Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001379

Physical Location & Seq

Genomic Coordinates Reverse (-)

15574117 .. 15576422

Gene Structure 2306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G135300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1074 bp

ATGGGTAGCCTTGAAGTGGAGAGAACAACAACAGGATGGGCTGCAAGAGACTCCTCTGGAATTCTCTCACCCTACACCTACACTCTTAGGAACACTGGTCCAGAAGATGTTTATGTCAAAGTCCTAAGCTGTGGGATTTGCCACTCTGATCTTCACCAGGTCAAAAATGACCTTGGTAGGTCAAACTATCCAATGGTTCCCGGGCACGAGGTGGTTGGTGAGGTGTTGGAGGTGGGATCAGATGTGACCAAGTTCAGAGTAGGAGATGTGGTTGGAGTTGGCCTCCTTGTGGGTTGCTGCCGAAGCTGCAACCCATGCAAAACAGACAACGAGCAATACTGCAACAAGAAAATCTGGTCTTACAATGACACTTACTCCGATGGCAAACCCACCCAAGGGGGTTTCGCTGGTGAACTGGTTGCTGATCAAAAGTTTGTGGTAAAGATACCGGACGGCATGGCCTGGGAACAGGCTGCGCCCCTACTATGCGCCGGCGTGACGGTGTACAGCCCGCTGAATCACTTCGGTCTAAATTTGAGCGGATTAAGAGGAGGAATATTAGGGCTTGGGGGTGTAGGACACATGGGGGTGAAGATAGCAAAGGCCATGGGGCACCATGTGACTGTGATAAGTTCTTCAGACAGGAAAAAAGAGGAGGCTTTGGAGCATGTTGGGGCAGATGAGTTCTTGGTCAGCTCAGATGCCACTAAAATGCAGGAGGCTGCAGACTCATTGGATTACATCATTGACACAGTGCCTGTTGTCCACCCACTTGAGCCCTACCTCTCTCTGTTGAGGCTTGATGGAAAATTAATCTTGATGGGTGTTATTGGTGCCCCTTTACAATTTGTCTCCCCCATGGTCATGCTTGGGAGGAAAACAATCACAGGGAGCTTTGTGGGGAGCATGAAGGAAACAGAGGAGATGCTTGAGTTTTGCAAAGAGAAAGGATTGACATCAATGATTGAAGTGGTTAAGATGGATTATGTCAACACAGCCTTTGAGAGGTTGGAGAAGAATGATGTTAGGTACAGGTTCGTTGTGGATGTGGCCGGCAGCAATCTTAATCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016614 GO:0016616 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0045551 GO:0050896 GO:0055114 GO:0071704 GO:0080167 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

358

Amino Acids

38.75

Weight (kDa)

5.43

Isoelectric Point (pI)

