Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001379

Physical Location & Seq

Genomic Coordinates Reverse (-)

74548711 .. 74604924

Gene Structure 56214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0557000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGGAGAGGAAAGACATTTACCACTATTTGAGACAACGAAGGCAAAGGGAAAAGTCCTCTATAGGTTTTCTGCGGTGTCTGTATCTGTTGGTATATGTTTGATTTGGGTTTATAGAGTGATTCATATACCAAAAGCTGGAGAAGATGGAAGATTTGGTTGGATGCTATTGTTCGCCGCTGAGTTATGGTTCGCTTTTTACTGGTTCGTCACTCAAGCCCTTCGGTGGAGCCGCATCAACCGGCAAACCTTCAGGGACAGGCTCTCTGAAAGATATGAGAATGAGTTGCCGGGGGTGGACATATTCGTGTGCACAGCGGATCCGATCATAGAGCCGCCGATTATGGTGATGAACACTGTTCTATCGGTCATGGCTTATGACTATCCGCCGGAGAAGCTCAGCGTGTATCTCTCCGACGATGGCGGCTCAGAATTTACGTACTATGCTTTTTTAGAAGCTGCTGAGTTTGCCAAGCGCTGGATACCCTATTGCAAGAAGTACAATGTGGAGCCAAGATCACCCGCTGCTTATTTTGTCTCAACAGCTTCTGATGATCAAAGTCAGAATCAGAAACAAGAAGGAGATTTAGCTGTAATTAAGAAATTATATGAGGACATGGCGACCAAAATTGGAAATGCAGTGAAGCTAGGCCGCATTTCAGAAGAAGTGAGATCAAAACATAAAGGCTTTTCTCGATGGGACTCATATTCATCAAAACGTGACCATGAAACCATTCTTCAAATAGTAATTGATGGGAGAGACCCAAATGCAAGAGATGTTGAAGGGTGTGTGTTGCCAACTTTGGTGTATTTGGCTCGGGAGAAGAGACCCCAGATTCACCATAACTTCAAAGCTGGTGCTATGAATGCTCTGATTAGGGTATCGTCAAATATAAGCAATGGGAAGTTGCTTCTTAATGTAGACTGTGACATGTATTCAAACAACTCGAAGGCCATAAGGGATGCACTCTGCTTCTTAATGGATGAAGAACAAGGCCATGAGATTGCATACGTACAGTTCCCGCAGAATTTCGATAACCTTACTAAGAATGAATTATACGCTTCATTACGAGTATATTTCGAGTTATTGTTTTGGTATATACTGAAGGTGGAATTCCATGGTCTGGATAATTATTGGGGGACATTATATGTTGGAAGTGGATGCTTTCACAGAAGAGAAACTCTTTGTGGGAAGAAATTCAGCAAGGTAAATAAGAGTGAGATGATATGGGAGGACAAAAAAGGTGAAGAAATTGGCATTCATGAATTAGAAGAAAGTTCAAAAAGTCTTGCGAGTTGTACATATGAAGAGAACACACAGTGGGGAAAAGAGATGGGTTTGAAATATGGGTGTCCGGTTGAAGATGTGATAACGGGGTTATCGATCCAATGCCGAGGATGGAAATCAGTGTATTGCAATCCAACAAGGAAAGCTTTCTTAGGATTAGCTCCAACCACATTGCTTCAGGCACTTCTGCAGCATAAGAGATGGTCGGAAGGCAACCTTCAGATTACGCTGTCTAAGTACAGTGTTGTATGGTATGGCCGTGGAAAGATTGGTTTAGGCCATCAACTTGGATACCTTCGCTACAACTTATGGGCTGCTAATTGCTGGGCAACACTAATTTACTCAACTCTTCCTTCACTTTACCTCCTTAGAGGCACGTCCTTATTTCCTCAGATTTCAAGTCGATGGATTATACCATTTGCATATGTTATAATTGCTAAGAACATTGGAAGCTTTGTGGAGTATCTATGGTGTGGAGGCACGAGCTTAGGTTGGTGGAATGACCAACGTATCTGGCTTTACCAGAGAACAACCTCATACTTATTTGCCTTCATCGACACCATTGTACACTACCTCGGATACACAGATTCAGCATTTGTAATAACAGCCAAGGTGGCCGATGAAGACGTGTCCGAACGATATGAGAAAGAGATCATGGAATTTGGGGGCTCGTCTCCGATGTTTACCGTGCTGGCAACACTTGCATTACTCAATCTGTACTGCTTTGCCTGGTTTGTGAAGGCAGCAATCACCGGAACAAAGGTTATTGCAGAGGTTTATGAGACAATGTTCTTACAGATTCTTCTATGTGTGGTTTTGATTTTAATTAACCTACCGTTGTACGAAGCCCTATACGTAAGGAAGGACAAGGGGAAGCTGCCGAGCTCTGTAGCATTTAAGTCGATGGCATTTGCTGGATTTGCTTGCATATGTTTTAAATTTCTATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016614 