Prupe.6G228800_v2.0.a1

Alcohol dehydrogenase GroES-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001379
Physical Location & Seq
Reverse (-)
23249598 .. 23251072
1475 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G228800.1

Sequence Viewer

Length: 1017 bp
ATGGAGGGAAGAAAGGCATTTGGTTGGGCAGCCAGAGACACTTCTGGAATTCTTTCTCCCTATTCATTCAATCTCAGGAAAACAGGTTCAGAAGATGTAGTGTTGAAGGTTTTGTACTGTGGAGTGGACCACACAGATCTTCATCAGATGAGAAATGAGATTCACAATACCAATTACCCTTTGGTTCCTGGGCATGAAGTGGTGGGAGAAGTGGTGGAGTTGGGTTCAGAGGTAAAGAAATTTAGAGTTGGGGACTTAGTGGGAGTTGGGGGTATAGTTGGGTCCTGTGGAGAATGCCTGTCTTGCCAATCCAACATGGAGCAATATTGCCACAACAAAATCGTCACTTACAATGATACCAACAAAGATGGAAGTCCCACGAGGGGAGGCTTCTCCTCTGCCATGGTTGTTCATCAAAGGTTTGTGGTTCGAATACCCGAGAAGCTAGCACTGGATCAGGCAGCTCCATTGTTGTGTGCTGGGGTAACAGCTTACAGTCCACTGAAGCAATTCATGGGTTCTAATAAGGTTCTCAAGGCAGGGATATTGGGTTTAGGAGGAGTAGGTCATCTGGGTGTTTCTTCCGATAAGAAGAGGGAAGAGGCTTTGGAAATTTTAGGTGCAGATGCTTTTCTGGTGAGCTCCAATGCAGCTGAGATGGAGGGAGCTGCTAATAGCGTTGACTATATTCTTGACACCGTGCCAGCTTTGCACCCGCTGCGATTGTACCTTTCGCTGCTCAAGGTTGATGGAAAACTCATAATAGTTGCTGCTGTGCCTAAGCCTCTGCAGCTTGATGCAGTTGACATAATTCTAGGGAAGAGGACCATTACCGGGAGCCTCATCGGCAGCATGGAAGAAACTCGGGAAATATTGGAGTTTTGGGCAGACAAGGGTTTGAAATCTTTCATAGAGACTGTAAAAATGGATTATCTTAACGAGGCATTTGAGAGAATGGAAAGGAATGATGTGAGGTTTAGGTTTGTCCTGGATGTAGCTGGCAGTGACCTGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

339

Amino Acids

36.82

Weight (kDa)

5.58

Isoelectric Point (pI)

