Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0001214

Physical Location & Seq

Genomic Coordinates Reverse (-)

72492665 .. 72493741

Gene Structure 1077 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035839

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGTCATCGCCGTTGCCGACGACGTCGTATTGGTGCCACCGATGCACCCGCTTCGTCCGCATCTTCGTCCAAGATGCCTCCGTCACCTGCCCCTACTGCGACACCGGGTTCCTCGAAGAGATAGAGACGACCCCGCCGCCGGCGCCGACTCATCACCACCGTCGCTTCCCGCCCTCTTATGCTCACGATCAAGAACCCGGTCTGAACCCGGCTCCGACCTCCCGCCGGGTCCGCCGGGGCTCCGGCGACAGGTCGCCTTTTAATCCCGTCATCGTCCTACGTGGCGCCGCCGATGACTCCGAGTCGAGCTCGTTCGAGCTCTACTACGACGACGCTGCCGGGTCGGGGCTCCGGCCGCTTCCCCCCACCATGTCCGAGTTCTTAATGGGGTCGGGCTTTGACCGGTTGCTGGAGCAGCTGTCCCAGATCGAAATCACCGGGCTGGGCCGACCCGAGAACCCGCCCGCTTCCAAATCGGCCGTGGAGTCTATGCCGGTGATTAAAATCAACGAGTCCCACGTCAGGTCGGAGTCGCACTGCGCGGTCTGCAAAGAAGCTTTCGAATTCGGGTCGGAGGCCCGAGAAATGCCTTGCAACCACATATACCATTCGGATTGCATCCTCCCATGGCTCTCGATGCGAAACTCGTGCCCGGTCTGCCGGCACGAGCTGCCCGTTGACCGAAATTCGGATTCGGGTCACGACGAGGAGACCACCGGGTTGACTATCTGGAGATTACCCGGAGGCGGGTTCGCCGTGGGTCGGTTCTCGGGGGCGAGAAGAGCCGGGGAGCGCGAATTGCCGGTTGTGTACACTGAAATGGACGGCGGGTTTAACGGAAACGGGGCTCCGAGAAGGGTATTATGGCAATCGAGGAATAGAGGAAGAGAGAGCCGCGGGATTGGCTGGGCTTTCCGTAATTTAGCCTCGTTCTTGGGGAGGTTTAGGTCCAATTCGTCTTCGAGGACCGGGTCGGAAACCGGGTCCCGGGCATTTAGTCGCAGTCGGAGCCAGTCAAGCTCGGTGTTCGGTCGGTACCCGCAGCGCCGGAGCCGGGCTTGGGTCTTGGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010035 GO:0010154 GO:0010200 GO:0010243 GO:0010498 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0022412 GO:0022414 GO:0030154 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051603 GO:0051865 GO:0060560 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0097305 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

359

Amino Acids

39.91

Weight (kDa)

8.35

Isoelectric Point (pI)

