Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001071

Physical Location & Seq

Genomic Coordinates Forward (+)

27627867 .. 27628577

Gene Structure 711 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1197800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 600 bp

ATGGCGGACGAGGAGAAGCAGGAGAGGGAGATTAAAAAGCAGATTGAGAGGGTTTGTCAGTCAATGCAGGTGGGTAATGGGTCTGATCAGGTCTCGGAGGCTGAGGCCAATCAGGAAGTGAAAGTGAATTTGGACCCTGGGGTTAAGATTGGTTTTGCTCTTGGGTCCTCAAAACTGGGACCGAAAGAGAAAGGGGGAAGTGCGAAATTGGTGTTCGATGAGGCCGAGGATGAGATGAATGATAGGAAGGTTAAGAAGGCGAAAAATGGAAGTGGCGGTGACGCAAGGCGCTTGTCGTTGGAGGAGTTGATGAGGAAGGAGGAGAAGAAGAAGGAAAGGATTAATAGGAAGGATTATTGGTTACGTGAGGGGATCGTTGTTAAACATGTTTTGAGAGTTGACCAGGCAGAGCTTGAGGCCGTGATTCCGACTGTTGGGTGCCTTGTGAAGATAGTCAATGGGGCTTACAGAGGATCAAATGCAAAGTTGCTGGCAGTCGACAAAAAATACTTTTGCGCTAAGGTGCAGATAGAGAAGGGCGTGTACGATGGTAGAGTGCTTAAAGCTGTCCAGTGTGAAGATATTTGTAAACTTGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0016604 GO:0016607 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0033554 GO:0034641 GO:0034645 GO:0035874 GO:0040008 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048638 GO:0050789 GO:0050793 GO:0050896 GO:0051716 GO:0065007 GO:0070013 GO:0071496 GO:0071704 GO:0090304 GO:0097159 GO:0120126 GO:1901360 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kin17_mid

Protein Analysis

200

Amino Acids

22.17

Weight (kDa)

8.83

Isoelectric Point (pI)

