Rmu_sc0003894.1_g000002
BZIP Family

G-box-binding factor 4-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003894.1
Physical Location & Seq
Forward (+)
21059 .. 23921
2863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003894.1_g000002.1.cds

Sequence Viewer

Length: 813 bp
atggcgtcgtcgaagttagtctcagtctcgacggccaattcggatctgccacgcgactcctctatatgttctctctccactctcatcgccgacgtcgacaagcacaaccactccatcaccatggacgacctcctcaagaacatctacaacgaccaaccctcggcttctccgccgccgcctccgtccatggacggaggagcctcagcctcggccgccgcgccggggaggacggtggaggaggtctggaaggagatcgtcgccggcggaggaggagctgacggagaggacgaggccgcggagggggaggcggatcaggtgcgggcggagatgacgttggaggattttctgaccagggctggggccgtgagggaggaggacgtcggcgtgggacccggggcggtggttccgatcgggtacgggcagttccaggtgcagcagccgccgccgcctcagcctcaaggtcaattggtgtacgcaaacaacaacaatggaacaacgagtggaggtggtgggagaggaacgaagaggagagctgtgcaggaggcgccgcttgataaggcgacgcagcagaagcagaggaggatgatcaagaacagagaatccgctgccaggtcaagggaacgcaagcaggcttacacagtggagctagaatctctggtgacgcagctggaggaggaaaatgcacgcctcatgagagaagaggctgagcagaagaaggagaggtataagaagctcatggagaacctcattcctgtcgtggagaagaggagacctgcacgtgttcttcggagagtgcaatctgtgcactggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

270

Amino Acids

29.39

Weight (kDa)

5.81

Isoelectric Point (pI)