80.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	8 - 41	3e-13	zinc-ribbon
zf-rbx1	PF12678	178 - 221	7.9e-07	RING-H2 zinc finger domain
zf-RING_2	PF13639	179 - 221	1e-12	Ring finger domain
zf-C3HC4_2	PF13923	180 - 220	3.9e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	180 - 220	1.9e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	180 - 207	2.4e-06	RING-like zinc finger
DUF1117	PF06547	240 - 345	1.6e-37	Protein of unknown function (DUF1117)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39720 AT2G39720 AT3G46620 AT5G59550 AT5G59550
fragaria_vesca	FvH4_3g36860 FvH4_6g13340 FvH4_7g22850
malus_domestica	MD01G1136700.v1.1 MD03G1087100.v1.1 MD04G1131800.v1.1 MD07G1201700.v1.1 MD10G1074300.v1.1 MD11G1012900.v1.1 MD11G1096200.v1.1 MD12G1144900.v1.1
prunus_persica	Prupe.2G238300_v2.0.a1 Prupe.6G071800_v2.0.a1 Prupe.6G258400_v2.0.a1
pyrus_communis	pycom01g15740 pycom03g06910 pycom04g11990 pycom07g18870 pycom11g08150 pycom12g13930
rosa_chinensis	RchiOBHm_Chr1g0368011 RchiOBHm_Chr3g0466231 RchiOBHm_Chr5g0066071
rosa_laevigata	RLG00000024595 RLG00000027247 RLG00000035839
rosa_multiflora	Rmu_co8242689.1_g000001 Rmu_co8418295.1_g000001 Rmu_sc0000350.1_g000012 Rmu_sc0002406.1_g000005 Rmu_sc0005240.1_g000003 Rmu_sc0005240.1_g000004
rosa_roxburghii	Rroxscaffold_1G00014940 Rroxscaffold_4G00288940 Rroxscaffold_6G00414710
rosa_rugosa	Rorug01G0338400 Rorug03G0080500 Rorug05G0376200
rosa_samantha	Rh1AG345200 Rh1BG307500 Rh1CG323100 Rh1DG339600 Rh3BG147700 Rh3DG148400 Rh5AG434600 Rh5BG450900 Rh5CG473200 Rh5DG464500
rosa_wichuraiana	Rw1G030720 Rw3G011940 Rw5G040700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	95
AatII	GACGTC	1 cut(s)	26
Acc36I	ACCTGC	1 cut(s)	95
Acc65I	GGTACC	1 cut(s)	1035
AccB1I	GGYRCC	4 cut(s)	33, 142, 284, 1035
AccII	CGCG	3 cut(s)	542, 795, 897
AcoI	YGGCCR	2 cut(s)	353, 477
AcsI	RAATTY	2 cut(s)	563, 685
AcyI	GRCGYC	3 cut(s)	23, 143, 285
AfaI	GTAC	2 cut(s)	812, 1037
AgeI	ACCGGT	1 cut(s)	402
AhdI	GACNNNNNGTC	1 cut(s)	301
AjiI	CACGTC	1 cut(s)	520
AluBI	AGCT	6 cut(s)	309, 319, 418, 557, 670, 1020
AluI	AGCT	6 cut(s)	309, 319, 418, 557, 670, 1020
Alw21I	GWGCWC	2 cut(s)	311, 321
Alw26I	GTCTC	2 cut(s)	119, 704
Ama87I	CYCGRG	4 cut(s)	452, 579, 769, 987
AoxI	GGCC	4 cut(s)	353, 445, 477, 576
ApeKI	GCWGC	4 cut(s)	335, 415, 670, 1042
ApoI	RAATTY	2 cut(s)	563, 685
AsiGI	ACCGGT	1 cut(s)	402
Asp718I	GGTACC	1 cut(s)	1035
AspLEI	GCGC	5 cut(s)	145, 287, 542, 795, 1047
AspS9I	GGNCC	6 cut(s)	229, 445, 577, 948, 966, 984
AsuHPI	GGTGA	4 cut(s)	76, 146, 427, 508
AsuII	TTCGAA	1 cut(s)	561
