Rh7BG359700
BZIP Family

G-box-binding factor 4-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001805
Physical Location & Seq
Forward (+)
37918837 .. 37922667
3831 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG359700.1

Sequence Viewer

Length: 717 bp
ATGGCGTCGTCGAAGTTAGTCTCAGTCTCGACGGCCAATTCGGATCTGCCACGCGACTCCTCTATATGTTCTCTCTCCACTCTCATCGCCGACGTCGACAAGCACAACCACTCCATCACCATGGACGACCTCCTCAAGAACATCTACAACGACCAACCCTCGGCCTCTCCGCCGCCGCCGTCCATGGACGGAGGAGCCTCCGCCTCGGCCGCCGCGCCGGGGAGGACGGTGGAGGAGGTCTGGAAGGAGATCGTCGCCGGCGGAGGAGGAGGAGGAGGAGGAGGAGCTGACGGAGAGGACGAGGCCGCGGAGGGGGAGGCGGATCAGGTGCGGGCGGAGATGACGTTGGAGGATTTTCTGACCAGGGCTGGGGCCGTGAGGGAGGAGGACGTCGGCGTGGGACCCGGGGCGGTGGTTCCGATCGGGTACGGGCAGTTCCAGGTCCAGCAGCCGCCGCCGTCTCAGCCTCAAGGTCAATTGGTGTACGCAAACAACAACAATGGAACAACGAGTGGTGGTGGGAGAGGAACGAAGAGGAGAGCTGTGCAGGAGGCGCCGCTTGATAAGGCGACGCAGCAGAAGCAGAGGAGGATGATCAAGAACAGAGAATCCGCTGCCAGGTCAAGGGAACGCAAGCAGGCTTACACAGTTGAGCTAGAATCTCTGGTGACGCAACTGGAGGAGGAACATGCACGCCTCATGAGAGAAGAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
bZIP_1

Protein Analysis

238

Amino Acids

25.18

Weight (kDa)

