MD05G1089900.v1.1

Cinnamyl alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
19018200 .. 19020786
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1089900.v1.1.491

Sequence Viewer

Length: 1293 bp
ATGTGGCTCTTGTATATATTAAGTTACTTATACCAAAGGGTGGGAGGCTCACCTACCACAAAGATGGTGATGTGTCAAGCTTCTGAGCTGGGCTTTGTTTCTCCTTTATTTATATGCTTCATTTGCGTTTCTGATTCCCCAAAGCCGAAACCCACTTTTCCAATACACTCACACTGTCTCTGTCCCTCCCCTCCCCGGAAAACACACTCAGAAGGAAAAATGGGCAGCCTTGAAGTGGAGAGAACGACTACAGGATGGGCAGCAAGAGACTCATCTGGAATTCTCTCACCCTACACCTACAATCTCAGGAACACAGGGCCAGAAGATGTTTACGTCAAGGTTCTCTGCTGTGGAGTTTGCCACTCGGATCTTCACCAGGTCAAAAATGATCTTGGCATGTCAAACTATCCCATGGTTCCCGGGCATGAGGTGGTTGGTGAGGTGGTGGAGGTGGGATCAGATGTGACCAAGTTCAGAGCAGGAGATGTGGTTGGAGTTGGCCTCCTTGTTGGATGCTGCAGAAACTGCAACCCGTGCAAAACGGACAACGAGCAGTACTGCAACAAGAAAATCTGGTCTTACAATGATACTTACACCGACGGCCAAACCACCCAAGGCGGCTTTGCTGGTGCCCTCGTCGCTGATCAAAAATTTGTGGTGAAGATACCGGAGGGCATGGTACCCGAACAGGCAGCGCCGCTGCTGTGCGCCGGGGTGACGGTGTACAGCCCGCTGAAGCACTTTGGCCTGAATGTGAGTGGGTTAAGAGGAGGAATATTGGGGCTTGGAGGTGTGGGACACATGGGGGTGAAGATAGCAAAGGCCATGGGGCACCATGTGACTGTGATAAGCTCATCAGATAGGAAAAGAGAGGAGGCTTTGGACCATATTGGGGCTGATGAGTTCTTGGTTAGCTCTGATGGCACCAAAATGCAAGAAGCTGCTGACTCATTCGACTACATCATTGACACAGTTCCTGTGGCCCACCCACTTGAGCCTTACCTCTCTTTGTTGAAGCTTGATGGGAAATTGATCTTGATGGGTGTAATTAACACCCCACTACAATTTGTCTCCCCAATGGTCATGCTTGGGAGAAAGACAATCACAGGGAGCTTCGTGGGGAGCATGAAGGAAACTGAGGAGATGCTTGAGTTTTGCAAAGAGAAGGGATTAACATCAATGATTGAAGTGGTTAAGATGGATTACATCAACACAGCCTTTGAGAGGTTGGAGAAAAACGATGTTAGGTACAGGTTCGTTGTGGATGTGGCCGGCAGCAACCTAATTGAATAA

Protein Analysis

431

Amino Acids

46.93

Weight (kDa)

5.97

Isoelectric Point (pI)

