pycom10g08310

Cinnamyl alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
10828990 .. 10832700
3711 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g08310.3

Sequence Viewer

Length: 1068 bp
ATGGGCAACCCAGAAGTGGAGAGAACAACCACAGGATGGGCTGCAAGAGACGCATCTGGCATTCTCTCACCCTATACCTACACTATTAGAAACACAGGCCCAGAAGATGTTTACATCAAAGTCCTATTCTGTGGAGTTTGCCACACTGATTCGCACCAGGCAAAAAATCAACTTGGCATGTCACACTATCCCCTGGTTCCTGGGCATGAAGTGGTTGGTAAGGTGGTGGAGGCTGGATCAGATGTGACCAAGTTCAGAGTAGGAGATGTGGTAGGAGTTGGCCTCGTTGTTGGTTGCTGCAGAAACTGCAACCCTTGCAACACAGACAATGAGCAATACTGCAACAAGAAAATCTGGACATACGCTGACGTTTACACCGATGGCAAACCCACCCAAGGCGGCTTTTCCGGTGCCATGGTGGTTGACCAAAAGTTTGTCGTGAAGGTACCGGAGGGCATGGTGCCAGAACAGGCGGCGCCGCTGCTTTGCGCGGGGGTGACGGTGTACAGCCCGCTGAGGCACTTTGGCCTGAATGTGGGTGGGTTAAAAGGAGGAATACTTGGACTTGGAGGTGTAGGACACATGGGAGTGAAGATAGCCAAAGCCATGGGGCACCATGTGACTGTGATAAGCTCTTCAGAAAAGAAGAGAGAGGAGGCTTTGGAGCATATTGGGGCCGACGAGTACTTGATCAGCTCAGATGCCACAAAAATGCAGGAGGCTGCTGACTCCTTGGATTACATCATTGACACAGTGCCCGTCGGCCACCCACTCGAGCCGTACCTCTCTTTGTTGAAGCTTGATGGCAAATTGATCTTGATGGGTGCTATTAACACCCCATTACAATTTCTTTCCCCAATGGTCATGCTTGGGAGGAAGACGATCACAGGGAGCTTTGTTGGGAGCATGAAGGAAACAGAGGAGGTGCTTCAGTTCTGCAAAGAGAGAGGATTGACAACTATGATCGAAGTGGTTAAGATGGACTACATAAACACAGCTTTCGAGAGGTTGGAGAAAAACGACGTTAGGTACAGGTTCGTCGTCGATGTGGCCGGTAGCAATCTTTGA

Protein Analysis

356

Amino Acids

38.48

Weight (kDa)

5.95

Isoelectric Point (pI)