31.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 716
AclWI GGATC 1 cut(s) 462
AcsI RAATTY 3 cut(s) 48, 239, 612
AcuI CTGAAG 1 cut(s) 524
AfaI GTAC 2 cut(s) 116, 728
AfiI CCNNNNNNNGG 2 cut(s) 383, 834
AgsI TTSAA 3 cut(s) 70, 106, 901
AjnI CCWGG 3 cut(s) 187, 987, 1008
AloI GAACNNNNNNTCC 2 cut(s) 70, 102
AluBI AGCT 9 cut(s) 445, 464, 491, 642, 653, 668, 707, 793, 998
AluI AGCT 9 cut(s) 445, 464, 491, 642, 653, 668, 707, 793, 998
Alw21I GWGCWC 1 cut(s) 644
Alw26I GTCTC 2 cut(s) 30, 908
AlwI GGATC 1 cut(s) 462
Ama87I CYCGRG 2 cut(s) 437, 864
ApeKI GCWGC 9 cut(s) 29, 461, 650, 668, 718, 736, 770, 790, 849
ApoI RAATTY 3 cut(s) 48, 239, 612
Asp700I GAANNNNTTC 3 cut(s) 52, 509, 905
AspS9I GGNCC 3 cut(s) 127, 282, 825
AsuC2I CCSGG 1 cut(s) 835
AsuHPI GGTGA 1 cut(s) 649
AsuII TTCGAA 1 cut(s) 430
AsuNHI GCTAGC 1 cut(s) 445
AvaI CYCGRG 2 cut(s) 437, 864
AvaII GGWCC 3 cut(s) 127, 282, 825
BanII GRGCYC 1 cut(s) 644
BarI GAAGNNNNNNTAC 2 cut(s) 98, 130
BauI CACGAG 1 cut(s) 379
Bbv12I GWGCWC 1 cut(s) 644
BbvI GCAGC 9 cut(s) 41, 473, 655, 662, 705, 723, 757, 802, 861
BccI CCATC 3 cut(s) 362, 652, 743
BciT130I CCWGG 3 cut(s) 189, 989, 1010
BcnI CCSGG 1 cut(s) 835
BcoDI GTCTC 2 cut(s) 30, 908
BfaI CTAG 2 cut(s) 446, 815
BfmI CTRYAG 1 cut(s) 788
BglI GCCNNNNNGGC 1 cut(s) 846
BglII AGATCT 1 cut(s) 136
BisI GCNGC 9 cut(s) 30, 462, 651, 669, 719, 737, 771, 791, 850
BlsI GCNGC 9 cut(s) 31, 463, 652, 670, 720, 738, 772, 792, 851
Bme1390I CCNGG 4 cut(s) 189, 835, 989, 1010
Bme18I GGWCC 3 cut(s) 127, 282, 825
BmeT110I CYCGRG 2 cut(s) 437, 864
BmgT120I GGNCC 3 cut(s) 127, 282, 825
BmiI GGNNCC 3 cut(s) 186, 283, 839
BmrFI CCNGG 4 cut(s) 189, 835, 989, 1010
BmsI GCATC 2 cut(s) 616, 787
BmtI GCTAGC 1 cut(s) 449
Bpu10I CCTNAGC 1 cut(s) 780
Bpu14I TTCGAA 1 cut(s) 430
BpuEI CTTGAG 2 cut(s) 518, 725
BpuMI CCSGG 1 cut(s) 835
BsaBI GATNNNNATC 1 cut(s) 141
BsaJI CCNNGG 2 cut(s) 188, 402
BsaXI ACNNNNNCTCC 2 cut(s) 198, 228
Bsc4I CCNNNNNNNGG 2 cut(s) 383, 834
Bse1I ACTGG 1 cut(s) 456
Bse8I GATNNNNATC 1 cut(s) 141
BseBI CCWGG 3 cut(s) 189, 989, 1010
BseDI CCNNGG 2 cut(s) 188, 402
BseGI GGATG 1 cut(s) 997
BseJI GATNNNNATC 1 cut(s) 141
BseLI CCNNNNNNNGG 2 cut(s) 383, 834
BseMII CTCAG 2 cut(s) 88, 645
BseNI ACTGG 1 cut(s) 456
BseRI GAGGAG 2 cut(s) 385, 573
BseXI GCAGC 9 cut(s) 41, 473, 655, 662, 705, 723, 757, 802, 861
BseYI CCCAGC 1 cut(s) 479
BsgI GTGCAG 1 cut(s) 642
BsiHKAI GWGCWC 1 cut(s) 644
BsiHKCI CYCGRG 2 cut(s) 437, 864
BsiSI CCGG 1 cut(s) 834
BslFI GGGAC 2 cut(s) 266, 360
BslI CCNNNNNNNGG 2 cut(s) 383, 834
BsmAI GTCTC 2 cut(s) 30, 908
BsmFI GGGAC 2 cut(s) 266, 360
BsmI GAATGC 1 cut(s) 299
BsoBI CYCGRG 2 cut(s) 437, 864
Bsp119I TTCGAA 1 cut(s) 430
Bsp1286I GDGCHC 1 cut(s) 644
Bsp143I GATC 2 cut(s) 136, 454
Bsp19I CCATGG 1 cut(s) 402
BspACI CCGC 1 cut(s) 716
BspCNI CTCAG 2 cut(s) 87, 646
BspLI GGNNCC 3 cut(s) 186, 283, 839
BspMAI CTGCAG 1 cut(s) 792
BspOI GCTAGC 1 cut(s) 449
BspPI GGATC 1 cut(s) 462
