Rw7G031190
BZIP Family

G-box-binding factor 4-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
44501363 .. 44505168
3806 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G031190.1

Sequence Viewer

Length: 825 bp
ATGGCGTCGTCGAAGTTAGTCTCAGTCTCGACGGCCAATTCGGATCTGCCACGCGACTCCTCTATATGTTCTCTCTCCACTCTCATCGCCGACGTCGACAAGCACAACCACTCCATCACCATGGACGACCTCCTCAAGAACATCTACAACGACCAACCCTCGGCTTCTCCGCCGCCGCCTCCGTCCATGGACGGAGGAGCCTCCGCCTCGGCCGCCGCGCCGGGGAGGACGGTGGAGGAGGTCTGGAAGGAGATCGTCGCCGGCGGAGGAGGCGGAGGAGGAGCTGACGGAGAGGACGAGGCCGCGGAGGGGGAGGCGGATCAGGTGCGGGCGGAGATGACGTTGGAGGATTTTCTGACCAGGGCTGGGGCCGTGAGGGAGGAGGACGTCGGCGTGGGACCCGGGGCGGTGGTTCCGATCGGGTACGGGCAGTTCCAGGTGCAGCAGCCGCCGCCGCCGCCTCAGCCTCAAGGTCAATTGGTGTACGCAAACAACAACAATGGAACAACGAGTGGAGGTGGTGGGAGAGGAACGAAGAGGAGAGCTGTGCCGGAGGCGCCGCTTGATAAGGCGACGCAGCAGAAGCAGAGGAGGATGATCAAGAACAGAGAATCCGCTGCCAGGTCAAGGGAACGCAAGCAGGCTTACACAGTGGAGCTAGAATCTCTGGTGACGCAGCTGGAGGAGGAAAATGCACGCCTCATGAGAGAAGAGGCTGAGCAGAAGAAGGAGAGGTATAAGAAGCTCATGGAGAACCTCATTCCTGTCGTGGAGAAGAGGAGACCTGCACGTGTTCTTCGGAGAGTGCAATCTGTGCACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

274

Amino Acids

29.63

Weight (kDa)

5.81

Isoelectric Point (pI)