4.9

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 191 - 235 1.8e-11 bZIP transcription factor
bZIP_2 PF07716 192 - 237 9e-10 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 96, 393
AccB1I GGYRCC 1 cut(s) 553
AccI GTMKAC 1 cut(s) 96
AccII CGCG 3 cut(s) 54, 215, 308
AclWI GGATC 2 cut(s) 51, 330
AcoI YGGCCR 2 cut(s) 33, 207
AcyI GRCGYC 4 cut(s) 5, 93, 390, 554
AfaI GTAC 2 cut(s) 428, 485
AfiI CCNNNNNNNGG 6 cut(s) 160, 219, 312, 369, 618, 624
AjnI CCWGG 3 cut(s) 362, 438, 617
AloI GAACNNNNNNTCC 2 cut(s) 593, 625
AluBI AGCT 3 cut(s) 287, 542, 655
AluI AGCT 3 cut(s) 287, 542, 655
Alw26I GTCTC 3 cut(s) 25, 31, 465
AlwI GGATC 2 cut(s) 51, 330
Ama87I CYCGRG 1 cut(s) 404
AoxI GGCC 5 cut(s) 33, 162, 207, 303, 372
ApeKI GCWGC 3 cut(s) 448, 574, 614
ArsI GACNNNNNNTTYG 2 cut(s) 22, 54
AspLEI GCGC 2 cut(s) 217, 556
AspS9I GGNCC 3 cut(s) 372, 401, 442
AsuC2I CCSGG 3 cut(s) 219, 405, 406
AsuHPI GGTGA 2 cut(s) 109, 679
AvaI CYCGRG 1 cut(s) 404
AvaII GGWCC 2 cut(s) 401, 442
BanI GGYRCC 1 cut(s) 553
BbvI GCAGC 3 cut(s) 460, 586, 601
BccI CCATC 1 cut(s) 122
BceAI ACGGC 4 cut(s) 48, 163, 359, 442
BciT130I CCWGG 3 cut(s) 364, 440, 619
BclI TGATCA 1 cut(s) 594
BcnI CCSGG 3 cut(s) 219, 405, 406
BcoDI GTCTC 3 cut(s) 25, 31, 465
BfaI CTAG 1 cut(s) 656
BfoI RGCGCY 1 cut(s) 557
Bme1390I CCNGG 6 cut(s) 219, 364, 405, 406, 440, 619
Bme18I GGWCC 2 cut(s) 401, 442
BmeT110I CYCGRG 1 cut(s) 404
BmgT120I GGNCC 3 cut(s) 372, 401, 442
BmiI GGNNCC 6 cut(s) 196, 373, 402, 403, 417, 555
BmrFI CCNGG 6 cut(s) 219, 364, 405, 406, 440, 619
BpmI CTGGAG 1 cut(s) 698
BpuEI CTTGAG 2 cut(s) 119, 453
BpuMI CCSGG 3 cut(s) 219, 405, 406
BsaHI GRCGYC 4 cut(s) 5, 93, 390, 554
BsaJI CCNNGG 9 cut(s) 120, 159, 183, 204, 218, 306, 363, 404, 405
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 329, 359
Bsc4I CCNNNNNNNGG 6 cut(s) 160, 219, 312, 369, 618, 624
Bse118I RCCGGY 1 cut(s) 257
Bse1I ACTGG 1 cut(s) 681
BseBI CCWGG 3 cut(s) 364, 440, 619
BseDI CCNNGG 9 cut(s) 120, 159, 183, 204, 218, 306, 363, 404, 405
BseGI GGATG 1 cut(s) 597
BseLI CCNNNNNNNGG 6 cut(s) 160, 219, 312, 369, 618, 624
BseMII CTCAG 2 cut(s) 36, 476
BseNI ACTGG 1 cut(s) 681
BseX3I CGGCCG 1 cut(s) 207
BseXI GCAGC 3 cut(s) 460, 586, 601
BseYI CCCAGC 1 cut(s) 368
BsgI GTGCAG 1 cut(s) 566
Bsh1236I CGCG 3 cut(s) 54, 215, 308
Bsh1285I CGRYCG 2 cut(s) 210, 423
BshFI GGCC 5 cut(s) 35, 164, 209, 305, 374
BshNI GGYRCC 1 cut(s) 553
BsiEI CGRYCG 2 cut(s) 210, 423
BsiHKCI CYCGRG 1 cut(s) 404
