Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001214

Physical Location & Seq

Genomic Coordinates Reverse (-)

27975682 .. 27976896

Gene Structure 1215 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1201700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGTCCGCGGCGACGCCGTCTTACTGGTGCTACAGATGTTGCCGCTTCGTTAGGGTTTTCAACGACGCCGACGTTTCCACCGTCTCCGCCGTATCTTCCTCAGTGTTGTGCCCGGACTGCGAGAGTGGCTTCGTGGAGGAGATCGACAACCCGACCCGCTCTGGAAACGTGGACTCGCGCCGCAGCAGGAGGTTCCCAGCTGCCGCGATGTACATGATCGGAACCAACAATGGCTCCGGTTCCAATCCGGATCATACCGCGTCTGGTCCTTCGGGACCTCGAAGAGTTCGACGAAACAACGGCGACCGCTCACCGTTCAATCCAGTCATCGTCCTACGCGGAACAACGGCGGACAGTGCCGCCACCACCGAGGAAGGCCGCGGATTCGACCTTTTTTACGACGACGGCAGCGGCTCGGGGCTCCGGCCCTTGCCTGCAAGCATGTCCGAGTTTTTACTCGGGTCCGGGTTCGACCGCCTACTTGAACAGCTGTCGCAGATTGAGATCAACGGAATCGGCGGATGCGAGCAGAGATCGGCGTCGAGATTGGCGATTGAGTCGATGCCAACGATCAAACTTGACGACGCTCACATAACGGCGGAGCATCACTGCGCCGTGTGCAAGGAAGCGTTCGAAGTAGGCACGGAAGCTCGGGAAATGCCCTGTAAGCATATATACCACTCCGATTGTATACTGCCGTGGCTTGCGCTCCGGAATTCGTGTCCCGTGTGCAGGCACGAGCTGCCGGCCGATTCGTCGCCCGAGACGGGTCAGGGTCCGGGTCAGCAGGAAGACGAAAACGCGGGTCTTACGATCTGGAGGCTGCCTGGGGGCGGATTCGCGGTGGGGAGATATAGCGGGGGGACTAGAGGCGCCGAGAGAGAGCTGCCGGTGGTGTATACCGAGATGGACGGCGGGTTTAGCGGCGGCGGAGCGCCGAGGAGGATTTCGTGGTCGAGAAATGGTGGAAGACGGCGACAGAGCGGTGGGTTGAGGAGGTTTTTTATGAATCTGTTTGCTTGTTTTAGCGGGGGTGGGTCGTCGGCAGCGAGTTTGGGTAGGGGTTCGGAAATGAGGCTTGGGACGCCGACGCCACCTCCGTCGACGAGTCATCAAAGACTGAGGTTTATGGAATTGGAACCGGCGGAGACGGCGACGCCAAGTCGGCGGAGGACTTGGTCTATGGACGTGAATAGCGGTATTGTGAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010154 GO:0010498 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0022412 GO:0022414 GO:0030154 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0036211 GO:0040007 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0051603 GO:0060560 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

405

Amino Acids

43.76

Weight (kDa)

7.06

Isoelectric Point (pI)

71.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	7 - 48	8.6e-07	zinc-ribbon
zf-rbx1	PF12678	201 - 245	2.4e-06	RING-H2 zinc finger domain
zf-RING_2	PF13639	203 - 245	6e-12	Ring finger domain
