DNA RNA-binding protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C2H2-zf_KIN17 | PF25095 | 96 - 125 | 3.1e-20 | KIN17 C2H2-type zinc finger domain |
| WH_KIN17 | PF10357 | 131 - 249 | 2.2e-45 | KIN17 WH-like domain |
| KN17_SH3 | PF18131 | 348 - 401 | 1.8e-22 | KN17 SH3-like domain |
| GPKOW_C | PF25088 | 357 - 464 | 1.7e-15 | GPKOW C-terminal domain |
| SH3_KIN17_C | PF25092 | 410 - 466 | 1.9e-22 | KIN17 C-terminal SH3 domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1239 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 549 |
| AccBSI | CCGCTC | 1 cut(s) | 436 |
| AccI | GTMKAC | 2 cut(s) | 411, 1299 |
| AccII | CGCG | 1 cut(s) | 114 |
| AciI | CCGC | 7 cut(s) | 436, 460, 486, 520, 698, 707, 1295 |
| AclWI | GGATC | 1 cut(s) | 1282 |
| AcsI | RAATTY | 3 cut(s) | 31, 158, 538 |
| AcvI | CACGTG | 1 cut(s) | 529 |
| AcyI | GRCGYC | 2 cut(s) | 614, 978 |
| AdeI | CACNNNGTG | 1 cut(s) | 549 |
| AfaI | GTAC | 3 cut(s) | 296, 500, 509 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 549, 1235 |
| AgeI | ACCGGT | 1 cut(s) | 468 |
| AgsI | TTSAA | 7 cut(s) | 12, 184, 340, 679, 1169, 1178, 1217 |
| AjnI | CCWGG | 2 cut(s) | 832, 1203 |
| AleI | CACNNNNGTG | 1 cut(s) | 494 |
| AluBI | AGCT | 3 cut(s) | 286, 987, 1213 |
| AluI | AGCT | 3 cut(s) | 286, 987, 1213 |
| Alw26I | GTCTC | 4 cut(s) | 318, 605, 650, 923 |
| AlwI | GGATC | 1 cut(s) | 1282 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| AoxI | GGCC | 3 cut(s) | 267, 807, 990 |
| ApoI | RAATTY | 3 cut(s) | 31, 158, 538 |
| AseI | ATTAAT | 2 cut(s) | 48, 1038 |
| AsiGI | ACCGGT | 1 cut(s) | 468 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 230, 335 |
| AspA2I | CCTAGG | 1 cut(s) | 139 |
| AspLEI | GCGC | 3 cut(s) | 372, 856, 1319 |
| AspS9I | GGNCC | 2 cut(s) | 861, 875 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| AvaII | GGWCC | 2 cut(s) | 861, 875 |
| AvrII | CCTAGG | 1 cut(s) | 139 |
| BanI | GGYRCC | 1 cut(s) | 1239 |
| BbrPI | CACGTG | 1 cut(s) | 529 |
| BbsI | GAAGAC | 1 cut(s) | 683 |
| BbvCI | CCTCAGC | 1 cut(s) | 804 |
| BccI | CCATC | 4 cut(s) | 198, 285, 531, 956 |
| BceAI | ACGGC | 2 cut(s) | 462, 1352 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 279, 313 |
| BciT130I | CCWGG | 2 cut(s) | 834, 1205 |
| BclI | TGATCA | 1 cut(s) | 787 |
| BcoDI | GTCTC | 4 cut(s) | 318, 605, 650, 923 |
| BfaI | CTAG | 1 cut(s) | 140 |
| BfoI | RGCGCY | 1 cut(s) | 373 |
| BglII | AGATCT | 1 cut(s) | 381 |
