DNA RNA-binding protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C2H2-zf_KIN17 | PF25095 | 24 - 53 | 2.3e-20 | KIN17 C2H2-type zinc finger domain |
| WH_KIN17 | PF10357 | 59 - 157 | 1.6e-29 | KIN17 WH-like domain |
| KN17_SH3 | PF18131 | 254 - 307 | 8.4e-22 | KN17 SH3-like domain |
| GPKOW_C | PF25088 | 263 - 319 | 5.1e-06 | GPKOW C-terminal domain |
| SH3_KIN17_C | PF25092 | 322 - 361 | 3.3e-13 | KIN17 C-terminal SH3 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 957 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 381 |
| AccBSI | CCGCTC | 1 cut(s) | 784 |
| AccII | CGCG | 3 cut(s) | 38, 108, 189 |
| AciI | CCGC | 9 cut(s) | 106, 187, 253, 261, 295, 506, 701, 784, 818 |
| AclWI | GGATC | 1 cut(s) | 794 |
| AcyI | GRCGYC | 2 cut(s) | 371, 1026 |
| AfaI | GTAC | 2 cut(s) | 80, 284 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 381, 953 |
| AflIII | ACRYGT | 1 cut(s) | 904 |
| AgsI | TTSAA | 6 cut(s) | 124, 277, 553, 598, 887, 896 |
| AjiI | CACGTC | 1 cut(s) | 304 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 368, 400 |
| AleI | CACNNNNGTG | 1 cut(s) | 528 |
| AluBI | AGCT | 4 cut(s) | 70, 812, 931, 1052 |
| AluI | AGCT | 4 cut(s) | 70, 812, 931, 1052 |
| Alw21I | GWGCWC | 1 cut(s) | 237 |
| Alw26I | GTCTC | 4 cut(s) | 212, 362, 407, 439 |
| AlwI | GGATC | 1 cut(s) | 794 |
| Ama87I | CYCGRG | 1 cut(s) | 675 |
| ApeKI | GCWGC | 3 cut(s) | 61, 246, 698 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 14 |
| AspLEI | GCGC | 3 cut(s) | 156, 246, 1004 |
| AspS9I | GGNCC | 1 cut(s) | 345 |
| AsuC2I | CCSGG | 2 cut(s) | 676, 677 |
| AsuHPI | GGTGA | 3 cut(s) | 542, 550, 952 |
| AsuII | TTCGAA | 1 cut(s) | 620 |
| AvaI | CYCGRG | 1 cut(s) | 675 |
| AvaII | GGWCC | 1 cut(s) | 345 |
| BanI | GGYRCC | 1 cut(s) | 957 |
| Bbv12I | GWGCWC | 1 cut(s) | 237 |
| BbvI | GCAGC | 3 cut(s) | 48, 258, 710 |
| BccI | CCATC | 2 cut(s) | 931, 1028 |
| BceAI | ACGGC | 1 cut(s) | 133 |
| BclI | TGATCA | 1 cut(s) | 919 |
| BcnI | CCSGG | 2 cut(s) | 676, 677 |
| BcoDI | GTCTC | 4 cut(s) | 212, 362, 407, 439 |
| BfmI | CTRYAG | 1 cut(s) | 62 |
| BfoI | RGCGCY | 1 cut(s) | 157 |
| BisI | GCNGC | 5 cut(s) | 62, 106, 247, 261, 699 |
| BlsI | GCNGC | 5 cut(s) | 63, 107, 248, 262, 700 |
| Bme1390I | CCNGG | 2 cut(s) | 676, 677 |
| Bme18I | GGWCC | 1 cut(s) | 345 |
| BmeT110I | CYCGRG | 1 cut(s) | 675 |
| BmgBI | CACGTC | 1 cut(s) | 304 |
| BmgT120I | GGNCC | 1 cut(s) | 345 |
| BmiI | GGNNCC | 1 cut(s) | 959 |
| BmrFI | CCNGG | 2 cut(s) | 676, 677 |
