pycom10g08320

Cinnamyl alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
10847669 .. 10849742
2074 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g08320.5

Sequence Viewer

Length: 1206 bp
ATGTTTCCCAAAGCCAAAACCCACTTACCCAATACTCTCACCAACTCATCCTCTCCCTTCCTCCCACACCACCACCACTTATTTTCTCCTCCCTCTCTCTCGCTCCCTCTCCCCAAAACACATTCAGAAGGAAAAATGGTCAGCCTTGAAGTGGAGAGAAAGACTACAGGATGGGCTGCAAGAGACTCATCTGGAATACTCTCACCCTACACCTACAATATTAGGAACACAGGGCCAGAGGACGTTTACGTCAAGGTTCTATGCTGTGGAGTTTGCCACTCGGATCTTCACCAGATCAAAAATGACCTTGGCATGTCAAACTATCCCATGGTTCCCGGGCATGAGGTGGTTGGTGAGGTGGTGGAGGTGGGATCAGATGTGACAAAGTTCAGAGCAGGAGACGTGGTTGGAGTTGGCCTCCTTGTTGGTTGCTGCAGAAACTGCAGCCCATGCAAAACGGACAACGAGCAGTACTGCAACAAGAAAATCTGGTCTTACAACGACACTTACACCGACGGCAAAACCACCCAAGGCGGCTTTGCCGGTGCCCTCGTCGCTGATCAAAAGTTTGTGGTGAAGATACCGGAGGGAATGGTGCCGGAACAGGCGGCGCCGCTGCTGTGCGCCGGGGTGACAGTATACAGCCCGCTGAGGCACTTCGGCCTGAATGTGAGTGGGTTAACAGGAGGAATATTAGGGCTTGGAGGTGTGGGACACATGGGGGTGAAGATAGCCAAGGCCATGGGACACCATGTGACTTTGATAAGCTCATCAGATAAGAAAAGAGAGGAGGCTTTGGAGCATGTCGGGGCTGATGCTTTCTTGGTCAGCTCAGATGCCACAAAAATGCAGGAGGCTGCGGATTCATTGGATTACATCATTGACACAGTGCCTGTTGGCCACCCACTTGAGCCTTACCTCTCTTTGTTGAAGCTTGATGGGAAATTGATCTTGATGGGTGTTATTAACACCCCATTACAATTTGTCTCGCCAATGGTCATGCTTGGGAGGAAGAAAATCACCGGGAGCTTTGTGGGAAGCATGAAGGAAACTGAGGAGATGCTTGAATTTTGCAAAGAGAAAGGATTAACATCAATGATTGAAGTGGTTAAGATGGATTACGTCAACACAGCGTTTGAGAGGTTGGAGAAGAACGATGTTAGGTACAGGTTCGTCGTCGATGTGGCCGGCAGCAATCTTATTTAA

Protein Analysis

402

Amino Acids

43.54

Weight (kDa)

6.43

Isoelectric Point (pI)