| BisI | GCNGC | 1 cut(s) | 486 |
| BlnI | CCTAGG | 1 cut(s) | 139 |
| BlpI | GCTNAGC | 1 cut(s) | 1209 |
| BlsI | GCNGC | 1 cut(s) | 487 |
| Bme1390I | CCNGG | 2 cut(s) | 834, 1205 |
| Bme18I | GGWCC | 2 cut(s) | 861, 875 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmgT120I | GGNCC | 2 cut(s) | 861, 875 |
| BmiI | GGNNCC | 6 cut(s) | 137, 464, 831, 862, 876, 1241 |
| BmrFI | CCNGG | 2 cut(s) | 834, 1205 |
| BmrI | ACTGGG | 2 cut(s) | 600, 881 |
| BmsI | GCATC | 2 cut(s) | 366, 414 |
| BmuI | ACTGGG | 2 cut(s) | 600, 881 |
| BpiI | GAAGAC | 1 cut(s) | 683 |
| BpmI | CTGGAG | 1 cut(s) | 263 |
| Bpu10I | CCTNAGC | 2 cut(s) | 804, 1320 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1209 |
| BpuEI | CTTGAG | 1 cut(s) | 1213 |
| BsaAI | YACGTR | 2 cut(s) | 529, 636 |
| BsaBI | GATNNNNATC | 1 cut(s) | 380 |
| BsaHI | GRCGYC | 2 cut(s) | 614, 978 |
| BsaJI | CCNNGG | 6 cut(s) | 139, 270, 423, 833, 993, 1095 |
| BsaWI | WCCGGW | 2 cut(s) | 132, 468 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 549, 1235 |
| Bse118I | RCCGGY | 2 cut(s) | 468, 769 |
| Bse1I | ACTGG | 2 cut(s) | 595, 876 |
| Bse3DI | GCAATG | 1 cut(s) | 323 |
| Bse8I | GATNNNNATC | 1 cut(s) | 380 |
| BseBI | CCWGG | 2 cut(s) | 834, 1205 |
| BseDI | CCNNGG | 6 cut(s) | 139, 270, 423, 833, 993, 1095 |
| BseGI | GGATG | 3 cut(s) | 190, 715, 931 |
| BseJI | GATNNNNATC | 1 cut(s) | 380 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 549, 1235 |
| BseMI | GCAATG | 1 cut(s) | 323 |
| BseMII | CTCAG | 3 cut(s) | 555, 795, 1200 |
| BseNI | ACTGG | 2 cut(s) | 595, 876 |
| BseRI | GAGGAG | 5 cut(s) | 440, 728, 1013, 1028, 1031 |
| BsgI | GTGCAG | 1 cut(s) | 1346 |
| Bsh1236I | CGCG | 1 cut(s) | 114 |
| Bsh1285I | CGRYCG | 2 cut(s) | 520, 1299 |
| BshFI | GGCC | 3 cut(s) | 269, 809, 992 |
| BshNI | GGYRCC | 1 cut(s) | 1239 |
| BshTI | ACCGGT | 1 cut(s) | 468 |
| BsiEI | CGRYCG | 2 cut(s) | 520, 1299 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BsiSI | CCGG | 3 cut(s) | 133, 469, 770 |
| BslFI | GGGAC | 2 cut(s) | 288, 888 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 549, 1235 |
| BsmAI | GTCTC | 4 cut(s) | 318, 605, 650, 923 |
| BsmBI | CGTCTC | 4 cut(s) | 318, 605, 650, 923 |
| BsmFI | GGGAC | 2 cut(s) | 288, 888 |
| BsnI | GGCC | 3 cut(s) | 269, 809, 992 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| Bsp1407I | TGTACA | 1 cut(s) | 498 |
| Bsp143I | GATC | 5 cut(s) | 21, 381, 643, 787, 1274 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1209 |