56.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 192 - 252 2.3e-13 bZIP transcription factor
bZIP_2 PF07716 193 - 244 5.4e-10 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 96, 390
Acc36I ACCTGC 1 cut(s) 793
AccB1I GGYRCC 1 cut(s) 556
AccI GTMKAC 1 cut(s) 96
AccII CGCG 3 cut(s) 54, 218, 305
AclWI GGATC 2 cut(s) 51, 327
AcoI YGGCCR 2 cut(s) 33, 210
AcvI CACGTG 1 cut(s) 791
AcyI GRCGYC 4 cut(s) 5, 93, 387, 557
AfaI GTAC 2 cut(s) 425, 485
AfiI CCNNNNNNNGG 6 cut(s) 160, 222, 309, 366, 621, 627
AflIII ACRYGT 1 cut(s) 790
AjnI CCWGG 3 cut(s) 359, 435, 620
AloI GAACNNNNNNTCC 2 cut(s) 596, 628
AluBI AGCT 5 cut(s) 284, 545, 658, 679, 745
AluI AGCT 5 cut(s) 284, 545, 658, 679, 745
Alw21I GWGCWC 1 cut(s) 819
Alw26I GTCTC 3 cut(s) 25, 31, 775
Alw44I GTGCAC 1 cut(s) 815
AlwI GGATC 2 cut(s) 51, 327
Ama87I CYCGRG 1 cut(s) 401
AoxI GGCC 4 cut(s) 33, 210, 300, 369
ApaLI GTGCAC 1 cut(s) 815
ApeKI GCWGC 5 cut(s) 442, 445, 577, 617, 676
ArsI GACNNNNNNTTYG 2 cut(s) 22, 54
AspLEI GCGC 2 cut(s) 220, 559
AspS9I GGNCC 2 cut(s) 369, 398
AsuC2I CCSGG 3 cut(s) 222, 402, 403
AsuHPI GGTGA 2 cut(s) 109, 682
AvaI CYCGRG 1 cut(s) 401
AvaII GGWCC 1 cut(s) 398
BaeGI GKGCMC 1 cut(s) 819
BanI GGYRCC 1 cut(s) 556
BbrPI CACGTG 1 cut(s) 791
Bbv12I GWGCWC 1 cut(s) 819
BbvCI CCTCAGC 1 cut(s) 462
BbvI GCAGC 5 cut(s) 454, 457, 589, 604, 688
BccI CCATC 1 cut(s) 122
BceAI ACGGC 2 cut(s) 48, 356
BciT130I CCWGG 3 cut(s) 361, 437, 622
BclI TGATCA 1 cut(s) 597
BcnI CCSGG 3 cut(s) 222, 402, 403
BcoDI GTCTC 3 cut(s) 25, 31, 775
BfaI CTAG 1 cut(s) 659
BfoI RGCGCY 1 cut(s) 560
BfuAI ACCTGC 1 cut(s) 793
BlpI GCTNAGC 1 cut(s) 717
Bme1390I CCNGG 6 cut(s) 222, 361, 402, 403, 437, 622
Bme18I GGWCC 1 cut(s) 398
BmeT110I CYCGRG 1 cut(s) 401
BmgT120I GGNCC 2 cut(s) 369, 398
BmiI GGNNCC 6 cut(s) 199, 370, 399, 400, 414, 558
BmrFI CCNGG 6 cut(s) 222, 361, 402, 403, 437, 622
BpmI CTGGAG 1 cut(s) 701
Bpu10I CCTNAGC 1 cut(s) 462
Bpu1102I GCTNAGC 1 cut(s) 717
BpuEI CTTGAG 2 cut(s) 119, 453
BpuMI CCSGG 3 cut(s) 222, 402, 403
BsaAI YACGTR 1 cut(s) 791
BsaHI GRCGYC 4 cut(s) 5, 93, 387, 557
BsaI GGTCTC 1 cut(s) 775
BsaJI CCNNGG 9 cut(s) 120, 159, 186, 207, 221, 303, 360, 401, 402
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 326, 356
Bsc4I CCNNNNNNNGG 6 cut(s) 160, 222, 309, 366, 621, 627
Bse118I RCCGGY 1 cut(s) 260
Bse1I ACTGG 1 cut(s) 824
BseBI CCWGG 3 cut(s) 361, 437, 622
BseDI CCNNGG 9 cut(s) 120, 159, 186, 207, 221, 303, 360, 401, 402
BseGI GGATG 1 cut(s) 600
BseLI CCNNNNNNNGG 6 cut(s) 160, 222, 309, 366, 621, 627
BseMII CTCAG 3 cut(s) 36, 476, 708
BseNI ACTGG 1 cut(s) 824
BseSI GKGCMC 1 cut(s) 819
BseX3I CGGCCG 1 cut(s) 210
BseXI GCAGC 5 cut(s) 454, 457, 589, 604, 688