BspT104I TTCGAA 1 cut(s) 430
BsrI ACTGG 1 cut(s) 456
BssECI CCNNGG 2 cut(s) 188, 402
BssMI GATC 2 cut(s) 136, 454
BssSI CACGAG 1 cut(s) 379
BssT1I CCWWGG 1 cut(s) 402
Bst2BI CACGAG 1 cut(s) 379
Bst2UI CCWGG 3 cut(s) 189, 989, 1010
Bst4CI ACNGT 4 cut(s) 119, 497, 700, 919
Bst6I CTCTTC 3 cut(s) 587, 594, 815
BstAPI GCANNNNNTGC 1 cut(s) 718
BstBI TTCGAA 1 cut(s) 430
BstC8I GCNNGC 3 cut(s) 447, 705, 1000
BstDEI CTNAG 4 cut(s) 74, 256, 654, 780
BstDSI CCRYGG 1 cut(s) 402
BstF5I GGATG 1 cut(s) 997
BstKTI GATC 2 cut(s) 139, 457
BstMAI GTCTC 2 cut(s) 30, 908
BstMBI GATC 2 cut(s) 136, 454
BstMWI GCNNNNNNNGC 5 cut(s) 303, 709, 718, 790, 846
BstNI CCWGG 3 cut(s) 189, 989, 1010
BstSCI CCNGG 4 cut(s) 187, 833, 987, 1008
BstSFI CTRYAG 1 cut(s) 788
BstV1I GCAGC 9 cut(s) 41, 473, 655, 662, 705, 723, 757, 802, 861
BstX2I RGATCY 1 cut(s) 136
BstYI RGATCY 1 cut(s) 136
BtgI CCRYGG 1 cut(s) 402
BtsCI GGATG 1 cut(s) 997
BtsI GCAGTG 1 cut(s) 1009
BtsIMutI CAGTG 3 cut(s) 449, 500, 1009
Cac8I GCNNGC 3 cut(s) 447, 705, 1000
Cfr13I GGNCC 3 cut(s) 127, 282, 825
Csp6I GTAC 2 cut(s) 115, 727
CviAII CATG 5 cut(s) 194, 316, 403, 514, 853
CviQI GTAC 2 cut(s) 115, 727
DdeI CTNAG 4 cut(s) 74, 256, 654, 780
DpnI GATC 2 cut(s) 138, 456
DpnII GATC 2 cut(s) 136, 454
Eam1104I CTCTTC 3 cut(s) 587, 594, 815
EarI CTCTTC 3 cut(s) 587, 594, 815
Ecl136II GAGCTC 1 cut(s) 642
Eco130I CCWWGG 1 cut(s) 402
Eco24I GRGCYC 1 cut(s) 644
Eco47I GGWCC 3 cut(s) 127, 282, 825
Eco53kI GAGCTC 1 cut(s) 642
Eco57I CTGAAG 1 cut(s) 524
Eco88I CYCGRG 2 cut(s) 437, 864
EcoICRI GAGCTC 1 cut(s) 642
EcoO109I RGGNCCY 1 cut(s) 282
EcoRI GAATTC 1 cut(s) 48
EcoRII CCWGG 3 cut(s) 187, 987, 1008
EcoT14I CCWWGG 1 cut(s) 402
EcoT38I GRGCYC 1 cut(s) 644
ErhI CCWWGG 1 cut(s) 402
FaeI CATG 5 cut(s) 197, 319, 406, 517, 856
FaqI GGGAC 2 cut(s) 266, 360
FatI CATG 5 cut(s) 193, 315, 402, 513, 852
FauI CCCGC 1 cut(s) 723
Fnu4HI GCNGC 9 cut(s) 30, 462, 651, 669, 719, 737, 771, 791, 850
FokI GGATG 1 cut(s) 1004
FriOI GRGCYC 1 cut(s) 644
Fsp4HI GCNGC 9 cut(s) 30, 462, 651, 669, 719, 737, 771, 791, 850
FspBI CTAG 2 cut(s) 446, 815
GluI GCNGC 9 cut(s) 30, 462, 651, 669, 719, 737, 771, 791, 850
GsaI CCCAGC 1 cut(s) 483
HapII CCGG 1 cut(s) 834
Hin1II CATG 5 cut(s) 197, 319, 406, 517, 856
HincII GTYRAC 2 cut(s) 682, 805
HindII GTYRAC 2 cut(s) 682, 805
HinfI GANTC 1 cut(s) 160
HpaII CCGG 1 cut(s) 834
HphI GGTGA 1 cut(s) 649
Hpy166II GTNNAC 4 cut(s) 127, 500, 682, 805
Hpy188I TCNGA 4 cut(s) 91, 147, 229, 586
Hpy188III TCNNGA 4 cut(s) 45, 76, 692, 866
Hpy8I GTNNAC 4 cut(s) 127, 500, 682, 805
HpyAV CCTTC 1 cut(s) 100
HpyCH4III ACNGT 4 cut(s) 119, 497, 700, 919
HpyCH4V TGCA 5 cut(s) 623, 650, 712, 790, 800
HpyF10VI GCNNNNNNNGC 5 cut(s) 303, 709, 718, 790, 846
HpyF3I CTNAG 4 cut(s) 74, 256, 654, 780
Hsp92II CATG 5 cut(s) 197, 319, 406, 517, 856
Kzo9I GATC 2 cut(s) 136, 454
LmnI GCTCC 5 cut(s) 319, 469, 647, 665, 837
