Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001214

Physical Location & Seq

Genomic Coordinates Reverse (-)

71947069 .. 71948144

Gene Structure 1076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G040700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGGCCATGTCATCGCCGTTGCCGACGACGTCGTATTGGTGCCACCGATGCACCCGCTTCGTCCGCATCTTCGTCCAAGACGCCTCCGTCACCTGCCCCTACTGCGACACCGGGTTCCTCGAAGAGATAGAGACGACTCCGCCGCCGGCGCCGACTCATCGCCACCGTCGCTTCCCGCCCTCTTATGCTCACGATCAAGAACCGGGTCAGAACCCGGCTCCTACCTCCCGCCGGGTCCGCCGGAGCTCCGGCGACAGGTCGCCTTTTAATCCGGTCATCGTCCTACGTGGCGCGGCTGATGACTCCGAGTCGAGCTCGTTCGAGCTCTACTATGACGACGCTGCCGGGTCGGGGCTCCGGCCTCTTCCCCCCACCATGTCTGAGTTTTTATGGGGTCGGATCGAAATCACCGGGCTTGGCCGACCCGAGAACCCGCCCGCTTCCAAATCCGCCGTGGAGTCTATGCCGGTGATTAAAATCAACGAATCCCACGTCGGGTCGGAGTCGCACTGCGCGGTTTGCAAAGAAGCTTTCGAATTCGGGTCGGAGGCCCGGGAAATGCCTTGCAACCACATATACCATTCGGATTGCATCCTCCCATGGCTCTCGATGCGAAACTCGTGCCCGGTCTGCCGGCACGAGCTGCCCGTTGACCGAAATTCGGATTCGGGTCACGACGAGGAGACCACCGGGTTGACTATCTGGAGATTACCCGGAGGCGGGTTCGCCGTGGGTCGGTTTTCGGGCGGGAGAAGACCCGGGGAGCGTGAATTGCCGGTTGTGTACACTGAAATGGACGGCGGGTTTAACGGAAACGGGGCTCCGAGAAGGGTATTATGGCAATCGAGGAATAGAGGAAGAGAGAGCCGCGGGATTGGCTGGGCTTTCCGTAATTTGGCCTCGTTCTTGGGGAGGTTTAGGTCAAATTCGTCTTCGAGGACCGGGTCGGAAACCGGGTCCGGGGCATTTAGTCGGAGTCGGAGCCAGTCAAGGTTCGGTCGGTACGCGCAGCGCCGGAGCCGGGCTTGGGTCTTGGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009826 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010035 GO:0010154 GO:0010200 GO:0010243 GO:0010498 GO:0016043 GO:0016049 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0022412 GO:0022414 GO:0030154 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048468 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051603 GO:0051865 GO:0060560 GO:0061458 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0090376 GO:0090378 GO:0090558 GO:0097305 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1117 zf-RING_2 zinc_ribbon_9

Protein Analysis

347

Amino Acids

38.68

Weight (kDa)

8.72

Isoelectric Point (pI)