54.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 96, 381
Acc36I ACCTGC 1 cut(s) 781
AccB1I GGYRCC 1 cut(s) 544
AccI GTMKAC 1 cut(s) 96
AccII CGCG 3 cut(s) 54, 218, 296
AclWI GGATC 2 cut(s) 51, 318
AcoI YGGCCR 2 cut(s) 33, 210
AcvI CACGTG 1 cut(s) 779
AcyI GRCGYC 4 cut(s) 5, 93, 378, 545
AfaI GTAC 2 cut(s) 416, 473
AfiI CCNNNNNNNGG 6 cut(s) 160, 222, 300, 357, 609, 615
AflIII ACRYGT 1 cut(s) 778
AjnI CCWGG 3 cut(s) 350, 426, 608
AloI GAACNNNNNNTCC 2 cut(s) 584, 616
AluBI AGCT 5 cut(s) 275, 533, 646, 667, 733
AluI AGCT 5 cut(s) 275, 533, 646, 667, 733
Alw21I GWGCWC 1 cut(s) 807
Alw26I GTCTC 3 cut(s) 25, 31, 763
Alw44I GTGCAC 1 cut(s) 803
AlwI GGATC 2 cut(s) 51, 318
Ama87I CYCGRG 1 cut(s) 392
AoxI GGCC 4 cut(s) 33, 210, 291, 360
ApaLI GTGCAC 1 cut(s) 803
ApeKI GCWGC 5 cut(s) 433, 436, 565, 605, 664
ArsI GACNNNNNNTTYG 2 cut(s) 22, 54
AspLEI GCGC 2 cut(s) 220, 547
AspS9I GGNCC 2 cut(s) 360, 389
AsuC2I CCSGG 3 cut(s) 222, 393, 394
AsuHPI GGTGA 2 cut(s) 109, 670
AvaI CYCGRG 1 cut(s) 392
AvaII GGWCC 1 cut(s) 389
BaeGI GKGCMC 1 cut(s) 807
BanI GGYRCC 1 cut(s) 544
BbrPI CACGTG 1 cut(s) 779
Bbv12I GWGCWC 1 cut(s) 807
BbvCI CCTCAGC 2 cut(s) 202, 450
BbvI GCAGC 5 cut(s) 445, 448, 577, 592, 676
BccI CCATC 1 cut(s) 122
BceAI ACGGC 2 cut(s) 48, 347
BciT130I CCWGG 3 cut(s) 352, 428, 610
BclI TGATCA 1 cut(s) 585
BcnI CCSGG 3 cut(s) 222, 393, 394
BcoDI GTCTC 3 cut(s) 25, 31, 763
BfaI CTAG 1 cut(s) 647
BfoI RGCGCY 1 cut(s) 548
BfuAI ACCTGC 1 cut(s) 781
BlpI GCTNAGC 1 cut(s) 705
Bme1390I CCNGG 6 cut(s) 222, 352, 393, 394, 428, 610
Bme18I GGWCC 1 cut(s) 389
BmeT110I CYCGRG 1 cut(s) 392
BmgT120I GGNCC 2 cut(s) 360, 389
BmiI GGNNCC 6 cut(s) 199, 361, 390, 391, 405, 546
BmrFI CCNGG 6 cut(s) 222, 352, 393, 394, 428, 610
BpmI CTGGAG 1 cut(s) 689
Bpu10I CCTNAGC 2 cut(s) 202, 450
Bpu1102I GCTNAGC 1 cut(s) 705
BpuEI CTTGAG 2 cut(s) 119, 441
BpuMI CCSGG 3 cut(s) 222, 393, 394
BsaAI YACGTR 1 cut(s) 779
BsaHI GRCGYC 4 cut(s) 5, 93, 378, 545
BsaI GGTCTC 1 cut(s) 763
BsaJI CCNNGG 9 cut(s) 120, 159, 186, 207, 221, 294, 351, 392, 393
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 317, 347
Bsc4I CCNNNNNNNGG 6 cut(s) 160, 222, 300, 357, 609, 615
Bse118I RCCGGY 1 cut(s) 260
Bse1I ACTGG 1 cut(s) 812
BseBI CCWGG 3 cut(s) 352, 428, 610
BseDI CCNNGG 9 cut(s) 120, 159, 186, 207, 221, 294, 351, 392, 393
BseGI GGATG 1 cut(s) 588
BseLI CCNNNNNNNGG 6 cut(s) 160, 222, 300, 357, 609, 615
BseMII CTCAG 4 cut(s) 36, 216, 464, 696
BseNI ACTGG 1 cut(s) 812
BseSI GKGCMC 1 cut(s) 807
BseX3I CGGCCG 1 cut(s) 210
BseXI GCAGC 5 cut(s) 445, 448, 577, 592, 676
BseYI CCCAGC 1 cut(s) 356
BsgI GTGCAG 3 cut(s) 452, 557, 759
Bsh1236I CGCG 3 cut(s) 54, 218, 296
Bsh1285I CGRYCG 2 cut(s) 213, 411
