Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001214

Physical Location & Seq

Genomic Coordinates Reverse (-)

74741728 .. 74743880

Gene Structure 2153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG434600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1068 bp

ATGGCCATGTCATCGCCGTTGCCGACGACGTCGTATTGGTGCCACCGATGCACCCGCTTCGTCCGCATCTTCGTCCAAGACGCCTCCGTCACCTGCCCCTACTGCGACACCGGGTTCCTCGAAGAGATAGAGACGACTCCGCCGCCGGCGCCGACTCATCGCCACCGTCGCTCTTATGCTCACGATCAAGAACCGGGTCAGAACCCGGCTCTGACCTCCCGCCGGGTCCGCCGGAGCTCCGGCGACAGGTCGCCTTTTAATCCGGTCATCGTCCTACGTGGCGCGGCCGATGACTCCGAGTCGAGCTCGTTCGAGCTCTACTACGACGACGCTGCCGGGTCGGGGCTCCGGCCGCTTCCCCCCACCATGTCCGAGTTTTTAATGGGGTCGGGCTTTGATCGGTTGCTGGAGCAGCTGTCCCAGATCGAAATCACCGGGCTTGGCCGACCCGAGAACCCGCCCGCTTCCAAATCCGCCGTGGAGTCTATGCCGGTGATTAAAATCAACGAATCCCACGTCGGGTCGGAGTCGCACTGCGCGGTTTGCAAAGAAGCTTTCGAATTCGGGTCGGAGGCCCGGGAAATGCCTTGCAACCACATATACCATTCGGATTGCATCCTCCCATGGCTCTCGATGCGAAACTCGTGCCCGGTCTGCCGGCACGAGCTGCCCGTTGACCGAAATTCGGATTCGGGTCACGACGAGGAGACCACCGGGTTGACTATCTGGAGATTACCCGGAGGCGGGTTCGCCGTGGGTCGGTTTTCGGGCGGGAGAAGACCCGGGGAGCGCGAATTGCCGGTTGTGTACACTGAAATGGACGGCGGGTTTAACGGAAACGGAGCTCCGAGAAGGGTATTATGGCAATCGAGGAATAGAGGAAGAGAGAGCCGCGGGATTGGCTGGGCTTTCCGTAATTTGGCCTCGTTCTTGGGGAGGTTTAGGTCAAATTCGTCTTCGAGGACCGGGTCGGAAACCGGGTCCGGGGCATTTAGTCGGAGTCGGAGCCAGTCAAGGTTCGGTCGGTACGCGCAGCGCCGGAGCCGGGCTTGGGTCTTGGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010035 GO:0010154 GO:0010200 GO:0010243 GO:0010498 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0022412 GO:0022414 GO:0030154 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051603 GO:0051865 GO:0060560 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0097305 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

355

Amino Acids

39.52

Weight (kDa)

8.35

Isoelectric Point (pI)