82.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_19	PF14369	10 - 43	2.9e-13	zinc-ribbon
zf-RING_2	PF13639	170 - 212	9.6e-13	Ring finger domain
zf-C3HC4_2	PF13923	171 - 211	3.7e-08	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	171 - 212	1.2e-06	RING-H2 zinc finger domain
zf-C3HC4	PF00097	171 - 211	1.8e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	171 - 198	2.3e-06	RING-like zinc finger
zf-RING_UBOX	PF13445	171 - 209	6.5e-06	RING-type zinc-finger
DUF1117	PF06547	231 - 332	7.3e-36	Protein of unknown function (DUF1117)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001214)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39720 AT2G39720 AT3G46620 AT5G59550 AT5G59550
fragaria_vesca	FvH4_3g36860 FvH4_6g13340 FvH4_7g22850
malus_domestica	MD01G1136700.v1.1 MD03G1087100.v1.1 MD04G1131800.v1.1 MD07G1201700.v1.1 MD10G1074300.v1.1 MD11G1012900.v1.1 MD11G1096200.v1.1 MD12G1144900.v1.1
prunus_persica	Prupe.2G238300_v2.0.a1 Prupe.6G071800_v2.0.a1 Prupe.6G258400_v2.0.a1
pyrus_communis	pycom01g15740 pycom03g06910 pycom04g11990 pycom07g18870 pycom11g08150 pycom12g13930
rosa_chinensis	RchiOBHm_Chr1g0368011 RchiOBHm_Chr3g0466231 RchiOBHm_Chr5g0066071
rosa_laevigata	RLG00000024595 RLG00000027247 RLG00000035839
rosa_multiflora	Rmu_co8242689.1_g000001 Rmu_co8418295.1_g000001 Rmu_sc0000350.1_g000012 Rmu_sc0002406.1_g000005 Rmu_sc0005240.1_g000003 Rmu_sc0005240.1_g000004
rosa_roxburghii	Rroxscaffold_1G00014940 Rroxscaffold_4G00288940 Rroxscaffold_6G00414710
rosa_rugosa	Rorug01G0338400 Rorug03G0080500 Rorug05G0376200
rosa_samantha	Rh1AG345200 Rh1BG307500 Rh1CG323100 Rh1DG339600 Rh3BG147700 Rh3DG148400 Rh5AG434600 Rh5BG450900 Rh5CG473200 Rh5DG464500
rosa_wichuraiana	Rw1G030720 Rw3G011940 Rw5G040700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	101
AasI	GACNNNNNNGTC	1 cut(s)	86
AatII	GACGTC	1 cut(s)	32
Acc36I	ACCTGC	1 cut(s)	101
AccB1I	GGYRCC	2 cut(s)	39, 148
AccII	CGCG	4 cut(s)	293, 515, 870, 1007
AclWI	GGATC	1 cut(s)	407
AcoI	YGGCCR	2 cut(s)	3, 418
AcsI	RAATTY	3 cut(s)	536, 658, 925
AcyI	GRCGYC	3 cut(s)	29, 81, 149
AfaI	GTAC	2 cut(s)	785, 1004
AhdI	GACNNNNNGTC	1 cut(s)	307
AjiI	CACGTC	1 cut(s)	493
AluBI	AGCT	5 cut(s)	246, 315, 325, 530, 643
AluI	AGCT	5 cut(s)	246, 315, 325, 530, 643
Alw21I	GWGCWC	3 cut(s)	248, 317, 327
Alw26I	GTCTC	2 cut(s)	125, 677
AlwI	GGATC	1 cut(s)	407
Ama87I	CYCGRG	3 cut(s)	425, 552, 758
AoxI	GGCC	5 cut(s)	3, 359, 418, 549, 897
ApeKI	GCWGC	3 cut(s)	341, 643, 1009
ApoI	RAATTY	3 cut(s)	536, 658, 925