31.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 248
AccB1I GGYRCC 3 cut(s) 545, 595, 610
AccI GTMKAC 1 cut(s) 639
AciI CCGC 5 cut(s) 534, 608, 614, 647, 860
AclWI GGATC 2 cut(s) 291, 379
AcoI YGGCCR 2 cut(s) 898, 1185
AcsI RAATTY 1 cut(s) 1067
AcyI GRCGYC 1 cut(s) 611
AdeI CACNNNGTG 1 cut(s) 754
AfaI GTAC 2 cut(s) 473, 1166
AfiI CCNNNNNNNGG 1 cut(s) 151
AgsI TTSAA 4 cut(s) 149, 931, 1067, 1103
AjiI CACGTC 1 cut(s) 403
AluBI AGCT 4 cut(s) 768, 831, 934, 1029
AluI AGCT 4 cut(s) 768, 831, 934, 1029
Alw26I GTCTC 3 cut(s) 177, 393, 991
AlwI GGATC 2 cut(s) 291, 379
AlwNI CAGNNNCTG 2 cut(s) 441, 893
Ama87I CYCGRG 1 cut(s) 335
AoxI GGCC 6 cut(s) 233, 415, 661, 738, 898, 1185
ApeKI GCWGC 6 cut(s) 176, 432, 444, 616, 857, 1191
ApoI RAATTY 1 cut(s) 1067
AspLEI GCGC 2 cut(s) 613, 626
AspS9I GGNCC 1 cut(s) 233
AsuC2I CCSGG 4 cut(s) 336, 337, 628, 1024
AsuHPI GGTGA 8 cut(s) 31, 195, 281, 365, 586, 643, 736, 1012
AvaI CYCGRG 1 cut(s) 335
BaeGI GKGCMC 1 cut(s) 550
BalI TGGCCA 1 cut(s) 900
BanI GGYRCC 3 cut(s) 545, 595, 610
BbvCI CCTCAGC 1 cut(s) 650
BbvI GCAGC 5 cut(s) 163, 419, 456, 603, 844
BccI CCATC 4 cut(s) 165, 932, 949, 1108
BceAI ACGGC 1 cut(s) 532
BclI TGATCA 1 cut(s) 559
BcnI CCSGG 4 cut(s) 336, 337, 628, 1024
BcoDI GTCTC 3 cut(s) 177, 393, 991
BfmI CTRYAG 3 cut(s) 165, 433, 442
BfoI RGCGCY 1 cut(s) 614
BisI GCNGC 9 cut(s) 177, 433, 445, 535, 609, 614, 617, 858, 1192
BlsI GCNGC 9 cut(s) 178, 434, 446, 536, 610, 615, 618, 859, 1193
BmcAI AGTACT 1 cut(s) 473
Bme1390I CCNGG 4 cut(s) 336, 337, 628, 1024
BmeT110I CYCGRG 1 cut(s) 335
BmgBI CACGTC 1 cut(s) 403
BmgT120I GGNCC 1 cut(s) 233
BmiI GGNNCC 4 cut(s) 333, 547, 597, 612
BmrFI CCNGG 4 cut(s) 336, 337, 628, 1024
BmsI GCATC 3 cut(s) 805, 826, 1050
BplI GAGNNNNNCTC 2 cut(s) 402, 434
Bpu10I CCTNAGC 1 cut(s) 650
BpuEI CTTGAG 1 cut(s) 929
BpuMI CCSGG 4 cut(s) 336, 337, 628, 1024
BsaBI GATNNNNATC 1 cut(s) 1090
BsaHI GRCGYC 1 cut(s) 611
BsaJI CCNNGG 7 cut(s) 307, 327, 335, 529, 627, 735, 741
BsaWI WCCGGW 1 cut(s) 583
BsaXI ACNNNNNCTCC 2 cut(s) 390, 420
Bsc4I CCNNNNNNNGG 1 cut(s) 151
Bse118I RCCGGY 2 cut(s) 542, 1187
Bse8I GATNNNNATC 1 cut(s) 1090
BseDI CCNNGG 7 cut(s) 307, 327, 335, 529, 627, 735, 741
BseGI GGATG 2 cut(s) 47, 176
BseJI GATNNNNATC 1 cut(s) 1090
BseLI CCNNNNNNNGG 1 cut(s) 151
BseMII CTCAG 3 cut(s) 641, 846, 1044
BseRI GAGGAG 3 cut(s) 78, 803, 1070
BseSI GKGCMC 1 cut(s) 550
BseXI GCAGC 5 cut(s) 163, 419, 456, 603, 844
BshFI GGCC 6 cut(s) 235, 417, 663, 740, 900, 1187