GO:0016616 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0045551 GO:0050896 GO:0055114 GO:0071704 GO:0080167 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

745

Amino Acids

85.54

Weight (kDa)

7.95

Isoelectric Point (pI)

40.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	99 - 406	1.3e-89	Cellulose synthase
Cellulose_synt	PF03552	429 - 732	3.4e-42	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001379)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19450 AT4G34230 AT4G34230
fragaria_vesca	FvH4_1g16790 FvH4_1g16790 FvH4_2g05132 FvH4_2g05132 FvH4_2g05132 FvH4_2g05133 FvH4_2g05134
malus_domestica	MD05G1089800.v1.1 MD05G1089900.v1.1 MD10G1097100.v1.1 MD10G1097200.v1.1 MD10G1097500.v1.1
prunus_persica	Prupe.6G228800_v2.0.a1 Prupe.8G135100_v2.0.a1 Prupe.8G135100_v2.0.a1 Prupe.8G135300_v2.0.a1 Prupe.8G135300_v2.0.a1
pyrus_communis	pycom05g08890 pycom10g08310 pycom10g08320
rosa_chinensis	RchiOBHm_Chr2g0106691 RchiOBHm_Chr6g0255061 RchiOBHm_Chr6g0255071
rosa_laevigata	RLG00000014854 RLG00000014856 RLG00000017531
rosa_multiflora	Rmu_co8122326.1_g000001 Rmu_co8379393.1_g000001 Rmu_sc0003745.1_g000001 Rmu_sc0004000.1_g000006 Rmu_sc0004590.1_g000001 Rmu_ssc0000011.1_g000071
rosa_roxburghii	Rroxscaffold_2G00136880 Rroxscaffold_7G00210210 Rroxscaffold_7G00210220
rosa_rugosa	Rorug02G0137800 Rorug05G0556500 Rorug05G0556900 Rorug05G0557000
rosa_samantha	Rh2BG200000 Rh2CG193900 Rh2DG195100 Rh6AG073900 Rh6BG066400 Rh6BG066500 Rh6DG063100 Rh6DG063200
rosa_wichuraiana	Rw2G014850 Rw6G006420 Rw6G006470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1718
AccB7I	CCANNNNNTGG	3 cut(s)	137, 477, 1123
AccI	GTMKAC	1 cut(s)	921
AclWI	GGATC	3 cut(s)	314, 327, 1378
AcoI	YGGCCR	2 cut(s)	1543, 1902
AcsI	RAATTY	6 cut(s)	431, 1027, 1112, 1196, 1946, 2225
AcuI	CTGAAG	4 cut(s)	235, 1124, 1448, 1490
AdeI	CACNNNGTG	1 cut(s)	1320
AfaI	GTAC	8 cut(s)	440, 500, 1014, 1300, 1526, 1854, 2006, 2129
AfeI	AGCGCT	1 cut(s)	476
AfiI	CCNNNNNNNGG	4 cut(s)	137, 225, 477, 1123
AflIII	ACRYGT	2 cut(s)	930, 1914