ArsI	GACNNNNNNTTYG	2 cut(s)	477, 509
AspLEI	GCGC	5 cut(s)	151, 293, 515, 1009, 1014
AspS9I	GGNCC	4 cut(s)	235, 550, 939, 957
AsuHPI	GGTGA	3 cut(s)	82, 400, 481
AsuII	TTCGAA	1 cut(s)	534
AvaI	CYCGRG	3 cut(s)	425, 552, 758
AvaII	GGWCC	3 cut(s)	235, 939, 957
BaeGI	GKGCMC	1 cut(s)	626
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	39, 148
BanII	GRGCYC	5 cut(s)	248, 317, 327, 357, 823
BauI	CACGAG	2 cut(s)	619, 638
BbsI	GAAGAC	2 cut(s)	760, 924
Bbv12I	GWGCWC	3 cut(s)	248, 317, 327
BbvI	GCAGC	3 cut(s)	328, 630, 1021
BceAI	ACGGC	3 cut(s)	437, 713, 814
BcgI	CGANNNNNNTGC	4 cut(s)	40, 74, 603, 637
BcoDI	GTCTC	2 cut(s)	125, 677
BfoI	RGCGCY	2 cut(s)	152, 1015
BfuAI	ACCTGC	1 cut(s)	101
BisI	GCNGC	6 cut(s)	143, 294, 342, 644, 868, 1010
BlsI	GCNGC	6 cut(s)	144, 295, 343, 645, 869, 1011
Bme18I	GGWCC	3 cut(s)	235, 939, 957
BmeRI	GACNNNNNGTC	1 cut(s)	307
BmeT110I	CYCGRG	3 cut(s)	425, 552, 758
BmgBI	CACGTC	1 cut(s)	493
BmgT120I	GGNCC	4 cut(s)	235, 550, 939, 957
BmsI	GCATC	4 cut(s)	38, 75, 600, 600
BpiI	GAAGAC	2 cut(s)	760, 924
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	1 cut(s)	724
Bpu14I	TTCGAA	1 cut(s)	534
BsaAI	YACGTR	1 cut(s)	287
BsaBI	GATNNNNATC	2 cut(s)	404, 476
BsaHI	GRCGYC	3 cut(s)	29, 81, 149
BsaI	GGTCTC	1 cut(s)	677
BsaJI	CCNNGG	8 cut(s)	453, 552, 599, 729, 758, 759, 868, 960
BsaWI	WCCGGW	1 cut(s)	271
Bse118I	RCCGGY	4 cut(s)	145, 466, 633, 775
Bse1I	ACTGG	1 cut(s)	985
Bse8I	GATNNNNATC	2 cut(s)	404, 476
BseDI	CCNNGG	8 cut(s)	453, 552, 599, 729, 758, 759, 868, 960
BseGI	GGATG	2 cut(s)	591, 1042
BseJI	GATNNNNATC	2 cut(s)	404, 476
BseMII	CTCAG	1 cut(s)	372
BseNI	ACTGG	1 cut(s)	985
BseRI	GAGGAG	1 cut(s)	695
BseSI	GKGCMC	1 cut(s)	626
BseXI	GCAGC	3 cut(s)	328, 630, 1021
BseYI	CCCAGC	1 cut(s)	879
Bsh1236I	CGCG	4 cut(s)	293, 515, 870, 1007
Bsh1285I	CGRYCG	1 cut(s)	1000
BshFI	GGCC	5 cut(s)	5, 361, 420, 551, 899
BshNI	GGYRCC	2 cut(s)	39, 148
BsiEI	CGRYCG	1 cut(s)	1000
BsiHKAI	GWGCWC	3 cut(s)	248, 317, 327
BsiHKCI	CYCGRG	3 cut(s)	425, 552, 758
BsmAI	GTCTC	2 cut(s)	125, 677
BsmBI	CGTCTC	1 cut(s)	125
BsnI	GGCC	5 cut(s)	5, 361, 420, 551, 899
Bso31I	GGTCTC	1 cut(s)	677
BsoBI	CYCGRG	3 cut(s)	425, 552, 758
Bsp119I	TTCGAA	1 cut(s)	534
Bsp1286I	GDGCHC	6 cut(s)	248, 317, 327, 357, 626, 823
Bsp1407I	TGTACA	1 cut(s)	783
Bsp143I	GATC	2 cut(s)	193, 399
Bsp19I	CCATGG	1 cut(s)	599
BspANI	GGCC	5 cut(s)	5, 361, 420, 551, 899
BspCNI	CTCAG	1 cut(s)	373
BspFNI	CGCG	4 cut(s)	293, 515, 870, 1007
BspMI	ACCTGC	1 cut(s)	101
BspPI	GGATC	1 cut(s)	407
BspT104I	TTCGAA	1 cut(s)	534