80.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	10 - 43	2.9e-13	zinc-ribbon
zf-RING_2	PF13639	178 - 220	9.9e-13	Ring finger domain
zf-C3HC4_2	PF13923	179 - 219	3.8e-08	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	179 - 220	1.2e-06	RING-H2 zinc finger domain
zf-C3HC4	PF00097	179 - 219	1.8e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	179 - 206	2.3e-06	RING-like zinc finger
DUF1117	PF06547	239 - 340	7.6e-36	Protein of unknown function (DUF1117)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39720 AT2G39720 AT3G46620 AT5G59550 AT5G59550
fragaria_vesca	FvH4_3g36860 FvH4_6g13340 FvH4_7g22850
malus_domestica	MD01G1136700.v1.1 MD03G1087100.v1.1 MD04G1131800.v1.1 MD07G1201700.v1.1 MD10G1074300.v1.1 MD11G1012900.v1.1 MD11G1096200.v1.1 MD12G1144900.v1.1
prunus_persica	Prupe.2G238300_v2.0.a1 Prupe.6G071800_v2.0.a1 Prupe.6G258400_v2.0.a1
pyrus_communis	pycom01g15740 pycom03g06910 pycom04g11990 pycom07g18870 pycom11g08150 pycom12g13930
rosa_chinensis	RchiOBHm_Chr1g0368011 RchiOBHm_Chr3g0466231 RchiOBHm_Chr5g0066071
rosa_laevigata	RLG00000024595 RLG00000027247 RLG00000035839
rosa_multiflora	Rmu_co8242689.1_g000001 Rmu_co8418295.1_g000001 Rmu_sc0000350.1_g000012 Rmu_sc0002406.1_g000005 Rmu_sc0005240.1_g000003 Rmu_sc0005240.1_g000004
rosa_roxburghii	Rroxscaffold_1G00014940 Rroxscaffold_4G00288940 Rroxscaffold_6G00414710
rosa_rugosa	Rorug01G0338400 Rorug03G0080500 Rorug05G0376200
rosa_samantha	Rh1AG345200 Rh1BG307500 Rh1CG323100 Rh1DG339600 Rh3BG147700 Rh3DG148400 Rh5AG434600 Rh5BG450900 Rh5CG473200 Rh5DG464500
rosa_wichuraiana	Rw1G030720 Rw3G011940 Rw5G040700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	101
AasI	GACNNNNNNGTC	1 cut(s)	86
AatII	GACGTC	1 cut(s)	32
Acc36I	ACCTGC	1 cut(s)	101
AccB1I	GGYRCC	2 cut(s)	39, 148
AccII	CGCG	5 cut(s)	284, 539, 792, 894, 1031
AcoI	YGGCCR	4 cut(s)	3, 285, 350, 442
AcsI	RAATTY	3 cut(s)	560, 682, 949
AcyI	GRCGYC	3 cut(s)	29, 81, 149
AfaI	GTAC	2 cut(s)	809, 1028
AhdI	GACNNNNNGTC	1 cut(s)	298
AjiI	CACGTC	1 cut(s)	517
AluBI	AGCT	7 cut(s)	237, 306, 316, 415, 554, 667, 845
AluI	AGCT	7 cut(s)	237, 306, 316, 415, 554, 667, 845
Alw21I	GWGCWC	4 cut(s)	239, 308, 318, 847
Alw26I	GTCTC	2 cut(s)	125, 701