AgsI	TTSAA	8 cut(s)	740, 782, 850, 939, 1281, 1342, 1361, 1686
AjiI	CACGTC	2 cut(s)	1665, 1915
AjnI	CCWGG	1 cut(s)	2015
AjuI	GAANNNNNNNTTGG	2 cut(s)	142, 174
Alw21I	GWGCWC	2 cut(s)	314, 2174
Alw26I	GTCTC	6 cut(s)	26, 541, 753, 820, 1965, 2063
Alw44I	GTGCAC	1 cut(s)	310
AlwI	GGATC	3 cut(s)	314, 327, 1378
AlwNI	CAGNNNCTG	1 cut(s)	548
Ama87I	CYCGRG	1 cut(s)	816
Aor51HI	AGCGCT	1 cut(s)	476
AoxI	GGCC	6 cut(s)	649, 951, 994, 1543, 1564, 1902
ApaLI	GTGCAC	1 cut(s)	310
ApeKI	GCWGC	6 cut(s)	458, 524, 1477, 1601, 2030, 2164
ApoI	RAATTY	6 cut(s)	431, 1027, 1112, 1196, 1946, 2225
Asp700I	GAANNNNTTC	3 cut(s)	732, 1196, 1433
AspLEI	GCGC	1 cut(s)	477
AsuC2I	CCSGG	1 cut(s)	291
AsuHPI	GGTGA	5 cut(s)	358, 510, 830, 1256, 2029
AvaI	CYCGRG	1 cut(s)	816
BaeGI	GKGCMC	1 cut(s)	314
BaeI	ACNNNNGTAYC	2 cut(s)	1780, 1813
BamHI	GGATCC	1 cut(s)	319
BanII	GRGCYC	2 cut(s)	1958, 2174
BauI	CACGAG	1 cut(s)	1768
BbsI	GAAGAC	1 cut(s)	1917
Bbv12I	GWGCWC	2 cut(s)	314, 2174
BbvI	GCAGC	6 cut(s)	445, 511, 1489, 1588, 2042, 2151
BceAI	ACGGC	1 cut(s)	1530
BcgI	CGANNNNNNTGC	2 cut(s)	2169, 2203
BciT130I	CCWGG	1 cut(s)	2017
BciVI	GTATCC	3 cut(s)	474, 1571, 1859
BclI	TGATCA	1 cut(s)	553
BcnI	CCSGG	1 cut(s)	291
BcoDI	GTCTC	6 cut(s)	26, 541, 753, 820, 1965, 2063
BfaI	CTAG	1 cut(s)	647
BfmI	CTRYAG	3 cut(s)	61, 1475, 2175
BfoI	RGCGCY	1 cut(s)	478
BfuI	GTATCC	3 cut(s)	474, 1571, 1859
BglI	GCCNNNNNGGC	1 cut(s)	1901
BlpI	GCTNAGC	1 cut(s)	398
Bme1390I	CCNGG	2 cut(s)	291, 2017
BmeT110I	CYCGRG	1 cut(s)	816
BmgBI	CACGTC	2 cut(s)	1665, 1915
BmiI	GGNNCC	3 cut(s)	230, 321, 510
BmrFI	CCNGG	2 cut(s)	291, 2017
BmsI	GCATC	4 cut(s)	153, 243, 952, 1151
BpiI	GAAGAC	1 cut(s)	1917
BpmI	CTGGAG	1 cut(s)	159
Bpu10I	CCTNAGC	1 cut(s)	1774
Bpu1102I	GCTNAGC	1 cut(s)	398
BpuEI	CTTGAG	1 cut(s)	198
BpuMI	CCSGG	1 cut(s)	291
Bsa29I	ATCGAT	1 cut(s)	1382
BsaAI	YACGTR	3 cut(s)	438, 1012, 2143
BsaBI	GATNNNNATC	1 cut(s)	1402
BsaI	GGTCTC	2 cut(s)	753, 820
BsaJI	CCNNGG	6 cut(s)	290, 1117, 1393, 1546, 1861, 1896
BsaWI	WCCGGW	2 cut(s)	1354, 2039
BsaXI	ACNNNNNCTCC	2 cut(s)	1635, 1665
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 225, 477, 1123
Bse118I	RCCGGY	1 cut(s)	240
Bse1I	ACTGG	1 cut(s)	206
Bse3DI	GCAATG	2 cut(s)	904, 1457
Bse8I	GATNNNNATC	1 cut(s)	1402
BseBI	CCWGG	1 cut(s)	2017
BseCI	ATCGAT	1 cut(s)	1382
BseDI	CCNNGG	6 cut(s)	290, 1117, 1393, 1546, 1861, 1896