AvaI	CYCGRG	4 cut(s)	452, 579, 769, 987
AvaII	GGWCC	4 cut(s)	229, 948, 966, 984
BaeGI	GKGCMC	1 cut(s)	653
BanI	GGYRCC	4 cut(s)	33, 142, 284, 1035
BanII	GRGCYC	5 cut(s)	242, 311, 321, 351, 850
BauI	CACGAG	2 cut(s)	646, 665
BbsI	GAAGAC	1 cut(s)	951
Bbv12I	GWGCWC	2 cut(s)	311, 321
BbvI	GCAGC	4 cut(s)	322, 427, 657, 1054
BceAI	ACGGC	3 cut(s)	464, 740, 841
BcgI	CGANNNNNNTGC	6 cut(s)	34, 68, 317, 351, 630, 664
BcoDI	GTCTC	2 cut(s)	119, 704
BfoI	RGCGCY	3 cut(s)	146, 288, 1048
BfuAI	ACCTGC	1 cut(s)	95
BisI	GCNGC	8 cut(s)	137, 288, 336, 356, 416, 671, 895, 1043
BlsI	GCNGC	8 cut(s)	138, 289, 337, 357, 417, 672, 896, 1044
Bme18I	GGWCC	4 cut(s)	229, 948, 966, 984
BmeRI	GACNNNNNGTC	1 cut(s)	301
BmeT110I	CYCGRG	4 cut(s)	452, 579, 769, 987
BmgBI	CACGTC	1 cut(s)	520
BmgT120I	GGNCC	6 cut(s)	229, 445, 577, 948, 966, 984
BmsI	GCATC	5 cut(s)	32, 64, 69, 627, 627
BpiI	GAAGAC	1 cut(s)	951
BplI	GAGNNNNNCTC	2 cut(s)	293, 325
BpmI	CTGGAG	2 cut(s)	431, 751
Bpu14I	TTCGAA	1 cut(s)	561
BsaAI	YACGTR	1 cut(s)	281
BsaBI	GATNNNNATC	2 cut(s)	431, 503
BsaHI	GRCGYC	3 cut(s)	23, 143, 285
BsaI	GGTCTC	1 cut(s)	704
BsaJI	CCNNGG	7 cut(s)	235, 480, 626, 756, 786, 895, 987
BsaWI	WCCGGW	1 cut(s)	402
BsaXI	ACNNNNNCTCC	2 cut(s)	404, 434
Bse118I	RCCGGY	5 cut(s)	139, 402, 493, 660, 802
Bse1I	ACTGG	1 cut(s)	1012
Bse8I	GATNNNNATC	2 cut(s)	431, 503
BseDI	CCNNGG	7 cut(s)	235, 480, 626, 756, 786, 895, 987
BseGI	GGATG	2 cut(s)	618, 1075
BseJI	GATNNNNATC	2 cut(s)	431, 503
BseNI	ACTGG	1 cut(s)	1012
BseRI	GAGGAG	1 cut(s)	722
BseSI	GKGCMC	1 cut(s)	653
BseX3I	CGGCCG	2 cut(s)	353, 477
BseXI	GCAGC	4 cut(s)	322, 427, 657, 1054
BseYI	CCCAGC	2 cut(s)	442, 906
Bsh1236I	CGCG	3 cut(s)	542, 795, 897
Bsh1285I	CGRYCG	3 cut(s)	356, 480, 1033
BshFI	GGCC	4 cut(s)	355, 447, 479, 578
BshNI	GGYRCC	4 cut(s)	33, 142, 284, 1035
BshTI	ACCGGT	1 cut(s)	402
BsiEI	CGRYCG	3 cut(s)	356, 480, 1033
BsiHKAI	GWGCWC	2 cut(s)	311, 321
BsiHKCI	CYCGRG	4 cut(s)	452, 579, 769, 987
BslFI	GGGAC	3 cut(s)	406, 499, 970
BsmAI	GTCTC	2 cut(s)	119, 704
BsmBI	CGTCTC	1 cut(s)	119
BsmFI	GGGAC	3 cut(s)	406, 499, 970
BsnI	GGCC	4 cut(s)	355, 447, 479, 578
Bso31I	GGTCTC	1 cut(s)	704
BsoBI	CYCGRG	4 cut(s)	452, 579, 769, 987
Bsp119I	TTCGAA	1 cut(s)	561
Bsp1286I	GDGCHC	6 cut(s)	242, 311, 321, 351, 653, 850
Bsp1407I	TGTACA	1 cut(s)	810
Bsp143I	GATC	2 cut(s)	187, 426
Bsp19I	CCATGG	1 cut(s)	626
BspANI	GGCC	4 cut(s)	355, 447, 479, 578
BspFNI	CGCG	3 cut(s)	542, 795, 897
BspMI	ACCTGC	1 cut(s)	95
BspQI	GCTCTTC	1 cut(s)	775
BspT104I	TTCGAA	1 cut(s)	561
BspT107I	GGYRCC	4 cut(s)	33, 142, 284, 1035