25.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001379)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19450 AT4G34230 AT4G34230
fragaria_vesca	FvH4_1g16790 FvH4_1g16790 FvH4_2g05132 FvH4_2g05132 FvH4_2g05132 FvH4_2g05133 FvH4_2g05134
malus_domestica	MD05G1089800.v1.1 MD05G1089900.v1.1 MD10G1097100.v1.1 MD10G1097200.v1.1 MD10G1097500.v1.1
prunus_persica	Prupe.6G228800_v2.0.a1 Prupe.8G135100_v2.0.a1 Prupe.8G135100_v2.0.a1 Prupe.8G135300_v2.0.a1 Prupe.8G135300_v2.0.a1
pyrus_communis	pycom05g08890 pycom10g08310 pycom10g08320
rosa_chinensis	RchiOBHm_Chr2g0106691 RchiOBHm_Chr6g0255061 RchiOBHm_Chr6g0255071
rosa_laevigata	RLG00000014854 RLG00000014856 RLG00000017531
rosa_multiflora	Rmu_co8122326.1_g000001 Rmu_co8379393.1_g000001 Rmu_sc0003745.1_g000001 Rmu_sc0004000.1_g000006 Rmu_sc0004590.1_g000001 Rmu_ssc0000011.1_g000071
rosa_roxburghii	Rroxscaffold_2G00136880 Rroxscaffold_7G00210210 Rroxscaffold_7G00210220
rosa_rugosa	Rorug02G0137800 Rorug05G0556500 Rorug05G0556900 Rorug05G0557000
rosa_samantha	Rh2BG200000 Rh2CG193900 Rh2DG195100 Rh6AG073900 Rh6BG066400 Rh6BG066500 Rh6DG063100 Rh6DG063200
rosa_wichuraiana	Rw2G014850 Rw6G006420 Rw6G006470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	612, 833
AccBSI	CCGCTC	1 cut(s)	540
AciI	CCGC	2 cut(s)	512, 540
AclWI	GGATC	1 cut(s)	244
AcoI	YGGCCR	1 cut(s)	1050
AcsI	RAATTY	2 cut(s)	60, 532
AcuI	CTGAAG	1 cut(s)	621
AdeI	CACNNNGTG	2 cut(s)	211, 619
AfaI	GTAC	2 cut(s)	506, 1031
AfiI	CCNNNNNNNGG	5 cut(s)	16, 289, 395, 396, 1005
AgsI	TTSAA	2 cut(s)	14, 968
AjnI	CCWGG	2 cut(s)	156, 461
AluBI	AGCT	4 cut(s)	129, 306, 696, 894
AluI	AGCT	4 cut(s)	129, 306, 696, 894
Alw26I	GTCTC	2 cut(s)	42, 856
AlwI	GGATC	1 cut(s)	244
AlwNI	CAGNNNCTG	1 cut(s)	758
Ama87I	CYCGRG	1 cut(s)	200
AoxI	GGCC	4 cut(s)	280, 459, 603, 1050
ApeKI	GCWGC	6 cut(s)	41, 297, 306, 473, 722, 1056
ApoI	RAATTY	2 cut(s)	60, 532
AseI	ATTAAT	1 cut(s)	812
Asp700I	GAANNNNTTC	1 cut(s)	521
AspLEI	GCGC	2 cut(s)	478, 491
AspS9I	GGNCC	1 cut(s)	98
AsuC2I	CCSGG	2 cut(s)	201, 202
AsuHPI	GGTGA	5 cut(s)	60, 146, 230, 422, 601
AvaI	CYCGRG	1 cut(s)	200
AvaII	GGWCC	1 cut(s)	98
BaeGI	GKGCMC	3 cut(s)	207, 615, 838