BseGI	GGATG	5 cut(s)	168, 967, 988, 1166, 1403
BseJI	GATNNNNATC	1 cut(s)	1402
BseLI	CCNNNNNNNGG	4 cut(s)	137, 225, 477, 1123
BseMI	GCAATG	2 cut(s)	904, 1457
BseMII	CTCAG	5 cut(s)	171, 412, 441, 453, 1691
BseNI	ACTGG	1 cut(s)	206
BseSI	GKGCMC	1 cut(s)	314
BseXI	GCAGC	6 cut(s)	445, 511, 1489, 1588, 2042, 2151
BseYI	CCCAGC	1 cut(s)	1611
BshFI	GGCC	6 cut(s)	651, 953, 996, 1545, 1566, 1904
BshVI	ATCGAT	1 cut(s)	1382
BsiHKAI	GWGCWC	2 cut(s)	314, 2174
BsiHKCI	CYCGRG	1 cut(s)	816
BsiSI	CCGG	5 cut(s)	241, 290, 389, 1355, 2040
BslFI	GGGAC	3 cut(s)	269, 713, 1153
BslI	CCNNNNNNNGG	4 cut(s)	137, 225, 477, 1123
BsmAI	GTCTC	6 cut(s)	26, 541, 753, 820, 1965, 2063
BsmBI	CGTCTC	1 cut(s)	1965
BsmFI	GGGAC	3 cut(s)	269, 713, 1153
BsmI	GAATGC	2 cut(s)	871, 1257
BsnI	GGCC	6 cut(s)	651, 953, 996, 1545, 1566, 1904
Bso31I	GGTCTC	2 cut(s)	753, 820
BsoBI	CYCGRG	1 cut(s)	816
Bsp1286I	GDGCHC	3 cut(s)	314, 1958, 2174
Bsp1407I	TGTACA	2 cut(s)	1298, 1852
Bsp143I	GATC	7 cut(s)	319, 324, 515, 553, 671, 1383, 1938
Bsp1720I	GCTNAGC	1 cut(s)	398
Bsp19I	CCATGG	1 cut(s)	1117
BspANI	GGCC	6 cut(s)	651, 953, 996, 1545, 1566, 1904
BspCNI	CTCAG	5 cut(s)	172, 411, 440, 454, 1690
BspDI	ATCGAT	1 cut(s)	1382
BspHI	TCATGA	1 cut(s)	1261
BspLI	GGNNCC	3 cut(s)	230, 321, 510
BspMAI	CTGCAG	1 cut(s)	1479
BspPI	GGATC	3 cut(s)	314, 327, 1378
BspTNI	GGTCTC	2 cut(s)	753, 820
BsrDI	GCAATG	2 cut(s)	904, 1457
BsrFI	RCCGGY	1 cut(s)	240
BsrGI	TGTACA	2 cut(s)	1298, 1852
BsrI	ACTGG	1 cut(s)	206
BssAI	RCCGGY	1 cut(s)	240
BssECI	CCNNGG	6 cut(s)	290, 1117, 1393, 1546, 1861, 1896
BssMI	GATC	7 cut(s)	319, 324, 515, 553, 671, 1383, 1938
BssSI	CACGAG	1 cut(s)	1768
BssT1I	CCWWGG	2 cut(s)	1117, 1896
Bst2BI	CACGAG	1 cut(s)	1768
Bst2UI	CCWGG	1 cut(s)	2017
Bst4CI	ACNGT	7 cut(s)	358, 926, 1017, 1320, 1529, 1975, 2124
Bst6I	CTCTTC	4 cut(s)	818, 1168, 1302, 1641
BstAPI	GCANNNNNTGC	1 cut(s)	1988
BstAUI	TGTACA	2 cut(s)	1298, 1852
BstBAI	YACGTR	3 cut(s)	438, 1012, 2143
BstC8I	GCNNGC	2 cut(s)	1980, 2212
BstDSI	CCRYGG	2 cut(s)	1117, 1546
BstF5I	GGATG	5 cut(s)	168, 967, 988, 1166, 1403
BstH2I	RGCGCY	1 cut(s)	478
BstHHI	GCGC	1 cut(s)	477
BstKTI	GATC	7 cut(s)	322, 327, 518, 556, 674, 1386, 1941
BstMAI	GTCTC	6 cut(s)	26, 541, 753, 820, 1965, 2063
BstMBI	GATC	7 cut(s)	319, 324, 515, 553, 671, 1383, 1938
BstMWI	GCNNNNNNNGC	6 cut(s)	394, 467, 866, 1901, 1988, 2207
BstNI	CCWGG	1 cut(s)	2017