Ama87I	CYCGRG	3 cut(s)	449, 576, 782
AoxI	GGCC	6 cut(s)	3, 285, 350, 442, 573, 921
ApeKI	GCWGC	4 cut(s)	332, 412, 667, 1033
ApoI	RAATTY	3 cut(s)	560, 682, 949
ArsI	GACNNNNNNTTYG	2 cut(s)	501, 533
AspLEI	GCGC	6 cut(s)	151, 284, 539, 792, 1033, 1038
AspS9I	GGNCC	4 cut(s)	226, 574, 963, 981
AsuHPI	GGTGA	3 cut(s)	82, 424, 505
AsuII	TTCGAA	1 cut(s)	558
AvaI	CYCGRG	3 cut(s)	449, 576, 782
AvaII	GGWCC	3 cut(s)	226, 963, 981
BaeGI	GKGCMC	1 cut(s)	650
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	39, 148
BanII	GRGCYC	5 cut(s)	239, 308, 318, 348, 847
BauI	CACGAG	2 cut(s)	643, 662
BbsI	GAAGAC	2 cut(s)	784, 948
Bbv12I	GWGCWC	4 cut(s)	239, 308, 318, 847
BbvI	GCAGC	4 cut(s)	319, 424, 654, 1045
BceAI	ACGGC	3 cut(s)	461, 737, 838
BcgI	CGANNNNNNTGC	6 cut(s)	40, 74, 314, 348, 627, 661
BcoDI	GTCTC	2 cut(s)	125, 701
BfoI	RGCGCY	2 cut(s)	152, 1039
BfuAI	ACCTGC	1 cut(s)	101
BisI	GCNGC	8 cut(s)	143, 285, 333, 353, 413, 668, 892, 1034
BlsI	GCNGC	8 cut(s)	144, 286, 334, 354, 414, 669, 893, 1035
Bme18I	GGWCC	3 cut(s)	226, 963, 981
BmeRI	GACNNNNNGTC	1 cut(s)	298
BmeT110I	CYCGRG	3 cut(s)	449, 576, 782
BmgBI	CACGTC	1 cut(s)	517
BmgT120I	GGNCC	4 cut(s)	226, 574, 963, 981
BmiI	GGNNCC	8 cut(s)	41, 116, 150, 227, 347, 982, 1007, 1043
BmsI	GCATC	4 cut(s)	38, 75, 624, 624
BpiI	GAAGAC	2 cut(s)	784, 948
BplI	GAGNNNNNCTC	2 cut(s)	290, 322
BpmI	CTGGAG	2 cut(s)	428, 748
Bpu14I	TTCGAA	1 cut(s)	558
BsaAI	YACGTR	1 cut(s)	278
BsaBI	GATNNNNATC	2 cut(s)	428, 500
BsaHI	GRCGYC	3 cut(s)	29, 81, 149
BsaI	GGTCTC	1 cut(s)	701
BsaJI	CCNNGG	8 cut(s)	477, 576, 623, 753, 782, 783, 892, 984
BsaWI	WCCGGW	1 cut(s)	262
BsaXI	ACNNNNNCTCC	2 cut(s)	401, 431
Bse118I	RCCGGY	4 cut(s)	145, 490, 657, 799
Bse1I	ACTGG	1 cut(s)	1009
Bse8I	GATNNNNATC	2 cut(s)	428, 500
BseDI	CCNNGG	8 cut(s)	477, 576, 623, 753, 782, 783, 892, 984
BseGI	GGATG	2 cut(s)	615, 1066
BseJI	GATNNNNATC	2 cut(s)	428, 500
BseNI	ACTGG	1 cut(s)	1009
BseRI	GAGGAG	1 cut(s)	719
BseSI	GKGCMC	1 cut(s)	650
BseX3I	CGGCCG	2 cut(s)	285, 350
BseXI	GCAGC	4 cut(s)	319, 424, 654, 1045
BseYI	CCCAGC	1 cut(s)	903
Bsh1236I	CGCG	5 cut(s)	284, 539, 792, 894, 1031
Bsh1285I	CGRYCG	3 cut(s)	288, 353, 1024
BshFI	GGCC	6 cut(s)	5, 287, 352, 444, 575, 923