21.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GPKOW_C	PF25088	128 - 197	4.2e-07	GPKOW C-terminal domain
SH3_KIN17_C	PF25092	143 - 198	1.2e-19	KIN17 C-terminal SH3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001071)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55460
fragaria_vesca	FvH4_7g22390 FvH4_7g22390 FvH4_7g22390 FvH4_7g22390 FvH4_7g22390 FvH4_7g22390
malus_domestica	MD01G1133500.v1.1 MD07G1197800.v1.1
prunus_persica	Prupe.1G588200_v2.0.a1 Prupe.1G588200_v2.0.a1 Prupe.1G588200_v2.0.a1 Prupe.1G588200_v2.0.a1 Prupe.1G588200_v2.0.a1 Prupe.1G588200_v2.0.a1 Prupe.1G588200_v2.0.a1 Prupe.2G234600_v2.0.a1 Prupe.4G141300_v2.0.a1 Prupe.4G141300_v2.0.a1 Prupe.4G141300_v2.0.a1 Prupe.4G141300_v2.0.a1 Prupe.4G141400_v2.0.a1 Prupe.4G141400_v2.0.a1 Prupe.4G141400_v2.0.a1 Prupe.4G141400_v2.0.a1 Prupe.6G266400_v2.0.a1
pyrus_communis	pycom01g15430
rosa_chinensis	RchiOBHm_Chr1g0367021 RchiOBHm_Chr2g0124981 RchiOBHm_Chr2g0124991 RchiOBHm_Chr4g0406611 RchiOBHm_Chr4g0406621
rosa_laevigata	RLG00000027306 RLG00000027315
rosa_multiflora	Rmu_sc0000796.1_g000031 Rmu_sc0002269.1_g000005 Rmu_sc0002774.1_g000007 Rmu_sc0003467.1_g000020 Rmu_sc0008068.1_g000004 Rmu_sc0024461.1_g000001
rosa_roxburghii	Rroxscaffold_2G00118480 Rroxscaffold_2G00118780 Rroxscaffold_4G00289700 Rroxscaffold_5G00351460
rosa_rugosa	Rorug01G0334100 Rorug02G0254600
rosa_samantha	Rh1AG340600 Rh1AG340700 Rh1BG301200 Rh1DG333600 Rh2AG313300 Rh2BG321500 Rh2BG321600 Rh2CG302700 Rh7CG519000
rosa_wichuraiana	Rw0G023890 Rw1G030250 Rw1G030260 Rw2G025300 Rw4G011370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	58
Acc36I	ACCTGC	1 cut(s)	58
AccB1I	GGYRCC	1 cut(s)	438
AccI	GTMKAC	1 cut(s)	498
AciI	CCGC	2 cut(s)	5, 276
AclWI	GGATC	2 cut(s)	380, 481
AcsI	RAATTY	1 cut(s)	127
AfaI	GTAC	1 cut(s)	545
AfiI	CCNNNNNNNGG	1 cut(s)	434
AflIII	ACRYGT	1 cut(s)	385
AjnI	CCWGG	2 cut(s)	136, 402
AjuI	GAANNNNNNNTTGG	2 cut(s)	113, 145
AluBI	AGCT	2 cut(s)	412, 566
AluI	AGCT	2 cut(s)	412, 566
Alw26I	GTCTC	1 cut(s)	97
AlwI	GGATC	2 cut(s)	380, 481
AoxI	GGCC	3 cut(s)	105, 222, 417
ApoI	RAATTY	1 cut(s)	127
AseI	ATTAAT	1 cut(s)	342
AspLEI	GCGC	2 cut(s)	291, 518
AspS9I	GGNCC	3 cut(s)	133, 165, 179
AsuHPI	GGTGA	1 cut(s)	290
AvaII	GGWCC	3 cut(s)	133, 165, 179
BanI	GGYRCC	1 cut(s)	438
BarI	GAAGNNNNNNTAC	2 cut(s)	527, 559
BbvCI	CCTCAGC	1 cut(s)	102
BccI	CCATC	1 cut(s)	542
BceAI	ACGGC	1 cut(s)	404
BciT130I	CCWGG	2 cut(s)	138, 404
BclI	TGATCA	1 cut(s)	85
BcoDI	GTCTC	1 cut(s)	97
BfaI	CTAG	1 cut(s)	598
BfoI	RGCGCY	1 cut(s)	292
BfuAI	ACCTGC	1 cut(s)	58
Bme1390I	CCNGG	2 cut(s)	138, 404
Bme18I	GGWCC	3 cut(s)	133, 165, 179
BmgT120I	GGNCC	3 cut(s)	133, 165, 179