BshFI GGCC 4 cut(s) 35, 212, 293, 362
BshNI GGYRCC 1 cut(s) 544
BsiEI CGRYCG 2 cut(s) 213, 411
BsiHKAI GWGCWC 1 cut(s) 807
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 3 cut(s) 221, 261, 393
BslFI GGGAC 1 cut(s) 402
BslI CCNNNNNNNGG 6 cut(s) 160, 222, 300, 357, 609, 615
BsmAI GTCTC 3 cut(s) 25, 31, 763
BsmFI GGGAC 1 cut(s) 402
BsnI GGCC 4 cut(s) 35, 212, 293, 362
Bso31I GGTCTC 1 cut(s) 763
BsoBI CYCGRG 1 cut(s) 392
Bsp1286I GDGCHC 1 cut(s) 807
Bsp143I GATC 5 cut(s) 43, 252, 310, 408, 585
Bsp1720I GCTNAGC 1 cut(s) 705
Bsp19I CCATGG 2 cut(s) 120, 186
BspANI GGCC 4 cut(s) 35, 212, 293, 362
BspCNI CTCAG 4 cut(s) 35, 215, 463, 697
BspFNI CGCG 3 cut(s) 54, 218, 296
BspHI TCATGA 1 cut(s) 690
BspLI GGNNCC 6 cut(s) 199, 361, 390, 391, 405, 546
BspMI ACCTGC 1 cut(s) 781
BspPI GGATC 2 cut(s) 51, 318
BspT107I GGYRCC 1 cut(s) 544
BspTNI GGTCTC 1 cut(s) 763
BsrFI RCCGGY 1 cut(s) 260
BsrI ACTGG 1 cut(s) 812
BssAI RCCGGY 1 cut(s) 260
BssECI CCNNGG 9 cut(s) 120, 159, 186, 207, 221, 294, 351, 392, 393
BssMI GATC 5 cut(s) 43, 252, 310, 408, 585
BssNI GRCGYC 4 cut(s) 5, 93, 378, 545
BssT1I CCWWGG 2 cut(s) 120, 186
Bst2UI CCWGG 3 cut(s) 352, 428, 610
Bst4CI ACNGT 2 cut(s) 232, 640
Bst6I CTCTTC 3 cut(s) 518, 693, 758
BstACI GRCGYC 4 cut(s) 5, 93, 378, 545
BstAPI GCANNNNNTGC 1 cut(s) 802
BstBAI YACGTR 1 cut(s) 779
BstC8I GCNNGC 5 cut(s) 262, 321, 626, 630, 685
BstDEI CTNAG 4 cut(s) 22, 202, 450, 705
BstDSI CCRYGG 3 cut(s) 120, 186, 294
BstF5I GGATG 1 cut(s) 588
BstFNI CGCG 3 cut(s) 54, 218, 296
BstH2I RGCGCY 1 cut(s) 548
BstHHI GCGC 2 cut(s) 220, 547
BstKTI GATC 5 cut(s) 46, 255, 313, 411, 588
BstMAI GTCTC 3 cut(s) 25, 31, 763
BstMBI GATC 5 cut(s) 43, 252, 310, 408, 585
BstMCI CGRYCG 2 cut(s) 213, 411
BstMWI GCNNNNNNNGC 8 cut(s) 212, 439, 442, 445, 451, 544, 571, 802
BstNI CCWGG 3 cut(s) 352, 428, 610
BstSCI CCNGG 6 cut(s) 220, 350, 391, 392, 426, 608
BstSLI GKGCMC 1 cut(s) 807
BstUI CGCG 3 cut(s) 54, 218, 296
BstV1I GCAGC 5 cut(s) 445, 448, 577, 592, 676
BstX2I RGATCY 1 cut(s) 43
BstXI CCANNNNNNTGG 1 cut(s) 121
BstYI RGATCY 1 cut(s) 43
BstZI CGGCCG 1 cut(s) 210
BsuRI GGCC 4 cut(s) 35, 212, 293, 362
BtgI CCRYGG 3 cut(s) 120, 186, 294
BtgZI GCGATG 1 cut(s) 70
BtsCI GGATG 1 cut(s) 588
BtsIMutI CAGTG 2 cut(s) 645, 805
BveI ACCTGC 1 cut(s) 781
Cac8I GCNNGC 5 cut(s) 262, 321, 626, 630, 685
CciI TCATGA 1 cut(s) 690
CfoI GCGC 2 cut(s) 220, 547
Cfr10I RCCGGY 1 cut(s) 260
Cfr13I GGNCC 2 cut(s) 360, 389
Cfr42I CCGCGG 1 cut(s) 297
Cfr9I CCCGGG 1 cut(s) 392
CseI GACGC 2 cut(s) 571, 670
Csp6I GTAC 2 cut(s) 415, 472
CviAII CATG 4 cut(s) 121, 187, 691, 736
CviQI GTAC 2 cut(s) 415, 472
DdeI CTNAG 4 cut(s) 22, 202, 450, 705
DinI GGCGCC 1 cut(s) 546
DpnI GATC 5 cut(s) 45, 254, 312, 410, 587