33.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 106 - 224 2.9e-26 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 264 - 387 2.1e-24 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 679
AccB1I GGYRCC 4 cut(s) 629, 679, 831, 923
AccB7I CCANNNNNTGG 1 cut(s) 40
AciI CCGC 3 cut(s) 618, 698, 731
AclWI GGATC 2 cut(s) 375, 463
AcoI YGGCCR 2 cut(s) 601, 1269
AcsI RAATTY 2 cut(s) 279, 650
AcuI CTGAAG 1 cut(s) 755
AdeI CACNNNGTG 1 cut(s) 838
AfaI GTAC 4 cut(s) 557, 681, 725, 1250
AfiI CCNNNNNNNGG 5 cut(s) 40, 195, 235, 892, 1224
AgsI TTSAA 4 cut(s) 233, 1015, 1187, 1289
AjnI CCWGG 1 cut(s) 375
AluBI AGCT 7 cut(s) 80, 88, 852, 915, 941, 1018, 1113
AluI AGCT 7 cut(s) 80, 88, 852, 915, 941, 1018, 1113
Alw26I GTCTC 3 cut(s) 182, 261, 1075
AlwI GGATC 2 cut(s) 375, 463
AlwNI CAGNNNCTG 2 cut(s) 525, 977
Ama87I CYCGRG 1 cut(s) 419
AoxI GGCC 7 cut(s) 317, 499, 601, 745, 822, 981, 1269
ApeKI GCWGC 7 cut(s) 225, 260, 516, 692, 700, 941, 1275
ApoI RAATTY 2 cut(s) 279, 650
Asp718I GGTACC 1 cut(s) 679
AspLEI GCGC 2 cut(s) 697, 710
AspS9I GGNCC 3 cut(s) 317, 883, 982
AsuC2I CCSGG 4 cut(s) 196, 420, 421, 712
AsuHPI GGTGA 8 cut(s) 42, 79, 279, 365, 449, 670, 727, 820
AvaI CYCGRG 1 cut(s) 419
AvaII GGWCC 1 cut(s) 883
BaeGI GKGCMC 2 cut(s) 634, 834
BanI GGYRCC 4 cut(s) 629, 679, 831, 923
BbvI GCAGC 7 cut(s) 237, 272, 503, 687, 704, 928, 1287
BccI CCATC 6 cut(s) 58, 249, 914, 1016, 1033, 1192
BceAI ACGGC 1 cut(s) 616
BciT130I CCWGG 1 cut(s) 377
BclI TGATCA 1 cut(s) 643
BcnI CCSGG 4 cut(s) 196, 420, 421, 712
BcoDI GTCTC 3 cut(s) 182, 261, 1075
BfmI CTRYAG 2 cut(s) 249, 517
BfoI RGCGCY 1 cut(s) 698
BisI GCNGC 9 cut(s) 226, 261, 517, 619, 693, 698, 701, 942, 1276
BlsI GCNGC 9 cut(s) 227, 262, 518, 620, 694, 699, 702, 943, 1277
BmcAI AGTACT 1 cut(s) 557
Bme1390I CCNGG 5 cut(s) 196, 377, 420, 421, 712
Bme18I GGWCC 1 cut(s) 883
BmeT110I CYCGRG 1 cut(s) 419
BmgT120I GGNCC 3 cut(s) 317, 883, 982
BmiI GGNNCC 5 cut(s) 417, 631, 681, 833, 925
BmrFI CCNGG 5 cut(s) 196, 377, 420, 421, 712
BmsI GCATC 2 cut(s) 503, 1134
BplI GAGNNNNNCTC 2 cut(s) 486, 518
BpuEI CTTGAG 2 cut(s) 1013, 1169
BpuMI CCSGG 4 cut(s) 196, 420, 421, 712
BsaBI GATNNNNATC 1 cut(s) 1174
BsaJI CCNNGG 6 cut(s) 194, 411, 419, 613, 711, 825
BsaWI WCCGGW 1 cut(s) 667
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 5 cut(s) 40, 195, 235, 892, 1224
Bse118I RCCGGY 1 cut(s) 1271
Bse8I GATNNNNATC 1 cut(s) 1174
BseBI CCWGG 1 cut(s) 377
BseDI CCNNGG 6 cut(s) 194, 411, 419, 613, 711, 825
BseGI GGATG 3 cut(s) 260, 518, 1270
BseJI GATNNNNATC 1 cut(s) 1174
BseLI CCNNNNNNNGG 5 cut(s) 40, 195, 235, 892, 1224
BseMII CTCAG 4 cut(s) 75, 222, 319, 1128