BsiSI CCGG 3 cut(s) 218, 258, 405
BslFI GGGAC 1 cut(s) 414
BslI CCNNNNNNNGG 6 cut(s) 160, 219, 312, 369, 618, 624
BsmAI GTCTC 3 cut(s) 25, 31, 465
BsmBI CGTCTC 1 cut(s) 465
BsmFI GGGAC 1 cut(s) 414
BsnI GGCC 5 cut(s) 35, 164, 209, 305, 374
BsoBI CYCGRG 1 cut(s) 404
Bsp143I GATC 5 cut(s) 43, 249, 322, 420, 594
Bsp19I CCATGG 2 cut(s) 120, 183
BspANI GGCC 5 cut(s) 35, 164, 209, 305, 374
BspCNI CTCAG 2 cut(s) 35, 475
BspFNI CGCG 3 cut(s) 54, 215, 308
BspHI TCATGA 1 cut(s) 699
BspLI GGNNCC 6 cut(s) 196, 373, 402, 403, 417, 555
BspPI GGATC 2 cut(s) 51, 330
BspT107I GGYRCC 1 cut(s) 553
BsrFI RCCGGY 1 cut(s) 257
BsrI ACTGG 1 cut(s) 681
BssAI RCCGGY 1 cut(s) 257
BssECI CCNNGG 9 cut(s) 120, 159, 183, 204, 218, 306, 363, 404, 405
BssMI GATC 5 cut(s) 43, 249, 322, 420, 594
BssNI GRCGYC 4 cut(s) 5, 93, 390, 554
BssT1I CCWWGG 2 cut(s) 120, 183
Bst2UI CCWGG 3 cut(s) 364, 440, 619
Bst4CI ACNGT 2 cut(s) 229, 649
Bst6I CTCTTC 2 cut(s) 527, 702
BstACI GRCGYC 4 cut(s) 5, 93, 390, 554
BstC8I GCNNGC 5 cut(s) 259, 333, 635, 639, 694
BstDEI CTNAG 2 cut(s) 22, 462
BstDSI CCRYGG 3 cut(s) 120, 183, 306
BstF5I GGATG 1 cut(s) 597
BstFNI CGCG 3 cut(s) 54, 215, 308
BstH2I RGCGCY 1 cut(s) 557
BstHHI GCGC 2 cut(s) 217, 556
BstKTI GATC 5 cut(s) 46, 252, 325, 423, 597
BstMAI GTCTC 3 cut(s) 25, 31, 465
BstMBI GATC 5 cut(s) 43, 249, 322, 420, 594
BstMCI CGRYCG 2 cut(s) 210, 423
BstMWI GCNNNNNNNGC 5 cut(s) 209, 454, 463, 553, 580
BstNI CCWGG 3 cut(s) 364, 440, 619
BstNSI RCATGY 1 cut(s) 692
BstSCI CCNGG 6 cut(s) 217, 362, 403, 404, 438, 617
BstUI CGCG 3 cut(s) 54, 215, 308
BstV1I GCAGC 3 cut(s) 460, 586, 601
BstX2I RGATCY 1 cut(s) 43
BstXI CCANNNNNNTGG 1 cut(s) 121
BstYI RGATCY 1 cut(s) 43
BstZI CGGCCG 1 cut(s) 207
BsuRI GGCC 5 cut(s) 35, 164, 209, 305, 374
BtgI CCRYGG 3 cut(s) 120, 183, 306
BtgZI GCGATG 1 cut(s) 70
BtsCI GGATG 1 cut(s) 597
Cac8I GCNNGC 5 cut(s) 259, 333, 635, 639, 694
CciI TCATGA 1 cut(s) 699
CfoI GCGC 2 cut(s) 217, 556
Cfr10I RCCGGY 1 cut(s) 257
Cfr13I GGNCC 3 cut(s) 372, 401, 442
Cfr42I CCGCGG 1 cut(s) 309
Cfr9I CCCGGG 1 cut(s) 404
CseI GACGC 2 cut(s) 580, 679
Csp6I GTAC 2 cut(s) 427, 484
CviAII CATG 4 cut(s) 121, 184, 689, 700
CviQI GTAC 2 cut(s) 427, 484
DdeI CTNAG 2 cut(s) 22, 462
DinI GGCGCC 1 cut(s) 555
DpnI GATC 5 cut(s) 45, 251, 324, 422, 596
DpnII GATC 5 cut(s) 43, 249, 322, 420, 594
EaeI YGGCCR 2 cut(s) 33, 207
EagI CGGCCG 1 cut(s) 207
Eam1104I CTCTTC 2 cut(s) 527, 702
EarI CTCTTC 2 cut(s) 527, 702