| Bsp68I | TCGCGA | 1 cut(s) | 114 |
| BspACI | CCGC | 7 cut(s) | 436, 460, 486, 520, 698, 707, 1295 |
| BspANI | GGCC | 3 cut(s) | 269, 809, 992 |
| BspCNI | CTCAG | 3 cut(s) | 556, 796, 1201 |
| BspFNI | CGCG | 1 cut(s) | 114 |
| BspLI | GGNNCC | 6 cut(s) | 137, 464, 831, 862, 876, 1241 |
| BspPI | GGATC | 1 cut(s) | 1282 |
| BspT107I | GGYRCC | 1 cut(s) | 1239 |
| BsrBI | CCGCTC | 1 cut(s) | 436 |
| BsrDI | GCAATG | 1 cut(s) | 323 |
| BsrFI | RCCGGY | 2 cut(s) | 468, 769 |
| BsrGI | TGTACA | 1 cut(s) | 498 |
| BsrI | ACTGG | 2 cut(s) | 595, 876 |
| BssAI | RCCGGY | 2 cut(s) | 468, 769 |
| BssECI | CCNNGG | 6 cut(s) | 139, 270, 423, 833, 993, 1095 |
| BssMI | GATC | 5 cut(s) | 21, 381, 643, 787, 1274 |
| BssNI | GRCGYC | 2 cut(s) | 614, 978 |
| BssT1I | CCWWGG | 4 cut(s) | 139, 270, 993, 1095 |
| Bst2UI | CCWGG | 2 cut(s) | 834, 1205 |
| Bst4CI | ACNGT | 4 cut(s) | 416, 493, 1222, 1352 |
| BstACI | GRCGYC | 2 cut(s) | 614, 978 |
| BstAUI | TGTACA | 1 cut(s) | 498 |
| BstBAI | YACGTR | 2 cut(s) | 529, 636 |
| BstC8I | GCNNGC | 1 cut(s) | 1184 |
| BstDEI | CTNAG | 4 cut(s) | 564, 804, 1209, 1320 |
| BstF5I | GGATG | 3 cut(s) | 190, 715, 931 |
| BstFNI | CGCG | 1 cut(s) | 114 |
| BstH2I | RGCGCY | 1 cut(s) | 373 |
| BstHHI | GCGC | 3 cut(s) | 372, 856, 1319 |
| BstKTI | GATC | 5 cut(s) | 24, 384, 646, 790, 1277 |
| BstMAI | GTCTC | 4 cut(s) | 318, 605, 650, 923 |
| BstMBI | GATC | 5 cut(s) | 21, 381, 643, 787, 1274 |
| BstMCI | CGRYCG | 2 cut(s) | 520, 1299 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 306, 369, 376, 704 |
| BstNI | CCWGG | 2 cut(s) | 834, 1205 |
| BstNSI | RCATGY | 1 cut(s) | 1190 |
| BstSCI | CCNGG | 2 cut(s) | 832, 1203 |
| BstSNI | TACGTA | 1 cut(s) | 636 |
| BstUI | CGCG | 1 cut(s) | 114 |
| BstV2I | GAAGAC | 1 cut(s) | 683 |
| BstX2I | RGATCY | 1 cut(s) | 381 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 988 |
| BstYI | RGATCY | 1 cut(s) | 381 |
| BsuRI | GGCC | 3 cut(s) | 269, 809, 992 |
| BtsCI | GGATG | 3 cut(s) | 190, 715, 931 |
| BtsI | GCAGTG | 2 cut(s) | 346, 979 |
| BtsIMutI | CAGTG | 2 cut(s) | 346, 979 |
| BtuMI | TCGCGA | 1 cut(s) | 114 |
| Cac8I | GCNNGC | 1 cut(s) | 1184 |
| CfoI | GCGC | 3 cut(s) | 372, 856, 1319 |
| Cfr10I | RCCGGY | 2 cut(s) | 468, 769 |
| Cfr13I | GGNCC | 2 cut(s) | 861, 875 |
| CseI | GACGC | 6 cut(s) | 98, 565, 622, 667, 677, 986 |
| Csp6I | GTAC | 3 cut(s) | 295, 499, 508 |
| CspAI | ACCGGT | 1 cut(s) | 468 |