BseRI GAGGAG 3 cut(s) 783, 887, 1154
BseSI GKGCMC 2 cut(s) 634, 834
BseXI GCAGC 7 cut(s) 237, 272, 503, 687, 704, 928, 1287
BseYI CCCAGC 1 cut(s) 88
BshFI GGCC 7 cut(s) 319, 501, 603, 747, 824, 983, 1271
BshNI GGYRCC 4 cut(s) 629, 679, 831, 923
BsiHKCI CYCGRG 1 cut(s) 419
BsiSI CCGG 5 cut(s) 196, 420, 668, 711, 1272
BslFI GGGAC 2 cut(s) 168, 810
BslI CCNNNNNNNGG 5 cut(s) 40, 195, 235, 892, 1224
BsmAI GTCTC 3 cut(s) 182, 261, 1075
BsmFI GGGAC 2 cut(s) 168, 810
BsnI GGCC 7 cut(s) 319, 501, 603, 747, 824, 983, 1271
BsoBI CYCGRG 1 cut(s) 419
Bsp1286I GDGCHC 2 cut(s) 634, 834
Bsp1407I TGTACA 1 cut(s) 723
Bsp143I GATC 5 cut(s) 367, 388, 455, 643, 1032
Bsp19I CCATGG 2 cut(s) 411, 825
BspACI CCGC 3 cut(s) 618, 698, 731
BspANI GGCC 7 cut(s) 319, 501, 603, 747, 824, 983, 1271
BspCNI CTCAG 4 cut(s) 76, 221, 318, 1129
BspLI GGNNCC 5 cut(s) 417, 631, 681, 833, 925
BspMAI CTGCAG 1 cut(s) 521
BspPI GGATC 2 cut(s) 375, 463
BspT107I GGYRCC 4 cut(s) 629, 679, 831, 923
BsrFI RCCGGY 1 cut(s) 1271
BsrGI TGTACA 1 cut(s) 723
BssAI RCCGGY 1 cut(s) 1271
BssECI CCNNGG 6 cut(s) 194, 411, 419, 613, 711, 825
BssMI GATC 5 cut(s) 367, 388, 455, 643, 1032
BssT1I CCWWGG 3 cut(s) 411, 613, 825
Bst2UI CCWGG 1 cut(s) 377
Bst4CI ACNGT 4 cut(s) 176, 721, 844, 973
BstAPI GCANNNNNTGC 2 cut(s) 525, 534
BstAUI TGTACA 1 cut(s) 723
BstC8I GCNNGC 2 cut(s) 731, 1273
BstDEI CTNAG 4 cut(s) 84, 208, 305, 1137
BstDSI CCRYGG 2 cut(s) 411, 825
BstENI CCTNNNNNAGG 1 cut(s) 1222
BstF5I GGATG 3 cut(s) 260, 518, 1270
BstH2I RGCGCY 1 cut(s) 698
BstHHI GCGC 2 cut(s) 697, 710
BstKTI GATC 5 cut(s) 370, 391, 458, 646, 1035
BstMAI GTCTC 3 cut(s) 182, 261, 1075
BstMBI GATC 5 cut(s) 367, 388, 455, 643, 1032
BstMWI GCNNNNNNNGC 5 cut(s) 123, 525, 534, 638, 921
BstNI CCWGG 1 cut(s) 377
BstNSI RCATGY 1 cut(s) 400
BstSCI CCNGG 5 cut(s) 194, 375, 418, 419, 710
BstSFI CTRYAG 2 cut(s) 249, 517
BstSLI GKGCMC 2 cut(s) 634, 834
BstV1I GCAGC 7 cut(s) 237, 272, 503, 687, 704, 928, 1287
BstX2I RGATCY 1 cut(s) 367
BstXI CCANNNNNNTGG 1 cut(s) 64
BstYI RGATCY 1 cut(s) 367
BsuRI GGCC 7 cut(s) 319, 501, 603, 747, 824, 983, 1271
BtgI CCRYGG 2 cut(s) 411, 825
BtsCI GGATG 3 cut(s) 260, 518, 1270
BtsIMutI CAGTG 1 cut(s) 172
Cac8I GCNNGC 2 cut(s) 731, 1273
CaiI CAGNNNCTG 2 cut(s) 525, 977
CfoI GCGC 2 cut(s) 697, 710
Cfr10I RCCGGY 1 cut(s) 1271
Cfr13I GGNCC 3 cut(s) 317, 883, 982
Cfr9I CCCGGG 1 cut(s) 419
CsiI ACCWGGT 1 cut(s) 375
Csp6I GTAC 4 cut(s) 556, 680, 724, 1249
CviAII CATG 9 cut(s) 397, 412, 425, 676, 802, 826, 836, 1084, 1126
CviQI GTAC 4 cut(s) 556, 680, 724, 1249
DdeI CTNAG 4 cut(s) 84, 208, 305, 1137
DpnI GATC 5 cut(s) 369, 390, 457, 645, 1034
DpnII GATC 5 cut(s) 367, 388, 455, 643, 1032