BspT107I	GGYRCC	2 cut(s)	39, 148
BspTNI	GGTCTC	1 cut(s)	677
BsrFI	RCCGGY	4 cut(s)	145, 466, 633, 775
BsrGI	TGTACA	1 cut(s)	783
BsrI	ACTGG	1 cut(s)	985
BssAI	RCCGGY	4 cut(s)	145, 466, 633, 775
BssECI	CCNNGG	8 cut(s)	453, 552, 599, 729, 758, 759, 868, 960
BssMI	GATC	2 cut(s)	193, 399
BssNI	GRCGYC	3 cut(s)	29, 81, 149
BssSI	CACGAG	2 cut(s)	619, 638
BssT1I	CCWWGG	1 cut(s)	599
Bst2BI	CACGAG	2 cut(s)	619, 638
Bst4CI	ACNGT	1 cut(s)	167
Bst6I	CTCTTC	3 cut(s)	117, 369, 853
BstACI	GRCGYC	3 cut(s)	29, 81, 149
BstAPI	GCANNNNNTGC	1 cut(s)	643
BstAUI	TGTACA	1 cut(s)	783
BstBAI	YACGTR	1 cut(s)	287
BstBI	TTCGAA	1 cut(s)	534
BstC8I	GCNNGC	3 cut(s)	147, 438, 635
BstDEI	CTNAG	1 cut(s)	381
BstDSI	CCRYGG	4 cut(s)	453, 599, 729, 868
BstF5I	GGATG	2 cut(s)	591, 1042
BstFNI	CGCG	4 cut(s)	293, 515, 870, 1007
BstH2I	RGCGCY	2 cut(s)	152, 1015
BstHHI	GCGC	5 cut(s)	151, 293, 515, 1009, 1014
BstKTI	GATC	2 cut(s)	196, 402
BstMAI	GTCTC	2 cut(s)	125, 677
BstMBI	GATC	2 cut(s)	193, 399
BstMCI	CGRYCG	1 cut(s)	1000
BstSLI	GKGCMC	1 cut(s)	626
BstUI	CGCG	4 cut(s)	293, 515, 870, 1007
BstV1I	GCAGC	3 cut(s)	328, 630, 1021
BstV2I	GAAGAC	2 cut(s)	760, 924
BsuRI	GGCC	5 cut(s)	5, 361, 420, 551, 899
BtgI	CCRYGG	4 cut(s)	453, 599, 729, 868
BtgZI	GCGATG	1 cut(s)	143
BtrI	CACGTC	1 cut(s)	493
BtsCI	GGATG	2 cut(s)	591, 1042
BtsI	GCAGTG	1 cut(s)	508
BtsIMutI	CAGTG	2 cut(s)	508, 786
BveI	ACCTGC	1 cut(s)	101
Cac8I	GCNNGC	3 cut(s)	147, 438, 635
CfoI	GCGC	5 cut(s)	151, 293, 515, 1009, 1014
Cfr10I	RCCGGY	4 cut(s)	145, 466, 633, 775
Cfr13I	GGNCC	4 cut(s)	235, 550, 939, 957
Cfr42I	CCGCGG	1 cut(s)	871
Cfr9I	CCCGGG	2 cut(s)	552, 758
CseI	GACGC	2 cut(s)	89, 347
Csp6I	GTAC	2 cut(s)	784, 1003
CviAII	CATG	3 cut(s)	7, 376, 600
CviQI	GTAC	2 cut(s)	784, 1003
DdeI	CTNAG	1 cut(s)	381
DinI	GGCGCC	1 cut(s)	150
DpnI	GATC	2 cut(s)	195, 401
DpnII	GATC	2 cut(s)	193, 399
DrdI	GACNNNNNNGTC	1 cut(s)	86
DriI	GACNNNNNGTC	1 cut(s)	307
DseDI	GACNNNNNNGTC	1 cut(s)	86
EaeI	YGGCCR	2 cut(s)	3, 418
Eam1104I	CTCTTC	3 cut(s)	117, 369, 853
Eam1105I	GACNNNNNGTC	1 cut(s)	307
EarI	CTCTTC	3 cut(s)	117, 369, 853
EciI	GGCGGA	3 cut(s)	129, 227, 439
Ecl136II	GAGCTC	3 cut(s)	246, 315, 325
Eco130I	CCWWGG	1 cut(s)	599
Eco24I	GRGCYC	5 cut(s)	248, 317, 327, 357, 823
Eco31I	GGTCTC	1 cut(s)	677
Eco47I	GGWCC	3 cut(s)	235, 939, 957
Eco53kI	GAGCTC	3 cut(s)	246, 315, 325
Eco88I	CYCGRG	3 cut(s)	425, 552, 758
EcoICRI	GAGCTC	3 cut(s)	246, 315, 325
EcoRI	GAATTC	1 cut(s)	536
EcoT14I	CCWWGG	1 cut(s)	599
EcoT38I	GRGCYC	5 cut(s)	248, 317, 327, 357, 823
