Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001379

Physical Location & Seq

Genomic Coordinates Forward (+)

74536180 .. 74541532

Gene Structure 5353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0556900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGGGAACGGAGGGAACAGTTCACCATTATTTGAGACGAAGAGGGCCAAGGGGATAGTTCTGTATAGGCTTTTTGCTGCGTCTATTTTCGTGGGTATATGTTTCGTCTGGGTTTACAGGGTGAGTCATATCCCAAAAGCTGGAGAAGATGGGAGGTTTGGTTGGATGGGTCTGCTGGGTGCTGAGTTATGGTTCGGGTTTTACTGGCTCCTCACTCAAGCCTGCCGGTGGAACCGCGTGTATCGGCACACCTTCAGGGACAGGCTCTCGGAGAGATATGAGGATGAGTTGCCGGGAGTGGACATATTCGTGTGCACGGCAGACCCAATTATAGAGCCGCCGATGATGGTGATAAACACTGTTTTATCAGTAATGGCTTATGATTACCCACCGGAGAAGCTCAGCGTGTATCTATCCGATGATGGCGGATCCGAACTTACATGTTATGCTCTATTGGAAGCTGCTGAGTTTGCTAAGCATTGGATACCATATTGCAAGAAGTACAGTGTGGAGCCAAGGTCACCTGCTGCTTATTTTGCCTCACTAGCTTCTGATAATGCAGGGGATTTCACTCTCATTAAGAAATTATACAAAGACATGGAGAATAAAATCGAAATTGCAGTGAAGTTAGGCAGCATTTCTGAAGAAGTACGATCAAAACACAGAGGCTTTTCTCAGTGGGATTCGTATTCATCTCCTCGTGACCATGACACCATTCTACAAATAGTAATTGATGGGAGAGATCCAAATGCAAGAGATGTTGAAGGGTGTGGATTGCCAACCTTAGTGTATTTGGCTCGCGAGAAGAGACCCCAATATCACCATAACTTCAAAGCCGGAGCTATGAATGCACTGATTAGGGTATCTTCAAACATTAGCAATGGGAAGGTTATTCTTAATGTAGACTGTGATATGTATTCAAACAACTCTAAGGCCATAAGGGATGCACTCTGCTTCTTCCTGGATGAAGAAAAAGGCCAGGAGATTGCATTCGTACAGTTCCCACAGAATTTCGAAAATGTTACCAAGAATGACGTATATAGTAGTACACTACGAATAATCAGTGAGGTGGAATTTCATGGTTTGGATGGTTATGGGGGCCCTTTATATATTGGAACTGGATGCTTCCACAGAAGAGATACTCTTTGTGGGAGGAAGTTCAGCAAAGGATATAAGAGTGAACTGAAGTGGGAGAATAGAAAAGGAGAAGAAACAAGCATTCCTAAATTGGAAGAAAGTTCAAAAAGTCTAGCAAGTTGTACATTTGAAGAGAACACTCAATGGGGAAAAGAGATGGGTTTGAAATATGGTTGTCCGGTTGAGGATGTTATAACAGGGTTATCCATCCAATGCCGTGGATGGAAATCAGTGTACTGCAATCCACCTAGGAAAGCTTTCTTAGGATTAGCTCCAACTACACTGCCTCAGACACTTTTGCAGCACAAGAGATGGTCAGAAGGTGATTTCCAGATTTTGGTTTCTAAGTATAGCCCTGCATTGTATGGGCATGGAAAGATTAGTTTAGGCCTTCAACTTGGATATTGCTGCTACTGCCTGTGGGCTCCAAATTGCTTGGCGACGCTATTTTACTCAATTCTCCCTTCAATTTACCTTCTTAGAGGCATTTCTGTATTCCCACAGATCTCAAGTCCGTGGTTCATACCATTTGCGTATGTGATAATTGCCAAGTACACTTGGAGCTTTGGGGAGTTTTTGTGGTCTGGTGGCACAATCTTGGGATGGTGGAACGACCAACGAATATGGCTATACAAAAGAACAAGCTCCTACCTATTTGCCTTCATCGATACCATTTTGTACTGTCTGGGGTATTCGGATTCAGCGTTTGTAATAACAGCCAAGGTGGCTGATGAAGATGTGTCACAACGATACGAGAAAGAGATTATGGAATTCGGAGCCTCATCTCCAATGTTCGTCATATTAGCAACAGTTGCATTGCTCAATTTGTACTGCTTTGCTGGGTTTCTCAAGGAAGCGATCACTAGAAAAGGCATTGTTGGAGTTTATGAGACAGTGGCTTTGCAAATTCTTCTATGTGGTGTTTTAATTGTCATCAACCTGCCTTTGTACCAAGCTCTTTACTTGAGGAAAGACAGTGGAAAAATGCCAAGTTCTGTGGTATTTAAATCGATGGCATTTGTTGCATTTTCTTGTGTATGTACTAAATTCTTGTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0016491 