EciI GGCGGA 5 cut(s) 159, 190, 276, 335, 350
EclXI CGGCCG 1 cut(s) 207
Eco130I CCWWGG 2 cut(s) 120, 183
Eco47I GGWCC 2 cut(s) 401, 442
Eco52I CGGCCG 1 cut(s) 207
Eco88I CYCGRG 1 cut(s) 404
EcoO109I RGGNCCY 1 cut(s) 401
EcoRII CCWGG 3 cut(s) 362, 438, 617
EcoT14I CCWWGG 2 cut(s) 120, 183
EgeI GGCGCC 1 cut(s) 555
EheI GGCGCC 1 cut(s) 555
ErhI CCWWGG 2 cut(s) 120, 183
Esp3I CGTCTC 1 cut(s) 465
FaeI CATG 4 cut(s) 124, 187, 692, 703
FaiI YATR 7 cut(s) 65, 67, 122, 185, 690, 701, 715
FaqI GGGAC 1 cut(s) 414
FatI CATG 4 cut(s) 120, 183, 688, 699
FauI CCCGC 1 cut(s) 324
FbaI TGATCA 1 cut(s) 594
FblI GTMKAC 1 cut(s) 96
FokI GGATG 1 cut(s) 604
FspBI CTAG 1 cut(s) 656
GlaI GCGC 2 cut(s) 216, 555
GsaI CCCAGC 1 cut(s) 372
GsuI CTGGAG 1 cut(s) 698
HaeII RGCGCY 1 cut(s) 557
HaeIII GGCC 5 cut(s) 35, 164, 209, 305, 374
HapII CCGG 3 cut(s) 218, 258, 405
HgaI GACGC 2 cut(s) 580, 679
HhaI GCGC 2 cut(s) 217, 556
Hin1I GRCGYC 4 cut(s) 5, 93, 390, 554
Hin1II CATG 4 cut(s) 124, 187, 692, 703
Hin6I GCGC 2 cut(s) 215, 554
HinP1I GCGC 2 cut(s) 215, 554
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HinfI GANTC 3 cut(s) 56, 608, 659
HpaII CCGG 3 cut(s) 218, 258, 405
HphI GGTGA 2 cut(s) 109, 679
Hpy166II GTNNAC 2 cut(s) 97, 484
Hpy188I TCNGA 3 cut(s) 43, 360, 420
Hpy188III TCNNGA 5 cut(s) 28, 136, 241, 598, 700
Hpy8I GTNNAC 2 cut(s) 97, 484
Hpy99I CGWCG 8 cut(s) 10, 13, 34, 95, 98, 257, 395, 574
HpyAV CCTTC 1 cut(s) 238
HpyCH4III ACNGT 2 cut(s) 229, 649
HpyCH4IV ACGT 3 cut(s) 93, 344, 390
HpyCH4V TGCA 2 cut(s) 547, 692
HpyF10VI GCNNNNNNNGC 5 cut(s) 209, 454, 463, 553, 580
HpyF3I CTNAG 2 cut(s) 22, 462
HpySE526I ACGT 3 cut(s) 93, 344, 390
Hsp92I GRCGYC 4 cut(s) 5, 93, 390, 554
Hsp92II CATG 4 cut(s) 124, 187, 692, 703
HspAI GCGC 2 cut(s) 215, 554
KasI GGCGCC 1 cut(s) 553
KflI GGGWCCC 1 cut(s) 401
KroI GCCGGC 1 cut(s) 257
KroNI GCCGGC 1 cut(s) 259
Ksp22I TGATCA 1 cut(s) 594
KspI CCGCGG 1 cut(s) 309
Kzo9I GATC 5 cut(s) 43, 249, 322, 420, 594
LmnI GCTCC 2 cut(s) 194, 284
Lsp1109I GCAGC 3 cut(s) 460, 586, 601
MaeI CTAG 1 cut(s) 656
MaeII ACGT 3 cut(s) 93, 344, 390
MaeIII GTNAC 1 cut(s) 667
MalI GATC 5 cut(s) 45, 251, 324, 422, 596
MboI GATC 5 cut(s) 43, 249, 322, 420, 594
MboII GAAGA 1 cut(s) 544
MfeI CAATTG 1 cut(s) 476
MflI RGATCY 1 cut(s) 43
MluCI AATT 2 cut(s) 37, 476
Mly113I GGCGCC 1 cut(s) 554
MlyI GAGTC 1 cut(s) 50
MmeI TCCRAC 1 cut(s) 327
MreI CGCCGGCG 1 cut(s) 257
MroNI GCCGGC 1 cut(s) 257
MslI CAYNNNNRTG 1 cut(s) 119