DraIII CACNNNGTG 1 cut(s) 838
EaeI YGGCCR 2 cut(s) 601, 1269
Eco130I CCWWGG 3 cut(s) 411, 613, 825
Eco47I GGWCC 1 cut(s) 883
Eco57I CTGAAG 1 cut(s) 755
Eco88I CYCGRG 1 cut(s) 419
EcoNI CCTNNNNNAGG 1 cut(s) 1222
EcoRI GAATTC 1 cut(s) 279
EcoRII CCWGG 1 cut(s) 375
EcoT14I CCWWGG 3 cut(s) 411, 613, 825
ErhI CCWWGG 3 cut(s) 411, 613, 825
FaeI CATG 9 cut(s) 400, 415, 428, 679, 805, 829, 839, 1087, 1129
FaqI GGGAC 2 cut(s) 168, 810
FatI CATG 9 cut(s) 396, 411, 424, 675, 801, 825, 835, 1083, 1125
FauI CCCGC 1 cut(s) 738
FbaI TGATCA 1 cut(s) 643
Fnu4HI GCNGC 9 cut(s) 226, 261, 517, 619, 693, 698, 701, 942, 1276
FokI GGATG 3 cut(s) 267, 525, 1277
Fsp4HI GCNGC 9 cut(s) 226, 261, 517, 619, 693, 698, 701, 942, 1276
GlaI GCGC 2 cut(s) 696, 709
GluI GCNGC 9 cut(s) 226, 261, 517, 619, 693, 698, 701, 942, 1276
GsaI CCCAGC 1 cut(s) 92
HaeII RGCGCY 1 cut(s) 698
HaeIII GGCC 7 cut(s) 319, 501, 603, 747, 824, 983, 1271
HapII CCGG 5 cut(s) 196, 420, 668, 711, 1272
HhaI GCGC 2 cut(s) 697, 710
Hin1II CATG 9 cut(s) 400, 415, 428, 679, 805, 829, 839, 1087, 1129
Hin6I GCGC 2 cut(s) 695, 708
HinP1I GCGC 2 cut(s) 695, 708
HindIII AAGCTT 2 cut(s) 78, 1016
HinfI GANTC 3 cut(s) 134, 269, 947
HpaII CCGG 5 cut(s) 196, 420, 668, 711, 1272
HphI GGTGA 8 cut(s) 42, 79, 279, 365, 449, 670, 727, 820
Hpy166II GTNNAC 2 cut(s) 331, 724
Hpy188I TCNGA 8 cut(s) 85, 133, 211, 367, 460, 476, 859, 919
Hpy188III TCNNGA 3 cut(s) 276, 307, 1036
Hpy8I GTNNAC 2 cut(s) 331, 724
Hpy99I CGWCG 2 cut(s) 602, 641
HpyAV CCTTC 3 cut(s) 206, 1123, 1159
HpyCH4III ACNGT 4 cut(s) 176, 721, 844, 973
HpyCH4IV ACGT 1 cut(s) 333
HpyCH4V TGCA 6 cut(s) 519, 528, 537, 561, 934, 1158
HpyF10VI GCNNNNNNNGC 5 cut(s) 123, 525, 534, 638, 921
HpyF3I CTNAG 4 cut(s) 84, 208, 305, 1137
HpySE526I ACGT 1 cut(s) 333
Hsp92II CATG 9 cut(s) 400, 415, 428, 679, 805, 829, 839, 1087, 1129
HspAI GCGC 2 cut(s) 695, 708
KpnI GGTACC 1 cut(s) 683
KroI GCCGGC 1 cut(s) 1271
KroNI GCCGGC 1 cut(s) 1273
Ksp22I TGATCA 1 cut(s) 643
Kzo9I GATC 5 cut(s) 367, 388, 455, 643, 1032
LmnI GCTCC 2 cut(s) 1110, 1122
Lsp1109I GCAGC 7 cut(s) 237, 272, 503, 687, 704, 928, 1287
LweI GCATC 2 cut(s) 503, 1134
MabI ACCWGGT 1 cut(s) 375
MaeII ACGT 1 cut(s) 333
MaeIII GTNAC 4 cut(s) 23, 463, 715, 838
MalI GATC 5 cut(s) 369, 390, 457, 645, 1034
MboI GATC 5 cut(s) 367, 388, 455, 643, 1032
MboII GAAGA 4 cut(s) 335, 362, 673, 823
MflI RGATCY 1 cut(s) 367
MhlI GDGCHC 2 cut(s) 634, 834
MluCI AATT 6 cut(s) 279, 650, 1028, 1047, 1064, 1284
MlyI GAGTC 2 cut(s) 263, 941
MmeI TCCRAC 3 cut(s) 472, 490, 1209
MroNI GCCGGC 1 cut(s) 1271
MseI TTAA 5 cut(s) 20, 764, 1050, 1172, 1194
MslI CAYNNNNRTG 3 cut(s) 62, 806, 929