26.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 445
AccB1I GGYRCC 5 cut(s) 410, 445, 460, 475, 612
AccB7I CCANNNNNTGG 1 cut(s) 36
AccII CGCG 1 cut(s) 491
AciI CCGC 5 cut(s) 399, 473, 479, 491, 512
AclWI GGATC 1 cut(s) 244
AcoI YGGCCR 2 cut(s) 763, 1050
AcuI CTGAAG 2 cut(s) 621, 914
AcyI GRCGYC 1 cut(s) 476
AdeI CACNNNGTG 1 cut(s) 619
AfaI GTAC 5 cut(s) 447, 506, 686, 782, 1031
AfiI CCNNNNNNNGG 4 cut(s) 16, 36, 395, 535
AgsI TTSAA 1 cut(s) 796
AjnI CCWGG 3 cut(s) 156, 192, 199
AluBI AGCT 5 cut(s) 633, 696, 799, 894, 998
AluI AGCT 5 cut(s) 633, 696, 799, 894, 998
Alw26I GTCTC 1 cut(s) 42
AlwI GGATC 1 cut(s) 244
AlwNI CAGNNNCTG 1 cut(s) 306
Ama87I CYCGRG 1 cut(s) 773
AoxI GGCC 6 cut(s) 97, 280, 526, 675, 763, 1050
ApeKI GCWGC 4 cut(s) 41, 297, 481, 722
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
Asp718I GGTACC 1 cut(s) 445
AspLEI GCGC 2 cut(s) 478, 491
AspS9I GGNCC 2 cut(s) 98, 675
AsuHPI GGTGA 2 cut(s) 60, 508
AvaI CYCGRG 1 cut(s) 773
BaeGI GKGCMC 2 cut(s) 615, 759
BanI GGYRCC 5 cut(s) 410, 445, 460, 475, 612
BbsI GAAGAC 1 cut(s) 884
BbvCI CCTCAGC 1 cut(s) 515
BbvI GCAGC 4 cut(s) 28, 284, 468, 709
BccI CCATC 5 cut(s) 30, 374, 797, 814, 973
BceAI ACGGC 1 cut(s) 763
BciT130I CCWGG 3 cut(s) 158, 194, 201
BclI TGATCA 1 cut(s) 690
BcoDI GTCTC 1 cut(s) 42
BfmI CTRYAG 1 cut(s) 298
BfoI RGCGCY 1 cut(s) 479
BisI GCNGC 7 cut(s) 42, 298, 400, 474, 479, 482, 723
BlsI GCNGC 7 cut(s) 43, 299, 401, 475, 480, 483, 724
BmcAI AGTACT 1 cut(s) 686
Bme1390I CCNGG 3 cut(s) 158, 194, 201
BmeT110I CYCGRG 1 cut(s) 773
BmgT120I GGNCC 2 cut(s) 98, 675
BmiI GGNNCC 7 cut(s) 198, 412, 447, 462, 477, 614, 676
BmrFI CCNGG 3 cut(s) 158, 194, 201
BmsI GCATC 2 cut(s) 62, 691
BpiI GAAGAC 1 cut(s) 884
BplI GAGNNNNNCTC 2 cut(s) 267, 299
Bpu10I CCTNAGC 1 cut(s) 515
BsaHI GRCGYC 1 cut(s) 476
BsaJI CCNNGG 6 cut(s) 192, 200, 394, 414, 606, 732
BsaWI WCCGGW 2 cut(s) 407, 448
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 4 cut(s) 16, 36, 395, 535
Bse118I RCCGGY 1 cut(s) 1052
BseBI CCWGG 3 cut(s) 158, 194, 201
BseDI CCNNGG 6 cut(s) 192, 200, 394, 414, 606, 732
BseGI GGATG 1 cut(s) 41
BseLI CCNNNNNNNGG 4 cut(s) 16, 36, 395, 535
BseMII CTCAG 2 cut(s) 506, 711
BseRI GAGGAG 2 cut(s) 668, 935
BseSI GKGCMC 2 cut(s) 615, 759
BseXI GCAGC 4 cut(s) 28, 284, 468, 709
Bsh1236I CGCG 1 cut(s) 491
BshFI GGCC 6 cut(s) 99, 282, 528, 677, 765, 1052
BshNI GGYRCC 5 cut(s) 410, 445, 460, 475, 612
BsiHKCI CYCGRG 1 cut(s) 773
BsiSI CCGG 3 cut(s) 408, 449, 1053