Lsp1109I GCAGC 9 cut(s) 41, 473, 655, 662, 705, 723, 757, 802, 861
LweI GCATC 2 cut(s) 616, 787
MaeI CTAG 2 cut(s) 446, 815
MaeIII GTNAC 3 cut(s) 343, 484, 1004
MalI GATC 2 cut(s) 138, 456
MboI GATC 2 cut(s) 136, 454
MboII GAAGA 8 cut(s) 21, 104, 131, 573, 604, 611, 832, 869
MflI RGATCY 1 cut(s) 136
MhlI GDGCHC 1 cut(s) 644
MluCI AATT 6 cut(s) 48, 172, 239, 509, 612, 810
MmeI TCCRAC 1 cut(s) 336
MroXI GAANNNNTTC 3 cut(s) 52, 509, 905
MseI TTAA 1 cut(s) 936
MslI CAYNNNNRTG 2 cut(s) 472, 573
MspA1I CMGCKG 2 cut(s) 653, 718
MspI CCGG 1 cut(s) 834
MspR9I CCNGG 4 cut(s) 189, 835, 989, 1010
Mva1269I GAATGC 1 cut(s) 299
MvaI CCWGG 3 cut(s) 189, 989, 1010
MwoI GCNNNNNNNGC 5 cut(s) 303, 709, 718, 790, 846
NciI CCSGG 1 cut(s) 835
NcoI CCATGG 1 cut(s) 402
NdeII GATC 2 cut(s) 136, 454
NheI GCTAGC 1 cut(s) 445
NlaIII CATG 5 cut(s) 197, 319, 406, 517, 856
NlaIV GGNNCC 3 cut(s) 186, 283, 839
NmuCI GTSAC 2 cut(s) 343, 1004
NspV TTCGAA 1 cut(s) 430
PctI GAATGC 1 cut(s) 299
PdmI GAANNNNTTC 3 cut(s) 52, 509, 905
PfeI GAWTC 1 cut(s) 160
PfoI TCCNGGA 1 cut(s) 987
PkrI GCNGC 9 cut(s) 31, 463, 652, 670, 720, 738, 772, 792, 851
PpuMI RGGWCCY 1 cut(s) 282
Psp124BI GAGCTC 1 cut(s) 644
Psp5II RGGWCCY 1 cut(s) 282
Psp6I CCWGG 3 cut(s) 187, 987, 1008
PspFI CCCAGC 1 cut(s) 479
PspGI CCWGG 3 cut(s) 187, 987, 1008
PspN4I GGNNCC 3 cut(s) 186, 283, 839
PspPI GGNCC 3 cut(s) 127, 282, 825
PspPPI RGGWCCY 1 cut(s) 282
PstI CTGCAG 1 cut(s) 792
PsuI RGATCY 1 cut(s) 136
PvuII CAGCTG 1 cut(s) 653
RsaI GTAC 2 cut(s) 116, 728
RsaNI GTAC 2 cut(s) 115, 727
RseI CAYNNNNRTG 2 cut(s) 472, 573
SacI GAGCTC 1 cut(s) 644
SaqAI TTAA 1 cut(s) 936
SatI GCNGC 9 cut(s) 30, 462, 651, 669, 719, 737, 771, 791, 850
Sau3AI GATC 2 cut(s) 136, 454
Sau96I GGNCC 3 cut(s) 127, 282, 825
ScrFI CCNGG 4 cut(s) 189, 835, 989, 1010
SduI GDGCHC 1 cut(s) 644
SfaNI GCATC 2 cut(s) 616, 787
SfcI CTRYAG 1 cut(s) 788
SfuI TTCGAA 1 cut(s) 430
SinI GGWCC 3 cut(s) 127, 282, 825
SmiMI CAYNNNNRTG 2 cut(s) 472, 573
SmlI CTYRAG 2 cut(s) 533, 740
SmoI CTYRAG 2 cut(s) 533, 740
Sse9I AATT 6 cut(s) 48, 172, 239, 509, 612, 810
SsiI CCGC 1 cut(s) 716
SspI AATATT 2 cut(s) 326, 873
SspMI CTAG 2 cut(s) 446, 815
SstI GAGCTC 1 cut(s) 644
StyD4I CCNGG 4 cut(s) 187, 833, 987, 1008
StyI CCWWGG 1 cut(s) 402
TaaI ACNGT 4 cut(s) 119, 497, 700, 919
TaqI TCGA 1 cut(s) 430
TasI AATT 6 cut(s) 48, 172, 239, 509, 612, 810
TatI WGTACW 1 cut(s) 114
TfiI GAWTC 1 cut(s) 160
Tru1I TTAA 1 cut(s) 936
Tru9I TTAA 1 cut(s) 936
TscAI CASTG 3 cut(s) 456, 507, 1009
TseFI GTSAC 2 cut(s) 343, 1004
TseI GCWGC 9 cut(s) 29, 461, 650, 668, 718, 736, 770, 790, 849
Tsp45I GTSAC 2 cut(s) 343, 1004
TspDTI ATGAA 6 cut(s) 54, 131, 210, 401, 502, 898
TspRI CASTG 3 cut(s) 456, 507, 1009
VpaK11BI GGWCC 3 cut(s) 127, 282, 825
XapI RAATTY 3 cut(s) 48, 239, 612
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
XmnI GAANNNNTTC 3 cut(s) 52, 509, 905
XspI CTAG 2 cut(s) 446, 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.