BshNI GGYRCC 3 cut(s) 545, 595, 610
BsiHKCI CYCGRG 1 cut(s) 335
BsiSI CCGG 7 cut(s) 336, 543, 584, 599, 627, 1023, 1188
BslFI GGGAC 2 cut(s) 726, 759
BslI CCNNNNNNNGG 1 cut(s) 151
BsmAI GTCTC 3 cut(s) 177, 393, 991
BsmBI CGTCTC 1 cut(s) 393
BsmFI GGGAC 2 cut(s) 726, 759
BsnI GGCC 6 cut(s) 235, 417, 663, 740, 900, 1187
BsoBI CYCGRG 1 cut(s) 335
Bsp1286I GDGCHC 1 cut(s) 550
Bsp143I GATC 5 cut(s) 283, 294, 371, 559, 948
Bsp19I CCATGG 2 cut(s) 327, 741
BspACI CCGC 5 cut(s) 534, 608, 614, 647, 860
BspANI GGCC 6 cut(s) 235, 417, 663, 740, 900, 1187
BspCNI CTCAG 3 cut(s) 642, 845, 1045
BspLI GGNNCC 4 cut(s) 333, 547, 597, 612
BspMAI CTGCAG 2 cut(s) 437, 446
BspPI GGATC 2 cut(s) 291, 379
BspT107I GGYRCC 3 cut(s) 545, 595, 610
BsrFI RCCGGY 2 cut(s) 542, 1187
BssAI RCCGGY 2 cut(s) 542, 1187
BssECI CCNNGG 7 cut(s) 307, 327, 335, 529, 627, 735, 741
BssMI GATC 5 cut(s) 283, 294, 371, 559, 948
BssNAI GTATAC 1 cut(s) 640
BssNI GRCGYC 1 cut(s) 611
BssT1I CCWWGG 5 cut(s) 307, 327, 529, 735, 741
Bst1107I GTATAC 1 cut(s) 640
Bst4CI ACNGT 2 cut(s) 637, 889
BstACI GRCGYC 1 cut(s) 611
BstAPI GCANNNNNTGC 2 cut(s) 441, 450
BstC8I GCNNGC 2 cut(s) 647, 1189
BstDEI CTNAG 3 cut(s) 650, 832, 1053
BstDSI CCRYGG 2 cut(s) 327, 741
BstF5I GGATG 2 cut(s) 47, 176
BstH2I RGCGCY 1 cut(s) 614
BstHHI GCGC 2 cut(s) 613, 626
BstKTI GATC 5 cut(s) 286, 297, 374, 562, 951
BstMAI GTCTC 3 cut(s) 177, 393, 991
BstMBI GATC 5 cut(s) 283, 294, 371, 559, 948
BstMWI GCNNNNNNNGC 3 cut(s) 441, 450, 554
BstNSI RCATGY 2 cut(s) 316, 806
BstSCI CCNGG 4 cut(s) 334, 335, 626, 1022
BstSFI CTRYAG 3 cut(s) 165, 433, 442
BstSLI GKGCMC 1 cut(s) 550
BstV1I GCAGC 5 cut(s) 163, 419, 456, 603, 844
BstX2I RGATCY 1 cut(s) 283
BstXI CCANNNNNNTGG 1 cut(s) 742
BstYI RGATCY 1 cut(s) 283
BstZ17I GTATAC 1 cut(s) 640
BsuRI GGCC 6 cut(s) 235, 417, 663, 740, 900, 1187
BtgI CCRYGG 2 cut(s) 327, 741
BtrI CACGTC 1 cut(s) 403
BtsCI GGATG 2 cut(s) 47, 176
BtsIMutI CAGTG 1 cut(s) 894
Cac8I GCNNGC 2 cut(s) 647, 1189
CaiI CAGNNNCTG 2 cut(s) 441, 893
CfoI GCGC 2 cut(s) 613, 626
Cfr10I RCCGGY 2 cut(s) 542, 1187
Cfr13I GGNCC 1 cut(s) 233
Cfr9I CCCGGG 1 cut(s) 335
Csp6I GTAC 2 cut(s) 472, 1165
CviQI GTAC 2 cut(s) 472, 1165
DdeI CTNAG 3 cut(s) 650, 832, 1053
DinI GGCGCC 1 cut(s) 612
DpnI GATC 5 cut(s) 285, 296, 373, 561, 950
DpnII GATC 5 cut(s) 283, 294, 371, 559, 948
DraIII CACNNNGTG 1 cut(s) 754
DrdI GACNNNNNNGTC 1 cut(s) 248
DseDI GACNNNNNNGTC 1 cut(s) 248
EaeI YGGCCR 2 cut(s) 898, 1185