GO:0016614 GO:0016616 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0045551 GO:0050896 GO:0055114 GO:0071704 GO:0080167 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

731

Amino Acids

82.8

Weight (kDa)

7.88

Isoelectric Point (pI)

41.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	100 - 389	5.1e-91	Cellulose synthase
Cellulose_synt	PF03552	414 - 716	3.6e-43	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001379)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19450 AT4G34230 AT4G34230
fragaria_vesca	FvH4_1g16790 FvH4_1g16790 FvH4_2g05132 FvH4_2g05132 FvH4_2g05132 FvH4_2g05133 FvH4_2g05134
malus_domestica	MD05G1089800.v1.1 MD05G1089900.v1.1 MD10G1097100.v1.1 MD10G1097200.v1.1 MD10G1097500.v1.1
prunus_persica	Prupe.6G228800_v2.0.a1 Prupe.8G135100_v2.0.a1 Prupe.8G135100_v2.0.a1 Prupe.8G135300_v2.0.a1 Prupe.8G135300_v2.0.a1
pyrus_communis	pycom05g08890 pycom10g08310 pycom10g08320
rosa_chinensis	RchiOBHm_Chr2g0106691 RchiOBHm_Chr6g0255061 RchiOBHm_Chr6g0255071
rosa_laevigata	RLG00000014854 RLG00000014856 RLG00000017531
rosa_multiflora	Rmu_co8122326.1_g000001 Rmu_co8379393.1_g000001 Rmu_sc0003745.1_g000001 Rmu_sc0004000.1_g000006 Rmu_sc0004590.1_g000001 Rmu_ssc0000011.1_g000071
rosa_roxburghii	Rroxscaffold_2G00136880 Rroxscaffold_7G00210210 Rroxscaffold_7G00210220
rosa_rugosa	Rorug02G0137800 Rorug05G0556500 Rorug05G0556900 Rorug05G0557000
rosa_samantha	Rh2BG200000 Rh2CG193900 Rh2DG195100 Rh6AG073900 Rh6BG066400 Rh6BG066500 Rh6DG063100 Rh6DG063200
rosa_wichuraiana	Rw2G014850 Rw6G006420 Rw6G006470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1331
AarI	CACCTGC	1 cut(s)	532
Acc36I	ACCTGC	2 cut(s)	532, 2085
AccB7I	CCANNNNNTGG	2 cut(s)	140, 1474
AccI	GTMKAC	1 cut(s)	903
AccII	CGCG	2 cut(s)	237, 801
AciI	CCGC	3 cut(s)	235, 338, 426
AclWI	GGATC	3 cut(s)	423, 436, 737
AcsI	RAATTY	5 cut(s)	1009, 1073, 1907, 2043, 2183
