MD08G1224700.v1.1
BZIP Family

G-box-binding factor 4-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
28973636 .. 28979021
5386 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1224700.v1.1.491

Sequence Viewer

Length: 894 bp
ATGGCGACGTCTTCGAAAATGGCGGTGGTTTCAACCGCGAATTCGGATCTGCCGCGGAGGGAGTCGTCTATATGTTCACTCTCCACTTTTCTGGCCGACGACGACGACAACCGTCACCACAAGCACCAATCCATGACCATGGACGACATCCTCAGGAACATCTACAGCTCCACCGGGACTGGCACCGGAAATGACATGCACGACAACGGTCACCATCAACAACTTCATCATCACGCCGAGGCCAGGTCCGTCGACGAGGTCTGGAAGGAGATCGTCGCCGGAGGAGCTGGAGTGGGAGTGGGAGAGGAGGAGGTGGGAGTGGCGGAGGGAGATGGCGGGGATCAGGTGCGGGGAGGAGAGGGAGGAGGTGGTGGTGGGGGTGGGATGGAGGAGATGACCTTGGAGGACTTTCTCACCAGGGCTGGGGCCGTGAGGGAAGAGGACGTCAGCGTGAATGCCGGCGGAGTTCCGATTGGGTACGGGCAGTTCCAGGTGCAGCCTCCTCCTCCACCTCCGGCTGCTCAGGGTCAGCTGGTGTACGCGAACGGGACAACAAGTGCCAGCGGAGGCGGAGGTGGTGGTGGTGGAGGAGGGAGGGCTGGGAAGAGGAGAGCCGTGCAGGAAGCTCCACTCGATAAGGCAACGCAGCAGAAGCAGAGGAGGATGATCAAGAACAGAGAGTCCGCTGCCCGGTCCAGGGAACGGAAGCAGGCTTACACCGTAGAGCTCGAATCTCTGGTAACGCAGCTGGAGGAGGAAAATGCGCGGCTCCTCAGACAACAGGCTGAGCAAAAGAAGGCGAGGTTTAAGCAGCTCATGGAGAACCTCATTCCTGTTGTAGAGAAGCGGAGGCCACCACATGTTCTTCGGAGAGTACATTCGGTGCACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

298

Amino Acids

31.89

Weight (kDa)

6.32

Isoelectric Point (pI)