EgeI	GGCGCC	1 cut(s)	150
EheI	GGCGCC	1 cut(s)	150
ErhI	CCWWGG	1 cut(s)	599
Esp3I	CGTCTC	1 cut(s)	125
FaeI	CATG	3 cut(s)	10, 379, 603
FatI	CATG	3 cut(s)	6, 375, 599
FauI	CCCGC	9 cut(s)	62, 183, 236, 441, 445, 713, 740, 794, 863
Fnu4HI	GCNGC	6 cut(s)	143, 294, 342, 644, 868, 1010
FokI	GGATG	1 cut(s)	578
FriOI	GRGCYC	5 cut(s)	248, 317, 327, 357, 823
Fsp4HI	GCNGC	6 cut(s)	143, 294, 342, 644, 868, 1010
GlaI	GCGC	5 cut(s)	150, 292, 514, 1008, 1013
GluI	GCNGC	6 cut(s)	143, 294, 342, 644, 868, 1010
GsaI	CCCAGC	1 cut(s)	883
GsuI	CTGGAG	1 cut(s)	724
HaeII	RGCGCY	2 cut(s)	152, 1015
HaeIII	GGCC	5 cut(s)	5, 361, 420, 551, 899
HgaI	GACGC	2 cut(s)	89, 347
HhaI	GCGC	5 cut(s)	151, 293, 515, 1009, 1014
Hin1I	GRCGYC	3 cut(s)	29, 81, 149
Hin1II	CATG	3 cut(s)	10, 379, 603
Hin6I	GCGC	5 cut(s)	149, 291, 513, 1007, 1012
HinP1I	GCGC	5 cut(s)	149, 291, 513, 1007, 1012
HincII	GTYRAC	2 cut(s)	652, 696
HindII	GTYRAC	2 cut(s)	652, 696
HindIII	AAGCTT	1 cut(s)	528
HinfI	GANTC	9 cut(s)	136, 154, 302, 308, 458, 485, 503, 665, 976
HphI	GGTGA	3 cut(s)	82, 400, 481
Hpy166II	GTNNAC	4 cut(s)	652, 696, 784, 786
Hpy188III	TCNNGA	5 cut(s)	191, 197, 607, 674, 703
Hpy8I	GTNNAC	4 cut(s)	652, 696, 784, 786
Hpy99I	CGWCG	7 cut(s)	28, 31, 34, 171, 341, 497, 680
HpyAV	CCTTC	1 cut(s)	822
HpyCH4III	ACNGT	1 cut(s)	167
HpyCH4IV	ACGT	3 cut(s)	29, 286, 492
HpyCH4V	TGCA	4 cut(s)	51, 522, 567, 591
HpyF3I	CTNAG	1 cut(s)	381
HpySE526I	ACGT	3 cut(s)	29, 286, 492
Hsp92I	GRCGYC	3 cut(s)	29, 81, 149
Hsp92II	CATG	3 cut(s)	10, 379, 603
HspAI	GCGC	5 cut(s)	149, 291, 513, 1007, 1012
KasI	GGCGCC	1 cut(s)	148
KroI	GCCGGC	2 cut(s)	145, 633
KroNI	GCCGGC	2 cut(s)	147, 635
KspI	CCGCGG	1 cut(s)	871
Kzo9I	GATC	2 cut(s)	193, 399
LmnI	GCTCC	8 cut(s)	223, 243, 251, 360, 763, 826, 981, 1017
Lsp1109I	GCAGC	3 cut(s)	328, 630, 1021
LweI	GCATC	4 cut(s)	38, 75, 600, 600
MaeII	ACGT	3 cut(s)	29, 286, 492
MaeIII	GTNAC	2 cut(s)	88, 671
MalI	GATC	2 cut(s)	195, 401
MboI	GATC	2 cut(s)	193, 399
MboII	GAAGA	6 cut(s)	61, 134, 356, 765, 870, 924
MhlI	GDGCHC	6 cut(s)	248, 317, 327, 357, 626, 823
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	5 cut(s)	536, 658, 770, 892, 925
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	149
MlyI	GAGTC	7 cut(s)	130, 148, 296, 317, 467, 512, 985
MmeI	TCCRAC	6 cut(s)	377, 480, 525, 927, 953, 959
Mox20I	TGGCCA	1 cut(s)	5
MreI	CGCCGGCG	1 cut(s)	145
MroNI	GCCGGC	2 cut(s)	145, 633
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	267, 474, 807
MslI	CAYNNNNRTG	1 cut(s)	791