BshNI	GGYRCC	2 cut(s)	39, 148
BsiEI	CGRYCG	3 cut(s)	288, 353, 1024
BsiHKAI	GWGCWC	4 cut(s)	239, 308, 318, 847
BsiHKCI	CYCGRG	3 cut(s)	449, 576, 782
BslFI	GGGAC	1 cut(s)	403
BsmAI	GTCTC	2 cut(s)	125, 701
BsmBI	CGTCTC	1 cut(s)	125
BsmFI	GGGAC	1 cut(s)	403
BsnI	GGCC	6 cut(s)	5, 287, 352, 444, 575, 923
Bso31I	GGTCTC	1 cut(s)	701
BsoBI	CYCGRG	3 cut(s)	449, 576, 782
Bsp119I	TTCGAA	1 cut(s)	558
Bsp1286I	GDGCHC	6 cut(s)	239, 308, 318, 348, 650, 847
Bsp1407I	TGTACA	1 cut(s)	807
Bsp143I	GATC	3 cut(s)	184, 397, 423
Bsp19I	CCATGG	1 cut(s)	623
BspANI	GGCC	6 cut(s)	5, 287, 352, 444, 575, 923
BspFNI	CGCG	5 cut(s)	284, 539, 792, 894, 1031
BspLI	GGNNCC	8 cut(s)	41, 116, 150, 227, 347, 982, 1007, 1043
BspMI	ACCTGC	1 cut(s)	101
BspT104I	TTCGAA	1 cut(s)	558
BspT107I	GGYRCC	2 cut(s)	39, 148
BspTNI	GGTCTC	1 cut(s)	701
BsrFI	RCCGGY	4 cut(s)	145, 490, 657, 799
BsrGI	TGTACA	1 cut(s)	807
BsrI	ACTGG	1 cut(s)	1009
BssAI	RCCGGY	4 cut(s)	145, 490, 657, 799
BssECI	CCNNGG	8 cut(s)	477, 576, 623, 753, 782, 783, 892, 984
BssMI	GATC	3 cut(s)	184, 397, 423
BssNI	GRCGYC	3 cut(s)	29, 81, 149
BssSI	CACGAG	2 cut(s)	643, 662
BssT1I	CCWWGG	1 cut(s)	623
Bst2BI	CACGAG	2 cut(s)	643, 662
Bst4CI	ACNGT	1 cut(s)	167
Bst6I	CTCTTC	2 cut(s)	117, 877
BstACI	GRCGYC	3 cut(s)	29, 81, 149
BstAPI	GCANNNNNTGC	1 cut(s)	667
BstAUI	TGTACA	1 cut(s)	807
BstBAI	YACGTR	1 cut(s)	278
BstBI	TTCGAA	1 cut(s)	558
BstC8I	GCNNGC	3 cut(s)	147, 462, 659
BstDSI	CCRYGG	4 cut(s)	477, 623, 753, 892
BstF5I	GGATG	2 cut(s)	615, 1066
BstFNI	CGCG	5 cut(s)	284, 539, 792, 894, 1031
BstH2I	RGCGCY	2 cut(s)	152, 1039
BstHHI	GCGC	6 cut(s)	151, 284, 539, 792, 1033, 1038
BstKTI	GATC	3 cut(s)	187, 400, 426
BstMAI	GTCTC	2 cut(s)	125, 701
BstMBI	GATC	3 cut(s)	184, 397, 423
BstMCI	CGRYCG	3 cut(s)	288, 353, 1024
BstSLI	GKGCMC	1 cut(s)	650
BstUI	CGCG	5 cut(s)	284, 539, 792, 894, 1031
BstV1I	GCAGC	4 cut(s)	319, 424, 654, 1045
BstV2I	GAAGAC	2 cut(s)	784, 948
BstZI	CGGCCG	2 cut(s)	285, 350
BsuRI	GGCC	6 cut(s)	5, 287, 352, 444, 575, 923
BtgI	CCRYGG	4 cut(s)	477, 623, 753, 892
BtgZI	GCGATG	1 cut(s)	143
BtrI	CACGTC	1 cut(s)	517
BtsCI	GGATG	2 cut(s)	615, 1066
BtsI	GCAGTG	1 cut(s)	532
BtsIMutI	CAGTG	2 cut(s)	532, 810
BveI	ACCTGC	1 cut(s)	101