Eco130I CCWWGG 5 cut(s) 307, 327, 529, 735, 741
Eco88I CYCGRG 1 cut(s) 335
EcoT14I CCWWGG 5 cut(s) 307, 327, 529, 735, 741
EgeI GGCGCC 1 cut(s) 612
EheI GGCGCC 1 cut(s) 612
ErhI CCWWGG 5 cut(s) 307, 327, 529, 735, 741
Esp3I CGTCTC 1 cut(s) 393
FaqI GGGAC 2 cut(s) 726, 759
FauI CCCGC 1 cut(s) 654
FbaI TGATCA 1 cut(s) 559
FblI GTMKAC 1 cut(s) 639
Fnu4HI GCNGC 9 cut(s) 177, 433, 445, 535, 609, 614, 617, 858, 1192
FokI GGATG 2 cut(s) 34, 183
Fsp4HI GCNGC 9 cut(s) 177, 433, 445, 535, 609, 614, 617, 858, 1192
GlaI GCGC 2 cut(s) 612, 625
GluI GCNGC 9 cut(s) 177, 433, 445, 535, 609, 614, 617, 858, 1192
HaeII RGCGCY 1 cut(s) 614
HaeIII GGCC 6 cut(s) 235, 417, 663, 740, 900, 1187
HapII CCGG 7 cut(s) 336, 543, 584, 599, 627, 1023, 1188
HhaI GCGC 2 cut(s) 613, 626
Hin1I GRCGYC 1 cut(s) 611
Hin6I GCGC 2 cut(s) 611, 624
HinP1I GCGC 2 cut(s) 611, 624
HincII GTYRAC 2 cut(s) 681, 1126
HindII GTYRAC 2 cut(s) 681, 1126
HindIII AAGCTT 1 cut(s) 932
HinfI GANTC 2 cut(s) 185, 863
HpaI GTTAAC 1 cut(s) 681
HpaII CCGG 7 cut(s) 336, 543, 584, 599, 627, 1023, 1188
HphI GGTGA 8 cut(s) 31, 195, 281, 365, 586, 643, 736, 1012
Hpy166II GTNNAC 4 cut(s) 247, 640, 681, 1126
Hpy188I TCNGA 6 cut(s) 127, 283, 376, 392, 775, 835
Hpy188III TCNNGA 2 cut(s) 192, 952
Hpy8I GTNNAC 4 cut(s) 247, 640, 681, 1126
Hpy99I CGWCG 4 cut(s) 518, 557, 1178, 1181
HpyAV CCTTC 3 cut(s) 67, 122, 1039
HpyCH4III ACNGT 2 cut(s) 637, 889
HpyCH4IV ACGT 4 cut(s) 243, 249, 402, 1122
HpyCH4V TGCA 7 cut(s) 179, 435, 444, 453, 477, 850, 1074
HpyF10VI GCNNNNNNNGC 3 cut(s) 441, 450, 554
HpyF3I CTNAG 3 cut(s) 650, 832, 1053
HpySE526I ACGT 4 cut(s) 243, 249, 402, 1122
Hsp92I GRCGYC 1 cut(s) 611
HspAI GCGC 2 cut(s) 611, 624
KasI GGCGCC 1 cut(s) 610
KroI GCCGGC 1 cut(s) 1187
KroNI GCCGGC 1 cut(s) 1189
Ksp22I TGATCA 1 cut(s) 559
KspAI GTTAAC 1 cut(s) 681
Kzo9I GATC 5 cut(s) 283, 294, 371, 559, 948
LmnI GCTCC 3 cut(s) 108, 799, 1026
Lsp1109I GCAGC 5 cut(s) 163, 419, 456, 603, 844
LweI GCATC 3 cut(s) 805, 826, 1050
MaeII ACGT 4 cut(s) 243, 249, 402, 1122
MaeIII GTNAC 3 cut(s) 379, 631, 754
MalI GATC 5 cut(s) 285, 296, 373, 561, 950
MboI GATC 5 cut(s) 283, 294, 371, 559, 948
MboII GAAGA 5 cut(s) 278, 589, 739, 1024, 1162
MflI RGATCY 1 cut(s) 283
MhlI GDGCHC 1 cut(s) 550
MlsI TGGCCA 1 cut(s) 900
MluCI AATT 3 cut(s) 944, 980, 1067
MluNI TGGCCA 1 cut(s) 900
Mly113I GGCGCC 1 cut(s) 611
MlyI GAGTC 1 cut(s) 179
MmeI TCCRAC 2 cut(s) 388, 1125
Mox20I TGGCCA 1 cut(s) 900
MroNI GCCGGC 1 cut(s) 1187
MscI TGGCCA 1 cut(s) 900