AcuI	CTGAAG	3 cut(s)	238, 663, 1205
AfiI	CCNNNNNNNGG	3 cut(s)	140, 228, 1474
AflIII	ACRYGT	1 cut(s)	440
AgsI	TTSAA	9 cut(s)	764, 832, 870, 921, 1242, 1268, 1303, 1532, 1605
AjnI	CCWGG	2 cut(s)	960, 978
Alw21I	GWGCWC	1 cut(s)	317
Alw26I	GTCTC	3 cut(s)	29, 802, 2021
Alw44I	GTGCAC	1 cut(s)	313
AlwI	GGATC	3 cut(s)	423, 436, 737
AoxI	GGCC	5 cut(s)	45, 933, 976, 1099, 1525
ApaI	GGGCCC	1 cut(s)	1103
ApaLI	GTGCAC	1 cut(s)	313
ApeKI	GCWGC	6 cut(s)	77, 461, 527, 633, 1438, 1545
ApoI	RAATTY	5 cut(s)	1009, 1073, 1907, 2043, 2183
ArsI	GACNNNNNNTTYG	2 cut(s)	2020, 2052
Asp700I	GAANNNNTTC	1 cut(s)	1394
AspA2I	CCTAGG	1 cut(s)	1385
AspS9I	GGNCC	3 cut(s)	45, 1099, 1100
AsuC2I	CCSGG	1 cut(s)	294
AsuHPI	GGTGA	6 cut(s)	15, 133, 361, 513, 812, 1472
AsuII	TTCGAA	1 cut(s)	1014
AvrII	CCTAGG	1 cut(s)	1385
BaeGI	GKGCMC	2 cut(s)	317, 1103
BamHI	GGATCC	1 cut(s)	428
BanII	GRGCYC	2 cut(s)	1103, 1564
BauI	CACGAG	1 cut(s)	699
Bbv12I	GWGCWC	1 cut(s)	317
BbvI	GCAGC	6 cut(s)	64, 448, 514, 645, 1450, 1532
BceAI	ACGGC	2 cut(s)	333, 1338
BciT130I	CCWGG	2 cut(s)	962, 980
BciVI	GTATCC	1 cut(s)	477
BcnI	CCSGG	1 cut(s)	294
BcoDI	GTCTC	3 cut(s)	29, 802, 2021
BfaI	CTAG	4 cut(s)	545, 1250, 1386, 2001
BfuAI	ACCTGC	2 cut(s)	532, 2085
BfuI	GTATCC	1 cut(s)	477
BglI	GCCNNNNNGGC	1 cut(s)	1862
BglII	AGATCT	1 cut(s)	1641
BisI	GCNGC	7 cut(s)	78, 338, 462, 528, 634, 1439, 1546
BlnI	CCTAGG	1 cut(s)	1385
BlpI	GCTNAGC	2 cut(s)	401, 474
BlsI	GCNGC	7 cut(s)	79, 339, 463, 529, 635, 1440, 1547
Bme1390I	CCNGG	3 cut(s)	294, 962, 980
BmgT120I	GGNCC	3 cut(s)	45, 1099, 1100
BmiI	GGNNCC	8 cut(s)	209, 233, 430, 513, 1100, 1101, 1563, 1915
BmrFI	CCNGG	3 cut(s)	294, 962, 980
BmsI	GCATC	2 cut(s)	934, 1112
BpmI	CTGGAG	1 cut(s)	162
Bpu1102I	GCTNAGC	2 cut(s)	401, 474
Bpu14I	TTCGAA	1 cut(s)	1014
BpuEI	CTTGAG	4 cut(s)	201, 1630, 1970, 2122
BpuMI	CCSGG	1 cut(s)	294
Bsa29I	ATCGAT	2 cut(s)	1803, 2147
BsaBI	GATNNNNATC	1 cut(s)	1363
BsaI	GGTCTC	1 cut(s)	802
BsaJI	CCNNGG	6 cut(s)	48, 515, 1354, 1385, 1652, 1857
BsaWI	WCCGGW	2 cut(s)	391, 1315
BsaXI	ACNNNNNCTCC	6 cut(s)	145, 175, 503, 533, 1700, 1730
Bsc4I	CCNNNNNNNGG	3 cut(s)	140, 228, 1474
Bse118I	RCCGGY	1 cut(s)	225
Bse1I	ACTGG	2 cut(s)	209, 1123
Bse3DI	GCAATG	2 cut(s)	886, 1952
Bse8I	GATNNNNATC	1 cut(s)	1363