MspA1I CMGCKG 2 cut(s) 308, 614
MspI CCGG 3 cut(s) 218, 258, 405
MspR9I CCNGG 6 cut(s) 219, 364, 405, 406, 440, 619
MunI CAATTG 1 cut(s) 476
MvaI CCWGG 3 cut(s) 364, 440, 619
MvnI CGCG 3 cut(s) 54, 215, 308
MwoI GCNNNNNNNGC 5 cut(s) 209, 454, 463, 553, 580
NaeI GCCGGC 1 cut(s) 259
NarI GGCGCC 1 cut(s) 554
NciI CCSGG 3 cut(s) 219, 405, 406
NcoI CCATGG 2 cut(s) 120, 183
NdeII GATC 5 cut(s) 43, 249, 322, 420, 594
NgoMIV GCCGGC 1 cut(s) 257
NlaIII CATG 4 cut(s) 124, 187, 692, 703
NlaIV GGNNCC 6 cut(s) 196, 373, 402, 403, 417, 555
NmeAIII GCCGAG 2 cut(s) 140, 185
NmuCI GTSAC 1 cut(s) 667
NspI RCATGY 1 cut(s) 692
PagI TCATGA 1 cut(s) 699
PcsI WCGNNNNNNNCGW 2 cut(s) 93, 297
PdiI GCCGGC 1 cut(s) 259
PfeI GAWTC 2 cut(s) 608, 659
Ple19I CGATCG 1 cut(s) 423
PleI GAGTC 1 cut(s) 50
PluTI GGCGCC 1 cut(s) 557
PpsI GAGTC 1 cut(s) 50
PpuMI RGGWCCY 1 cut(s) 401
Psp5II RGGWCCY 1 cut(s) 401
Psp6I CCWGG 3 cut(s) 362, 438, 617
PspFI CCCAGC 1 cut(s) 368
PspGI CCWGG 3 cut(s) 362, 438, 617
PspN4I GGNNCC 6 cut(s) 196, 373, 402, 403, 417, 555
PspPI GGNCC 3 cut(s) 372, 401, 442
PspPPI RGGWCCY 1 cut(s) 401
PsrI GAACNNNNNNTAC 2 cut(s) 419, 451
PsuI RGATCY 1 cut(s) 43
PvuI CGATCG 1 cut(s) 423
RsaI GTAC 2 cut(s) 428, 485
RsaNI GTAC 2 cut(s) 427, 484
RseI CAYNNNNRTG 1 cut(s) 119
SacII CCGCGG 1 cut(s) 309
SalI GTCGAC 1 cut(s) 95
Sau3AI GATC 5 cut(s) 43, 249, 322, 420, 594
Sau96I GGNCC 3 cut(s) 372, 401, 442
SchI GAGTC 1 cut(s) 50
ScrFI CCNGG 6 cut(s) 219, 364, 405, 406, 440, 619
SfoI GGCGCC 1 cut(s) 555
Sfr303I CCGCGG 1 cut(s) 309
SgrAI CRCCGGYG 1 cut(s) 257
SgrBI CCGCGG 1 cut(s) 309
SinI GGWCC 2 cut(s) 401, 442
SmaI CCCGGG 1 cut(s) 406
SmiMI CAYNNNNRTG 1 cut(s) 119
SmlI CTYRAG 2 cut(s) 134, 468
SmoI CTYRAG 2 cut(s) 134, 468
Sse9I AATT 2 cut(s) 37, 476
SspDI GGCGCC 1 cut(s) 553
SspMI CTAG 1 cut(s) 656
StyD4I CCNGG 6 cut(s) 217, 362, 403, 404, 438, 617
StyI CCWWGG 2 cut(s) 120, 183
TaaI ACNGT 2 cut(s) 229, 649
TaiI ACGT 3 cut(s) 96, 347, 393
TaqI TCGA 3 cut(s) 11, 29, 96
TasI AATT 2 cut(s) 37, 476
TauI GCSGC 8 cut(s) 175, 178, 212, 215, 308, 454, 457, 559
TfiI GAWTC 2 cut(s) 608, 659
TseFI GTSAC 1 cut(s) 667
TseI GCWGC 3 cut(s) 448, 574, 614
Tsp45I GTSAC 1 cut(s) 667
TspGWI ACGGA 2 cut(s) 204, 306
TspMI CCCGGG 1 cut(s) 404
VpaK11BI GGWCC 2 cut(s) 401, 442
XceI RCATGY 1 cut(s) 692
XmaI CCCGGG 1 cut(s) 404
XmiI GTMKAC 1 cut(s) 96
XspI CTAG 1 cut(s) 656
ZraI GACGTC 2 cut(s) 94, 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.