BanI	GGYRCC	2 cut(s)	612, 833
BanII	GRGCYC	1 cut(s)	780
BauI	CACGAG	1 cut(s)	206
BbvI	GCAGC	6 cut(s)	28, 284, 293, 460, 709, 1068
BccI	CCATC	5 cut(s)	30, 374, 797, 814, 973
BceAI	ACGGC	1 cut(s)	469
BciT130I	CCWGG	2 cut(s)	158, 463
BclI	TGATCA	1 cut(s)	424
BcnI	CCSGG	2 cut(s)	201, 202
BcoDI	GTCTC	2 cut(s)	42, 856
BfmI	CTRYAG	1 cut(s)	723
BisI	GCNGC	6 cut(s)	42, 298, 307, 474, 723, 1057
BlsI	GCNGC	6 cut(s)	43, 299, 308, 475, 724, 1058
Bme1390I	CCNGG	4 cut(s)	158, 201, 202, 463
Bme18I	GGWCC	1 cut(s)	98
BmeT110I	CYCGRG	1 cut(s)	200
BmgT120I	GGNCC	1 cut(s)	98
BmiI	GGNNCC	3 cut(s)	198, 614, 835
BmrFI	CCNGG	4 cut(s)	158, 201, 202, 463
BmsI	GCATC	2 cut(s)	691, 915
BplI	GAGNNNNNCTC	2 cut(s)	267, 299
Bpu10I	CCTNAGC	1 cut(s)	125
BpuEI	CTTGAG	2 cut(s)	794, 950
BpuMI	CCSGG	2 cut(s)	201, 202
BsaBI	GATNNNNATC	1 cut(s)	955
BsaJI	CCNNGG	6 cut(s)	172, 200, 394, 462, 606, 858
BsaWI	WCCGGW	1 cut(s)	448
BsaXI	ACNNNNNCTCC	4 cut(s)	255, 285, 359, 389
Bsc4I	CCNNNNNNNGG	5 cut(s)	16, 289, 395, 396, 1005
Bse118I	RCCGGY	2 cut(s)	491, 1052
Bse1I	ACTGG	2 cut(s)	100, 420
Bse8I	GATNNNNATC	1 cut(s)	955
BseBI	CCWGG	2 cut(s)	158, 463
BseDI	CCNNGG	6 cut(s)	172, 200, 394, 462, 606, 858
BseGI	GGATG	2 cut(s)	41, 1051
BseJI	GATNNNNATC	1 cut(s)	955
BseLI	CCNNNNNNNGG	5 cut(s)	16, 289, 395, 396, 1005
BseMII	CTCAG	1 cut(s)	711
BseNI	ACTGG	2 cut(s)	100, 420
BseRI	GAGGAG	4 cut(s)	43, 564, 668, 935
BseSI	GKGCMC	3 cut(s)	207, 615, 838
BseXI	GCAGC	6 cut(s)	28, 284, 293, 460, 709, 1068
BshFI	GGCC	4 cut(s)	282, 461, 605, 1052
BshNI	GGYRCC	2 cut(s)	612, 833
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	4 cut(s)	201, 449, 492, 1053
BslI	CCNNNNNNNGG	5 cut(s)	16, 289, 395, 396, 1005
BsmAI	GTCTC	2 cut(s)	42, 856
BsnI	GGCC	4 cut(s)	282, 461, 605, 1052
BsoBI	CYCGRG	1 cut(s)	200
Bsp1286I	GDGCHC	4 cut(s)	207, 615, 780, 838
Bsp1407I	TGTACA	1 cut(s)	504
Bsp143I	GATC	3 cut(s)	148, 236, 424
Bsp19I	CCATGG	2 cut(s)	606, 858
BspACI	CCGC	2 cut(s)	512, 540
BspANI	GGCC	4 cut(s)	282, 461, 605, 1052
BspCNI	CTCAG	1 cut(s)	710
BspLI	GGNNCC	3 cut(s)	198, 614, 835
BspMAI	CTGCAG	1 cut(s)	727
BspPI	GGATC	1 cut(s)	244
BspT107I	GGYRCC	2 cut(s)	612, 833