BmiI	GGNNCC	4 cut(s)	135, 166, 180, 440
BmrFI	CCNGG	2 cut(s)	138, 404
BmrI	ACTGGG	1 cut(s)	185
BmuI	ACTGGG	1 cut(s)	185
Bpu10I	CCTNAGC	2 cut(s)	102, 519
BpuEI	CTTGAG	1 cut(s)	434
BsaAI	YACGTR	1 cut(s)	365
BsaI	GGTCTC	1 cut(s)	97
BsaJI	CCNNGG	3 cut(s)	136, 137, 225
Bsc4I	CCNNNNNNNGG	1 cut(s)	434
Bse1I	ACTGG	2 cut(s)	180, 571
BseBI	CCWGG	2 cut(s)	138, 404
BseDI	CCNNGG	3 cut(s)	136, 137, 225
BseGI	GGATG	1 cut(s)	235
BseLI	CCNNNNNNNGG	1 cut(s)	434
BseMII	CTCAG	1 cut(s)	93
BseNI	ACTGG	2 cut(s)	180, 571
BseRI	GAGGAG	3 cut(s)	26, 317, 335
BsgI	GTGCAG	1 cut(s)	545
BshFI	GGCC	3 cut(s)	107, 224, 419
BshNI	GGYRCC	1 cut(s)	438
BslFI	GGGAC	1 cut(s)	192
BslI	CCNNNNNNNGG	1 cut(s)	434
BsmAI	GTCTC	1 cut(s)	97
BsmFI	GGGAC	1 cut(s)	192
BsnI	GGCC	3 cut(s)	107, 224, 419
Bso31I	GGTCTC	1 cut(s)	97
Bsp143I	GATC	3 cut(s)	85, 372, 473
BspACI	CCGC	2 cut(s)	5, 276
BspANI	GGCC	3 cut(s)	107, 224, 419
BspCNI	CTCAG	1 cut(s)	94
BspLI	GGNNCC	4 cut(s)	135, 166, 180, 440
BspMI	ACCTGC	1 cut(s)	58
BspPI	GGATC	2 cut(s)	380, 481
BspT107I	GGYRCC	1 cut(s)	438
BspTNI	GGTCTC	1 cut(s)	97
BsrI	ACTGG	2 cut(s)	180, 571
BssECI	CCNNGG	3 cut(s)	136, 137, 225
BssMI	GATC	3 cut(s)	85, 372, 473
Bst2UI	CCWGG	2 cut(s)	138, 404
Bst4CI	ACNGT	1 cut(s)	433
BstBAI	YACGTR	1 cut(s)	365
BstC8I	GCNNGC	1 cut(s)	492
BstDEI	CTNAG	2 cut(s)	102, 519
BstF5I	GGATG	1 cut(s)	235
BstH2I	RGCGCY	1 cut(s)	292
BstHHI	GCGC	2 cut(s)	291, 518
BstKTI	GATC	3 cut(s)	88, 375, 476
BstMAI	GTCTC	1 cut(s)	97
BstMBI	GATC	3 cut(s)	85, 372, 473
BstNI	CCWGG	2 cut(s)	138, 404
BstNSI	RCATGY	1 cut(s)	389
BstSCI	CCNGG	2 cut(s)	136, 402
BsuRI	GGCC	3 cut(s)	107, 224, 419
BtsCI	GGATG	1 cut(s)	235
BtsIMutI	CAGTG	1 cut(s)	578
BveI	ACCTGC	1 cut(s)	58
Cac8I	GCNNGC	1 cut(s)	492
CfoI	GCGC	2 cut(s)	291, 518
Cfr13I	GGNCC	3 cut(s)	133, 165, 179
CseI	GACGC	1 cut(s)	290
Csp6I	GTAC	1 cut(s)	544
CspCI	CAANNNNNGTGG	2 cut(s)	51, 86
CviAII	CATG	1 cut(s)	386
CviJI	RGCY	8 cut(s)	101, 107, 224, 412, 419, 464, 566, 597
CviKI_1	RGCY	8 cut(s)	101, 107, 224, 412, 419, 464, 566, 597
CviQI	GTAC	1 cut(s)	544
DdeI	CTNAG	2 cut(s)	102, 519
DpnI	GATC	3 cut(s)	87, 374, 475
DpnII	GATC	3 cut(s)	85, 372, 473
EciI	GGCGGA	1 cut(s)	20
Eco31I	GGTCTC	1 cut(s)	97
Eco47I	GGWCC	3 cut(s)	133, 165, 179
EcoO109I	RGGNCCY	1 cut(s)	165
EcoRII	CCWGG	2 cut(s)	136, 402
FaeI	CATG	1 cut(s)	389
FaiI	YATR	1 cut(s)	387
FaqI	GGGAC	1 cut(s)	192
FatI	CATG	1 cut(s)	385
FbaI	TGATCA	1 cut(s)	85
FblI	GTMKAC	1 cut(s)	498
FokI	GGATG	1 cut(s)	242
FspBI	CTAG	1 cut(s)	598
GlaI	GCGC	2 cut(s)	290, 517
HaeII	RGCGCY	1 cut(s)	292
HaeIII	GGCC	3 cut(s)	107, 224, 419
HgaI	GACGC	1 cut(s)	290
HhaI	GCGC	2 cut(s)	291, 518
Hin1II	CATG	1 cut(s)	389
Hin6I	GCGC	2 cut(s)	289, 516