BstNSI	RCATGY	1 cut(s)	934
BstSCI	CCNGG	2 cut(s)	289, 2015
BstSFI	CTRYAG	3 cut(s)	61, 1475, 2175
BstSLI	GKGCMC	1 cut(s)	314
BstSNI	TACGTA	3 cut(s)	438, 1012, 2143
BstV1I	GCAGC	6 cut(s)	445, 511, 1489, 1588, 2042, 2151
BstV2I	GAAGAC	1 cut(s)	1917
BstX2I	RGATCY	1 cut(s)	319
BstXI	CCANNNNNNTGG	1 cut(s)	1574
BstYI	RGATCY	1 cut(s)	319
Bsu15I	ATCGAT	1 cut(s)	1382
BsuI	GTATCC	3 cut(s)	474, 1571, 1859
BsuRI	GGCC	6 cut(s)	651, 953, 996, 1545, 1566, 1904
BsuTUI	ATCGAT	1 cut(s)	1382
BtgI	CCRYGG	2 cut(s)	1117, 1546
BtrI	CACGTC	2 cut(s)	1665, 1915
BtsCI	GGATG	5 cut(s)	168, 967, 988, 1166, 1403
BtsI	GCAGTG	1 cut(s)	645
BtsIMutI	CAGTG	5 cut(s)	354, 645, 1325, 1413, 1534
Cac8I	GCNNGC	2 cut(s)	1980, 2212
CaiI	CAGNNNCTG	1 cut(s)	548
CciI	TCATGA	1 cut(s)	1261
CfoI	GCGC	1 cut(s)	477
Cfr10I	RCCGGY	1 cut(s)	240
ClaI	ATCGAT	1 cut(s)	1382
Csp6I	GTAC	8 cut(s)	439, 499, 1013, 1299, 1525, 1853, 2005, 2128
CviAII	CATG	8 cut(s)	370, 616, 725, 931, 998, 1118, 1262, 1942
CviQI	GTAC	8 cut(s)	439, 499, 1013, 1299, 1525, 1853, 2005, 2128
DpnI	GATC	7 cut(s)	321, 326, 517, 555, 673, 1385, 1940
DpnII	GATC	7 cut(s)	319, 324, 515, 553, 671, 1383, 1938
DraI	TTTAAA	1 cut(s)	2224
DraIII	CACNNNGTG	1 cut(s)	1320
EaeI	YGGCCR	2 cut(s)	1543, 1902
Eam1104I	CTCTTC	4 cut(s)	818, 1168, 1302, 1641
EarI	CTCTTC	4 cut(s)	818, 1168, 1302, 1641
EciI	GGCGGA	1 cut(s)	375
Ecl136II	GAGCTC	1 cut(s)	2172
Eco105I	TACGTA	3 cut(s)	438, 1012, 2143
Eco130I	CCWWGG	2 cut(s)	1117, 1896
Eco24I	GRGCYC	2 cut(s)	1958, 2174
Eco31I	GGTCTC	2 cut(s)	753, 820
Eco47III	AGCGCT	1 cut(s)	476
Eco53kI	GAGCTC	1 cut(s)	2172
Eco57I	CTGAAG	4 cut(s)	235, 1124, 1448, 1490
Eco88I	CYCGRG	1 cut(s)	816
EcoICRI	GAGCTC	1 cut(s)	2172
EcoRI	GAATTC	1 cut(s)	1112
EcoRII	CCWGG	1 cut(s)	2015
EcoT14I	CCWWGG	2 cut(s)	1117, 1896
EcoT38I	GRGCYC	2 cut(s)	1958, 2174
ErhI	CCWWGG	2 cut(s)	1117, 1896
Esp3I	CGTCTC	1 cut(s)	1965
FaeI	CATG	8 cut(s)	373, 619, 728, 934, 1001, 1121, 1265, 1945
FalI	AAGNNNNNCTT	4 cut(s)	1417, 1449, 1488, 1520
FaqI	GGGAC	3 cut(s)	269, 713, 1153
FatI	CATG	8 cut(s)	369, 615, 724, 930, 997, 1117, 1261, 1941
FauI	CCCGC	2 cut(s)	529, 1029
FauNDI	CATATG	3 cut(s)	1303, 1711, 2216
FbaI	TGATCA	1 cut(s)	553
FblI	GTMKAC	1 cut(s)	921
FokI	GGATG	5 cut(s)	175, 974, 995, 1173, 1410
FriOI	GRGCYC	2 cut(s)	1958, 2174
FspBI	CTAG	1 cut(s)	647
GlaI	GCGC	1 cut(s)	476