BsrBI	CCGCTC	1 cut(s)	540
BsrFI	RCCGGY	2 cut(s)	491, 1052
BsrGI	TGTACA	1 cut(s)	504
BsrI	ACTGG	2 cut(s)	100, 420
BssAI	RCCGGY	2 cut(s)	491, 1052
BssECI	CCNNGG	6 cut(s)	172, 200, 394, 462, 606, 858
BssMI	GATC	3 cut(s)	148, 236, 424
BssSI	CACGAG	1 cut(s)	206
BssT1I	CCWWGG	4 cut(s)	172, 394, 606, 858
Bst2BI	CACGAG	1 cut(s)	206
Bst2UI	CCWGG	2 cut(s)	158, 463
Bst4CI	ACNGT	3 cut(s)	502, 625, 754
BstAPI	GCANNNNNTGC	1 cut(s)	315
BstAUI	TGTACA	1 cut(s)	504
BstC8I	GCNNGC	3 cut(s)	493, 512, 1054
BstDEI	CTNAG	3 cut(s)	86, 125, 697
BstDSI	CCRYGG	2 cut(s)	606, 858
BstENI	CCTNNNNNAGG	1 cut(s)	1003
BstF5I	GGATG	2 cut(s)	41, 1051
BstHHI	GCGC	2 cut(s)	478, 491
BstKTI	GATC	3 cut(s)	151, 239, 427
BstMAI	GTCTC	2 cut(s)	42, 856
BstMBI	GATC	3 cut(s)	148, 236, 424
BstMWI	GCNNNNNNNGC	3 cut(s)	303, 306, 315
BstNI	CCWGG	2 cut(s)	158, 463
BstNSI	RCATGY	1 cut(s)	671
BstSCI	CCNGG	4 cut(s)	156, 199, 200, 461
BstSFI	CTRYAG	1 cut(s)	723
BstSLI	GKGCMC	3 cut(s)	207, 615, 838
BstV1I	GCAGC	6 cut(s)	28, 284, 293, 460, 709, 1068
BsuRI	GGCC	4 cut(s)	282, 461, 605, 1052
BtgI	CCRYGG	2 cut(s)	606, 858
BtsCI	GGATG	2 cut(s)	41, 1051
BtsIMutI	CAGTG	2 cut(s)	93, 759
Cac8I	GCNNGC	3 cut(s)	493, 512, 1054
CaiI	CAGNNNCTG	1 cut(s)	758
CfoI	GCGC	2 cut(s)	478, 491
Cfr10I	RCCGGY	2 cut(s)	491, 1052
Cfr13I	GGNCC	1 cut(s)	98
Cfr9I	CCCGGG	1 cut(s)	200
CsiI	ACCWGGT	1 cut(s)	156
Csp6I	GTAC	2 cut(s)	505, 1030
CviAII	CATG	9 cut(s)	315, 457, 583, 607, 617, 668, 859, 865, 907
CviQI	GTAC	2 cut(s)	505, 1030
DdeI	CTNAG	3 cut(s)	86, 125, 697
DpnI	GATC	3 cut(s)	150, 238, 426
DpnII	GATC	3 cut(s)	148, 236, 424
DraIII	CACNNNGTG	2 cut(s)	211, 619
EaeI	YGGCCR	1 cut(s)	1050
Eco130I	CCWWGG	4 cut(s)	172, 394, 606, 858
Eco24I	GRGCYC	1 cut(s)	780
Eco47I	GGWCC	1 cut(s)	98
Eco57I	CTGAAG	1 cut(s)	621
Eco88I	CYCGRG	1 cut(s)	200
EcoNI	CCTNNNNNAGG	1 cut(s)	1003
EcoRI	GAATTC	1 cut(s)	60
EcoRII	CCWGG	2 cut(s)	156, 461
EcoT14I	CCWWGG	4 cut(s)	172, 394, 606, 858
EcoT38I	GRGCYC	1 cut(s)	780
ErhI	CCWWGG	4 cut(s)	172, 394, 606, 858
FaeI	CATG	9 cut(s)	318, 460, 586, 610, 620, 671, 862, 868, 910
FatI	CATG	9 cut(s)	314, 456, 582, 606, 616, 667, 858, 864, 906
FauI	CCCGC	1 cut(s)	519