MspA1I CMGCKG 2 cut(s) 700, 733
MspI CCGG 5 cut(s) 196, 420, 668, 711, 1272
MspR9I CCNGG 5 cut(s) 196, 377, 420, 421, 712
MvaI CCWGG 1 cut(s) 377
MwoI GCNNNNNNNGC 5 cut(s) 123, 525, 534, 638, 921
NaeI GCCGGC 1 cut(s) 1273
NciI CCSGG 4 cut(s) 196, 420, 421, 712
NcoI CCATGG 2 cut(s) 411, 825
NdeII GATC 5 cut(s) 367, 388, 455, 643, 1032
NgoMIV GCCGGC 1 cut(s) 1271
NlaIII CATG 9 cut(s) 400, 415, 428, 679, 805, 829, 839, 1087, 1129
NlaIV GGNNCC 5 cut(s) 417, 631, 681, 833, 925
NmuCI GTSAC 3 cut(s) 463, 715, 838
NspI RCATGY 1 cut(s) 400
PdiI GCCGGC 1 cut(s) 1273
PfeI GAWTC 1 cut(s) 134
PflMI CCANNNNNTGG 1 cut(s) 40
PkrI GCNGC 9 cut(s) 227, 262, 518, 620, 694, 699, 702, 943, 1277
PleI GAGTC 2 cut(s) 263, 941
PpsI GAGTC 2 cut(s) 263, 941
Psp6I CCWGG 1 cut(s) 375
PspFI CCCAGC 1 cut(s) 88
PspGI CCWGG 1 cut(s) 375
PspN4I GGNNCC 5 cut(s) 417, 631, 681, 833, 925
PspPI GGNCC 3 cut(s) 317, 883, 982
PstI CTGCAG 1 cut(s) 521
PstNI CAGNNNCTG 2 cut(s) 525, 977
PsuI RGATCY 1 cut(s) 367
RsaI GTAC 4 cut(s) 557, 681, 725, 1250
RsaNI GTAC 4 cut(s) 556, 680, 724, 1249
RseI CAYNNNNRTG 3 cut(s) 62, 806, 929
SaqAI TTAA 5 cut(s) 20, 764, 1050, 1172, 1194
SatI GCNGC 9 cut(s) 226, 261, 517, 619, 693, 698, 701, 942, 1276
Sau3AI GATC 5 cut(s) 367, 388, 455, 643, 1032
Sau96I GGNCC 3 cut(s) 317, 883, 982
ScaI AGTACT 1 cut(s) 557
SchI GAGTC 2 cut(s) 263, 941
ScrFI CCNGG 5 cut(s) 196, 377, 420, 421, 712
SduI GDGCHC 2 cut(s) 634, 834
SexAI ACCWGGT 1 cut(s) 375
SfaNI GCATC 2 cut(s) 503, 1134
SfcI CTRYAG 2 cut(s) 249, 517
SinI GGWCC 1 cut(s) 883
SmaI CCCGGG 1 cut(s) 421
SmiMI CAYNNNNRTG 3 cut(s) 62, 806, 929
SmlI CTYRAG 2 cut(s) 992, 1148
SmoI CTYRAG 2 cut(s) 992, 1148
Sse9I AATT 6 cut(s) 279, 650, 1028, 1047, 1064, 1284
SsiI CCGC 3 cut(s) 618, 698, 731
SspI AATATT 1 cut(s) 777
StyD4I CCNGG 5 cut(s) 194, 375, 418, 419, 710
StyI CCWWGG 3 cut(s) 411, 613, 825
TaaI ACNGT 4 cut(s) 176, 721, 844, 973
TaiI ACGT 1 cut(s) 336
TaqI TCGA 1 cut(s) 954
TasI AATT 6 cut(s) 279, 650, 1028, 1047, 1064, 1284
TatI WGTACW 2 cut(s) 555, 723
TauI GCSGC 2 cut(s) 621, 700
TfiI GAWTC 1 cut(s) 134
Tru1I TTAA 5 cut(s) 20, 764, 1050, 1172, 1194
Tru9I TTAA 5 cut(s) 20, 764, 1050, 1172, 1194
TscAI CASTG 1 cut(s) 179
TseFI GTSAC 3 cut(s) 463, 715, 838
TseI GCWGC 7 cut(s) 225, 260, 516, 692, 700, 941, 1275
Tsp45I GTSAC 3 cut(s) 463, 715, 838
TspDTI ATGAA 2 cut(s) 109, 1142
TspGWI ACGGA 1 cut(s) 557
TspMI CCCGGG 1 cut(s) 419
TspRI CASTG 1 cut(s) 179
Van91I CCANNNNNTGG 1 cut(s) 40
VpaK11BI GGWCC 1 cut(s) 883
XagI CCTNNNNNAGG 1 cut(s) 1222
XapI RAATTY 2 cut(s) 279, 650
XceI RCATGY 1 cut(s) 400
XmaI CCCGGG 1 cut(s) 419
ZrmI AGTACT 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.