BslI CCNNNNNNNGG 4 cut(s) 16, 36, 395, 535
BsmAI GTCTC 1 cut(s) 42
BsmBI CGTCTC 1 cut(s) 42
BsmI GAATGC 1 cut(s) 60
BsnI GGCC 6 cut(s) 99, 282, 528, 677, 765, 1052
BsoBI CYCGRG 1 cut(s) 773
Bsp1286I GDGCHC 2 cut(s) 615, 759
Bsp1407I TGTACA 1 cut(s) 504
Bsp143I GATC 5 cut(s) 236, 690, 813, 882, 963
Bsp19I CCATGG 2 cut(s) 414, 606
BspACI CCGC 5 cut(s) 399, 473, 479, 491, 512
BspANI GGCC 6 cut(s) 99, 282, 528, 677, 765, 1052
BspCNI CTCAG 2 cut(s) 507, 710
BspFNI CGCG 1 cut(s) 491
BspLI GGNNCC 7 cut(s) 198, 412, 447, 462, 477, 614, 676
BspMAI CTGCAG 1 cut(s) 302
BspPI GGATC 1 cut(s) 244
BspQI GCTCTTC 1 cut(s) 640
BspT107I GGYRCC 5 cut(s) 410, 445, 460, 475, 612
BsrFI RCCGGY 1 cut(s) 1052
BsrGI TGTACA 1 cut(s) 504
BssAI RCCGGY 1 cut(s) 1052
BssECI CCNNGG 6 cut(s) 192, 200, 394, 414, 606, 732
BssMI GATC 5 cut(s) 236, 690, 813, 882, 963
BssNI GRCGYC 1 cut(s) 476
BssT1I CCWWGG 4 cut(s) 394, 414, 606, 732
Bst2UI CCWGG 3 cut(s) 158, 194, 201
Bst4CI ACNGT 3 cut(s) 502, 625, 754
Bst6I CTCTTC 2 cut(s) 640, 641
BstACI GRCGYC 1 cut(s) 476
BstAPI GCANNNNNTGC 2 cut(s) 306, 315
BstAUI TGTACA 1 cut(s) 504
BstC8I GCNNGC 1 cut(s) 512
BstDEI CTNAG 2 cut(s) 515, 697
BstDSI CCRYGG 2 cut(s) 414, 606
BstF5I GGATG 1 cut(s) 41
BstFNI CGCG 1 cut(s) 491
BstH2I RGCGCY 1 cut(s) 479
BstHHI GCGC 2 cut(s) 478, 491
BstKTI GATC 5 cut(s) 239, 693, 816, 885, 966
BstMAI GTCTC 1 cut(s) 42
BstMBI GATC 5 cut(s) 236, 690, 813, 882, 963
BstMWI GCNNNNNNNGC 3 cut(s) 50, 306, 315
BstNI CCWGG 3 cut(s) 158, 194, 201
BstNSI RCATGY 1 cut(s) 181
BstSCI CCNGG 3 cut(s) 156, 192, 199
BstSFI CTRYAG 1 cut(s) 298
BstSLI GKGCMC 2 cut(s) 615, 759
BstUI CGCG 1 cut(s) 491
BstV1I GCAGC 4 cut(s) 28, 284, 468, 709
BstV2I GAAGAC 1 cut(s) 884
BstXI CCANNNNNNTGG 1 cut(s) 607
BsuRI GGCC 6 cut(s) 99, 282, 528, 677, 765, 1052
BtgI CCRYGG 2 cut(s) 414, 606
BtsCI GGATG 1 cut(s) 41
BtsIMutI CAGTG 2 cut(s) 144, 759
Cac8I GCNNGC 1 cut(s) 512
CaiI CAGNNNCTG 1 cut(s) 306
CfoI GCGC 2 cut(s) 478, 491
Cfr10I RCCGGY 1 cut(s) 1052
Cfr13I GGNCC 2 cut(s) 98, 675
CseI GACGC 1 cut(s) 59
Csp6I GTAC 5 cut(s) 446, 505, 685, 781, 1030
CviAII CATG 9 cut(s) 178, 206, 415, 457, 583, 607, 617, 865, 907
CviQI GTAC 5 cut(s) 446, 505, 685, 781, 1030
DdeI CTNAG 2 cut(s) 515, 697
DinI GGCGCC 1 cut(s) 477
DpnI GATC 5 cut(s) 238, 692, 815, 884, 965
DpnII GATC 5 cut(s) 236, 690, 813, 882, 963
DraIII CACNNNGTG 1 cut(s) 619
EaeI YGGCCR 2 cut(s) 763, 1050
Eam1104I CTCTTC 2 cut(s) 640, 641
EarI CTCTTC 2 cut(s) 640, 641