BseBI	CCWGG	2 cut(s)	962, 980
BseCI	ATCGAT	2 cut(s)	1803, 2147
BseDI	CCNNGG	6 cut(s)	48, 515, 1354, 1385, 1652, 1857
BseJI	GATNNNNATC	1 cut(s)	1363
BseLI	CCNNNNNNNGG	3 cut(s)	140, 228, 1474
BseMI	GCAATG	2 cut(s)	886, 1952
BseMII	CTCAG	5 cut(s)	174, 415, 456, 689, 1439
BseNI	ACTGG	2 cut(s)	209, 1123
BseRI	GAGGAG	2 cut(s)	200, 687
BseSI	GKGCMC	2 cut(s)	317, 1103
BseXI	GCAGC	6 cut(s)	64, 448, 514, 645, 1450, 1532
BseYI	CCCAGC	2 cut(s)	175, 1976
Bsh1236I	CGCG	2 cut(s)	237, 801
BshFI	GGCC	5 cut(s)	47, 935, 978, 1101, 1527
BshVI	ATCGAT	2 cut(s)	1803, 2147
BsiHKAI	GWGCWC	1 cut(s)	317
BsiSI	CCGG	5 cut(s)	226, 293, 392, 837, 1316
BslFI	GGGAC	1 cut(s)	272
BslI	CCNNNNNNNGG	3 cut(s)	140, 228, 1474
BsmAI	GTCTC	3 cut(s)	29, 802, 2021
BsmBI	CGTCTC	1 cut(s)	29
BsmFI	GGGAC	1 cut(s)	272
BsmI	GAATGC	3 cut(s)	853, 989, 1218
BsnI	GGCC	5 cut(s)	47, 935, 978, 1101, 1527
Bso31I	GGTCTC	1 cut(s)	802
Bsp119I	TTCGAA	1 cut(s)	1014
Bsp120I	GGGCCC	1 cut(s)	1099
Bsp1286I	GDGCHC	3 cut(s)	317, 1103, 1564
Bsp1407I	TGTACA	1 cut(s)	1259
Bsp143I	GATC	5 cut(s)	428, 653, 742, 1641, 1995
Bsp1720I	GCTNAGC	2 cut(s)	401, 474
Bsp68I	TCGCGA	1 cut(s)	801
BspACI	CCGC	3 cut(s)	235, 338, 426
BspANI	GGCC	5 cut(s)	47, 935, 978, 1101, 1527
BspCNI	CTCAG	5 cut(s)	175, 414, 457, 688, 1438
BspDI	ATCGAT	2 cut(s)	1803, 2147
BspFNI	CGCG	2 cut(s)	237, 801
BspLI	GGNNCC	8 cut(s)	209, 233, 430, 513, 1100, 1101, 1563, 1915
BspMI	ACCTGC	2 cut(s)	532, 2085
BspPI	GGATC	3 cut(s)	423, 436, 737
BspT104I	TTCGAA	1 cut(s)	1014
BspTNI	GGTCTC	1 cut(s)	802
BsrDI	GCAATG	2 cut(s)	886, 1952
BsrFI	RCCGGY	1 cut(s)	225
BsrGI	TGTACA	1 cut(s)	1259
BsrI	ACTGG	2 cut(s)	209, 1123
BssAI	RCCGGY	1 cut(s)	225
BssECI	CCNNGG	6 cut(s)	48, 515, 1354, 1385, 1652, 1857
BssMI	GATC	5 cut(s)	428, 653, 742, 1641, 1995
BssSI	CACGAG	1 cut(s)	699
BssT1I	CCWWGG	4 cut(s)	48, 515, 1385, 1857
Bst2BI	CACGAG	1 cut(s)	699
Bst2UI	CCWGG	2 cut(s)	962, 980
Bst4CI	ACNGT	9 cut(s)	20, 361, 506, 908, 999, 1820, 1948, 2032, 2114
Bst6I	CTCTTC	4 cut(s)	35, 800, 1129, 1263
BstAPI	GCANNNNNTGC	2 cut(s)	1949, 2159
BstAUI	TGTACA	1 cut(s)	1259
BstBI	TTCGAA	1 cut(s)	1014
BstC8I	GCNNGC	2 cut(s)	223, 799
BstDSI	CCRYGG	2 cut(s)	1354, 1652
BstEII	GGTNACC	1 cut(s)	519
BstFNI	CGCG	2 cut(s)	237, 801