| CviAII | CATG | 3 cut(s) | 217, 352, 1187 |
| CviQI | GTAC | 3 cut(s) | 295, 499, 508 |
| DdeI | CTNAG | 4 cut(s) | 564, 804, 1209, 1320 |
| DpnI | GATC | 5 cut(s) | 23, 383, 645, 789, 1276 |
| DpnII | GATC | 5 cut(s) | 21, 381, 643, 787, 1274 |
| DraI | TTTAAA | 2 cut(s) | 30, 81 |
| DraIII | CACNNNGTG | 1 cut(s) | 549 |
| EciI | GGCGGA | 2 cut(s) | 713, 722 |
| Eco105I | TACGTA | 1 cut(s) | 636 |
| Eco130I | CCWWGG | 4 cut(s) | 139, 270, 993, 1095 |
| Eco47I | GGWCC | 2 cut(s) | 861, 875 |
| Eco72I | CACGTG | 1 cut(s) | 529 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| EcoO109I | RGGNCCY | 2 cut(s) | 861, 875 |
| EcoRI | GAATTC | 1 cut(s) | 538 |
| EcoRII | CCWGG | 2 cut(s) | 832, 1203 |
| EcoT14I | CCWWGG | 4 cut(s) | 139, 270, 993, 1095 |
| ErhI | CCWWGG | 4 cut(s) | 139, 270, 993, 1095 |
| Esp3I | CGTCTC | 4 cut(s) | 318, 605, 650, 923 |
| FaeI | CATG | 3 cut(s) | 220, 355, 1190 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1175, 1207 |
| FaqI | GGGAC | 2 cut(s) | 288, 888 |
| FatI | CATG | 3 cut(s) | 216, 351, 1186 |
| FauNDI | CATATG | 1 cut(s) | 534 |
| FbaI | TGATCA | 1 cut(s) | 787 |
| FblI | GTMKAC | 2 cut(s) | 411, 1299 |
| Fnu4HI | GCNGC | 1 cut(s) | 486 |
| FokI | GGATG | 3 cut(s) | 177, 722, 938 |
| Fsp4HI | GCNGC | 1 cut(s) | 486 |
| FspBI | CTAG | 1 cut(s) | 140 |
| GlaI | GCGC | 3 cut(s) | 371, 855, 1318 |
| GluI | GCNGC | 1 cut(s) | 486 |
| GsuI | CTGGAG | 1 cut(s) | 263 |
| HaeII | RGCGCY | 1 cut(s) | 373 |
| HaeIII | GGCC | 3 cut(s) | 269, 809, 992 |
| HapII | CCGG | 3 cut(s) | 133, 469, 770 |
| HgaI | GACGC | 6 cut(s) | 98, 565, 622, 667, 677, 986 |
| HhaI | GCGC | 3 cut(s) | 372, 856, 1319 |
| Hin1I | GRCGYC | 2 cut(s) | 614, 978 |
| Hin1II | CATG | 3 cut(s) | 220, 355, 1190 |
| Hin6I | GCGC | 3 cut(s) | 370, 854, 1317 |
| HinP1I | GCGC | 3 cut(s) | 370, 854, 1317 |
| HincII | GTYRAC | 4 cut(s) | 412, 607, 1201, 1300 |
| HindII | GTYRAC | 4 cut(s) | 412, 607, 1201, 1300 |
| HindIII | AAGCTT | 1 cut(s) | 985 |
| HinfI | GANTC | 7 cut(s) | 261, 276, 336, 650, 1068, 1225, 1231 |
| HpaII | CCGG | 3 cut(s) | 133, 469, 770 |
| Hpy166II | GTNNAC | 6 cut(s) | 412, 499, 607, 1201, 1300, 1391 |
| Hpy188I | TCNGA | 5 cut(s) | 290, 655, 787, 799, 1230 |
| Hpy188III | TCNNGA | 7 cut(s) | 113, 280, 446, 571, 647, 815, 1192 |
| Hpy8I | GTNNAC | 6 cut(s) | 412, 499, 607, 1201, 1300, 1391 |
| Hpy99I | CGWCG | 5 cut(s) | 114, 413, 416, 497, 559 |