| BmsI | GCATC | 1 cut(s) | 264 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 188, 220 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1005 |
| Bpu14I | TTCGAA | 1 cut(s) | 620 |
| BpuEI | CTTGAG | 2 cut(s) | 931, 953 |
| BpuMI | CCSGG | 2 cut(s) | 676, 677 |
| BsaBI | GATNNNNATC | 1 cut(s) | 164 |
| BsaHI | GRCGYC | 2 cut(s) | 371, 1026 |
| BsaI | GGTCTC | 1 cut(s) | 212 |
| BsaJI | CCNNGG | 5 cut(s) | 27, 54, 375, 675, 676 |
| BsaWI | WCCGGW | 1 cut(s) | 72 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 404, 434 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 381, 953 |
| Bse118I | RCCGGY | 1 cut(s) | 347 |
| Bse1I | ACTGG | 1 cut(s) | 222 |
| Bse3DI | GCAATG | 1 cut(s) | 107 |
| Bse8I | GATNNNNATC | 1 cut(s) | 164 |
| BseDI | CCNNGG | 5 cut(s) | 27, 54, 375, 675, 676 |
| BseGI | GGATG | 1 cut(s) | 652 |
| BseJI | GATNNNNATC | 1 cut(s) | 164 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 381, 953 |
| BseMI | GCAATG | 1 cut(s) | 107 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseNI | ACTGG | 1 cut(s) | 222 |
| BseRI | GAGGAG | 5 cut(s) | 224, 548, 650, 731, 749 |
| BseXI | GCAGC | 3 cut(s) | 48, 258, 710 |
| BsgI | GTGCAG | 2 cut(s) | 717, 1031 |
| Bsh1236I | CGCG | 3 cut(s) | 38, 108, 189 |
| BshNI | GGYRCC | 1 cut(s) | 957 |
| BsiHKAI | GWGCWC | 1 cut(s) | 237 |
| BsiHKCI | CYCGRG | 1 cut(s) | 675 |
| BsiSI | CCGG | 3 cut(s) | 73, 348, 676 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 381, 953 |
| BsmAI | GTCTC | 4 cut(s) | 212, 362, 407, 439 |
| BsmBI | CGTCTC | 1 cut(s) | 362 |
| BsmI | GAATGC | 1 cut(s) | 508 |
| Bso31I | GGTCTC | 1 cut(s) | 212 |
| BsoBI | CYCGRG | 1 cut(s) | 675 |
| Bsp119I | TTCGAA | 1 cut(s) | 620 |
| Bsp1286I | GDGCHC | 1 cut(s) | 237 |
| Bsp143I | GATC | 2 cut(s) | 786, 919 |
| Bsp68I | TCGCGA | 1 cut(s) | 38 |
| BspACI | CCGC | 9 cut(s) | 106, 187, 253, 261, 295, 506, 701, 784, 818 |
| BspCNI | CTCAG | 1 cut(s) | 199 |
| BspFNI | CGCG | 3 cut(s) | 38, 108, 189 |
| BspLI | GGNNCC | 1 cut(s) | 959 |
| BspMAI | CTGCAG | 1 cut(s) | 66 |
| BspPI | GGATC | 1 cut(s) | 794 |
| BspT104I | TTCGAA | 1 cut(s) | 620 |
| BspT107I | GGYRCC | 1 cut(s) | 957 |
| BspTNI | GGTCTC | 1 cut(s) | 212 |
| BsrBI | CCGCTC | 1 cut(s) | 784 |
| BsrDI | GCAATG | 1 cut(s) | 107 |
| BsrFI | RCCGGY | 1 cut(s) | 347 |
| BsrI | ACTGG | 1 cut(s) | 222 |
| BssAI | RCCGGY | 1 cut(s) | 347 |
| BssECI | CCNNGG | 5 cut(s) | 27, 54, 375, 675, 676 |
| BssMI | GATC | 2 cut(s) | 786, 919 |
| BssNI | GRCGYC | 2 cut(s) | 371, 1026 |