BstKTI	GATC	5 cut(s)	431, 656, 745, 1644, 1998
BstMAI	GTCTC	3 cut(s)	29, 802, 2021
BstMBI	GATC	5 cut(s)	428, 653, 742, 1641, 1995
BstMWI	GCNNNNNNNGC	8 cut(s)	470, 536, 545, 848, 1551, 1862, 1949, 2159
BstNI	CCWGG	2 cut(s)	962, 980
BstNSI	RCATGY	1 cut(s)	444
BstPI	GGTNACC	1 cut(s)	519
BstSCI	CCNGG	3 cut(s)	292, 960, 978
BstSLI	GKGCMC	2 cut(s)	317, 1103
BstUI	CGCG	2 cut(s)	237, 801
BstV1I	GCAGC	6 cut(s)	64, 448, 514, 645, 1450, 1532
BstX2I	RGATCY	3 cut(s)	428, 742, 1641
BstXI	CCANNNNNNTGG	1 cut(s)	1355
BstYI	RGATCY	3 cut(s)	428, 742, 1641
Bsu15I	ATCGAT	2 cut(s)	1803, 2147
BsuI	GTATCC	1 cut(s)	477
BsuRI	GGCC	5 cut(s)	47, 935, 978, 1101, 1527
BsuTUI	ATCGAT	2 cut(s)	1803, 2147
BtgI	CCRYGG	2 cut(s)	1354, 1652
BtsI	GCAGTG	2 cut(s)	627, 1418
BtuMI	TCGCGA	1 cut(s)	801
BveI	ACCTGC	2 cut(s)	532, 2085
Cac8I	GCNNGC	2 cut(s)	223, 799
Cfr10I	RCCGGY	1 cut(s)	225
Cfr13I	GGNCC	3 cut(s)	45, 1099, 1100
ClaI	ATCGAT	2 cut(s)	1803, 2147
CseI	GACGC	2 cut(s)	69, 1588
CspCI	CAANNNNNGTGG	2 cut(s)	2115, 2150
CviAII	CATG	5 cut(s)	441, 598, 707, 1079, 1508
DpnI	GATC	5 cut(s)	430, 655, 744, 1643, 1997
DpnII	GATC	5 cut(s)	428, 653, 742, 1641, 1995
DraI	TTTAAA	1 cut(s)	2143
Eam1104I	CTCTTC	4 cut(s)	35, 800, 1129, 1263
EarI	CTCTTC	4 cut(s)	35, 800, 1129, 1263
EciI	GGCGGA	1 cut(s)	441
Eco130I	CCWWGG	4 cut(s)	48, 515, 1385, 1857
Eco147I	AGGCCT	1 cut(s)	1527
Eco24I	GRGCYC	2 cut(s)	1103, 1564
Eco31I	GGTCTC	1 cut(s)	802
Eco57I	CTGAAG	3 cut(s)	238, 663, 1205
Eco91I	GGTNACC	1 cut(s)	519
EcoO109I	RGGNCCY	2 cut(s)	1099, 1100
EcoO65I	GGTNACC	1 cut(s)	519
EcoRI	GAATTC	1 cut(s)	1907
EcoRII	CCWGG	2 cut(s)	960, 978
EcoT14I	CCWWGG	4 cut(s)	48, 515, 1385, 1857
EcoT38I	GRGCYC	2 cut(s)	1103, 1564
ErhI	CCWWGG	4 cut(s)	48, 515, 1385, 1857
Esp3I	CGTCTC	1 cut(s)	29
FaeI	CATG	5 cut(s)	444, 601, 710, 1082, 1511
FaqI	GGGAC	1 cut(s)	272
FatI	CATG	5 cut(s)	440, 597, 706, 1078, 1507
FblI	GTMKAC	1 cut(s)	903
Fnu4HI	GCNGC	7 cut(s)	78, 338, 462, 528, 634, 1439, 1546
FriOI	GRGCYC	2 cut(s)	1103, 1564
Fsp4HI	GCNGC	7 cut(s)	78, 338, 462, 528, 634, 1439, 1546
FspBI	CTAG	4 cut(s)	545, 1250, 1386, 2001
GluI	GCNGC	7 cut(s)	78, 338, 462, 528, 634, 1439, 1546
GsaI	CCCAGC	2 cut(s)	179, 1980
GsuI	CTGGAG	1 cut(s)	162
HaeIII	GGCC	5 cut(s)	47, 935, 978, 1101, 1527