zf-C3HC4_2	PF13923	204 - 244	2.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	204 - 231	1.7e-07	RING-like zinc finger
zf-C3HC4	PF00097	204 - 244	2.2e-06	Zinc finger, C3HC4 type (RING finger)
DUF1117	PF06547	269 - 351	3.4e-36	Protein of unknown function (DUF1117)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39720 AT2G39720 AT3G46620 AT5G59550 AT5G59550
fragaria_vesca	FvH4_3g36860 FvH4_6g13340 FvH4_7g22850
malus_domestica	MD01G1136700.v1.1 MD03G1087100.v1.1 MD04G1131800.v1.1 MD07G1201700.v1.1 MD10G1074300.v1.1 MD11G1012900.v1.1 MD11G1096200.v1.1 MD12G1144900.v1.1
prunus_persica	Prupe.2G238300_v2.0.a1 Prupe.6G071800_v2.0.a1 Prupe.6G258400_v2.0.a1
pyrus_communis	pycom01g15740 pycom03g06910 pycom04g11990 pycom07g18870 pycom11g08150 pycom12g13930
rosa_chinensis	RchiOBHm_Chr1g0368011 RchiOBHm_Chr3g0466231 RchiOBHm_Chr5g0066071
rosa_laevigata	RLG00000024595 RLG00000027247 RLG00000035839
rosa_multiflora	Rmu_co8242689.1_g000001 Rmu_co8418295.1_g000001 Rmu_sc0000350.1_g000012 Rmu_sc0002406.1_g000005 Rmu_sc0005240.1_g000003 Rmu_sc0005240.1_g000004
rosa_roxburghii	Rroxscaffold_1G00014940 Rroxscaffold_4G00288940 Rroxscaffold_6G00414710
rosa_rugosa	Rorug01G0338400 Rorug03G0080500 Rorug05G0376200
rosa_samantha	Rh1AG345200 Rh1BG307500 Rh1CG323100 Rh1DG339600 Rh3BG147700 Rh3DG148400 Rh5AG434600 Rh5BG450900 Rh5CG473200 Rh5DG464500
rosa_wichuraiana	Rw1G030720 Rw3G011940 Rw5G040700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	872
AccBSI	CCGCTC	3 cut(s)	159, 309, 984
AccI	GTMKAC	3 cut(s)	691, 899, 1103
AccII	CGCG	8 cut(s)	8, 178, 206, 260, 339, 381, 803, 842
AccIII	TCCGGA	2 cut(s)	247, 711
AclWI	GGATC	1 cut(s)	258
AcoI	YGGCCR	1 cut(s)	747
AcsI	RAATTY	1 cut(s)	715
AcyI	GRCGYC	7 cut(s)	14, 66, 539, 873, 1085, 1091, 1157
AfaI	GTAC	1 cut(s)	212
AfiI	CCNNNNNNNGG	3 cut(s)	732, 767, 833
AgsI	TTSAA	3 cut(s)	61, 319, 485
AhdI	GACNNNNNGTC	1 cut(s)	1161
AjiI	CACGTC	1 cut(s)	1189
AjnI	CCWGG	1 cut(s)	826
AjuI	GAANNNNNNNTTGG	2 cut(s)	1062, 1094
AluBI	AGCT	5 cut(s)	200, 490, 650, 742, 886
AluI	AGCT	5 cut(s)	200, 490, 650, 742, 886