DpnII GATC 5 cut(s) 43, 252, 310, 408, 585
EaeI YGGCCR 2 cut(s) 33, 210
EagI CGGCCG 1 cut(s) 210
Eam1104I CTCTTC 3 cut(s) 518, 693, 758
EarI CTCTTC 3 cut(s) 518, 693, 758
EciI GGCGGA 4 cut(s) 159, 279, 323, 338
EclXI CGGCCG 1 cut(s) 210
Eco130I CCWWGG 2 cut(s) 120, 186
Eco31I GGTCTC 1 cut(s) 763
Eco47I GGWCC 1 cut(s) 389
Eco52I CGGCCG 1 cut(s) 210
Eco72I CACGTG 1 cut(s) 779
Eco88I CYCGRG 1 cut(s) 392
EcoO109I RGGNCCY 1 cut(s) 389
EcoRII CCWGG 3 cut(s) 350, 426, 608
EcoT14I CCWWGG 2 cut(s) 120, 186
EgeI GGCGCC 1 cut(s) 546
EheI GGCGCC 1 cut(s) 546
ErhI CCWWGG 2 cut(s) 120, 186
FaeI CATG 4 cut(s) 124, 190, 694, 739
FaiI YATR 7 cut(s) 65, 67, 122, 188, 692, 726, 737
FaqI GGGAC 1 cut(s) 402
FatI CATG 4 cut(s) 120, 186, 690, 735
FauI CCCGC 1 cut(s) 312
FbaI TGATCA 1 cut(s) 585
FblI GTMKAC 1 cut(s) 96
FokI GGATG 1 cut(s) 595
FspBI CTAG 1 cut(s) 647
GlaI GCGC 2 cut(s) 219, 546
GsaI CCCAGC 1 cut(s) 360
GsuI CTGGAG 1 cut(s) 689
HaeII RGCGCY 1 cut(s) 548
HaeIII GGCC 4 cut(s) 35, 212, 293, 362
HapII CCGG 3 cut(s) 221, 261, 393
HgaI GACGC 2 cut(s) 571, 670
HhaI GCGC 2 cut(s) 220, 547
Hin1I GRCGYC 4 cut(s) 5, 93, 378, 545
Hin1II CATG 4 cut(s) 124, 190, 694, 739
Hin6I GCGC 2 cut(s) 218, 545
HinP1I GCGC 2 cut(s) 218, 545
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HinfI GANTC 3 cut(s) 56, 599, 650
HpaII CCGG 3 cut(s) 221, 261, 393
HphI GGTGA 2 cut(s) 109, 670
Hpy166II GTNNAC 3 cut(s) 97, 472, 805
Hpy188I TCNGA 4 cut(s) 43, 348, 408, 789
Hpy188III TCNNGA 5 cut(s) 28, 136, 244, 589, 691
Hpy8I GTNNAC 3 cut(s) 97, 472, 805
Hpy99I CGWCG 8 cut(s) 10, 13, 34, 95, 98, 260, 383, 565
HpyAV CCTTC 2 cut(s) 241, 709
HpyCH4III ACNGT 2 cut(s) 232, 640
HpyCH4IV ACGT 4 cut(s) 93, 332, 378, 778
HpyCH4V TGCA 6 cut(s) 433, 538, 683, 776, 796, 805
HpyF10VI GCNNNNNNNGC 8 cut(s) 212, 439, 442, 445, 451, 544, 571, 802
HpyF3I CTNAG 4 cut(s) 22, 202, 450, 705
HpySE526I ACGT 4 cut(s) 93, 332, 378, 778
Hsp92I GRCGYC 4 cut(s) 5, 93, 378, 545
Hsp92II CATG 4 cut(s) 124, 190, 694, 739
HspAI GCGC 2 cut(s) 218, 545
KasI GGCGCC 1 cut(s) 544
KflI GGGWCCC 1 cut(s) 389
KroI GCCGGC 1 cut(s) 260
KroNI GCCGGC 1 cut(s) 262
Ksp22I TGATCA 1 cut(s) 585
KspI CCGCGG 1 cut(s) 297
Kzo9I GATC 5 cut(s) 43, 252, 310, 408, 585
LmnI GCTCC 3 cut(s) 197, 272, 643
Lsp1109I GCAGC 5 cut(s) 445, 448, 577, 592, 676
MaeI CTAG 1 cut(s) 647
MaeII ACGT 4 cut(s) 93, 332, 378, 778
MaeIII GTNAC 1 cut(s) 658
MalI GATC 5 cut(s) 45, 254, 312, 410, 587
MboI GATC 5 cut(s) 43, 252, 310, 408, 585
MboII GAAGA 5 cut(s) 535, 710, 724, 775, 776
MfeI CAATTG 1 cut(s) 464
MflI RGATCY 1 cut(s) 43
MhlI GDGCHC 1 cut(s) 807
MluCI AATT 2 cut(s) 37, 464
Mly113I GGCGCC 1 cut(s) 545
MlyI GAGTC 1 cut(s) 50
MmeI TCCRAC 1 cut(s) 315
MreI CGCCGGCG 1 cut(s) 260