BspTNI	GGTCTC	1 cut(s)	704
BsrFI	RCCGGY	5 cut(s)	139, 402, 493, 660, 802
BsrGI	TGTACA	1 cut(s)	810
BsrI	ACTGG	1 cut(s)	1012
BssAI	RCCGGY	5 cut(s)	139, 402, 493, 660, 802
BssECI	CCNNGG	7 cut(s)	235, 480, 626, 756, 786, 895, 987
BssMI	GATC	2 cut(s)	187, 426
BssNI	GRCGYC	3 cut(s)	23, 143, 285
BssSI	CACGAG	2 cut(s)	646, 665
BssT1I	CCWWGG	1 cut(s)	626
Bst2BI	CACGAG	2 cut(s)	646, 665
Bst4CI	ACNGT	1 cut(s)	161
Bst6I	CTCTTC	3 cut(s)	111, 775, 880
BstACI	GRCGYC	3 cut(s)	23, 143, 285
BstAPI	GCANNNNNTGC	1 cut(s)	670
BstAUI	TGTACA	1 cut(s)	810
BstBAI	YACGTR	1 cut(s)	281
BstBI	TTCGAA	1 cut(s)	561
BstC8I	GCNNGC	3 cut(s)	141, 465, 662
BstDSI	CCRYGG	4 cut(s)	480, 626, 756, 895
BstF5I	GGATG	2 cut(s)	618, 1075
BstFNI	CGCG	3 cut(s)	542, 795, 897
BstH2I	RGCGCY	3 cut(s)	146, 288, 1048
BstHHI	GCGC	5 cut(s)	145, 287, 542, 795, 1047
BstKTI	GATC	2 cut(s)	190, 429
BstMAI	GTCTC	2 cut(s)	119, 704
BstMBI	GATC	2 cut(s)	187, 426
BstMCI	CGRYCG	3 cut(s)	356, 480, 1033
BstSLI	GKGCMC	1 cut(s)	653
BstUI	CGCG	3 cut(s)	542, 795, 897
BstV1I	GCAGC	4 cut(s)	322, 427, 657, 1054
BstV2I	GAAGAC	1 cut(s)	951
BstZI	CGGCCG	2 cut(s)	353, 477
BsuRI	GGCC	4 cut(s)	355, 447, 479, 578
BtgI	CCRYGG	4 cut(s)	480, 626, 756, 895
BtrI	CACGTC	1 cut(s)	520
BtsCI	GGATG	2 cut(s)	618, 1075
BtsI	GCAGTG	1 cut(s)	535
BtsIMutI	CAGTG	2 cut(s)	535, 813
BveI	ACCTGC	1 cut(s)	95
Cac8I	GCNNGC	3 cut(s)	141, 465, 662
CfoI	GCGC	5 cut(s)	145, 287, 542, 795, 1047
Cfr10I	RCCGGY	5 cut(s)	139, 402, 493, 660, 802
Cfr13I	GGNCC	6 cut(s)	229, 445, 577, 948, 966, 984
Cfr42I	CCGCGG	1 cut(s)	898
Cfr9I	CCCGGG	1 cut(s)	987
CseI	GACGC	1 cut(s)	341
Csp6I	GTAC	2 cut(s)	811, 1036
CspAI	ACCGGT	1 cut(s)	402
CviAII	CATG	2 cut(s)	370, 627
CviQI	GTAC	2 cut(s)	811, 1036
DinI	GGCGCC	2 cut(s)	144, 286
DpnI	GATC	2 cut(s)	189, 428
DpnII	GATC	2 cut(s)	187, 426
DriI	GACNNNNNGTC	1 cut(s)	301
EaeI	YGGCCR	2 cut(s)	353, 477
EagI	CGGCCG	2 cut(s)	353, 477
Eam1104I	CTCTTC	3 cut(s)	111, 775, 880
Eam1105I	GACNNNNNGTC	1 cut(s)	301
EarI	CTCTTC	3 cut(s)	111, 775, 880
EciI	GGCGGA	1 cut(s)	221
Ecl136II	GAGCTC	2 cut(s)	309, 319
EclXI	CGGCCG	2 cut(s)	353, 477
Eco130I	CCWWGG	1 cut(s)	626
Eco24I	GRGCYC	5 cut(s)	242, 311, 321, 351, 850
Eco31I	GGTCTC	1 cut(s)	704
Eco47I	GGWCC	4 cut(s)	229, 948, 966, 984
Eco52I	CGGCCG	2 cut(s)	353, 477
Eco53kI	GAGCTC	2 cut(s)	309, 319
Eco88I	CYCGRG	4 cut(s)	452, 579, 769, 987
EcoICRI	GAGCTC	2 cut(s)	309, 319
EcoO109I	RGGNCCY	1 cut(s)	984
EcoRI	GAATTC	1 cut(s)	563
EcoT14I	CCWWGG	1 cut(s)	626
EcoT38I	GRGCYC	5 cut(s)	242, 311, 321, 351, 850
EgeI	GGCGCC	2 cut(s)	144, 286