62.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 215 - 270 6.4e-12 bZIP transcription factor
bZIP_2 PF07716 216 - 266 5.3e-11 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 11, 447
AccB1I GGYRCC 1 cut(s) 182
AccI GTMKAC 1 cut(s) 252
AccII CGCG 4 cut(s) 38, 55, 542, 766
AclWI GGATC 2 cut(s) 54, 348
AcoI YGGCCR 1 cut(s) 93
AcsI RAATTY 1 cut(s) 40
AcyI GRCGYC 2 cut(s) 8, 444
AfaI GTAC 3 cut(s) 479, 539, 876
AfiI CCNNNNNNNGG 6 cut(s) 243, 423, 690, 696, 697, 702
AflIII ACRYGT 1 cut(s) 859
AgsI TTSAA 1 cut(s) 33
AjnI CCWGG 4 cut(s) 242, 416, 489, 695
AloI GAACNNNNNNTCC 2 cut(s) 665, 697
AluBI AGCT 7 cut(s) 168, 287, 532, 626, 727, 748, 814
AluI AGCT 7 cut(s) 168, 287, 532, 626, 727, 748, 814
Alw21I GWGCWC 2 cut(s) 729, 888
Alw44I GTGCAC 1 cut(s) 884
AlwI GGATC 2 cut(s) 54, 348
AoxI GGCC 4 cut(s) 93, 240, 426, 851
ApaLI GTGCAC 1 cut(s) 884
ApeKI GCWGC 6 cut(s) 496, 518, 646, 686, 745, 811
ApoI RAATTY 1 cut(s) 40
AspLEI GCGC 1 cut(s) 766
AspS9I GGNCC 3 cut(s) 246, 426, 693
AsuC2I CCSGG 2 cut(s) 175, 691
AsuHPI GGTGA 3 cut(s) 107, 203, 406
AsuII TTCGAA 1 cut(s) 14
AvaII GGWCC 2 cut(s) 246, 693
AxyI CCTNAGG 1 cut(s) 152
BaeGI GKGCMC 1 cut(s) 888
BanI GGYRCC 1 cut(s) 182
BanII GRGCYC 1 cut(s) 729
BarI GAAGNNNNNNTAC 2 cut(s) 698, 730
BbsI GAAGAC 1 cut(s) 3
Bbv12I GWGCWC 2 cut(s) 729, 888
BbvI GCAGC 6 cut(s) 505, 508, 658, 673, 757, 823
BccI CCATC 3 cut(s) 222, 326, 379
BceAI ACGGC 2 cut(s) 413, 599
BciT130I CCWGG 4 cut(s) 244, 418, 491, 697
BclI TGATCA 1 cut(s) 666
BcnI CCSGG 2 cut(s) 175, 691
BfmI CTRYAG 1 cut(s) 163
BisI GCNGC 8 cut(s) 53, 497, 519, 647, 687, 746, 767, 812
BlpI GCTNAGC 1 cut(s) 786
BlsI GCNGC 8 cut(s) 54, 498, 520, 648, 688, 747, 768, 813
Bme1390I CCNGG 6 cut(s) 175, 244, 418, 491, 691, 697
Bme18I GGWCC 2 cut(s) 246, 693
BmgT120I GGNCC 3 cut(s) 246, 426, 693
BmiI GGNNCC 3 cut(s) 184, 427, 770
BmrFI CCNGG 6 cut(s) 175, 244, 418, 491, 691, 697
BoxI GACNNNNGTC 2 cut(s) 111, 207
BpiI GAAGAC 1 cut(s) 3
BpmI CTGGAG 2 cut(s) 309, 770
Bpu10I CCTNAGC 1 cut(s) 522
Bpu1102I GCTNAGC 1 cut(s) 786
Bpu14I TTCGAA 1 cut(s) 14
BpuMI CCSGG 2 cut(s) 175, 691
BsaHI GRCGYC 2 cut(s) 8, 444
BsaJI CCNNGG 6 cut(s) 53, 138, 237, 399, 417, 696
BsaWI WCCGGW 1 cut(s) 185
BsaXI ACNNNNNCTCC 4 cut(s) 276, 282, 306, 312
Bsc4I CCNNNNNNNGG 6 cut(s) 243, 423, 690, 696, 697, 702
Bse118I RCCGGY 1 cut(s) 458
Bse1I ACTGG 2 cut(s) 184, 893
Bse21I CCTNAGG 1 cut(s) 152
BseBI CCWGG 4 cut(s) 244, 418, 491, 697
BseDI CCNNGG 6 cut(s) 53, 138, 237, 399, 417, 696
BseGI GGATG 3 cut(s) 147, 390, 669
BseLI CCNNNNNNNGG 6 cut(s) 243, 423, 690, 696, 697, 702
BseMII CTCAG 4 cut(s) 166, 536, 777, 787
BseNI ACTGG 2 cut(s) 184, 893
BseSI GKGCMC 1 cut(s) 888