Cac8I	GCNNGC	3 cut(s)	147, 462, 659
CfoI	GCGC	6 cut(s)	151, 284, 539, 792, 1033, 1038
Cfr10I	RCCGGY	4 cut(s)	145, 490, 657, 799
Cfr13I	GGNCC	4 cut(s)	226, 574, 963, 981
Cfr42I	CCGCGG	1 cut(s)	895
Cfr9I	CCCGGG	2 cut(s)	576, 782
CseI	GACGC	2 cut(s)	89, 338
Csp6I	GTAC	2 cut(s)	808, 1027
CviAII	CATG	3 cut(s)	7, 367, 624
CviQI	GTAC	2 cut(s)	808, 1027
DinI	GGCGCC	1 cut(s)	150
DpnI	GATC	3 cut(s)	186, 399, 425
DpnII	GATC	3 cut(s)	184, 397, 423
DrdI	GACNNNNNNGTC	1 cut(s)	86
DriI	GACNNNNNGTC	1 cut(s)	298
DseDI	GACNNNNNNGTC	1 cut(s)	86
EaeI	YGGCCR	4 cut(s)	3, 285, 350, 442
EagI	CGGCCG	2 cut(s)	285, 350
Eam1104I	CTCTTC	2 cut(s)	117, 877
Eam1105I	GACNNNNNGTC	1 cut(s)	298
EarI	CTCTTC	2 cut(s)	117, 877
EciI	GGCGGA	3 cut(s)	129, 218, 463
Ecl136II	GAGCTC	4 cut(s)	237, 306, 316, 845
EclXI	CGGCCG	2 cut(s)	285, 350
Eco130I	CCWWGG	1 cut(s)	623
Eco24I	GRGCYC	5 cut(s)	239, 308, 318, 348, 847
Eco31I	GGTCTC	1 cut(s)	701
Eco47I	GGWCC	3 cut(s)	226, 963, 981
Eco52I	CGGCCG	2 cut(s)	285, 350
Eco53kI	GAGCTC	4 cut(s)	237, 306, 316, 845
Eco88I	CYCGRG	3 cut(s)	449, 576, 782
EcoICRI	GAGCTC	4 cut(s)	237, 306, 316, 845
EcoRI	GAATTC	1 cut(s)	560
EcoT14I	CCWWGG	1 cut(s)	623
EcoT38I	GRGCYC	5 cut(s)	239, 308, 318, 348, 847
EgeI	GGCGCC	1 cut(s)	150
EheI	GGCGCC	1 cut(s)	150
ErhI	CCWWGG	1 cut(s)	623
Esp3I	CGTCTC	1 cut(s)	125
FaeI	CATG	3 cut(s)	10, 370, 627
FaiI	YATR	8 cut(s)	8, 177, 368, 488, 599, 601, 625, 862
FaqI	GGGAC	1 cut(s)	403
FatI	CATG	3 cut(s)	6, 366, 623
FauI	CCCGC	8 cut(s)	62, 227, 465, 469, 737, 764, 818, 887
Fnu4HI	GCNGC	8 cut(s)	143, 285, 333, 353, 413, 668, 892, 1034
FokI	GGATG	1 cut(s)	602
FriOI	GRGCYC	5 cut(s)	239, 308, 318, 348, 847
Fsp4HI	GCNGC	8 cut(s)	143, 285, 333, 353, 413, 668, 892, 1034
GlaI	GCGC	6 cut(s)	150, 283, 538, 791, 1032, 1037
GluI	GCNGC	8 cut(s)	143, 285, 333, 353, 413, 668, 892, 1034
GsaI	CCCAGC	1 cut(s)	907
GsuI	CTGGAG	2 cut(s)	428, 748
HaeII	RGCGCY	2 cut(s)	152, 1039
HaeIII	GGCC	6 cut(s)	5, 287, 352, 444, 575, 923
HgaI	GACGC	2 cut(s)	89, 338
HhaI	GCGC	6 cut(s)	151, 284, 539, 792, 1033, 1038
Hin1I	GRCGYC	3 cut(s)	29, 81, 149
Hin1II	CATG	3 cut(s)	10, 370, 627
Hin6I	GCGC	6 cut(s)	149, 282, 537, 790, 1031, 1036
HinP1I	GCGC	6 cut(s)	149, 282, 537, 790, 1031, 1036