EheI	GGCGCC	2 cut(s)	144, 286
ErhI	CCWWGG	1 cut(s)	626
Esp3I	CGTCTC	1 cut(s)	119
FaeI	CATG	2 cut(s)	373, 630
FaiI	YATR	7 cut(s)	180, 371, 491, 602, 604, 628, 865
FaqI	GGGAC	3 cut(s)	406, 499, 970
FatI	CATG	2 cut(s)	369, 626
Fnu4HI	GCNGC	8 cut(s)	137, 288, 336, 356, 416, 671, 895, 1043
FokI	GGATG	1 cut(s)	605
FriOI	GRGCYC	5 cut(s)	242, 311, 321, 351, 850
Fsp4HI	GCNGC	8 cut(s)	137, 288, 336, 356, 416, 671, 895, 1043
GlaI	GCGC	5 cut(s)	144, 286, 541, 794, 1046
GluI	GCNGC	8 cut(s)	137, 288, 336, 356, 416, 671, 895, 1043
GsaI	CCCAGC	2 cut(s)	446, 910
GsuI	CTGGAG	2 cut(s)	431, 751
HaeII	RGCGCY	3 cut(s)	146, 288, 1048
HaeIII	GGCC	4 cut(s)	355, 447, 479, 578
HgaI	GACGC	1 cut(s)	341
HhaI	GCGC	5 cut(s)	145, 287, 542, 795, 1047
Hin1I	GRCGYC	3 cut(s)	23, 143, 285
Hin1II	CATG	2 cut(s)	373, 630
Hin6I	GCGC	5 cut(s)	143, 285, 540, 793, 1045
HinP1I	GCGC	5 cut(s)	143, 285, 540, 793, 1045
HincII	GTYRAC	2 cut(s)	679, 723
HindII	GTYRAC	2 cut(s)	679, 723
HindIII	AAGCTT	1 cut(s)	555
HinfI	GANTC	7 cut(s)	148, 296, 302, 485, 512, 530, 692
HphI	GGTGA	4 cut(s)	76, 146, 427, 508
Hpy166II	GTNNAC	4 cut(s)	679, 723, 811, 813
Hpy188III	TCNNGA	5 cut(s)	185, 191, 634, 701, 730
Hpy8I	GTNNAC	4 cut(s)	679, 723, 811, 813
Hpy99I	CGWCG	7 cut(s)	22, 25, 28, 165, 332, 335, 707
HpyAV	CCTTC	1 cut(s)	849
HpyCH4III	ACNGT	1 cut(s)	161
HpyCH4IV	ACGT	3 cut(s)	23, 280, 519
HpyCH4V	TGCA	4 cut(s)	45, 549, 594, 618
HpySE526I	ACGT	3 cut(s)	23, 280, 519
Hsp92I	GRCGYC	3 cut(s)	23, 143, 285
Hsp92II	CATG	2 cut(s)	373, 630
HspAI	GCGC	5 cut(s)	143, 285, 540, 793, 1045
KasI	GGCGCC	2 cut(s)	142, 284
KflI	GGGWCCC	1 cut(s)	984
KpnI	GGTACC	1 cut(s)	1039
KroI	GCCGGC	2 cut(s)	139, 660
KroNI	GCCGGC	2 cut(s)	141, 662
KspI	CCGCGG	1 cut(s)	898
Kzo9I	GATC	2 cut(s)	187, 426
LguI	GCTCTTC	1 cut(s)	775
LmnI	GCTCC	8 cut(s)	217, 245, 354, 412, 790, 853, 1008, 1050
Lsp1109I	GCAGC	4 cut(s)	322, 427, 657, 1054
LweI	GCATC	5 cut(s)	32, 64, 69, 627, 627
MaeII	ACGT	3 cut(s)	23, 280, 519
MaeIII	GTNAC	2 cut(s)	82, 698
MalI	GATC	2 cut(s)	189, 428
MboI	GATC	2 cut(s)	187, 426
MboII	GAAGA	5 cut(s)	55, 128, 792, 897, 951
MhlI	GDGCHC	6 cut(s)	242, 311, 321, 351, 653, 850
MluCI	AATT	5 cut(s)	563, 685, 797, 919, 952
Mly113I	GGCGCC	2 cut(s)	143, 285
MlyI	GAGTC	6 cut(s)	142, 290, 311, 494, 521, 539
MmeI	TCCRAC	5 cut(s)	239, 507, 552, 954, 986
MreI	CGCCGGCG	1 cut(s)	139
MroNI	GCCGGC	2 cut(s)	139, 660
MseI	TTAA	4 cut(s)	261, 383, 501, 834
MslI	CAYNNNNRTG	1 cut(s)	818
MspA1I	CMGCKG	2 cut(s)	418, 897
MvnI	CGCG	3 cut(s)	542, 795, 897
NaeI	GCCGGC	2 cut(s)	141, 662