HapII	CCGG	5 cut(s)	226, 293, 392, 837, 1316
HgaI	GACGC	2 cut(s)	69, 1588
Hin1II	CATG	5 cut(s)	444, 601, 710, 1082, 1511
HindIII	AAGCTT	1 cut(s)	1392
HinfI	GANTC	3 cut(s)	124, 683, 1835
HpaII	CCGG	5 cut(s)	226, 293, 392, 837, 1316
HphI	GGTGA	6 cut(s)	15, 133, 361, 513, 812, 1472
Hpy166II	GTNNAC	9 cut(s)	23, 115, 301, 315, 904, 1049, 1181, 1372, 1692
Hpy188I	TCNGA	9 cut(s)	271, 418, 433, 553, 643, 1428, 1456, 1834, 1913
Hpy188III	TCNNGA	3 cut(s)	701, 800, 1468
Hpy8I	GTNNAC	9 cut(s)	23, 115, 301, 315, 904, 1049, 1181, 1372, 1692
Hpy99I	CGWCG	1 cut(s)	1582
HpyAV	CCTTC	8 cut(s)	262, 758, 880, 1451, 1538, 1611, 1622, 1807
HpyCH4III	ACNGT	9 cut(s)	20, 361, 506, 908, 999, 1820, 1948, 2032, 2114
HpyCH4IV	ACGT	1 cut(s)	1035
HpyF10VI	GCNNNNNNNGC	8 cut(s)	470, 536, 545, 848, 1551, 1862, 1949, 2159
HpySE526I	ACGT	1 cut(s)	1035
Hsp92II	CATG	5 cut(s)	444, 601, 710, 1082, 1511
Kzo9I	GATC	5 cut(s)	428, 653, 742, 1641, 1995
LmnI	GCTCC	8 cut(s)	213, 511, 839, 1414, 1567, 1698, 1787, 1913
Lsp1109I	GCAGC	6 cut(s)	64, 448, 514, 645, 1450, 1532
LweI	GCATC	2 cut(s)	934, 1112
MaeI	CTAG	4 cut(s)	545, 1250, 1386, 2001
MaeII	ACGT	1 cut(s)	1035
MaeIII	GTNAC	4 cut(s)	519, 701, 1021, 1878
MalI	GATC	5 cut(s)	430, 655, 744, 1643, 1997
MboI	GATC	5 cut(s)	428, 653, 742, 1641, 1995
MflI	RGATCY	3 cut(s)	428, 742, 1641
MhlI	GDGCHC	3 cut(s)	317, 1103, 1564
MlyI	GAGTC	1 cut(s)	133
MmeI	TCCRAC	3 cut(s)	143, 1436, 1996
MroXI	GAANNNNTTC	1 cut(s)	1394
MseI	TTAA	5 cut(s)	579, 897, 2063, 2142, 2194
MslI	CAYNNNNRTG	1 cut(s)	308
MspI	CCGG	5 cut(s)	226, 293, 392, 837, 1316
MspR9I	CCNGG	3 cut(s)	294, 962, 980
Mva1269I	GAATGC	3 cut(s)	853, 989, 1218
MvaI	CCWGG	2 cut(s)	962, 980
MvnI	CGCG	2 cut(s)	237, 801
MwoI	GCNNNNNNNGC	8 cut(s)	470, 536, 545, 848, 1551, 1862, 1949, 2159
NciI	CCSGG	1 cut(s)	294
NdeII	GATC	5 cut(s)	428, 653, 742, 1641, 1995
NlaIII	CATG	5 cut(s)	444, 601, 710, 1082, 1511
NlaIV	GGNNCC	8 cut(s)	209, 233, 430, 513, 1100, 1101, 1563, 1915
NmuCI	GTSAC	3 cut(s)	519, 701, 1878
NruI	TCGCGA	1 cut(s)	801
NspI	RCATGY	1 cut(s)	444
NspV	TTCGAA	1 cut(s)	1014
PaqCI	CACCTGC	1 cut(s)	532
PceI	AGGCCT	1 cut(s)	1527
PciI	ACATGT	1 cut(s)	440
PcsI	WCGNNNNNNNCGW	1 cut(s)	1838
PctI	GAATGC	3 cut(s)	853, 989, 1218