FbaI	TGATCA	1 cut(s)	424
Fnu4HI	GCNGC	6 cut(s)	42, 298, 307, 474, 723, 1057
FokI	GGATG	2 cut(s)	48, 1058
FriOI	GRGCYC	1 cut(s)	780
Fsp4HI	GCNGC	6 cut(s)	42, 298, 307, 474, 723, 1057
GlaI	GCGC	2 cut(s)	477, 490
GluI	GCNGC	6 cut(s)	42, 298, 307, 474, 723, 1057
HaeIII	GGCC	4 cut(s)	282, 461, 605, 1052
HapII	CCGG	4 cut(s)	201, 449, 492, 1053
HhaI	GCGC	2 cut(s)	478, 491
Hin1II	CATG	9 cut(s)	318, 460, 586, 610, 620, 671, 862, 868, 910
Hin6I	GCGC	2 cut(s)	476, 489
HinP1I	GCGC	2 cut(s)	476, 489
HincII	GTYRAC	1 cut(s)	991
HindII	GTYRAC	1 cut(s)	991
HinfI	GANTC	3 cut(s)	50, 517, 728
HpaII	CCGG	4 cut(s)	201, 449, 492, 1053
HphI	GGTGA	5 cut(s)	60, 146, 230, 422, 601
Hpy166II	GTNNAC	4 cut(s)	413, 505, 766, 991
Hpy188I	TCNGA	6 cut(s)	148, 241, 257, 379, 640, 700
Hpy188III	TCNNGA	3 cut(s)	57, 101, 817
Hpy8I	GTNNAC	4 cut(s)	413, 505, 766, 991
HpyAV	CCTTC	1 cut(s)	904
HpyCH4III	ACNGT	3 cut(s)	502, 625, 754
HpyCH4V	TGCA	7 cut(s)	44, 309, 318, 342, 715, 725, 939
HpyF10VI	GCNNNNNNNGC	3 cut(s)	303, 306, 315
HpyF3I	CTNAG	3 cut(s)	86, 125, 697
Hsp92II	CATG	9 cut(s)	318, 460, 586, 610, 620, 671, 862, 868, 910
HspAI	GCGC	2 cut(s)	476, 489
KroI	GCCGGC	2 cut(s)	491, 1052
KroNI	GCCGGC	2 cut(s)	493, 1054
Ksp22I	TGATCA	1 cut(s)	424
Kzo9I	GATC	3 cut(s)	148, 236, 424
LmnI	GCTCC	3 cut(s)	664, 891, 903
Lsp1109I	GCAGC	6 cut(s)	28, 284, 293, 460, 709, 1068
LweI	GCATC	2 cut(s)	691, 915
MabI	ACCWGGT	1 cut(s)	156
MaeIII	GTNAC	3 cut(s)	244, 496, 619
MalI	GATC	3 cut(s)	150, 238, 426
MbiI	CCGCTC	1 cut(s)	540
MboI	GATC	3 cut(s)	148, 236, 424
MboII	GAAGA	5 cut(s)	116, 143, 604, 627, 1027
MhlI	GDGCHC	4 cut(s)	207, 615, 780, 838
MluCI	AATT	4 cut(s)	60, 532, 809, 845
MlyI	GAGTC	2 cut(s)	44, 722
MmeI	TCCRAC	3 cut(s)	207, 253, 990
MreI	CGCCGGCG	1 cut(s)	491
MroNI	GCCGGC	2 cut(s)	491, 1052
MroXI	GAANNNNTTC	1 cut(s)	521
MseI	TTAA	4 cut(s)	545, 812, 975, 1065
MslI	CAYNNNNRTG	3 cut(s)	587, 710, 863
MspA1I	CMGCKG	1 cut(s)	514
MspI	CCGG	4 cut(s)	201, 449, 492, 1053
MspR9I	CCNGG	4 cut(s)	158, 201, 202, 463
MvaI	CCWGG	2 cut(s)	158, 463
MwoI	GCNNNNNNNGC	3 cut(s)	303, 306, 315
NaeI	GCCGGC	2 cut(s)	493, 1054
NciI	CCSGG	2 cut(s)	201, 202