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	870
MteI	GCGCNGCGC	1 cut(s)	1010
MvnI	CGCG	4 cut(s)	293, 515, 870, 1007
NaeI	GCCGGC	2 cut(s)	147, 635
NarI	GGCGCC	1 cut(s)	149
NcoI	CCATGG	1 cut(s)	599
NdeII	GATC	2 cut(s)	193, 399
NgoMIV	GCCGGC	2 cut(s)	145, 633
NlaIII	CATG	3 cut(s)	10, 379, 603
NmuCI	GTSAC	2 cut(s)	88, 671
NspV	TTCGAA	1 cut(s)	534
PaqCI	CACCTGC	1 cut(s)	101
PcsI	WCGNNNNNNNCGW	3 cut(s)	20, 489, 645
PdiI	GCCGGC	2 cut(s)	147, 635
PfeI	GAWTC	2 cut(s)	485, 665
PflFI	GACNNNGTC	2 cut(s)	28, 943
PkrI	GCNGC	6 cut(s)	144, 295, 343, 645, 869, 1011
PleI	GAGTC	7 cut(s)	130, 148, 296, 316, 466, 511, 984
PluTI	GGCGCC	1 cut(s)	152
PpsI	GAGTC	7 cut(s)	130, 148, 296, 316, 466, 511, 984
Ppu21I	YACGTR	1 cut(s)	287
Psp124BI	GAGCTC	3 cut(s)	248, 317, 327
PspFI	CCCAGC	1 cut(s)	879
PspPI	GGNCC	4 cut(s)	235, 550, 939, 957
PsyI	GACNNNGTC	2 cut(s)	28, 943
RsaI	GTAC	2 cut(s)	785, 1004
RsaNI	GTAC	2 cut(s)	784, 1003
RseI	CAYNNNNRTG	1 cut(s)	791
SacI	GAGCTC	3 cut(s)	248, 317, 327
SacII	CCGCGG	1 cut(s)	871
SaqAI	TTAA	3 cut(s)	267, 474, 807
SatI	GCNGC	6 cut(s)	143, 294, 342, 644, 868, 1010
Sau3AI	GATC	2 cut(s)	193, 399
Sau96I	GGNCC	4 cut(s)	235, 550, 939, 957
SchI	GAGTC	7 cut(s)	130, 148, 296, 317, 467, 512, 985
SduI	GDGCHC	6 cut(s)	248, 317, 327, 357, 626, 823
SfaNI	GCATC	4 cut(s)	38, 75, 600, 600
SfoI	GGCGCC	1 cut(s)	150
Sfr303I	CCGCGG	1 cut(s)	871
SfuI	TTCGAA	1 cut(s)	534
SgrAI	CRCCGGYG	1 cut(s)	145
SgrBI	CCGCGG	1 cut(s)	871
SinI	GGWCC	3 cut(s)	235, 939, 957
SmaI	CCCGGG	2 cut(s)	554, 760
SmiMI	CAYNNNNRTG	1 cut(s)	791
Sse9I	AATT	5 cut(s)	536, 658, 770, 892, 925
SspDI	GGCGCC	1 cut(s)	148
SstI	GAGCTC	3 cut(s)	248, 317, 327
StyI	CCWWGG	1 cut(s)	599
TaaI	ACNGT	1 cut(s)	167
TaiI	ACGT	3 cut(s)	32, 289, 495
TaqI	TCGA	8 cut(s)	120, 311, 321, 402, 534, 608, 845, 935
TaqII	GACCGA	2 cut(s)	669, 986
TasI	AATT	5 cut(s)	536, 658, 770, 892, 925
TatI	WGTACW	1 cut(s)	783
TauI	GCSGC	3 cut(s)	145, 296, 870
TfiI	GAWTC	2 cut(s)	485, 665
Tru1I	TTAA	3 cut(s)	267, 474, 807
Tru9I	TTAA	3 cut(s)	267, 474, 807
TscAI	CASTG	2 cut(s)	515, 793
TseFI	GTSAC	2 cut(s)	88, 671
TseI	GCWGC	3 cut(s)	341, 643, 1009
Tsp45I	GTSAC	2 cut(s)	88, 671
TspGWI	ACGGA	3 cut(s)	76, 825, 878
TspMI	CCCGGG	2 cut(s)	552, 758
TspRI	CASTG	2 cut(s)	515, 793
Tth111I	GACNNNGTC	2 cut(s)	28, 943
VpaK11BI	GGWCC	3 cut(s)	235, 939, 957
XapI	RAATTY	3 cut(s)	536, 658, 925
XcmI	CCANNNNNNNNNTGG	1 cut(s)	451
XmaI	CCCGGG	2 cut(s)	552, 758
ZraI	GACGTC	1 cut(s)	30

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.