PdmI	GAANNNNTTC	1 cut(s)	1394
PfeI	GAWTC	2 cut(s)	683, 1835
PflMI	CCANNNNNTGG	2 cut(s)	140, 1474
PfoI	TCCNGGA	1 cut(s)	960
PkrI	GCNGC	7 cut(s)	79, 339, 463, 529, 635, 1440, 1547
PleI	GAGTC	1 cut(s)	132
PpsI	GAGTC	1 cut(s)	132
PscI	ACATGT	1 cut(s)	440
PsiI	TTATAA	1 cut(s)	1331
Psp6I	CCWGG	2 cut(s)	960, 978
PspEI	GGTNACC	1 cut(s)	519
PspFI	CCCAGC	2 cut(s)	175, 1976
PspGI	CCWGG	2 cut(s)	960, 978
PspN4I	GGNNCC	8 cut(s)	209, 233, 430, 513, 1100, 1101, 1563, 1915
PspOMI	GGGCCC	1 cut(s)	1099
PspPI	GGNCC	3 cut(s)	45, 1099, 1100
PsuI	RGATCY	3 cut(s)	428, 742, 1641
RruI	TCGCGA	1 cut(s)	801
RseI	CAYNNNNRTG	1 cut(s)	308
SaqAI	TTAA	5 cut(s)	579, 897, 2063, 2142, 2194
SatI	GCNGC	7 cut(s)	78, 338, 462, 528, 634, 1439, 1546
Sau3AI	GATC	5 cut(s)	428, 653, 742, 1641, 1995
Sau96I	GGNCC	3 cut(s)	45, 1099, 1100
SchI	GAGTC	1 cut(s)	133
ScrFI	CCNGG	3 cut(s)	294, 962, 980
SduI	GDGCHC	3 cut(s)	317, 1103, 1564
SfaNI	GCATC	2 cut(s)	934, 1112
SfuI	TTCGAA	1 cut(s)	1014
SmiI	ATTTAAAT	1 cut(s)	2143
SmiMI	CAYNNNNRTG	1 cut(s)	308
SmlI	CTYRAG	4 cut(s)	216, 1645, 1985, 2101
SmoI	CTYRAG	4 cut(s)	216, 1645, 1985, 2101
SseBI	AGGCCT	1 cut(s)	1527
SsiI	CCGC	3 cut(s)	235, 338, 426
SspMI	CTAG	4 cut(s)	545, 1250, 1386, 2001
StuI	AGGCCT	1 cut(s)	1527
StyD4I	CCNGG	3 cut(s)	292, 960, 978
StyI	CCWWGG	4 cut(s)	48, 515, 1385, 1857
SwaI	ATTTAAAT	1 cut(s)	2143
TaaI	ACNGT	9 cut(s)	20, 361, 506, 908, 999, 1820, 1948, 2032, 2114
TaiI	ACGT	1 cut(s)	1038
TaqI	TCGA	4 cut(s)	612, 1014, 1803, 2147
TatI	WGTACW	8 cut(s)	501, 1046, 1259, 1371, 1689, 1815, 1965, 2177
TauI	GCSGC	1 cut(s)	340
TfiI	GAWTC	2 cut(s)	683, 1835
Tru1I	TTAA	5 cut(s)	579, 897, 2063, 2142, 2194
Tru9I	TTAA	5 cut(s)	579, 897, 2063, 2142, 2194
TseFI	GTSAC	3 cut(s)	519, 701, 1878
TseI	GCWGC	6 cut(s)	77, 461, 527, 633, 1438, 1545
Tsp45I	GTSAC	3 cut(s)	519, 701, 1878
TspDTI	ATGAA	7 cut(s)	681, 860, 981, 1067, 1648, 1789, 1884
TspGWI	ACGGA	2 cut(s)	24, 1641
Van91I	CCANNNNNTGG	2 cut(s)	140, 1474
VneI	GTGCAC	1 cut(s)	313
XapI	RAATTY	5 cut(s)	1009, 1073, 1907, 2043, 2183
XceI	RCATGY	1 cut(s)	444
XmaJI	CCTAGG	1 cut(s)	1385
XmiI	GTMKAC	1 cut(s)	903
XmnI	GAANNNNTTC	1 cut(s)	1394
XspI	CTAG	4 cut(s)	545, 1250, 1386, 2001

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.