GsaI	CCCAGC	1 cut(s)	1615
GsuI	CTGGAG	1 cut(s)	159
HaeII	RGCGCY	1 cut(s)	478
HaeIII	GGCC	6 cut(s)	651, 953, 996, 1545, 1566, 1904
HapII	CCGG	5 cut(s)	241, 290, 389, 1355, 2040
HhaI	GCGC	1 cut(s)	477
Hin1II	CATG	8 cut(s)	373, 619, 728, 934, 1001, 1121, 1265, 1945
Hin6I	GCGC	1 cut(s)	475
HinP1I	GCGC	1 cut(s)	475
HindIII	AAGCTT	2 cut(s)	1431, 1738
HinfI	GANTC	6 cut(s)	121, 565, 701, 835, 1874, 2086
HpaII	CCGG	5 cut(s)	241, 290, 389, 1355, 2040
HphI	GGTGA	5 cut(s)	358, 510, 830, 1256, 2029
Hpy166II	GTNNAC	5 cut(s)	298, 312, 922, 1855, 1971
Hpy188III	TCNNGA	4 cut(s)	693, 818, 1124, 1262
Hpy8I	GTNNAC	5 cut(s)	298, 312, 922, 1855, 1971
Hpy99I	CGWCG	1 cut(s)	419
HpyCH4III	ACNGT	7 cut(s)	358, 926, 1017, 1320, 1529, 1975, 2124
HpyCH4IV	ACGT	7 cut(s)	437, 718, 1011, 1664, 1795, 1914, 2142
HpyF10VI	GCNNNNNNNGC	6 cut(s)	394, 467, 866, 1901, 1988, 2207
HpySE526I	ACGT	7 cut(s)	437, 718, 1011, 1664, 1795, 1914, 2142
Hsp92II	CATG	8 cut(s)	373, 619, 728, 934, 1001, 1121, 1265, 1945
HspAI	GCGC	1 cut(s)	475
Ksp22I	TGATCA	1 cut(s)	553
Kzo9I	GATC	7 cut(s)	319, 324, 515, 553, 671, 1383, 1938
LmnI	GCTCC	3 cut(s)	228, 508, 1453
Lsp1109I	GCAGC	6 cut(s)	445, 511, 1489, 1588, 2042, 2151
LweI	GCATC	4 cut(s)	153, 243, 952, 1151
MaeI	CTAG	1 cut(s)	647
MaeII	ACGT	7 cut(s)	437, 718, 1011, 1664, 1795, 1914, 2142
MaeIII	GTNAC	3 cut(s)	208, 719, 926
MalI	GATC	7 cut(s)	321, 326, 517, 555, 673, 1385, 1940
MboI	GATC	7 cut(s)	319, 324, 515, 553, 671, 1383, 1938
MflI	RGATCY	1 cut(s)	319
MhlI	GDGCHC	3 cut(s)	314, 1958, 2174
MlyI	GAGTC	1 cut(s)	695
MmeI	TCCRAC	6 cut(s)	140, 438, 1132, 1445, 1473, 1475
MroXI	GAANNNNTTC	3 cut(s)	732, 1196, 1433
MseI	TTAA	8 cut(s)	597, 915, 977, 2111, 2115, 2184, 2223, 2236
MslI	CAYNNNNRTG	1 cut(s)	305
MspA1I	CMGCKG	3 cut(s)	179, 317, 524
MspI	CCGG	5 cut(s)	241, 290, 389, 1355, 2040
MspR9I	CCNGG	2 cut(s)	291, 2017
Mva1269I	GAATGC	2 cut(s)	871, 1257
MvaI	CCWGG	1 cut(s)	2017
MwoI	GCNNNNNNNGC	6 cut(s)	394, 467, 866, 1901, 1988, 2207
NciI	CCSGG	1 cut(s)	291
NcoI	CCATGG	1 cut(s)	1117
NdeI	CATATG	3 cut(s)	1303, 1711, 2216
NdeII	GATC	7 cut(s)	319, 324, 515, 553, 671, 1383, 1938
NlaIII	CATG	8 cut(s)	373, 619, 728, 934, 1001, 1121, 1265, 1945
NlaIV	GGNNCC	3 cut(s)	230, 321, 510
NmeAIII	GCCGAG	2 cut(s)	1418, 2193
NmuCI	GTSAC	3 cut(s)	208, 719, 926
NspI	RCATGY	1 cut(s)	934
PacI	TTAATTAA	1 cut(s)	2115