HincII	GTYRAC	2 cut(s)	676, 720
HindII	GTYRAC	2 cut(s)	676, 720
HindIII	AAGCTT	1 cut(s)	552
HinfI	GANTC	9 cut(s)	136, 154, 293, 299, 482, 509, 527, 689, 1000
HphI	GGTGA	3 cut(s)	82, 424, 505
Hpy166II	GTNNAC	4 cut(s)	676, 720, 808, 810
Hpy188III	TCNNGA	5 cut(s)	182, 188, 631, 698, 727
Hpy8I	GTNNAC	4 cut(s)	676, 720, 808, 810
Hpy99I	CGWCG	8 cut(s)	28, 31, 34, 171, 329, 332, 521, 704
HpyAV	CCTTC	1 cut(s)	846
HpyCH4III	ACNGT	1 cut(s)	167
HpyCH4IV	ACGT	3 cut(s)	29, 277, 516
HpyCH4V	TGCA	4 cut(s)	51, 546, 591, 615
HpySE526I	ACGT	3 cut(s)	29, 277, 516
Hsp92I	GRCGYC	3 cut(s)	29, 81, 149
Hsp92II	CATG	3 cut(s)	10, 370, 627
HspAI	GCGC	6 cut(s)	149, 282, 537, 790, 1031, 1036
KasI	GGCGCC	1 cut(s)	148
KroI	GCCGGC	2 cut(s)	145, 657
KroNI	GCCGGC	2 cut(s)	147, 659
KspI	CCGCGG	1 cut(s)	895
Kzo9I	GATC	3 cut(s)	184, 397, 423
LmnI	GCTCC	9 cut(s)	234, 242, 351, 409, 787, 842, 850, 1005, 1041
Lsp1109I	GCAGC	4 cut(s)	319, 424, 654, 1045
LweI	GCATC	4 cut(s)	38, 75, 624, 624
MaeII	ACGT	3 cut(s)	29, 277, 516
MaeIII	GTNAC	2 cut(s)	88, 695
MalI	GATC	3 cut(s)	186, 399, 425
MboI	GATC	3 cut(s)	184, 397, 423
MboII	GAAGA	5 cut(s)	61, 134, 789, 894, 948
MhlI	GDGCHC	6 cut(s)	239, 308, 318, 348, 650, 847
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	5 cut(s)	560, 682, 794, 916, 949
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	149
MlyI	GAGTC	7 cut(s)	130, 148, 287, 308, 491, 536, 1009
MmeI	TCCRAC	5 cut(s)	504, 549, 951, 977, 983
Mox20I	TGGCCA	1 cut(s)	5
MreI	CGCCGGCG	1 cut(s)	145
MroNI	GCCGGC	2 cut(s)	145, 657
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	4 cut(s)	258, 380, 498, 831
MslI	CAYNNNNRTG	1 cut(s)	815
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	415, 894
MteI	GCGCNGCGC	1 cut(s)	1034
MvnI	CGCG	5 cut(s)	284, 539, 792, 894, 1031
NaeI	GCCGGC	2 cut(s)	147, 659
NarI	GGCGCC	1 cut(s)	149
NcoI	CCATGG	1 cut(s)	623
NdeII	GATC	3 cut(s)	184, 397, 423
NgoMIV	GCCGGC	2 cut(s)	145, 657
NlaIII	CATG	3 cut(s)	10, 370, 627
NlaIV	GGNNCC	8 cut(s)	41, 116, 150, 227, 347, 982, 1007, 1043
NmuCI	GTSAC	2 cut(s)	88, 695
NspV	TTCGAA	1 cut(s)	558
PaqCI	CACCTGC	1 cut(s)	101
PcsI	WCGNNNNNNNCGW	3 cut(s)	20, 513, 669
PdiI	GCCGGC	2 cut(s)	147, 659