BseYI CCCAGC 1 cut(s) 365
BsgI GTGCAG 2 cut(s) 461, 771
Bsh1236I CGCG 3 cut(s) 54, 218, 305
Bsh1285I CGRYCG 2 cut(s) 213, 420
BshFI GGCC 4 cut(s) 35, 212, 302, 371
BshNI GGYRCC 1 cut(s) 556
BsiEI CGRYCG 2 cut(s) 213, 420
BsiHKAI GWGCWC 1 cut(s) 819
BsiHKCI CYCGRG 1 cut(s) 401
BsiSI CCGG 4 cut(s) 221, 261, 402, 551
BslFI GGGAC 1 cut(s) 411
BslI CCNNNNNNNGG 6 cut(s) 160, 222, 309, 366, 621, 627
BsmAI GTCTC 3 cut(s) 25, 31, 775
BsmFI GGGAC 1 cut(s) 411
BsnI GGCC 4 cut(s) 35, 212, 302, 371
Bso31I GGTCTC 1 cut(s) 775
BsoBI CYCGRG 1 cut(s) 401
Bsp1286I GDGCHC 1 cut(s) 819
Bsp143I GATC 5 cut(s) 43, 252, 319, 417, 597
Bsp1720I GCTNAGC 1 cut(s) 717
Bsp19I CCATGG 2 cut(s) 120, 186
BspANI GGCC 4 cut(s) 35, 212, 302, 371
BspCNI CTCAG 3 cut(s) 35, 475, 709
BspFNI CGCG 3 cut(s) 54, 218, 305
BspHI TCATGA 1 cut(s) 702
BspLI GGNNCC 6 cut(s) 199, 370, 399, 400, 414, 558
BspMI ACCTGC 1 cut(s) 793
BspPI GGATC 2 cut(s) 51, 327
BspT107I GGYRCC 1 cut(s) 556
BspTNI GGTCTC 1 cut(s) 775
BsrFI RCCGGY 1 cut(s) 260
BsrI ACTGG 1 cut(s) 824
BssAI RCCGGY 1 cut(s) 260
BssECI CCNNGG 9 cut(s) 120, 159, 186, 207, 221, 303, 360, 401, 402
BssMI GATC 5 cut(s) 43, 252, 319, 417, 597
BssNI GRCGYC 4 cut(s) 5, 93, 387, 557
BssT1I CCWWGG 2 cut(s) 120, 186
Bst2UI CCWGG 3 cut(s) 361, 437, 622
Bst4CI ACNGT 2 cut(s) 232, 652
Bst6I CTCTTC 3 cut(s) 530, 705, 770
BstACI GRCGYC 4 cut(s) 5, 93, 387, 557
BstAPI GCANNNNNTGC 1 cut(s) 814
BstBAI YACGTR 1 cut(s) 791
BstC8I GCNNGC 5 cut(s) 262, 330, 638, 642, 697
BstDEI CTNAG 3 cut(s) 22, 462, 717
BstDSI CCRYGG 3 cut(s) 120, 186, 303
BstF5I GGATG 1 cut(s) 600
BstFNI CGCG 3 cut(s) 54, 218, 305
BstH2I RGCGCY 1 cut(s) 560
BstHHI GCGC 2 cut(s) 220, 559
BstKTI GATC 5 cut(s) 46, 255, 322, 420, 600
BstMAI GTCTC 3 cut(s) 25, 31, 775
BstMBI GATC 5 cut(s) 43, 252, 319, 417, 597
BstMCI CGRYCG 2 cut(s) 213, 420
BstNI CCWGG 3 cut(s) 361, 437, 622
BstSCI CCNGG 6 cut(s) 220, 359, 400, 401, 435, 620
BstSLI GKGCMC 1 cut(s) 819
BstUI CGCG 3 cut(s) 54, 218, 305
BstV1I GCAGC 5 cut(s) 454, 457, 589, 604, 688
BstX2I RGATCY 1 cut(s) 43
BstXI CCANNNNNNTGG 1 cut(s) 121
BstYI RGATCY 1 cut(s) 43
BstZI CGGCCG 1 cut(s) 210
BsuRI GGCC 4 cut(s) 35, 212, 302, 371
BtgI CCRYGG 3 cut(s) 120, 186, 303
BtgZI GCGATG 1 cut(s) 70
BtsCI GGATG 1 cut(s) 600
BtsIMutI CAGTG 2 cut(s) 657, 817
BveI ACCTGC 1 cut(s) 793
Cac8I GCNNGC 5 cut(s) 262, 330, 638, 642, 697
CciI TCATGA 1 cut(s) 702
CfoI GCGC 2 cut(s) 220, 559
Cfr10I RCCGGY 1 cut(s) 260
Cfr13I GGNCC 2 cut(s) 369, 398
Cfr42I CCGCGG 1 cut(s) 306
Cfr9I CCCGGG 1 cut(s) 401
CseI GACGC 2 cut(s) 583, 682
Csp6I GTAC 2 cut(s) 424, 484
CviAII CATG 4 cut(s) 121, 187, 703, 748
CviQI GTAC 2 cut(s) 424, 484