Alw26I	GTCTC	3 cut(s)	88, 758, 1142
AlwI	GGATC	1 cut(s)	258
Ama87I	CYCGRG	4 cut(s)	415, 458, 651, 761
Aor13HI	TCCGGA	2 cut(s)	247, 711
AoxI	GGCC	3 cut(s)	376, 425, 747
ApeKI	GCWGC	7 cut(s)	183, 200, 408, 742, 823, 886, 1046
ApoI	RAATTY	1 cut(s)	715
AspLEI	GCGC	5 cut(s)	180, 614, 709, 875, 937
AspS9I	GGNCC	5 cut(s)	266, 275, 426, 462, 776
AsuC2I	CCSGG	3 cut(s)	113, 466, 780
AsuHPI	GGTGA	1 cut(s)	303
AsuII	TTCGAA	1 cut(s)	633
AvaI	CYCGRG	4 cut(s)	415, 458, 651, 761
AvaII	GGWCC	4 cut(s)	266, 275, 462, 776
BaeGI	GKGCMC	1 cut(s)	113
BanI	GGYRCC	1 cut(s)	872
BanII	GRGCYC	1 cut(s)	423
BauI	CACGAG	1 cut(s)	737
BbsI	GAAGAC	2 cut(s)	798, 976
BbvI	GCAGC	7 cut(s)	187, 195, 420, 729, 810, 873, 1058
BccI	CCATC	2 cut(s)	901, 1203
BciT130I	CCWGG	1 cut(s)	828
BcnI	CCSGG	3 cut(s)	113, 466, 780
BcoDI	GTCTC	3 cut(s)	88, 758, 1142
BfaI	CTAG	1 cut(s)	867
BfmI	CTRYAG	1 cut(s)	31
BfoI	RGCGCY	2 cut(s)	876, 938
BglI	GCCNNNNNGGC	1 cut(s)	1165
Bme1390I	CCNGG	4 cut(s)	113, 466, 780, 828
Bme18I	GGWCC	4 cut(s)	266, 275, 462, 776
BmeRI	GACNNNNNGTC	1 cut(s)	1161
BmeT110I	CYCGRG	4 cut(s)	415, 458, 651, 761
BmgBI	CACGTC	1 cut(s)	1189
BmgT120I	GGNCC	5 cut(s)	266, 275, 426, 462, 776
BmrFI	CCNGG	4 cut(s)	113, 466, 780, 828
BmsI	GCATC	3 cut(s)	512, 552, 613
BpiI	GAAGAC	2 cut(s)	798, 976
BpmI	CTGGAG	1 cut(s)	838
Bpu14I	TTCGAA	1 cut(s)	633
BpuMI	CCSGG	3 cut(s)	113, 466, 780
BsaBI	GATNNNNATC	1 cut(s)	503
BsaHI	GRCGYC	7 cut(s)	14, 66, 539, 873, 1085, 1091, 1157
BsaJI	CCNNGG	6 cut(s)	6, 369, 379, 698, 827, 938
BsaWI	WCCGGW	3 cut(s)	236, 247, 711
BsaXI	ACNNNNNCTCC	4 cut(s)	218, 248, 1081, 1111
Bsc4I	CCNNNNNNNGG	3 cut(s)	732, 767, 833
Bse118I	RCCGGY	3 cut(s)	745, 889, 1141
Bse1I	ACTGG	2 cut(s)	29, 323
Bse8I	GATNNNNATC	1 cut(s)	503
BseAI	TCCGGA	2 cut(s)	247, 711
BseBI	CCWGG	1 cut(s)	828
BseDI	CCNNGG	6 cut(s)	6, 369, 379, 698, 827, 938
BseGI	GGATG	1 cut(s)	527
BseJI	GATNNNNATC	1 cut(s)	503
BseLI	CCNNNNNNNGG	3 cut(s)	732, 767, 833
BseMII	CTCAG	2 cut(s)	114, 1112
BseNI	ACTGG	2 cut(s)	29, 323
BseRI	GAGGAG	3 cut(s)	152, 955, 1009
BseSI	GKGCMC	1 cut(s)	113
BseX3I	CGGCCG	1 cut(s)	747