| HpyAV | CCTTC | 6 cut(s) | 238, 613, 946, 1021, 1039, 1330 |
| HpyCH4III | ACNGT | 4 cut(s) | 416, 493, 1222, 1352 |
| HpyCH4IV | ACGT | 2 cut(s) | 528, 635 |
| HpyCH4V | TGCA | 6 cut(s) | 321, 351, 379, 532, 1283, 1327 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 306, 369, 376, 704 |
| HpyF3I | CTNAG | 4 cut(s) | 564, 804, 1209, 1320 |
| HpySE526I | ACGT | 2 cut(s) | 528, 635 |
| Hsp92I | GRCGYC | 2 cut(s) | 614, 978 |
| Hsp92II | CATG | 3 cut(s) | 220, 355, 1190 |
| HspAI | GCGC | 3 cut(s) | 370, 854, 1317 |
| Ksp22I | TGATCA | 1 cut(s) | 787 |
| Kzo9I | GATC | 5 cut(s) | 21, 381, 643, 787, 1274 |
| LmnI | GCTCC | 5 cut(s) | 106, 135, 291, 462, 829 |
| LweI | GCATC | 2 cut(s) | 366, 414 |
| MaeI | CTAG | 1 cut(s) | 140 |
| MaeII | ACGT | 2 cut(s) | 528, 635 |
| MaeIII | GTNAC | 3 cut(s) | 416, 974, 1109 |
| MalI | GATC | 5 cut(s) | 23, 383, 645, 789, 1276 |
| MbiI | CCGCTC | 1 cut(s) | 436 |
| MboI | GATC | 5 cut(s) | 21, 381, 643, 787, 1274 |
| MboII | GAAGA | 6 cut(s) | 376, 683, 691, 1033, 1036, 1261 |
| MflI | RGATCY | 1 cut(s) | 381 |
| MluCI | AATT | 9 cut(s) | 15, 31, 45, 158, 179, 195, 538, 824, 902 |
| MlyI | GAGTC | 1 cut(s) | 270 |
| MroXI | GAANNNNTTC | 2 cut(s) | 230, 335 |
| MslI | CAYNNNNRTG | 1 cut(s) | 494 |
| MspI | CCGG | 3 cut(s) | 133, 469, 770 |
| MspR9I | CCNGG | 2 cut(s) | 834, 1205 |
| MvaI | CCWGG | 2 cut(s) | 834, 1205 |
| MvnI | CGCG | 1 cut(s) | 114 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 306, 369, 376, 704 |
| NdeI | CATATG | 1 cut(s) | 534 |
| NdeII | GATC | 5 cut(s) | 21, 381, 643, 787, 1274 |
| NlaIII | CATG | 3 cut(s) | 220, 355, 1190 |
| NlaIV | GGNNCC | 6 cut(s) | 137, 464, 831, 862, 876, 1241 |
| NmuCI | GTSAC | 1 cut(s) | 974 |
| NruI | TCGCGA | 1 cut(s) | 114 |
| NspI | RCATGY | 1 cut(s) | 1190 |
| OliI | CACNNNNGTG | 1 cut(s) | 494 |
| PaeR7I | CTCGAG | 1 cut(s) | 119 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 420, 489, 501 |
| PdmI | GAANNNNTTC | 2 cut(s) | 230, 335 |
| PfeI | GAWTC | 6 cut(s) | 261, 336, 650, 1068, 1225, 1231 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 549 |
| PinAI | ACCGGT | 1 cut(s) | 468 |
| PkrI | GCNGC | 1 cut(s) | 487 |
| PleI | GAGTC | 1 cut(s) | 270 |
| PmaCI | CACGTG | 1 cut(s) | 529 |
| PmlI | CACGTG | 1 cut(s) | 529 |
| PpsI | GAGTC | 1 cut(s) | 270 |
| Ppu21I | YACGTR | 2 cut(s) | 529, 636 |
| PpuMI | RGGWCCY | 2 cut(s) | 861, 875 |
| PshBI | ATTAAT | 2 cut(s) | 48, 1038 |
| Psp5II | RGGWCCY | 2 cut(s) | 861, 875 |