DdeI CTNAG 3 cut(s) 22, 462, 717
DinI GGCGCC 1 cut(s) 558
DpnI GATC 5 cut(s) 45, 254, 321, 419, 599
DpnII GATC 5 cut(s) 43, 252, 319, 417, 597
EaeI YGGCCR 2 cut(s) 33, 210
EagI CGGCCG 1 cut(s) 210
Eam1104I CTCTTC 3 cut(s) 530, 705, 770
EarI CTCTTC 3 cut(s) 530, 705, 770
EciI GGCGGA 6 cut(s) 159, 193, 279, 288, 332, 347
EclXI CGGCCG 1 cut(s) 210
Eco130I CCWWGG 2 cut(s) 120, 186
Eco31I GGTCTC 1 cut(s) 775
Eco47I GGWCC 1 cut(s) 398
Eco52I CGGCCG 1 cut(s) 210
Eco72I CACGTG 1 cut(s) 791
Eco88I CYCGRG 1 cut(s) 401
EcoO109I RGGNCCY 1 cut(s) 398
EcoRII CCWGG 3 cut(s) 359, 435, 620
EcoT14I CCWWGG 2 cut(s) 120, 186
EgeI GGCGCC 1 cut(s) 558
EheI GGCGCC 1 cut(s) 558
ErhI CCWWGG 2 cut(s) 120, 186
FaeI CATG 4 cut(s) 124, 190, 706, 751
FaiI YATR 7 cut(s) 65, 67, 122, 188, 704, 738, 749
FaqI GGGAC 1 cut(s) 411
FatI CATG 4 cut(s) 120, 186, 702, 747
FauI CCCGC 1 cut(s) 321
FbaI TGATCA 1 cut(s) 597
FblI GTMKAC 1 cut(s) 96
FokI GGATG 1 cut(s) 607
FspBI CTAG 1 cut(s) 659
GlaI GCGC 2 cut(s) 219, 558
GsaI CCCAGC 1 cut(s) 369
GsuI CTGGAG 1 cut(s) 701
HaeII RGCGCY 1 cut(s) 560
HaeIII GGCC 4 cut(s) 35, 212, 302, 371
HapII CCGG 4 cut(s) 221, 261, 402, 551
HgaI GACGC 2 cut(s) 583, 682
HhaI GCGC 2 cut(s) 220, 559
Hin1I GRCGYC 4 cut(s) 5, 93, 387, 557
Hin1II CATG 4 cut(s) 124, 190, 706, 751
Hin6I GCGC 2 cut(s) 218, 557
HinP1I GCGC 2 cut(s) 218, 557
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HinfI GANTC 3 cut(s) 56, 611, 662
HpaII CCGG 4 cut(s) 221, 261, 402, 551
HphI GGTGA 2 cut(s) 109, 682
Hpy166II GTNNAC 3 cut(s) 97, 484, 817
Hpy188I TCNGA 4 cut(s) 43, 357, 417, 801
Hpy188III TCNNGA 5 cut(s) 28, 136, 244, 601, 703
Hpy8I GTNNAC 3 cut(s) 97, 484, 817
Hpy99I CGWCG 8 cut(s) 10, 13, 34, 95, 98, 260, 392, 577
HpyAV CCTTC 2 cut(s) 241, 721
HpyCH4III ACNGT 2 cut(s) 232, 652
HpyCH4IV ACGT 4 cut(s) 93, 341, 387, 790
HpyCH4V TGCA 5 cut(s) 442, 695, 788, 808, 817
HpyF3I CTNAG 3 cut(s) 22, 462, 717
HpySE526I ACGT 4 cut(s) 93, 341, 387, 790
Hsp92I GRCGYC 4 cut(s) 5, 93, 387, 557
Hsp92II CATG 4 cut(s) 124, 190, 706, 751
HspAI GCGC 2 cut(s) 218, 557
KasI GGCGCC 1 cut(s) 556
KflI GGGWCCC 1 cut(s) 398
KroI GCCGGC 1 cut(s) 260
KroNI GCCGGC 1 cut(s) 262
Ksp22I TGATCA 1 cut(s) 597
KspI CCGCGG 1 cut(s) 306
Kzo9I GATC 5 cut(s) 43, 252, 319, 417, 597
LmnI GCTCC 3 cut(s) 197, 281, 655
Lsp1109I GCAGC 5 cut(s) 454, 457, 589, 604, 688
MaeI CTAG 1 cut(s) 659
MaeII ACGT 4 cut(s) 93, 341, 387, 790
MaeIII GTNAC 1 cut(s) 670
MalI GATC 5 cut(s) 45, 254, 321, 419, 599
MboI GATC 5 cut(s) 43, 252, 319, 417, 597
MboII GAAGA 5 cut(s) 547, 722, 736, 787, 788
MfeI CAATTG 1 cut(s) 476
MflI RGATCY 1 cut(s) 43
MhlI GDGCHC 1 cut(s) 819
MluCI AATT 2 cut(s) 37, 476
Mly113I GGCGCC 1 cut(s) 557