BseXI	GCAGC	7 cut(s)	187, 195, 420, 729, 810, 873, 1058
BseYI	CCCAGC	1 cut(s)	196
BsgI	GTGCAG	1 cut(s)	751
Bsh1236I	CGCG	8 cut(s)	8, 178, 206, 260, 339, 381, 803, 842
Bsh1285I	CGRYCG	3 cut(s)	307, 475, 750
BshFI	GGCC	3 cut(s)	378, 427, 749
BshNI	GGYRCC	1 cut(s)	872
BsiEI	CGRYCG	3 cut(s)	307, 475, 750
BsiHKCI	CYCGRG	4 cut(s)	415, 458, 651, 761
BslFI	GGGAC	4 cut(s)	288, 708, 877, 1096
BslI	CCNNNNNNNGG	3 cut(s)	732, 767, 833
BsmAI	GTCTC	3 cut(s)	88, 758, 1142
BsmBI	CGTCTC	3 cut(s)	88, 758, 1142
BsmFI	GGGAC	4 cut(s)	288, 708, 877, 1096
BsnI	GGCC	3 cut(s)	378, 427, 749
BsoBI	CYCGRG	4 cut(s)	415, 458, 651, 761
Bsp119I	TTCGAA	1 cut(s)	633
Bsp1286I	GDGCHC	2 cut(s)	113, 423
Bsp13I	TCCGGA	2 cut(s)	247, 711
Bsp1407I	TGTACA	1 cut(s)	210
Bsp143I	GATC	7 cut(s)	141, 216, 250, 504, 533, 570, 813
BspANI	GGCC	3 cut(s)	378, 427, 749
BspCNI	CTCAG	2 cut(s)	113, 1113
BspEI	TCCGGA	2 cut(s)	247, 711
BspFNI	CGCG	8 cut(s)	8, 178, 206, 260, 339, 381, 803, 842
BspPI	GGATC	1 cut(s)	258
BspT104I	TTCGAA	1 cut(s)	633
BspT107I	GGYRCC	1 cut(s)	872
BsrBI	CCGCTC	3 cut(s)	159, 309, 984
BsrFI	RCCGGY	3 cut(s)	745, 889, 1141
BsrGI	TGTACA	1 cut(s)	210
BsrI	ACTGG	2 cut(s)	29, 323
BssAI	RCCGGY	3 cut(s)	745, 889, 1141
BssECI	CCNNGG	6 cut(s)	6, 369, 379, 698, 827, 938
BssMI	GATC	7 cut(s)	141, 216, 250, 504, 533, 570, 813
BssNAI	GTATAC	2 cut(s)	692, 900
BssNI	GRCGYC	7 cut(s)	14, 66, 539, 873, 1085, 1091, 1157
BssSI	CACGAG	1 cut(s)	737
Bst1107I	GTATAC	2 cut(s)	692, 900
Bst2BI	CACGAG	1 cut(s)	737
Bst2UI	CCWGG	1 cut(s)	828
Bst4CI	ACNGT	3 cut(s)	82, 315, 356
Bst6I	CTCTTC	1 cut(s)	277
BstACI	GRCGYC	7 cut(s)	14, 66, 539, 873, 1085, 1091, 1157
BstAPI	GCANNNNNTGC	1 cut(s)	742
BstAUI	TGTACA	1 cut(s)	210
BstBI	TTCGAA	1 cut(s)	633
BstC8I	GCNNGC	6 cut(s)	435, 439, 527, 705, 734, 747
BstDEI	CTNAG	2 cut(s)	100, 1121
BstDSI	CCRYGG	3 cut(s)	6, 379, 698
BstF5I	GGATG	1 cut(s)	527
BstFNI	CGCG	8 cut(s)	8, 178, 206, 260, 339, 381, 803, 842
BstH2I	RGCGCY	2 cut(s)	876, 938
BstHHI	GCGC	5 cut(s)	180, 614, 709, 875, 937
BstKTI	GATC	7 cut(s)	144, 219, 253, 507, 536, 573, 816
BstMAI	GTCTC	3 cut(s)	88, 758, 1142