| BssT1I | CCWWGG | 3 cut(s) | 27, 54, 375 |
| Bst4CI | ACNGT | 2 cut(s) | 268, 527 |
| Bst6I | CTCTTC | 3 cut(s) | 437, 650, 726 |
| BstACI | GRCGYC | 2 cut(s) | 371, 1026 |
| BstBI | TTCGAA | 1 cut(s) | 620 |
| BstC8I | GCNNGC | 1 cut(s) | 978 |
| BstDEI | CTNAG | 2 cut(s) | 207, 1005 |
| BstF5I | GGATG | 1 cut(s) | 652 |
| BstFNI | CGCG | 3 cut(s) | 38, 108, 189 |
| BstH2I | RGCGCY | 1 cut(s) | 157 |
| BstHHI | GCGC | 3 cut(s) | 156, 246, 1004 |
| BstKTI | GATC | 2 cut(s) | 789, 922 |
| BstMAI | GTCTC | 4 cut(s) | 212, 362, 407, 439 |
| BstMBI | GATC | 2 cut(s) | 786, 919 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 67, 90, 126, 153, 241, 252, 707 |
| BstNSI | RCATGY | 1 cut(s) | 908 |
| BstSCI | CCNGG | 2 cut(s) | 674, 675 |
| BstSFI | CTRYAG | 1 cut(s) | 62 |
| BstUI | CGCG | 3 cut(s) | 38, 108, 189 |
| BstV1I | GCAGC | 3 cut(s) | 48, 258, 710 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 229 |
| BtgZI | GCGATG | 1 cut(s) | 241 |
| BtrI | CACGTC | 1 cut(s) | 304 |
| BtsCI | GGATG | 1 cut(s) | 652 |
| BtsI | GCAGTG | 2 cut(s) | 130, 987 |
| BtsIMutI | CAGTG | 2 cut(s) | 130, 987 |
| BtuMI | TCGCGA | 1 cut(s) | 38 |
| Cac8I | GCNNGC | 1 cut(s) | 978 |
| CfoI | GCGC | 3 cut(s) | 156, 246, 1004 |
| Cfr10I | RCCGGY | 1 cut(s) | 347 |
| Cfr13I | GGNCC | 1 cut(s) | 345 |
| Cfr9I | CCCGGG | 1 cut(s) | 675 |
| CseI | GACGC | 3 cut(s) | 178, 379, 1015 |
| Csp6I | GTAC | 2 cut(s) | 79, 283 |
| CviAII | CATG | 4 cut(s) | 136, 238, 310, 905 |
| CviQI | GTAC | 2 cut(s) | 79, 283 |
| DdeI | CTNAG | 2 cut(s) | 207, 1005 |
| DpnI | GATC | 2 cut(s) | 788, 921 |
| DpnII | GATC | 2 cut(s) | 786, 919 |
| Eam1104I | CTCTTC | 3 cut(s) | 437, 650, 726 |
| EarI | CTCTTC | 3 cut(s) | 437, 650, 726 |
| EciI | GGCGGA | 1 cut(s) | 833 |
| Eco130I | CCWWGG | 3 cut(s) | 27, 54, 375 |
| Eco31I | GGTCTC | 1 cut(s) | 212 |
| Eco47I | GGWCC | 1 cut(s) | 345 |
| Eco88I | CYCGRG | 1 cut(s) | 675 |
| EcoT14I | CCWWGG | 3 cut(s) | 27, 54, 375 |
| ErhI | CCWWGG | 3 cut(s) | 27, 54, 375 |
| Esp3I | CGTCTC | 1 cut(s) | 362 |
| FaeI | CATG | 4 cut(s) | 139, 241, 313, 908 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 31 |
| FatI | CATG | 4 cut(s) | 135, 237, 309, 904 |
| FauI | CCCGC | 1 cut(s) | 694 |
| FbaI | TGATCA | 1 cut(s) | 919 |
| Fnu4HI | GCNGC | 5 cut(s) | 62, 106, 247, 261, 699 |
| FokI | GGATG | 1 cut(s) | 659 |
| Fsp4HI | GCNGC | 5 cut(s) | 62, 106, 247, 261, 699 |
| GlaI | GCGC | 3 cut(s) | 155, 245, 1003 |
| GluI | GCNGC | 5 cut(s) | 62, 106, 247, 261, 699 |