HinP1I	GCGC	2 cut(s)	289, 516
HincII	GTYRAC	2 cut(s)	400, 499
HindII	GTYRAC	2 cut(s)	400, 499
HinfI	GANTC	1 cut(s)	424
HphI	GGTGA	1 cut(s)	290
Hpy166II	GTNNAC	4 cut(s)	400, 499, 544, 590
Hpy188I	TCNGA	3 cut(s)	85, 97, 429
Hpy188III	TCNNGA	1 cut(s)	113
Hpy8I	GTNNAC	4 cut(s)	400, 499, 544, 590
HpyAV	CCTTC	6 cut(s)	241, 250, 310, 325, 343, 529
HpyCH4III	ACNGT	1 cut(s)	433
HpyCH4IV	ACGT	1 cut(s)	364
HpyCH4V	TGCA	3 cut(s)	67, 482, 526
HpyF3I	CTNAG	2 cut(s)	102, 519
HpySE526I	ACGT	1 cut(s)	364
Hsp92II	CATG	1 cut(s)	389
HspAI	GCGC	2 cut(s)	289, 516
Ksp22I	TGATCA	1 cut(s)	85
Kzo9I	GATC	3 cut(s)	85, 372, 473
MaeI	CTAG	1 cut(s)	598
MaeII	ACGT	1 cut(s)	364
MaeIII	GTNAC	2 cut(s)	278, 360
MalI	GATC	3 cut(s)	87, 374, 475
MboI	GATC	3 cut(s)	85, 372, 473
MboII	GAAGA	4 cut(s)	337, 340, 460, 590
MluCI	AATT	2 cut(s)	127, 206
MmeI	TCCRAC	2 cut(s)	279, 452
MseI	TTAA	6 cut(s)	33, 144, 252, 342, 381, 561
MspR9I	CCNGG	2 cut(s)	138, 404
MvaI	CCWGG	2 cut(s)	138, 404
NdeII	GATC	3 cut(s)	85, 372, 473
NlaIII	CATG	1 cut(s)	389
NlaIV	GGNNCC	4 cut(s)	135, 166, 180, 440
NmeAIII	GCCGAG	1 cut(s)	250
NmuCI	GTSAC	1 cut(s)	278
NspI	RCATGY	1 cut(s)	389
PaqCI	CACCTGC	1 cut(s)	58
PasI	CCCWGGG	1 cut(s)	137
PciI	ACATGT	1 cut(s)	385
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PfeI	GAWTC	1 cut(s)	424
Ppu21I	YACGTR	1 cut(s)	365
PpuMI	RGGWCCY	1 cut(s)	165
PscI	ACATGT	1 cut(s)	385
PshBI	ATTAAT	1 cut(s)	342
Psp5II	RGGWCCY	1 cut(s)	165
Psp6I	CCWGG	2 cut(s)	136, 402
PspGI	CCWGG	2 cut(s)	136, 402
PspN4I	GGNNCC	4 cut(s)	135, 166, 180, 440
PspPI	GGNCC	3 cut(s)	133, 165, 179
PspPPI	RGGWCCY	1 cut(s)	165
RsaI	GTAC	1 cut(s)	545
RsaNI	GTAC	1 cut(s)	544
SalI	GTCGAC	1 cut(s)	497
SaqAI	TTAA	6 cut(s)	33, 144, 252, 342, 381, 561
Sau3AI	GATC	3 cut(s)	85, 372, 473
Sau96I	GGNCC	3 cut(s)	133, 165, 179
ScrFI	CCNGG	2 cut(s)	138, 404
SetI	ASST	7 cut(s)	72, 93, 252, 367, 414, 525, 568
SinI	GGWCC	3 cut(s)	133, 165, 179
SmlI	CTYRAG	1 cut(s)	413
SmoI	CTYRAG	1 cut(s)	413
Sse9I	AATT	2 cut(s)	127, 206
SsiI	CCGC	2 cut(s)	5, 276
SspMI	CTAG	1 cut(s)	598
StyD4I	CCNGG	2 cut(s)	136, 402
TaaI	ACNGT	1 cut(s)	433
TaiI	ACGT	1 cut(s)	367
TaqI	TCGA	2 cut(s)	216, 498
TaqII	GACCGA	1 cut(s)	196
TasI	AATT	2 cut(s)	127, 206
TfiI	GAWTC	1 cut(s)	424
Tru1I	TTAA	6 cut(s)	33, 144, 252, 342, 381, 561
Tru9I	TTAA	6 cut(s)	33, 144, 252, 342, 381, 561
TscAI	CASTG	1 cut(s)	578
TseFI	GTSAC	1 cut(s)	278
Tsp45I	GTSAC	1 cut(s)	278
TspDTI	ATGAA	1 cut(s)	251
TspRI	CASTG	1 cut(s)	578
VpaK11BI	GGWCC	3 cut(s)	133, 165, 179
VspI	ATTAAT	1 cut(s)	342
XapI	RAATTY	1 cut(s)	127
XceI	RCATGY	1 cut(s)	389
XmiI	GTMKAC	1 cut(s)	498
XspI	CTAG	1 cut(s)	598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.