MseI TTAA 5 cut(s) 680, 966, 1088, 1110, 1204
MslI CAYNNNNRTG 2 cut(s) 722, 845
Msp20I TGGCCA 1 cut(s) 900
MspA1I CMGCKG 2 cut(s) 616, 649
MspI CCGG 7 cut(s) 336, 543, 584, 599, 627, 1023, 1188
MspR9I CCNGG 4 cut(s) 336, 337, 628, 1024
MwoI GCNNNNNNNGC 3 cut(s) 441, 450, 554
NaeI GCCGGC 1 cut(s) 1189
NarI GGCGCC 1 cut(s) 611
NciI CCSGG 4 cut(s) 336, 337, 628, 1024
NcoI CCATGG 2 cut(s) 327, 741
NdeII GATC 5 cut(s) 283, 294, 371, 559, 948
NgoMIV GCCGGC 1 cut(s) 1187
NlaIV GGNNCC 4 cut(s) 333, 547, 597, 612
NmuCI GTSAC 3 cut(s) 379, 631, 754
NspI RCATGY 2 cut(s) 316, 806
PdiI GCCGGC 1 cut(s) 1189
PfeI GAWTC 1 cut(s) 863
PkrI GCNGC 9 cut(s) 178, 434, 446, 536, 610, 615, 618, 859, 1193
PleI GAGTC 1 cut(s) 179
PluTI GGCGCC 1 cut(s) 614
PpsI GAGTC 1 cut(s) 179
PspN4I GGNNCC 4 cut(s) 333, 547, 597, 612
PspPI GGNCC 1 cut(s) 233
PstI CTGCAG 2 cut(s) 437, 446
PstNI CAGNNNCTG 2 cut(s) 441, 893
PsuI RGATCY 1 cut(s) 283
RsaI GTAC 2 cut(s) 473, 1166
RsaNI GTAC 2 cut(s) 472, 1165
RseI CAYNNNNRTG 2 cut(s) 722, 845
SaqAI TTAA 5 cut(s) 680, 966, 1088, 1110, 1204
SatI GCNGC 9 cut(s) 177, 433, 445, 535, 609, 614, 617, 858, 1192
Sau3AI GATC 5 cut(s) 283, 294, 371, 559, 948
Sau96I GGNCC 1 cut(s) 233
ScaI AGTACT 1 cut(s) 473
SchI GAGTC 1 cut(s) 179
ScrFI CCNGG 4 cut(s) 336, 337, 628, 1024
SduI GDGCHC 1 cut(s) 550
SfaNI GCATC 3 cut(s) 805, 826, 1050
SfcI CTRYAG 3 cut(s) 165, 433, 442
SfoI GGCGCC 1 cut(s) 612
SmaI CCCGGG 1 cut(s) 337
SmiMI CAYNNNNRTG 2 cut(s) 722, 845
SmlI CTYRAG 1 cut(s) 908
SmoI CTYRAG 1 cut(s) 908
Sse9I AATT 3 cut(s) 944, 980, 1067
SsiI CCGC 5 cut(s) 534, 608, 614, 647, 860
SspDI GGCGCC 1 cut(s) 610
SspI AATATT 2 cut(s) 220, 693
StyD4I CCNGG 4 cut(s) 334, 335, 626, 1022
StyI CCWWGG 5 cut(s) 307, 327, 529, 735, 741
TaaI ACNGT 2 cut(s) 637, 889
TaiI ACGT 4 cut(s) 246, 252, 405, 1125
TaqI TCGA 1 cut(s) 1179
TasI AATT 3 cut(s) 944, 980, 1067
TatI WGTACW 1 cut(s) 471
TauI GCSGC 3 cut(s) 537, 611, 616
TfiI GAWTC 1 cut(s) 863
Tru1I TTAA 5 cut(s) 680, 966, 1088, 1110, 1204
Tru9I TTAA 5 cut(s) 680, 966, 1088, 1110, 1204
TscAI CASTG 1 cut(s) 894
TseFI GTSAC 3 cut(s) 379, 631, 754
TseI GCWGC 6 cut(s) 176, 432, 444, 616, 857, 1191
Tsp45I GTSAC 3 cut(s) 379, 631, 754
TspDTI ATGAA 2 cut(s) 855, 1058
TspGWI ACGGA 1 cut(s) 473
TspMI CCCGGG 1 cut(s) 335
TspRI CASTG 1 cut(s) 894
XapI RAATTY 1 cut(s) 1067
XceI RCATGY 2 cut(s) 316, 806
XmaI CCCGGG 1 cut(s) 335
XmiI GTMKAC 1 cut(s) 639
ZrmI AGTACT 1 cut(s) 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.