| HaeII | RGCGCY | 1 cut(s) | 157 |
| HapII | CCGG | 3 cut(s) | 73, 348, 676 |
| HgaI | GACGC | 3 cut(s) | 178, 379, 1015 |
| HhaI | GCGC | 3 cut(s) | 156, 246, 1004 |
| Hin1I | GRCGYC | 2 cut(s) | 371, 1026 |
| Hin1II | CATG | 4 cut(s) | 139, 241, 313, 908 |
| Hin6I | GCGC | 3 cut(s) | 154, 244, 1002 |
| HinP1I | GCGC | 3 cut(s) | 154, 244, 1002 |
| HindIII | AAGCTT | 1 cut(s) | 810 |
| HinfI | GANTC | 4 cut(s) | 45, 407, 415, 943 |
| HpaII | CCGG | 3 cut(s) | 73, 348, 676 |
| HphI | GGTGA | 3 cut(s) | 542, 550, 952 |
| Hpy166II | GTNNAC | 3 cut(s) | 307, 985, 1076 |
| Hpy188I | TCNGA | 3 cut(s) | 208, 412, 578 |
| Hpy188III | TCNNGA | 3 cut(s) | 37, 217, 910 |
| Hpy8I | GTNNAC | 3 cut(s) | 307, 985, 1076 |
| Hpy99I | CGWCG | 5 cut(s) | 113, 194, 197, 272, 322 |
| HpyAV | CCTTC | 4 cut(s) | 658, 757, 817, 1015 |
| HpyCH4III | ACNGT | 2 cut(s) | 268, 527 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 5 cut(s) | 64, 135, 698, 1012, 1082 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 67, 90, 126, 153, 241, 252, 707 |
| HpyF3I | CTNAG | 2 cut(s) | 207, 1005 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| Hsp92I | GRCGYC | 2 cut(s) | 371, 1026 |
| Hsp92II | CATG | 4 cut(s) | 139, 241, 313, 908 |
| HspAI | GCGC | 3 cut(s) | 154, 244, 1002 |
| Ksp22I | TGATCA | 1 cut(s) | 919 |
| Kzo9I | GATC | 2 cut(s) | 786, 919 |
| LmnI | GCTCC | 3 cut(s) | 75, 232, 928 |
| Lsp1109I | GCAGC | 3 cut(s) | 48, 258, 710 |
| LweI | GCATC | 1 cut(s) | 264 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 2 cut(s) | 521, 827 |
| MalI | GATC | 2 cut(s) | 788, 921 |
| MbiI | CCGCTC | 1 cut(s) | 784 |
| MboI | GATC | 2 cut(s) | 786, 919 |
| MboII | GAAGA | 9 cut(s) | 19, 160, 448, 454, 610, 667, 743, 754, 865 |
| MhlI | GDGCHC | 1 cut(s) | 237 |
| MluCI | AATT | 2 cut(s) | 623, 951 |
| MlyI | GAGTC | 1 cut(s) | 409 |
| MroXI | GAANNNNTTC | 1 cut(s) | 14 |
| MseI | TTAA | 5 cut(s) | 423, 462, 756, 963, 1047 |
| MslI | CAYNNNNRTG | 1 cut(s) | 528 |
| MspA1I | CMGCKG | 1 cut(s) | 701 |
| MspI | CCGG | 3 cut(s) | 73, 348, 676 |
| MspR9I | CCNGG | 2 cut(s) | 676, 677 |
| Mva1269I | GAATGC | 1 cut(s) | 508 |
| MvnI | CGCG | 3 cut(s) | 38, 108, 189 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 67, 90, 126, 153, 241, 252, 707 |
| NciI | CCSGG | 2 cut(s) | 676, 677 |
| NdeII | GATC | 2 cut(s) | 786, 919 |
| NlaIII | CATG | 4 cut(s) | 139, 241, 313, 908 |
| NlaIV | GGNNCC | 1 cut(s) | 959 |
| NmuCI | GTSAC | 1 cut(s) | 521 |
| NruI | TCGCGA | 1 cut(s) | 38 |