MlyI GAGTC 1 cut(s) 50
MmeI TCCRAC 1 cut(s) 324
MreI CGCCGGCG 1 cut(s) 260
MroNI GCCGGC 1 cut(s) 260
MslI CAYNNNNRTG 1 cut(s) 119
MspA1I CMGCKG 3 cut(s) 305, 617, 679
MspI CCGG 4 cut(s) 221, 261, 402, 551
MspR9I CCNGG 6 cut(s) 222, 361, 402, 403, 437, 622
MunI CAATTG 1 cut(s) 476
MvaI CCWGG 3 cut(s) 361, 437, 622
MvnI CGCG 3 cut(s) 54, 218, 305
NaeI GCCGGC 1 cut(s) 262
NarI GGCGCC 1 cut(s) 557
NciI CCSGG 3 cut(s) 222, 402, 403
NcoI CCATGG 2 cut(s) 120, 186
NdeII GATC 5 cut(s) 43, 252, 319, 417, 597
NgoMIV GCCGGC 1 cut(s) 260
NlaIII CATG 4 cut(s) 124, 190, 706, 751
NlaIV GGNNCC 6 cut(s) 199, 370, 399, 400, 414, 558
NmeAIII GCCGAG 2 cut(s) 140, 188
NmuCI GTSAC 1 cut(s) 670
PagI TCATGA 1 cut(s) 702
PcsI WCGNNNNNNNCGW 2 cut(s) 93, 294
PdiI GCCGGC 1 cut(s) 262
PfeI GAWTC 2 cut(s) 611, 662
Ple19I CGATCG 1 cut(s) 420
PleI GAGTC 1 cut(s) 50
PluTI GGCGCC 1 cut(s) 560
PmaCI CACGTG 1 cut(s) 791
PmlI CACGTG 1 cut(s) 791
PpsI GAGTC 1 cut(s) 50
Ppu21I YACGTR 1 cut(s) 791
PpuMI RGGWCCY 1 cut(s) 398
Psp5II RGGWCCY 1 cut(s) 398
Psp6I CCWGG 3 cut(s) 359, 435, 620
PspCI CACGTG 1 cut(s) 791
PspFI CCCAGC 1 cut(s) 365
PspGI CCWGG 3 cut(s) 359, 435, 620
PspN4I GGNNCC 6 cut(s) 199, 370, 399, 400, 414, 558
PspPI GGNCC 2 cut(s) 369, 398
PspPPI RGGWCCY 1 cut(s) 398
PsrI GAACNNNNNNTAC 2 cut(s) 416, 448
PsuI RGATCY 1 cut(s) 43
PvuI CGATCG 1 cut(s) 420
PvuII CAGCTG 1 cut(s) 679
RsaI GTAC 2 cut(s) 425, 485
RsaNI GTAC 2 cut(s) 424, 484
RseI CAYNNNNRTG 1 cut(s) 119
SacII CCGCGG 1 cut(s) 306
SalI GTCGAC 1 cut(s) 95
Sau3AI GATC 5 cut(s) 43, 252, 319, 417, 597
Sau96I GGNCC 2 cut(s) 369, 398
SchI GAGTC 1 cut(s) 50
ScrFI CCNGG 6 cut(s) 222, 361, 402, 403, 437, 622
SduI GDGCHC 1 cut(s) 819
SfoI GGCGCC 1 cut(s) 558
Sfr303I CCGCGG 1 cut(s) 306
SgrAI CRCCGGYG 1 cut(s) 260
SgrBI CCGCGG 1 cut(s) 306
SinI GGWCC 1 cut(s) 398
SmaI CCCGGG 1 cut(s) 403
SmiMI CAYNNNNRTG 1 cut(s) 119
SmlI CTYRAG 2 cut(s) 134, 468
SmoI CTYRAG 2 cut(s) 134, 468
Sse9I AATT 2 cut(s) 37, 476
SspDI GGCGCC 1 cut(s) 556
SspMI CTAG 1 cut(s) 659
StyD4I CCNGG 6 cut(s) 220, 359, 400, 401, 435, 620
StyI CCWWGG 2 cut(s) 120, 186
TaaI ACNGT 2 cut(s) 232, 652
TaiI ACGT 4 cut(s) 96, 344, 390, 793
TaqI TCGA 3 cut(s) 11, 29, 96
TasI AATT 2 cut(s) 37, 476
TfiI GAWTC 2 cut(s) 611, 662
TscAI CASTG 2 cut(s) 657, 824
TseFI GTSAC 1 cut(s) 670
TseI GCWGC 5 cut(s) 442, 445, 577, 617, 676
Tsp45I GTSAC 1 cut(s) 670
TspGWI ACGGA 3 cut(s) 171, 207, 303
TspMI CCCGGG 1 cut(s) 401
TspRI CASTG 2 cut(s) 657, 824
VneI GTGCAC 1 cut(s) 815
VpaK11BI GGWCC 1 cut(s) 398
XmaI CCCGGG 1 cut(s) 401
XmiI GTMKAC 1 cut(s) 96
XspI CTAG 1 cut(s) 659
ZraI GACGTC 2 cut(s) 94, 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.