BseXI GCAGC 6 cut(s) 505, 508, 658, 673, 757, 823
BseYI CCCAGC 2 cut(s) 422, 599
BsgI GTGCAG 2 cut(s) 515, 638
Bsh1236I CGCG 4 cut(s) 38, 55, 542, 766
BshFI GGCC 4 cut(s) 95, 242, 428, 853
BshNI GGYRCC 1 cut(s) 182
BsiHKAI GWGCWC 2 cut(s) 729, 888
BsiSI CCGG 6 cut(s) 174, 186, 279, 459, 515, 691
BslFI GGGAC 2 cut(s) 190, 562
BslI CCNNNNNNNGG 6 cut(s) 243, 423, 690, 696, 697, 702
BsmFI GGGAC 2 cut(s) 190, 562
BsmI GAATGC 1 cut(s) 460
BsnI GGCC 4 cut(s) 95, 242, 428, 853
Bsp119I TTCGAA 1 cut(s) 14
Bsp1286I GDGCHC 2 cut(s) 729, 888
Bsp143I GATC 4 cut(s) 46, 270, 340, 666
Bsp1720I GCTNAGC 1 cut(s) 786
Bsp19I CCATGG 1 cut(s) 138
BspANI GGCC 4 cut(s) 95, 242, 428, 853
BspCNI CTCAG 4 cut(s) 165, 535, 778, 786
BspFNI CGCG 4 cut(s) 38, 55, 542, 766
BspLI GGNNCC 3 cut(s) 184, 427, 770
BspPI GGATC 2 cut(s) 54, 348
BspT104I TTCGAA 1 cut(s) 14
BspT107I GGYRCC 1 cut(s) 182
BsrFI RCCGGY 1 cut(s) 458
BsrI ACTGG 2 cut(s) 184, 893
BssAI RCCGGY 1 cut(s) 458
BssECI CCNNGG 6 cut(s) 53, 138, 237, 399, 417, 696
BssMI GATC 4 cut(s) 46, 270, 340, 666
BssNI GRCGYC 2 cut(s) 8, 444
BssT1I CCWWGG 2 cut(s) 138, 399
Bst2UI CCWGG 4 cut(s) 244, 418, 491, 697
Bst4CI ACNGT 3 cut(s) 113, 209, 721
Bst6I CTCTTC 2 cut(s) 432, 599
BstACI GRCGYC 2 cut(s) 8, 444
BstBI TTCGAA 1 cut(s) 14
BstC8I GCNNGC 3 cut(s) 460, 562, 711
BstDEI CTNAG 4 cut(s) 152, 522, 773, 786
BstDSI CCRYGG 2 cut(s) 53, 138
BstEII GGTNACC 1 cut(s) 209
BstF5I GGATG 3 cut(s) 147, 390, 669
BstFNI CGCG 4 cut(s) 38, 55, 542, 766
BstHHI GCGC 1 cut(s) 766
BstKTI GATC 4 cut(s) 49, 273, 343, 669
BstMBI GATC 4 cut(s) 46, 270, 340, 666
BstMWI GCNNNNNNNGC 2 cut(s) 284, 652
BstNI CCWGG 4 cut(s) 244, 418, 491, 697
BstNSI RCATGY 2 cut(s) 199, 863
BstPAI GACNNNNGTC 2 cut(s) 111, 207
BstPI GGTNACC 1 cut(s) 209
BstSCI CCNGG 6 cut(s) 173, 242, 416, 489, 689, 695
BstSFI CTRYAG 1 cut(s) 163
BstSLI GKGCMC 1 cut(s) 888
BstUI CGCG 4 cut(s) 38, 55, 542, 766
BstV1I GCAGC 6 cut(s) 505, 508, 658, 673, 757, 823
BstV2I GAAGAC 1 cut(s) 3
BstX2I RGATCY 1 cut(s) 46
BstXI CCANNNNNNTGG 2 cut(s) 91, 139
BstYI RGATCY 1 cut(s) 46
Bsu36I CCTNAGG 1 cut(s) 152
BsuRI GGCC 4 cut(s) 95, 242, 428, 853
BtgI CCRYGG 2 cut(s) 53, 138
BtsCI GGATG 3 cut(s) 147, 390, 669
BtsIMutI CAGTG 1 cut(s) 886
Cac8I GCNNGC 3 cut(s) 460, 562, 711
CfoI GCGC 1 cut(s) 766
Cfr10I RCCGGY 1 cut(s) 458
Cfr13I GGNCC 3 cut(s) 246, 426, 693
Cfr42I CCGCGG 1 cut(s) 56
Csp6I GTAC 3 cut(s) 478, 538, 875
CviAII CATG 5 cut(s) 133, 139, 196, 817, 860
CviQI GTAC 3 cut(s) 478, 538, 875
DdeI CTNAG 4 cut(s) 152, 522, 773, 786
DpnI GATC 4 cut(s) 48, 272, 342, 668
DpnII GATC 4 cut(s) 46, 270, 340, 666
EaeI YGGCCR 1 cut(s) 93
Eam1104I CTCTTC 2 cut(s) 432, 599
EarI CTCTTC 2 cut(s) 432, 599