BstMBI	GATC	7 cut(s)	141, 216, 250, 504, 533, 570, 813
BstMCI	CGRYCG	3 cut(s)	307, 475, 750
BstNI	CCWGG	1 cut(s)	828
BstNSI	RCATGY	1 cut(s)	445
BstSCI	CCNGG	4 cut(s)	111, 464, 778, 826
BstSFI	CTRYAG	1 cut(s)	31
BstSLI	GKGCMC	1 cut(s)	113
BstUI	CGCG	8 cut(s)	8, 178, 206, 260, 339, 381, 803, 842
BstV1I	GCAGC	7 cut(s)	187, 195, 420, 729, 810, 873, 1058
BstV2I	GAAGAC	2 cut(s)	798, 976
BstZ17I	GTATAC	2 cut(s)	692, 900
BstZI	CGGCCG	1 cut(s)	747
BsuRI	GGCC	3 cut(s)	378, 427, 749
BtgI	CCRYGG	3 cut(s)	6, 379, 698
BtgZI	GCGATG	1 cut(s)	221
BtrI	CACGTC	1 cut(s)	1189
BtsCI	GGATG	1 cut(s)	527
BtsI	GCAGTG	1 cut(s)	607
BtsIMutI	CAGTG	3 cut(s)	108, 361, 607
Cac8I	GCNNGC	6 cut(s)	435, 439, 527, 705, 734, 747
CfoI	GCGC	5 cut(s)	180, 614, 709, 875, 937
Cfr10I	RCCGGY	3 cut(s)	745, 889, 1141
Cfr13I	GGNCC	5 cut(s)	266, 275, 426, 462, 776
Cfr42I	CCGCGG	2 cut(s)	9, 382
CseI	GACGC	8 cut(s)	22, 74, 249, 528, 593, 1093, 1099, 1165
Csp6I	GTAC	1 cut(s)	211
CspCI	CAANNNNNGTGG	2 cut(s)	668, 703
CviAII	CATG	2 cut(s)	214, 442
CviQI	GTAC	1 cut(s)	211
DdeI	CTNAG	2 cut(s)	100, 1121
DinI	GGCGCC	1 cut(s)	874
DpnI	GATC	7 cut(s)	143, 218, 252, 506, 535, 572, 815
DpnII	GATC	7 cut(s)	141, 216, 250, 504, 533, 570, 813
DriI	GACNNNNNGTC	1 cut(s)	1161
EaeI	YGGCCR	1 cut(s)	747
EagI	CGGCCG	1 cut(s)	747
Eam1104I	CTCTTC	1 cut(s)	277
Eam1105I	GACNNNNNGTC	1 cut(s)	1161
EarI	CTCTTC	1 cut(s)	277
EciI	GGCGGA	8 cut(s)	76, 365, 534, 614, 849, 945, 1160, 1183
EclXI	CGGCCG	1 cut(s)	747
Eco24I	GRGCYC	1 cut(s)	423
Eco47I	GGWCC	4 cut(s)	266, 275, 462, 776
Eco52I	CGGCCG	1 cut(s)	747
Eco88I	CYCGRG	4 cut(s)	415, 458, 651, 761
EcoO109I	RGGNCCY	1 cut(s)	275
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	1 cut(s)	826
EcoT38I	GRGCYC	1 cut(s)	423
EgeI	GGCGCC	1 cut(s)	874
EheI	GGCGCC	1 cut(s)	874
Esp3I	CGTCTC	3 cut(s)	88, 758, 1142
FaeI	CATG	2 cut(s)	217, 445
FaqI	GGGAC	4 cut(s)	288, 708, 877, 1096
FatI	CATG	2 cut(s)	213, 441
FauI	CCCGC	5 cut(s)	164, 796, 851, 908, 1022
FblI	GTMKAC	3 cut(s)	691, 899, 1103
FokI	GGATG	1 cut(s)	534
FriOI	GRGCYC	1 cut(s)	423
FspBI	CTAG	1 cut(s)	867