| NspI | RCATGY | 1 cut(s) | 908 |
| NspV | TTCGAA | 1 cut(s) | 620 |
| OliI | CACNNNNGTG | 1 cut(s) | 528 |
| PciI | ACATGT | 1 cut(s) | 904 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 264, 276 |
| PctI | GAATGC | 1 cut(s) | 508 |
| PdmI | GAANNNNTTC | 1 cut(s) | 14 |
| PfeI | GAWTC | 3 cut(s) | 45, 407, 943 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 381 |
| PkrI | GCNGC | 5 cut(s) | 63, 107, 248, 262, 700 |
| PleI | GAGTC | 1 cut(s) | 409 |
| PpsI | GAGTC | 1 cut(s) | 409 |
| PscI | ACATGT | 1 cut(s) | 904 |
| PspN4I | GGNNCC | 1 cut(s) | 959 |
| PspPI | GGNCC | 1 cut(s) | 345 |
| PstI | CTGCAG | 1 cut(s) | 66 |
| RruI | TCGCGA | 1 cut(s) | 38 |
| RsaI | GTAC | 2 cut(s) | 80, 284 |
| RsaNI | GTAC | 2 cut(s) | 79, 283 |
| RseI | CAYNNNNRTG | 1 cut(s) | 528 |
| SaqAI | TTAA | 5 cut(s) | 423, 462, 756, 963, 1047 |
| SatI | GCNGC | 5 cut(s) | 62, 106, 247, 261, 699 |
| Sau3AI | GATC | 2 cut(s) | 786, 919 |
| Sau96I | GGNCC | 1 cut(s) | 345 |
| SchI | GAGTC | 1 cut(s) | 409 |
| ScrFI | CCNGG | 2 cut(s) | 676, 677 |
| SduI | GDGCHC | 1 cut(s) | 237 |
| SfaNI | GCATC | 1 cut(s) | 264 |
| SfcI | CTRYAG | 1 cut(s) | 62 |
| SfuI | TTCGAA | 1 cut(s) | 620 |
| SinI | GGWCC | 1 cut(s) | 345 |
| SmaI | CCCGGG | 1 cut(s) | 677 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 528 |
| SmlI | CTYRAG | 2 cut(s) | 910, 932 |
| SmoI | CTYRAG | 2 cut(s) | 910, 932 |
| Sse9I | AATT | 2 cut(s) | 623, 951 |
| SsiI | CCGC | 9 cut(s) | 106, 187, 253, 261, 295, 506, 701, 784, 818 |
| StyD4I | CCNGG | 2 cut(s) | 674, 675 |
| StyI | CCWWGG | 3 cut(s) | 27, 54, 375 |
| TaaI | ACNGT | 2 cut(s) | 268, 527 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TaqI | TCGA | 4 cut(s) | 195, 216, 317, 620 |
| TasI | AATT | 2 cut(s) | 623, 951 |
| TatI | WGTACW | 1 cut(s) | 282 |
| TauI | GCSGC | 2 cut(s) | 108, 263 |
| TfiI | GAWTC | 3 cut(s) | 45, 407, 943 |
| Tru1I | TTAA | 5 cut(s) | 423, 462, 756, 963, 1047 |
| Tru9I | TTAA | 5 cut(s) | 423, 462, 756, 963, 1047 |
| TscAI | CASTG | 2 cut(s) | 137, 987 |
| TseFI | GTSAC | 1 cut(s) | 521 |
| TseI | GCWGC | 3 cut(s) | 61, 246, 698 |
| Tsp45I | GTSAC | 1 cut(s) | 521 |
| TspDTI | ATGAA | 5 cut(s) | 154, 254, 326, 376, 455 |
| TspGWI | ACGGA | 2 cut(s) | 335, 1004 |
| TspMI | CCCGGG | 1 cut(s) | 675 |
| TspRI | CASTG | 2 cut(s) | 137, 987 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 381 |
| VpaK11BI | GGWCC | 1 cut(s) | 345 |
| XceI | RCATGY | 1 cut(s) | 908 |
| XmaI | CCCGGG | 1 cut(s) | 675 |
| XmnI | GAANNNNTTC | 1 cut(s) | 14 |