NcoI	CCATGG	2 cut(s)	606, 858
NdeII	GATC	3 cut(s)	148, 236, 424
NgoMIV	GCCGGC	2 cut(s)	491, 1052
NlaIII	CATG	9 cut(s)	318, 460, 586, 610, 620, 671, 862, 868, 910
NlaIV	GGNNCC	3 cut(s)	198, 614, 835
NmuCI	GTSAC	3 cut(s)	244, 496, 619
NspI	RCATGY	1 cut(s)	671
PdiI	GCCGGC	2 cut(s)	493, 1054
PdmI	GAANNNNTTC	1 cut(s)	521
PfeI	GAWTC	1 cut(s)	517
PkrI	GCNGC	6 cut(s)	43, 299, 308, 475, 724, 1058
PleI	GAGTC	2 cut(s)	44, 722
PpsI	GAGTC	2 cut(s)	44, 722
PshBI	ATTAAT	1 cut(s)	812
Psp6I	CCWGG	2 cut(s)	156, 461
PspGI	CCWGG	2 cut(s)	156, 461
PspN4I	GGNNCC	3 cut(s)	198, 614, 835
PspPI	GGNCC	1 cut(s)	98
PstI	CTGCAG	1 cut(s)	727
PstNI	CAGNNNCTG	1 cut(s)	758
RsaI	GTAC	2 cut(s)	506, 1031
RsaNI	GTAC	2 cut(s)	505, 1030
RseI	CAYNNNNRTG	3 cut(s)	587, 710, 863
SaqAI	TTAA	4 cut(s)	545, 812, 975, 1065
SatI	GCNGC	6 cut(s)	42, 298, 307, 474, 723, 1057
Sau3AI	GATC	3 cut(s)	148, 236, 424
Sau96I	GGNCC	1 cut(s)	98
SchI	GAGTC	2 cut(s)	44, 722
ScrFI	CCNGG	4 cut(s)	158, 201, 202, 463
SduI	GDGCHC	4 cut(s)	207, 615, 780, 838
SexAI	ACCWGGT	1 cut(s)	156
SfaNI	GCATC	2 cut(s)	691, 915
SfcI	CTRYAG	1 cut(s)	723
SgrAI	CRCCGGYG	1 cut(s)	491
SinI	GGWCC	1 cut(s)	98
SmaI	CCCGGG	1 cut(s)	202
SmiMI	CAYNNNNRTG	3 cut(s)	587, 710, 863
SmlI	CTYRAG	2 cut(s)	773, 929
SmoI	CTYRAG	2 cut(s)	773, 929
Sse9I	AATT	4 cut(s)	60, 532, 809, 845
SsiI	CCGC	2 cut(s)	512, 540
SspI	AATATT	1 cut(s)	558
StyD4I	CCNGG	4 cut(s)	156, 199, 200, 461
StyI	CCWWGG	4 cut(s)	172, 394, 606, 858
TaaI	ACNGT	3 cut(s)	502, 625, 754
TaqII	GACCGA	1 cut(s)	515
TasI	AATT	4 cut(s)	60, 532, 809, 845
TatI	WGTACW	1 cut(s)	504
TfiI	GAWTC	1 cut(s)	517
Tru1I	TTAA	4 cut(s)	545, 812, 975, 1065
Tru9I	TTAA	4 cut(s)	545, 812, 975, 1065
TscAI	CASTG	2 cut(s)	100, 759
TseFI	GTSAC	3 cut(s)	244, 496, 619
TseI	GCWGC	6 cut(s)	41, 297, 306, 473, 722, 1056
Tsp45I	GTSAC	3 cut(s)	244, 496, 619
TspDTI	ATGAA	1 cut(s)	923
TspMI	CCCGGG	1 cut(s)	200
TspRI	CASTG	2 cut(s)	100, 759
VpaK11BI	GGWCC	1 cut(s)	98
VspI	ATTAAT	1 cut(s)	812
XagI	CCTNNNNNAGG	1 cut(s)	1003
XapI	RAATTY	2 cut(s)	60, 532
XceI	RCATGY	1 cut(s)	671
XmaI	CCCGGG	1 cut(s)	200
XmnI	GAANNNNTTC	1 cut(s)	521

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.