PagI	TCATGA	1 cut(s)	1261
PciI	ACATGT	1 cut(s)	930
PcsI	WCGNNNNNNNCGW	1 cut(s)	1379
PctI	GAATGC	2 cut(s)	871, 1257
PdmI	GAANNNNTTC	3 cut(s)	732, 1196, 1433
PfeI	GAWTC	5 cut(s)	121, 565, 835, 1874, 2086
PflMI	CCANNNNNTGG	3 cut(s)	137, 477, 1123
PleI	GAGTC	1 cut(s)	695
PpsI	GAGTC	1 cut(s)	695
Ppu21I	YACGTR	3 cut(s)	438, 1012, 2143
PscI	ACATGT	1 cut(s)	930
PsiI	TTATAA	1 cut(s)	1718
Psp124BI	GAGCTC	1 cut(s)	2174
Psp6I	CCWGG	1 cut(s)	2015
PspFI	CCCAGC	1 cut(s)	1611
PspGI	CCWGG	1 cut(s)	2015
PspN4I	GGNNCC	3 cut(s)	230, 321, 510
PstI	CTGCAG	1 cut(s)	1479
PstNI	CAGNNNCTG	1 cut(s)	548
PsuI	RGATCY	1 cut(s)	319
RsaI	GTAC	8 cut(s)	440, 500, 1014, 1300, 1526, 1854, 2006, 2129
RsaNI	GTAC	8 cut(s)	439, 499, 1013, 1299, 1525, 1853, 2005, 2128
RseI	CAYNNNNRTG	1 cut(s)	305
SacI	GAGCTC	1 cut(s)	2174
SaqAI	TTAA	8 cut(s)	597, 915, 977, 2111, 2115, 2184, 2223, 2236
Sau3AI	GATC	7 cut(s)	319, 324, 515, 553, 671, 1383, 1938
SchI	GAGTC	1 cut(s)	695
ScrFI	CCNGG	2 cut(s)	291, 2017
SduI	GDGCHC	3 cut(s)	314, 1958, 2174
SfaNI	GCATC	4 cut(s)	153, 243, 952, 1151
SfcI	CTRYAG	3 cut(s)	61, 1475, 2175
SmiMI	CAYNNNNRTG	1 cut(s)	305
SmlI	CTYRAG	1 cut(s)	213
SmoI	CTYRAG	1 cut(s)	213
SnaBI	TACGTA	3 cut(s)	438, 1012, 2143
SspMI	CTAG	1 cut(s)	647
SstI	GAGCTC	1 cut(s)	2174
StyD4I	CCNGG	2 cut(s)	289, 2015
StyI	CCWWGG	2 cut(s)	1117, 1896
TaaI	ACNGT	7 cut(s)	358, 926, 1017, 1320, 1529, 1975, 2124
TaiI	ACGT	7 cut(s)	440, 721, 1014, 1667, 1798, 1917, 2145
TaqI	TCGA	8 cut(s)	694, 947, 1032, 1080, 1382, 1690, 1842, 2189
TaqII	GACCGA	1 cut(s)	355
TatI	WGTACW	5 cut(s)	498, 1298, 1524, 1852, 2004
TauI	GCSGC	5 cut(s)	179, 234, 337, 426, 654
TfiI	GAWTC	5 cut(s)	121, 565, 835, 1874, 2086
Tru1I	TTAA	8 cut(s)	597, 915, 977, 2111, 2115, 2184, 2223, 2236
Tru9I	TTAA	8 cut(s)	597, 915, 977, 2111, 2115, 2184, 2223, 2236
TscAI	CASTG	5 cut(s)	361, 645, 1325, 1413, 1534
TseFI	GTSAC	3 cut(s)	208, 719, 926
TseI	GCWGC	6 cut(s)	458, 524, 1477, 1601, 2030, 2164
Tsp45I	GTSAC	3 cut(s)	208, 719, 926
TspRI	CASTG	5 cut(s)	361, 645, 1325, 1413, 1534
Van91I	CCANNNNNTGG	3 cut(s)	137, 477, 1123
VneI	GTGCAC	1 cut(s)	310
XapI	RAATTY	6 cut(s)	431, 1027, 1112, 1196, 1946, 2225
XceI	RCATGY	1 cut(s)	934
XmiI	GTMKAC	1 cut(s)	921
XmnI	GAANNNNTTC	3 cut(s)	732, 1196, 1433
XspI	CTAG	1 cut(s)	647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.