI	CAYNNNNRTG	1 cut(s)	851
MspA1I	CMGCKG	2 cut(s)	105, 655
MspR9I	CCNGG	5 cut(s)	131, 355, 409, 716, 771
MvnI	CGCG	3 cut(s)	288, 749, 785
NaeI	GCCGGC	1 cut(s)	802
NarI	GGCGCC	3 cut(s)	204, 263, 1016
NciI	CCSGG	5 cut(s)	131, 355, 409, 716, 771
NdeII	GATC	4 cut(s)	120, 254, 350, 513
NgoMIV	GCCGGC	1 cut(s)	800
NlaIII	CATG	4 cut(s)	21, 199, 388, 1155
NlaIV	GGNNCC	7 cut(s)	180, 205, 223, 264, 352, 406, 1017
NmeAIII	GCCGAG	1 cut(s)	1044
NmuCI	GTSAC	2 cut(s)	248, 1147
NsbI	TGCGCA	1 cut(s)	651
NspI	RCATGY	1 cut(s)	388
NspV	TTCGAA	1 cut(s)	576
OliI	CACNNNNGTG	1 cut(s)	851
PceI	AGGCCT	2 cut(s)	572, 1042
PciI	ACATGT	1 cut(s)	384
PciSI	GCTCTTC	2 cut(s)	341, 805
PcsI	WCGNNNNNNNCGW	2 cut(s)	509, 540
PdiI	GCCGGC	1 cut(s)	802
PfeI	GAWTC	5 cut(s)	155, 327, 427, 456, 780
PflMI	CCANNNNNTGG	1 cut(s)	1119
PinAI	ACCGGT	1 cut(s)	79
Ple19I	CGATCG	2 cut(s)	257, 516
PleI	GAGTC	5 cut(s)	508, 521, 553, 689, 803
PluTI	GGCGCC	3 cut(s)	207, 266, 1019
PpsI	GAGTC	5 cut(s)	508, 521, 553, 689, 803
PscI	ACATGT	1 cut(s)	384
Psp124BI	GAGCTC	1 cut(s)	522
PspEI	GGTNACC	1 cut(s)	248
PspN4I	GGNNCC	7 cut(s)	180, 205, 223, 264, 352, 406, 1017
PspPI	GGNCC	2 cut(s)	133, 405
PsuI	RGATCY	1 cut(s)	350
PvuI	CGATCG	2 cut(s)	257, 516
RsaI	GTAC	2 cut(s)	194, 845
RsaNI	GTAC	2 cut(s)	193, 844
RseI	CAYNNNNRTG	1 cut(s)	851
SacI	GAGCTC	1 cut(s)	522
SapI	GCTCTTC	2 cut(s)	341, 805
SaqAI	TTAA	3 cut(s)	867, 969, 1134
Sau3AI	GATC	4 cut(s)	120, 254, 350, 513
Sau96I	GGNCC	2 cut(s)	133, 405
SchI	GAGTC	5 cut(s)	509, 521, 554, 689, 804
ScrFI	CCNGG	5 cut(s)	131, 355, 409, 716, 771
SduI	GDGCHC	3 cut(s)	336, 522, 880
SfaNI	GCATC	3 cut(s)	273, 591, 642
SfcI	CTRYAG	1 cut(s)	31
SfoI	GGCGCC	3 cut(s)	205, 264, 1017
SfuI	TTCGAA	1 cut(s)	576
SgrAI	CRCCGGYG	2 cut(s)	800, 1048
SmiMI	CAYNNNNRTG	1 cut(s)	851
SmlI	CTYRAG	1 cut(s)	521
SmoI	CTYRAG	1 cut(s)	521
Sse9I	AATT	2 cut(s)	578, 1078
SseBI	AGGCCT	2 cut(s)	572, 1042
SspDI	GGCGCC	3 cut(s)	203, 262, 1015
SspMI	CTAG	2 cut(s)	165, 993
SstI	GAGCTC	1 cut(s)	522
StuI	AGGCCT	2 cut(s)	572, 1042
StyD4I	CCNGG	5 cut(s)	129, 353, 407, 714, 769
StyI	CCWWGG	1 cut(s)	992
TaaI	ACNGT	2 cut(s)	908, 974
TaiI	ACGT	3 cut(s)	17, 153, 537
TaqI	TCGA	9 cut(s)	114, 153, 188, 414, 516, 576, 681, 899, 1076
TaqII	GACCGA	1 cut(s)	267
TasI	AATT	2 cut(s)	578, 1078
TatI	WGTACW	2 cut(s)	192, 843
TfiI	GAWTC	5 cut(s)	155, 327, 427, 456, 780
Tru1I	TTAA	3 cut(s)	867, 969, 1134
Tru9I	TTAA	3 cut(s)	867, 969, 1134
TscAI	CASTG	2 cut(s)	557, 1032
TseFI	GTSAC	2 cut(s)	248, 1147
TseI	GCWGC	5 cut(s)	102, 505, 652, 766, 832
Tsp45I	GTSAC	2 cut(s)	248, 1147
TspGWI	ACGGA	4 cut(s)	363, 468, 707, 863
TspRI	CASTG	2 cut(s)	557, 1032
Van91I	CCANNNNNTGG	1 cut(s)	1119
VneI	GTGCAC	1 cut(s)	876
XapI	RAATTY	1 cut(s)	1078
XceI	RCATGY	1 cut(s)	388
XmaJI	CCTAGG	1 cut(s)	992
XspI	CTAG	2 cut(s)	165, 993
ZraI	GACGTC	1 cut(s)	15

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.