PfeI	GAWTC	2 cut(s)	509, 689
PflFI	GACNNNGTC	2 cut(s)	28, 967
PkrI	GCNGC	8 cut(s)	144, 286, 334, 354, 414, 669, 893, 1035
PleI	GAGTC	7 cut(s)	130, 148, 287, 307, 490, 535, 1008
PluTI	GGCGCC	1 cut(s)	152
PpsI	GAGTC	7 cut(s)	130, 148, 287, 307, 490, 535, 1008
Ppu21I	YACGTR	1 cut(s)	278
Psp124BI	GAGCTC	4 cut(s)	239, 308, 318, 847
PspFI	CCCAGC	1 cut(s)	903
PspN4I	GGNNCC	8 cut(s)	41, 116, 150, 227, 347, 982, 1007, 1043
PspPI	GGNCC	4 cut(s)	226, 574, 963, 981
PsyI	GACNNNGTC	2 cut(s)	28, 967
PvuII	CAGCTG	1 cut(s)	415
RsaI	GTAC	2 cut(s)	809, 1028
RsaNI	GTAC	2 cut(s)	808, 1027
RseI	CAYNNNNRTG	1 cut(s)	815
SacI	GAGCTC	4 cut(s)	239, 308, 318, 847
SacII	CCGCGG	1 cut(s)	895
SaqAI	TTAA	4 cut(s)	258, 380, 498, 831
SatI	GCNGC	8 cut(s)	143, 285, 333, 353, 413, 668, 892, 1034
Sau3AI	GATC	3 cut(s)	184, 397, 423
Sau96I	GGNCC	4 cut(s)	226, 574, 963, 981
SchI	GAGTC	7 cut(s)	130, 148, 287, 308, 491, 536, 1009
SduI	GDGCHC	6 cut(s)	239, 308, 318, 348, 650, 847
SfaNI	GCATC	4 cut(s)	38, 75, 624, 624
SfoI	GGCGCC	1 cut(s)	150
Sfr303I	CCGCGG	1 cut(s)	895
SfuI	TTCGAA	1 cut(s)	558
SgrAI	CRCCGGYG	1 cut(s)	145
SgrBI	CCGCGG	1 cut(s)	895
SinI	GGWCC	3 cut(s)	226, 963, 981
SmaI	CCCGGG	2 cut(s)	578, 784
SmiMI	CAYNNNNRTG	1 cut(s)	815
Sse9I	AATT	5 cut(s)	560, 682, 794, 916, 949
SspDI	GGCGCC	1 cut(s)	148
SstI	GAGCTC	4 cut(s)	239, 308, 318, 847
StyI	CCWWGG	1 cut(s)	623
TaaI	ACNGT	1 cut(s)	167
TaiI	ACGT	3 cut(s)	32, 280, 519
TaqI	TCGA	8 cut(s)	120, 302, 312, 426, 558, 632, 869, 959
TaqII	GACCGA	2 cut(s)	693, 1010
TasI	AATT	5 cut(s)	560, 682, 794, 916, 949
TatI	WGTACW	1 cut(s)	807
TauI	GCSGC	4 cut(s)	145, 287, 355, 894
TfiI	GAWTC	2 cut(s)	509, 689
Tru1I	TTAA	4 cut(s)	258, 380, 498, 831
Tru9I	TTAA	4 cut(s)	258, 380, 498, 831
TscAI	CASTG	2 cut(s)	539, 817
TseFI	GTSAC	2 cut(s)	88, 695
TseI	GCWGC	4 cut(s)	332, 412, 667, 1033
Tsp45I	GTSAC	2 cut(s)	88, 695
TspGWI	ACGGA	4 cut(s)	76, 849, 855, 902
TspMI	CCCGGG	2 cut(s)	576, 782
TspRI	CASTG	2 cut(s)	539, 817
Tth111I	GACNNNGTC	2 cut(s)	28, 967
VpaK11BI	GGWCC	3 cut(s)	226, 963, 981
XapI	RAATTY	3 cut(s)	560, 682, 949
XcmI	CCANNNNNNNNNTGG	1 cut(s)	475
XmaI	CCCGGG	2 cut(s)	576, 782
ZraI	GACGTC	1 cut(s)	30

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.