NarI	GGCGCC	2 cut(s)	143, 285
NcoI	CCATGG	1 cut(s)	626
NdeII	GATC	2 cut(s)	187, 426
NgoMIV	GCCGGC	2 cut(s)	139, 660
NlaIII	CATG	2 cut(s)	373, 630
NmuCI	GTSAC	2 cut(s)	82, 698
NspV	TTCGAA	1 cut(s)	561
PaqCI	CACCTGC	1 cut(s)	95
PciSI	GCTCTTC	1 cut(s)	775
PcsI	WCGNNNNNNNCGW	3 cut(s)	14, 516, 672
PdiI	GCCGGC	2 cut(s)	141, 662
PfeI	GAWTC	1 cut(s)	692
PflFI	GACNNNGTC	2 cut(s)	22, 970
PinAI	ACCGGT	1 cut(s)	402
PkrI	GCNGC	8 cut(s)	138, 289, 337, 357, 417, 672, 896, 1044
PleI	GAGTC	6 cut(s)	142, 290, 310, 493, 520, 538
PluTI	GGCGCC	2 cut(s)	146, 288
PpsI	GAGTC	6 cut(s)	142, 290, 310, 493, 520, 538
Ppu21I	YACGTR	1 cut(s)	281
PpuMI	RGGWCCY	1 cut(s)	984
Psp124BI	GAGCTC	2 cut(s)	311, 321
Psp5II	RGGWCCY	1 cut(s)	984
PspFI	CCCAGC	2 cut(s)	442, 906
PspPI	GGNCC	6 cut(s)	229, 445, 577, 948, 966, 984
PspPPI	RGGWCCY	1 cut(s)	984
PsyI	GACNNNGTC	2 cut(s)	22, 970
PvuII	CAGCTG	1 cut(s)	418
RsaI	GTAC	2 cut(s)	812, 1037
RsaNI	GTAC	2 cut(s)	811, 1036
RseI	CAYNNNNRTG	1 cut(s)	818
SacI	GAGCTC	2 cut(s)	311, 321
SacII	CCGCGG	1 cut(s)	898
SapI	GCTCTTC	1 cut(s)	775
SaqAI	TTAA	4 cut(s)	261, 383, 501, 834
SatI	GCNGC	8 cut(s)	137, 288, 336, 356, 416, 671, 895, 1043
Sau3AI	GATC	2 cut(s)	187, 426
Sau96I	GGNCC	6 cut(s)	229, 445, 577, 948, 966, 984
SchI	GAGTC	6 cut(s)	142, 290, 311, 494, 521, 539
SduI	GDGCHC	6 cut(s)	242, 311, 321, 351, 653, 850
SfaNI	GCATC	5 cut(s)	32, 64, 69, 627, 627
SfoI	GGCGCC	2 cut(s)	144, 286
Sfr303I	CCGCGG	1 cut(s)	898
SfuI	TTCGAA	1 cut(s)	561
SgrAI	CRCCGGYG	1 cut(s)	139
SgrBI	CCGCGG	1 cut(s)	898
SinI	GGWCC	4 cut(s)	229, 948, 966, 984
SmaI	CCCGGG	1 cut(s)	989
SmiMI	CAYNNNNRTG	1 cut(s)	818
Sse9I	AATT	5 cut(s)	563, 685, 797, 919, 952
SspDI	GGCGCC	2 cut(s)	142, 284
SstI	GAGCTC	2 cut(s)	311, 321
StyI	CCWWGG	1 cut(s)	626
TaaI	ACNGT	1 cut(s)	161
TaiI	ACGT	3 cut(s)	26, 283, 522
TaqI	TCGA	8 cut(s)	114, 305, 315, 429, 561, 635, 872, 962
TaqII	GACCGA	2 cut(s)	696, 1019
TasI	AATT	5 cut(s)	563, 685, 797, 919, 952
TatI	WGTACW	1 cut(s)	810
TauI	GCSGC	4 cut(s)	139, 290, 358, 897
TfiI	GAWTC	1 cut(s)	692
Tru1I	TTAA	4 cut(s)	261, 383, 501, 834
Tru9I	TTAA	4 cut(s)	261, 383, 501, 834
TscAI	CASTG	2 cut(s)	542, 820
TseFI	GTSAC	2 cut(s)	82, 698
TseI	GCWGC	4 cut(s)	335, 415, 670, 1042
Tsp45I	GTSAC	2 cut(s)	82, 698
TspGWI	ACGGA	3 cut(s)	70, 852, 905
TspMI	CCCGGG	1 cut(s)	987
TspRI	CASTG	2 cut(s)	542, 820
Tth111I	GACNNNGTC	2 cut(s)	22, 970
VpaK11BI	GGWCC	4 cut(s)	229, 948, 966, 984
XapI	RAATTY	2 cut(s)	563, 685
XcmI	CCANNNNNNNNNTGG	1 cut(s)	478
XmaI	CCCGGG	1 cut(s)	987
ZraI	GACGTC	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.