Eco130I CCWWGG 4 cut(s) 394, 414, 606, 732
Eco57I CTGAAG 2 cut(s) 621, 914
Eco88I CYCGRG 1 cut(s) 773
EcoRII CCWGG 3 cut(s) 156, 192, 199
EcoT14I CCWWGG 4 cut(s) 394, 414, 606, 732
EgeI GGCGCC 1 cut(s) 477
EheI GGCGCC 1 cut(s) 477
ErhI CCWWGG 4 cut(s) 394, 414, 606, 732
Esp3I CGTCTC 1 cut(s) 42
FaeI CATG 9 cut(s) 181, 209, 418, 460, 586, 610, 620, 868, 910
FatI CATG 9 cut(s) 177, 205, 414, 456, 582, 606, 616, 864, 906
FauI CCCGC 2 cut(s) 484, 519
FbaI TGATCA 1 cut(s) 690
Fnu4HI GCNGC 7 cut(s) 42, 298, 400, 474, 479, 482, 723
FokI GGATG 1 cut(s) 48
Fsp4HI GCNGC 7 cut(s) 42, 298, 400, 474, 479, 482, 723
GlaI GCGC 2 cut(s) 477, 490
GluI GCNGC 7 cut(s) 42, 298, 400, 474, 479, 482, 723
HaeII RGCGCY 1 cut(s) 479
HaeIII GGCC 6 cut(s) 99, 282, 528, 677, 765, 1052
HapII CCGG 3 cut(s) 408, 449, 1053
HgaI GACGC 1 cut(s) 59
HhaI GCGC 2 cut(s) 478, 491
Hin1I GRCGYC 1 cut(s) 476
Hin1II CATG 9 cut(s) 181, 209, 418, 460, 586, 610, 620, 868, 910
Hin6I GCGC 2 cut(s) 476, 489
HinP1I GCGC 2 cut(s) 476, 489
HincII GTYRAC 1 cut(s) 424
HindII GTYRAC 1 cut(s) 424
HindIII AAGCTT 1 cut(s) 797
HinfI GANTC 2 cut(s) 149, 728
HpaII CCGG 3 cut(s) 408, 449, 1053
HphI GGTGA 2 cut(s) 60, 508
Hpy166II GTNNAC 4 cut(s) 112, 373, 424, 505
Hpy188I TCNGA 4 cut(s) 241, 257, 640, 700
Hpy188III TCNNGA 4 cut(s) 355, 439, 817, 1003
Hpy8I GTNNAC 4 cut(s) 112, 373, 424, 505
Hpy99I CGWCG 5 cut(s) 683, 764, 1025, 1043, 1046
HpyAV CCTTC 2 cut(s) 436, 904
HpyCH4III ACNGT 3 cut(s) 502, 625, 754
HpyCH4IV ACGT 2 cut(s) 369, 1023
HpyCH4V TGCA 7 cut(s) 44, 300, 309, 318, 342, 715, 939
HpyF10VI GCNNNNNNNGC 3 cut(s) 50, 306, 315
HpyF3I CTNAG 2 cut(s) 515, 697
HpySE526I ACGT 2 cut(s) 369, 1023
Hsp92I GRCGYC 1 cut(s) 476
Hsp92II CATG 9 cut(s) 181, 209, 418, 460, 586, 610, 620, 868, 910
HspAI GCGC 2 cut(s) 476, 489
KasI GGCGCC 1 cut(s) 475
KpnI GGTACC 1 cut(s) 449
Ksp22I TGATCA 1 cut(s) 690
Kzo9I GATC 5 cut(s) 236, 690, 813, 882, 963
LguI GCTCTTC 1 cut(s) 640
LmnI GCTCC 3 cut(s) 664, 891, 903
Lsp1109I GCAGC 4 cut(s) 28, 284, 468, 709
LweI GCATC 2 cut(s) 62, 691
MaeII ACGT 2 cut(s) 369, 1023
MaeIII GTNAC 4 cut(s) 180, 244, 496, 619
MalI GATC 5 cut(s) 238, 692, 815, 884, 965
MboI GATC 5 cut(s) 236, 690, 813, 882, 963
MboII GAAGA 5 cut(s) 116, 604, 627, 658, 889
MhlI GDGCHC 2 cut(s) 615, 759
MluCI AATT 2 cut(s) 809, 845
Mly113I GGCGCC 1 cut(s) 476
MlyI GAGTC 1 cut(s) 722
MmeI TCCRAC 1 cut(s) 990
MseI TTAA 3 cut(s) 545, 831, 975
MslI CAYNNNNRTG 2 cut(s) 587, 710
MspA1I CMGCKG 2 cut(s) 481, 514