GlaI	GCGC	5 cut(s)	179, 613, 708, 874, 936
GsaI	CCCAGC	1 cut(s)	200
GsuI	CTGGAG	1 cut(s)	838
HaeII	RGCGCY	2 cut(s)	876, 938
HaeIII	GGCC	3 cut(s)	378, 427, 749
HgaI	GACGC	8 cut(s)	22, 74, 249, 528, 593, 1093, 1099, 1165
HhaI	GCGC	5 cut(s)	180, 614, 709, 875, 937
Hin1I	GRCGYC	7 cut(s)	14, 66, 539, 873, 1085, 1091, 1157
Hin1II	CATG	2 cut(s)	217, 445
Hin6I	GCGC	5 cut(s)	178, 612, 707, 873, 935
HinP1I	GCGC	5 cut(s)	178, 612, 707, 873, 935
HincII	GTYRAC	1 cut(s)	1104
HindII	GTYRAC	1 cut(s)	1104
HinfI	GANTC	8 cut(s)	173, 384, 513, 557, 752, 837, 1009, 1108
HphI	GGTGA	1 cut(s)	303
Hpy166II	GTNNAC	4 cut(s)	172, 692, 900, 1104
Hpy188I	TCNGA	4 cut(s)	221, 448, 685, 1069
Hpy188III	TCNNGA	8 cut(s)	162, 248, 273, 543, 653, 712, 817, 957
Hpy8I	GTNNAC	4 cut(s)	172, 692, 900, 1104
HpyAV	CCTTC	2 cut(s)	279, 368
HpyCH4III	ACNGT	3 cut(s)	82, 315, 356
HpyCH4IV	ACGT	3 cut(s)	72, 168, 1188
HpyCH4V	TGCA	3 cut(s)	437, 621, 732
HpyF3I	CTNAG	2 cut(s)	100, 1121
HpySE526I	ACGT	3 cut(s)	72, 168, 1188
Hsp92I	GRCGYC	7 cut(s)	14, 66, 539, 873, 1085, 1091, 1157
Hsp92II	CATG	2 cut(s)	217, 445
HspAI	GCGC	5 cut(s)	178, 612, 707, 873, 935
KasI	GGCGCC	1 cut(s)	872
Kpn2I	TCCGGA	2 cut(s)	247, 711
KroI	GCCGGC	1 cut(s)	745
KroNI	GCCGGC	1 cut(s)	747
KspI	CCGCGG	2 cut(s)	9, 382
Kzo9I	GATC	7 cut(s)	141, 216, 250, 504, 533, 570, 813
LmnI	GCTCC	5 cut(s)	239, 426, 601, 714, 932
Lsp1109I	GCAGC	7 cut(s)	187, 195, 420, 729, 810, 873, 1058
LweI	GCATC	3 cut(s)	512, 552, 613
MaeI	CTAG	1 cut(s)	867
MaeII	ACGT	3 cut(s)	72, 168, 1188
MalI	GATC	7 cut(s)	143, 218, 252, 506, 535, 572, 815
MbiI	CCGCTC	3 cut(s)	159, 309, 984
MboI	GATC	7 cut(s)	141, 216, 250, 504, 533, 570, 813
MboII	GAAGA	4 cut(s)	87, 294, 803, 981
MhlI	GDGCHC	2 cut(s)	113, 423
MluCI	AATT	2 cut(s)	715, 1133
Mly113I	GGCGCC	1 cut(s)	873
MlyI	GAGTC	3 cut(s)	167, 566, 1117
MroI	TCCGGA	2 cut(s)	247, 711
MroNI	GCCGGC	1 cut(s)	745
MspA1I	CMGCKG	5 cut(s)	8, 200, 381, 411, 490
MspR9I	CCNGG	4 cut(s)	113, 466, 780, 828
MvaI	CCWGG	1 cut(s)	828
MvnI	CGCG	8 cut(s)	8, 178, 206, 260, 339, 381, 803, 842
NaeI	GCCGGC	1 cut(s)	747
NarI	GGCGCC	1 cut(s)	873