| Psp6I | CCWGG | 2 cut(s) | 832, 1203 |
| PspCI | CACGTG | 1 cut(s) | 529 |
| PspGI | CCWGG | 2 cut(s) | 832, 1203 |
| PspN4I | GGNNCC | 6 cut(s) | 137, 464, 831, 862, 876, 1241 |
| PspPI | GGNCC | 2 cut(s) | 861, 875 |
| PspPPI | RGGWCCY | 2 cut(s) | 861, 875 |
| PspXI | VCTCGAGB | 1 cut(s) | 119 |
| PsuI | RGATCY | 1 cut(s) | 381 |
| RruI | TCGCGA | 1 cut(s) | 114 |
| RsaI | GTAC | 3 cut(s) | 296, 500, 509 |
| RsaNI | GTAC | 3 cut(s) | 295, 499, 508 |
| RseI | CAYNNNNRTG | 1 cut(s) | 494 |
| SalI | GTCGAC | 2 cut(s) | 410, 1298 |
| SatI | GCNGC | 1 cut(s) | 486 |
| Sau3AI | GATC | 5 cut(s) | 21, 381, 643, 787, 1274 |
| Sau96I | GGNCC | 2 cut(s) | 861, 875 |
| SchI | GAGTC | 1 cut(s) | 270 |
| ScrFI | CCNGG | 2 cut(s) | 834, 1205 |
| SfaNI | GCATC | 2 cut(s) | 366, 414 |
| Sfr274I | CTCGAG | 1 cut(s) | 119 |
| SgrDI | CGTCGACG | 1 cut(s) | 410 |
| SinI | GGWCC | 2 cut(s) | 861, 875 |
| SlaI | CTCGAG | 1 cut(s) | 119 |
| SmiI | ATTTAAAT | 1 cut(s) | 30 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 494 |
| SmlI | CTYRAG | 2 cut(s) | 119, 1192 |
| SmoI | CTYRAG | 2 cut(s) | 119, 1192 |
| SnaBI | TACGTA | 1 cut(s) | 636 |
| Sse9I | AATT | 9 cut(s) | 15, 31, 45, 158, 179, 195, 538, 824, 902 |
| SsiI | CCGC | 7 cut(s) | 436, 460, 486, 520, 698, 707, 1295 |
| SspMI | CTAG | 1 cut(s) | 140 |
| StyD4I | CCNGG | 2 cut(s) | 832, 1203 |
| StyI | CCWWGG | 4 cut(s) | 139, 270, 993, 1095 |
| SwaI | ATTTAAAT | 1 cut(s) | 30 |
| TaaI | ACNGT | 4 cut(s) | 416, 493, 1222, 1352 |
| TaiI | ACGT | 2 cut(s) | 531, 638 |
| TaqI | TCGA | 8 cut(s) | 91, 120, 259, 411, 432, 866, 912, 1299 |
| TasI | AATT | 9 cut(s) | 15, 31, 45, 158, 179, 195, 538, 824, 902 |
| TatI | WGTACW | 2 cut(s) | 498, 507 |
| TauI | GCSGC | 1 cut(s) | 488 |
| TfiI | GAWTC | 6 cut(s) | 261, 336, 650, 1068, 1225, 1231 |
| TscAI | CASTG | 2 cut(s) | 353, 979 |
| TseFI | GTSAC | 1 cut(s) | 974 |
| Tsp45I | GTSAC | 1 cut(s) | 974 |
| TspDTI | ATGAA | 3 cut(s) | 470, 551, 619 |
| TspGWI | ACGGA | 1 cut(s) | 348 |
| TspRI | CASTG | 2 cut(s) | 353, 979 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 549 |
| VpaK11BI | GGWCC | 2 cut(s) | 861, 875 |
| VspI | ATTAAT | 2 cut(s) | 48, 1038 |
| XapI | RAATTY | 3 cut(s) | 31, 158, 538 |
| XceI | RCATGY | 1 cut(s) | 1190 |
| XhoI | CTCGAG | 1 cut(s) | 119 |
| XmaJI | CCTAGG | 1 cut(s) | 139 |
| XmiI | GTMKAC | 2 cut(s) | 411, 1299 |
| XmnI | GAANNNNTTC | 2 cut(s) | 230, 335 |
| XspI | CTAG | 1 cut(s) | 140 |