MroNI GCCGGC 1 cut(s) 260
MslI CAYNNNNRTG 1 cut(s) 119
MspA1I CMGCKG 3 cut(s) 296, 605, 667
MspI CCGG 3 cut(s) 221, 261, 393
MspR9I CCNGG 6 cut(s) 222, 352, 393, 394, 428, 610
MunI CAATTG 1 cut(s) 464
MvaI CCWGG 3 cut(s) 352, 428, 610
MvnI CGCG 3 cut(s) 54, 218, 296
MwoI GCNNNNNNNGC 8 cut(s) 212, 439, 442, 445, 451, 544, 571, 802
NaeI GCCGGC 1 cut(s) 262
NarI GGCGCC 1 cut(s) 545
NciI CCSGG 3 cut(s) 222, 393, 394
NcoI CCATGG 2 cut(s) 120, 186
NdeII GATC 5 cut(s) 43, 252, 310, 408, 585
NgoMIV GCCGGC 1 cut(s) 260
NlaIII CATG 4 cut(s) 124, 190, 694, 739
NlaIV GGNNCC 6 cut(s) 199, 361, 390, 391, 405, 546
NmeAIII GCCGAG 2 cut(s) 140, 188
NmuCI GTSAC 1 cut(s) 658
PagI TCATGA 1 cut(s) 690
PcsI WCGNNNNNNNCGW 2 cut(s) 93, 285
PdiI GCCGGC 1 cut(s) 262
PfeI GAWTC 2 cut(s) 599, 650
Ple19I CGATCG 1 cut(s) 411
PleI GAGTC 1 cut(s) 50
PluTI GGCGCC 1 cut(s) 548
PmaCI CACGTG 1 cut(s) 779
PmlI CACGTG 1 cut(s) 779
PpsI GAGTC 1 cut(s) 50
Ppu21I YACGTR 1 cut(s) 779
PpuMI RGGWCCY 1 cut(s) 389
Psp5II RGGWCCY 1 cut(s) 389
Psp6I CCWGG 3 cut(s) 350, 426, 608
PspCI CACGTG 1 cut(s) 779
PspFI CCCAGC 1 cut(s) 356
PspGI CCWGG 3 cut(s) 350, 426, 608
PspN4I GGNNCC 6 cut(s) 199, 361, 390, 391, 405, 546
PspPI GGNCC 2 cut(s) 360, 389
PspPPI RGGWCCY 1 cut(s) 389
PsrI GAACNNNNNNTAC 2 cut(s) 407, 439
PsuI RGATCY 1 cut(s) 43
PvuI CGATCG 1 cut(s) 411
PvuII CAGCTG 1 cut(s) 667
RsaI GTAC 2 cut(s) 416, 473
RsaNI GTAC 2 cut(s) 415, 472
RseI CAYNNNNRTG 1 cut(s) 119
SacII CCGCGG 1 cut(s) 297
SalI GTCGAC 1 cut(s) 95
Sau3AI GATC 5 cut(s) 43, 252, 310, 408, 585
Sau96I GGNCC 2 cut(s) 360, 389
SchI GAGTC 1 cut(s) 50
ScrFI CCNGG 6 cut(s) 222, 352, 393, 394, 428, 610
SduI GDGCHC 1 cut(s) 807
SfoI GGCGCC 1 cut(s) 546
Sfr303I CCGCGG 1 cut(s) 297
SgrAI CRCCGGYG 1 cut(s) 260
SgrBI CCGCGG 1 cut(s) 297
SinI GGWCC 1 cut(s) 389
SmaI CCCGGG 1 cut(s) 394
SmiMI CAYNNNNRTG 1 cut(s) 119
SmlI CTYRAG 2 cut(s) 134, 456
SmoI CTYRAG 2 cut(s) 134, 456
Sse9I AATT 2 cut(s) 37, 464
SspDI GGCGCC 1 cut(s) 544
SspMI CTAG 1 cut(s) 647
StyD4I CCNGG 6 cut(s) 220, 350, 391, 392, 426, 608
StyI CCWWGG 2 cut(s) 120, 186
TaaI ACNGT 2 cut(s) 232, 640
TaiI ACGT 4 cut(s) 96, 335, 381, 781
TaqI TCGA 3 cut(s) 11, 29, 96
TasI AATT 2 cut(s) 37, 464
TauI GCSGC 9 cut(s) 175, 178, 215, 218, 296, 442, 445, 448, 550
TfiI GAWTC 2 cut(s) 599, 650
TscAI CASTG 2 cut(s) 645, 812
TseFI GTSAC 1 cut(s) 658
TseI GCWGC 5 cut(s) 433, 436, 565, 605, 664
Tsp45I GTSAC 1 cut(s) 658
TspGWI ACGGA 3 cut(s) 171, 207, 294
TspMI CCCGGG 1 cut(s) 392
TspRI CASTG 2 cut(s) 645, 812
VneI GTGCAC 1 cut(s) 803
VpaK11BI GGWCC 1 cut(s) 389
XmaI CCCGGG 1 cut(s) 392
XmiI GTMKAC 1 cut(s) 96
XspI CTAG 1 cut(s) 647
ZraI GACGTC 2 cut(s) 94, 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.