NciI	CCSGG	3 cut(s)	113, 466, 780
NdeII	GATC	7 cut(s)	141, 216, 250, 504, 533, 570, 813
NgoMIV	GCCGGC	1 cut(s)	745
NlaIII	CATG	2 cut(s)	217, 445
NmeAIII	GCCGAG	2 cut(s)	901, 963
NspI	RCATGY	1 cut(s)	445
NspV	TTCGAA	1 cut(s)	633
PcsI	WCGNNNNNNNCGW	8 cut(s)	69, 78, 286, 522, 548, 566, 1046, 1097
PdiI	GCCGGC	1 cut(s)	747
PfeI	GAWTC	5 cut(s)	384, 513, 752, 837, 1009
PflFI	GACNNNGTC	2 cut(s)	16, 1177
PleI	GAGTC	3 cut(s)	167, 565, 1116
PluTI	GGCGCC	1 cut(s)	876
PpsI	GAGTC	3 cut(s)	167, 565, 1116
PpuMI	RGGWCCY	1 cut(s)	275
Psp5II	RGGWCCY	1 cut(s)	275
Psp6I	CCWGG	1 cut(s)	826
PspFI	CCCAGC	1 cut(s)	196
PspGI	CCWGG	1 cut(s)	826
PspPI	GGNCC	5 cut(s)	266, 275, 426, 462, 776
PspPPI	RGGWCCY	1 cut(s)	275
PsyI	GACNNNGTC	2 cut(s)	16, 1177
PvuII	CAGCTG	2 cut(s)	200, 490
RsaI	GTAC	1 cut(s)	212
RsaNI	GTAC	1 cut(s)	211
SacII	CCGCGG	2 cut(s)	9, 382
SalI	GTCGAC	1 cut(s)	1102
Sau3AI	GATC	7 cut(s)	141, 216, 250, 504, 533, 570, 813
Sau96I	GGNCC	5 cut(s)	266, 275, 426, 462, 776
SchI	GAGTC	3 cut(s)	167, 566, 1117
ScrFI	CCNGG	4 cut(s)	113, 466, 780, 828
SduI	GDGCHC	2 cut(s)	113, 423
SfaNI	GCATC	3 cut(s)	512, 552, 613
SfcI	CTRYAG	1 cut(s)	31
SfoI	GGCGCC	1 cut(s)	874
Sfr303I	CCGCGG	2 cut(s)	9, 382
SfuI	TTCGAA	1 cut(s)	633
SgrBI	CCGCGG	2 cut(s)	9, 382
SgrDI	CGTCGACG	1 cut(s)	1102
SinI	GGWCC	4 cut(s)	266, 275, 462, 776
Sse9I	AATT	2 cut(s)	715, 1133
SspDI	GGCGCC	1 cut(s)	872
SspMI	CTAG	1 cut(s)	867
StyD4I	CCNGG	4 cut(s)	111, 464, 778, 826
TaaI	ACNGT	3 cut(s)	82, 315, 356
TaiI	ACGT	3 cut(s)	75, 171, 1191
TasI	AATT	2 cut(s)	715, 1133
TatI	WGTACW	1 cut(s)	210
TauI	GCSGC	9 cut(s)	11, 45, 183, 206, 362, 381, 414, 927, 930
TfiI	GAWTC	5 cut(s)	384, 513, 752, 837, 1009
TscAI	CASTG	3 cut(s)	108, 361, 614
TseI	GCWGC	7 cut(s)	183, 200, 408, 742, 823, 886, 1046
TspDTI	ATGAA	1 cut(s)	1022
TspGWI	ACGGA	3 cut(s)	525, 659, 1089
TspRI	CASTG	3 cut(s)	108, 361, 614
Tth111I	GACNNNGTC	2 cut(s)	16, 1177
VpaK11BI	GGWCC	4 cut(s)	266, 275, 462, 776
XapI	RAATTY	1 cut(s)	715
XceI	RCATGY	1 cut(s)	445
XmiI	GTMKAC	3 cut(s)	691, 899, 1103
XspI	CTAG	1 cut(s)	867

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.