EciI GGCGGA 3 cut(s) 338, 477, 585
Ecl136II GAGCTC 1 cut(s) 727
Eco130I CCWWGG 2 cut(s) 138, 399
Eco24I GRGCYC 1 cut(s) 729
Eco47I GGWCC 2 cut(s) 246, 693
Eco53kI GAGCTC 1 cut(s) 727
Eco81I CCTNAGG 1 cut(s) 152
Eco91I GGTNACC 1 cut(s) 209
EcoICRI GAGCTC 1 cut(s) 727
EcoO65I GGTNACC 1 cut(s) 209
EcoRI GAATTC 1 cut(s) 40
EcoRII CCWGG 4 cut(s) 242, 416, 489, 695
EcoT14I CCWWGG 2 cut(s) 138, 399
EcoT38I GRGCYC 1 cut(s) 729
ErhI CCWWGG 2 cut(s) 138, 399
FaeI CATG 5 cut(s) 136, 142, 199, 820, 863
FaiI YATR 7 cut(s) 71, 73, 134, 140, 197, 818, 861
FaqI GGGAC 2 cut(s) 190, 562
FatI CATG 5 cut(s) 132, 138, 195, 816, 859
FauI CCCGC 2 cut(s) 329, 342
FbaI TGATCA 1 cut(s) 666
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 8 cut(s) 53, 497, 519, 647, 687, 746, 767, 812
FokI GGATG 3 cut(s) 134, 397, 676
FriOI GRGCYC 1 cut(s) 729
Fsp4HI GCNGC 8 cut(s) 53, 497, 519, 647, 687, 746, 767, 812
GlaI GCGC 1 cut(s) 765
GluI GCNGC 8 cut(s) 53, 497, 519, 647, 687, 746, 767, 812
GsaI CCCAGC 2 cut(s) 426, 603
GsuI CTGGAG 2 cut(s) 309, 770
HaeIII GGCC 4 cut(s) 95, 242, 428, 853
HapII CCGG 6 cut(s) 174, 186, 279, 459, 515, 691
HhaI GCGC 1 cut(s) 766
Hin1I GRCGYC 2 cut(s) 8, 444
Hin1II CATG 5 cut(s) 136, 142, 199, 820, 863
Hin6I GCGC 1 cut(s) 764
HinP1I GCGC 1 cut(s) 764
HincII GTYRAC 1 cut(s) 253
HindII GTYRAC 1 cut(s) 253
HinfI GANTC 3 cut(s) 62, 680, 731
HpaII CCGG 6 cut(s) 174, 186, 279, 459, 515, 691
HphI GGTGA 3 cut(s) 107, 203, 406
Hpy166II GTNNAC 4 cut(s) 77, 253, 538, 886
Hpy188I TCNGA 4 cut(s) 46, 471, 776, 870
Hpy188III TCNNGA 3 cut(s) 154, 262, 670
Hpy8I GTNNAC 4 cut(s) 77, 253, 538, 886
Hpy99I CGWCG 7 cut(s) 10, 101, 104, 107, 254, 257, 278
HpyAV CCTTC 2 cut(s) 259, 790
HpyCH4III ACNGT 3 cut(s) 113, 209, 721
HpyCH4IV ACGT 2 cut(s) 8, 444
HpyCH4V TGCA 4 cut(s) 199, 496, 619, 886
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 652
HpyF3I CTNAG 4 cut(s) 152, 522, 773, 786
HpySE526I ACGT 2 cut(s) 8, 444
Hsp92I GRCGYC 2 cut(s) 8, 444
Hsp92II CATG 5 cut(s) 136, 142, 199, 820, 863
HspAI GCGC 1 cut(s) 764
KroI GCCGGC 1 cut(s) 458
KroNI GCCGGC 1 cut(s) 460
Ksp22I TGATCA 1 cut(s) 666
KspI CCGCGG 1 cut(s) 56
Kzo9I GATC 4 cut(s) 46, 270, 340, 666
LmnI GCTCC 4 cut(s) 173, 284, 631, 774
Lsp1109I GCAGC 6 cut(s) 505, 508, 658, 673, 757, 823
MaeII ACGT 2 cut(s) 8, 444
MaeIII GTNAC 3 cut(s) 113, 209, 739
MalI GATC 4 cut(s) 48, 272, 342, 668
MboI GATC 4 cut(s) 46, 270, 340, 666
MboII GAAGA 4 cut(s) 3, 449, 616, 857
MflI RGATCY 1 cut(s) 46
MhlI GDGCHC 2 cut(s) 729, 888
MluCI AATT 1 cut(s) 40
MlyI GAGTC 2 cut(s) 71, 689
MroNI GCCGGC 1 cut(s) 458
MseI TTAA 1 cut(s) 807
MslI CAYNNNNRTG 1 cut(s) 137
MspA1I CMGCKG 5 cut(s) 55, 532, 564, 686, 748