MspI CCGG 3 cut(s) 408, 449, 1053
MspR9I CCNGG 3 cut(s) 158, 194, 201
Mva1269I GAATGC 1 cut(s) 60
MvaI CCWGG 3 cut(s) 158, 194, 201
MvnI CGCG 1 cut(s) 491
MwoI GCNNNNNNNGC 3 cut(s) 50, 306, 315
NarI GGCGCC 1 cut(s) 476
NcoI CCATGG 2 cut(s) 414, 606
NdeII GATC 5 cut(s) 236, 690, 813, 882, 963
NlaIII CATG 9 cut(s) 181, 209, 418, 460, 586, 610, 620, 868, 910
NlaIV GGNNCC 7 cut(s) 198, 412, 447, 462, 477, 614, 676
NmuCI GTSAC 4 cut(s) 180, 244, 496, 619
NspI RCATGY 1 cut(s) 181
PaeR7I CTCGAG 1 cut(s) 773
PciSI GCTCTTC 1 cut(s) 640
PcsI WCGNNNNNNNCGW 1 cut(s) 375
PctI GAATGC 1 cut(s) 60
PfeI GAWTC 1 cut(s) 149
PflMI CCANNNNNTGG 1 cut(s) 36
PkrI GCNGC 7 cut(s) 43, 299, 401, 475, 480, 483, 724
PleI GAGTC 1 cut(s) 722
PluTI GGCGCC 1 cut(s) 479
PpsI GAGTC 1 cut(s) 722
Psp6I CCWGG 3 cut(s) 156, 192, 199
PspGI CCWGG 3 cut(s) 156, 192, 199
PspN4I GGNNCC 7 cut(s) 198, 412, 447, 462, 477, 614, 676
PspPI GGNCC 2 cut(s) 98, 675
PspXI VCTCGAGB 1 cut(s) 773
PstI CTGCAG 1 cut(s) 302
PstNI CAGNNNCTG 1 cut(s) 306
RsaI GTAC 5 cut(s) 447, 506, 686, 782, 1031
RsaNI GTAC 5 cut(s) 446, 505, 685, 781, 1030
RseI CAYNNNNRTG 2 cut(s) 587, 710
SapI GCTCTTC 1 cut(s) 640
SaqAI TTAA 3 cut(s) 545, 831, 975
SatI GCNGC 7 cut(s) 42, 298, 400, 474, 479, 482, 723
Sau3AI GATC 5 cut(s) 236, 690, 813, 882, 963
Sau96I GGNCC 2 cut(s) 98, 675
ScaI AGTACT 1 cut(s) 686
SchI GAGTC 1 cut(s) 722
ScrFI CCNGG 3 cut(s) 158, 194, 201
SduI GDGCHC 2 cut(s) 615, 759
SfaNI GCATC 2 cut(s) 62, 691
SfcI CTRYAG 1 cut(s) 298
SfoI GGCGCC 1 cut(s) 477
Sfr274I CTCGAG 1 cut(s) 773
SlaI CTCGAG 1 cut(s) 773
SmiMI CAYNNNNRTG 2 cut(s) 587, 710
SmlI CTYRAG 1 cut(s) 773
SmoI CTYRAG 1 cut(s) 773
Sse9I AATT 2 cut(s) 809, 845
SsiI CCGC 5 cut(s) 399, 473, 479, 491, 512
SspDI GGCGCC 1 cut(s) 475
StyD4I CCNGG 3 cut(s) 156, 192, 199
StyI CCWWGG 4 cut(s) 394, 414, 606, 732
TaaI ACNGT 3 cut(s) 502, 625, 754
TaiI ACGT 2 cut(s) 372, 1026
TaqI TCGA 4 cut(s) 774, 966, 1002, 1044
TasI AATT 2 cut(s) 809, 845
TatI WGTACW 2 cut(s) 504, 684
TauI GCSGC 3 cut(s) 402, 476, 481
TfiI GAWTC 1 cut(s) 149
Tru1I TTAA 3 cut(s) 545, 831, 975
Tru9I TTAA 3 cut(s) 545, 831, 975
TscAI CASTG 2 cut(s) 151, 759
TseFI GTSAC 4 cut(s) 180, 244, 496, 619
TseI GCWGC 4 cut(s) 41, 297, 481, 722
Tsp45I GTSAC 4 cut(s) 180, 244, 496, 619
TspDTI ATGAA 2 cut(s) 222, 923
TspRI CASTG 2 cut(s) 151, 759
Van91I CCANNNNNTGG 1 cut(s) 36
XceI RCATGY 1 cut(s) 181
XhoI CTCGAG 1 cut(s) 773
ZrmI AGTACT 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.