MspI CCGG 6 cut(s) 174, 186, 279, 459, 515, 691
MspR9I CCNGG 6 cut(s) 175, 244, 418, 491, 691, 697
Mva1269I GAATGC 1 cut(s) 460
MvaI CCWGG 4 cut(s) 244, 418, 491, 697
MvnI CGCG 4 cut(s) 38, 55, 542, 766
MwoI GCNNNNNNNGC 2 cut(s) 284, 652
NaeI GCCGGC 1 cut(s) 460
NciI CCSGG 2 cut(s) 175, 691
NcoI CCATGG 1 cut(s) 138
NdeII GATC 4 cut(s) 46, 270, 340, 666
NgoMIV GCCGGC 1 cut(s) 458
NlaIII CATG 5 cut(s) 136, 142, 199, 820, 863
NlaIV GGNNCC 3 cut(s) 184, 427, 770
NmeAIII GCCGAG 1 cut(s) 262
NmuCI GTSAC 2 cut(s) 113, 209
NspI RCATGY 2 cut(s) 199, 863
NspV TTCGAA 1 cut(s) 14
PciI ACATGT 1 cut(s) 859
PctI GAATGC 1 cut(s) 460
PdiI GCCGGC 1 cut(s) 460
PfeI GAWTC 1 cut(s) 731
PflFI GACNNNGTC 1 cut(s) 257
PkrI GCNGC 8 cut(s) 54, 498, 520, 648, 688, 747, 768, 813
PleI GAGTC 2 cut(s) 70, 688
PpsI GAGTC 2 cut(s) 70, 688
PscI ACATGT 1 cut(s) 859
PshAI GACNNNNGTC 2 cut(s) 111, 207
Psp124BI GAGCTC 1 cut(s) 729
Psp6I CCWGG 4 cut(s) 242, 416, 489, 695
PspEI GGTNACC 1 cut(s) 209
PspFI CCCAGC 2 cut(s) 422, 599
PspGI CCWGG 4 cut(s) 242, 416, 489, 695
PspN4I GGNNCC 3 cut(s) 184, 427, 770
PspPI GGNCC 3 cut(s) 246, 426, 693
PsrI GAACNNNNNNTAC 2 cut(s) 470, 502
PsuI RGATCY 1 cut(s) 46
PsyI GACNNNGTC 1 cut(s) 257
PvuII CAGCTG 2 cut(s) 532, 748
RsaI GTAC 3 cut(s) 479, 539, 876
RsaNI GTAC 3 cut(s) 478, 538, 875
RseI CAYNNNNRTG 1 cut(s) 137
SacI GAGCTC 1 cut(s) 729
SacII CCGCGG 1 cut(s) 56
SalI GTCGAC 1 cut(s) 251
SaqAI TTAA 1 cut(s) 807
SatI GCNGC 8 cut(s) 53, 497, 519, 647, 687, 746, 767, 812
Sau3AI GATC 4 cut(s) 46, 270, 340, 666
Sau96I GGNCC 3 cut(s) 246, 426, 693
SchI GAGTC 2 cut(s) 71, 689
ScrFI CCNGG 6 cut(s) 175, 244, 418, 491, 691, 697
SduI GDGCHC 2 cut(s) 729, 888
SfcI CTRYAG 1 cut(s) 163
Sfr303I CCGCGG 1 cut(s) 56
SfuI TTCGAA 1 cut(s) 14
SgrBI CCGCGG 1 cut(s) 56
SgrDI CGTCGACG 1 cut(s) 251
SinI GGWCC 2 cut(s) 246, 693
SmiMI CAYNNNNRTG 1 cut(s) 137
Sse9I AATT 1 cut(s) 40
SstI GAGCTC 1 cut(s) 729
StyD4I CCNGG 6 cut(s) 173, 242, 416, 489, 689, 695
StyI CCWWGG 2 cut(s) 138, 399
TaaI ACNGT 3 cut(s) 113, 209, 721
TaiI ACGT 2 cut(s) 11, 447
TaqI TCGA 4 cut(s) 14, 252, 633, 729
TasI AATT 1 cut(s) 40
TatI WGTACW 1 cut(s) 874
TauI GCSGC 2 cut(s) 55, 769
TfiI GAWTC 1 cut(s) 731
Tru1I TTAA 1 cut(s) 807
Tru9I TTAA 1 cut(s) 807
TscAI CASTG 1 cut(s) 893
TseFI GTSAC 2 cut(s) 113, 209
TseI GCWGC 6 cut(s) 496, 518, 646, 686, 745, 811
Tsp45I GTSAC 2 cut(s) 113, 209
TspDTI ATGAA 1 cut(s) 215
TspGWI ACGGA 2 cut(s) 238, 718
TspRI CASTG 1 cut(s) 893
Tth111I GACNNNGTC 1 cut(s) 257
VneI GTGCAC 1 cut(s) 884
VpaK11BI GGWCC 2 cut(s) 246, 693
XapI RAATTY 1 cut(s) 40
XceI RCATGY 2 cut(s) 199, 863
XmiI GTMKAC 1 cut(s) 252
ZraI GACGTC 2 cut(s) 9, 445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.