MD15G1417900.v1.1
BZIP Family

G-box-binding factor 4-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
51972021 .. 51975089
3069 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1417900.v1.1.491

Sequence Viewer

Length: 897 bp
ATGATGGCGGCGTCTTCGAAGATGGTGGTGGTTTCAACCACGAATTCGGATCTGCCGCGGAGAGAGTCTATATGTTCCCTCTCCACTCTCATGGCTGACAACGACGACGACCATCGCAAGCATCCGTCTATTACCATGGACGACATCCTCAAGAACATCTACAGCTCCACTGCCACCAACGACATGGACGACAACGATCATCATCAGCAACATCAGCAACATCAGCATCACGCCGAGCCGAGGTCCGTCGACGACGTCTGGAAGGAGATCGTCGCCGGCGGAGTGGGAGTGGGAATGGGAGAGGAGGAGGAGGGAACGGCCGAGGGAGACGGCGGGGATCAGGTGCGGGCAGGAGAAGGAGGCGGTGGCGGTGGGATGGAGGAGATGACCTTGGAGGACTTTCTCACCAGGGCTAGGGCCGTGAGGGAAGAGGACGTCAACGTGACTGCCAGCGGAGTTCCGATTGGGTACGGGCAGTTCCAGGTGCAGCCTCCTCCTCCTCCTCCTCCTCCCCCGCCTCCAGCTGCTCAGGGTCAGCTGGTGTACGCGAACGGGACGACGAGTGGAGGCGGAGGCAGAGGAGGTGGCGGAGGAGGGAGAGCTGGAAAGAGGAGAGTGGTGCAGGAGGCTCCGCTGGATAAGGCGACGCAGCAGAAGCAGAGGAGGATGATCAAGAACAGAGAATCCGCTGCTCGGTCCAGGGAACGGAAGCAGGCTTACACCGTAGAGCTCGAATCTCTGGTAACGCAGCTGGAGGAGGAAAATGCGCGGCTCCTCAGACAACAGGCCGAGCAGAAGAAGGAGAGGTTTAAGCGGCTCATGGAGAACCTCATTCCTATCGTAGAGAAGCGGAGACCACCACGTGTTCTTCGCAGAGTACATTCGATGCACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

299

Amino Acids

32.79

Weight (kDa)

6.23

Isoelectric Point (pI)

61.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 216 - 274 6e-12 bZIP transcription factor
bZIP_2 PF07716 217 - 268 4e-11 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 258, 438
AccI GTMKAC 1 cut(s) 249
AccII CGCG 3 cut(s) 58, 548, 769
AclWI GGATC 2 cut(s) 57, 345
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 1 cut(s) 43
AcvI CACGTG 1 cut(s) 863
AcyI GRCGYC 3 cut(s) 11, 255, 435
AdeI CACNNNGTG 1 cut(s) 863
AfaI GTAC 3 cut(s) 470, 545, 879
AfiI CCNNNNNNNGG 4 cut(s) 240, 414, 693, 705
AflIII ACRYGT 1 cut(s) 862
AgsI TTSAA 1 cut(s) 36
AjnI CCWGG 3 cut(s) 407, 480, 698
AloI GAACNNNNNNTCC 2 cut(s) 668, 700
AluBI AGCT 6 cut(s) 165, 524, 538, 602, 730, 751
AluI AGCT 6 cut(s) 165, 524, 538, 602, 730, 751
Alw21I GWGCWC 1 cut(s) 732
Alw26I GTCTC 2 cut(s) 321, 847
AlwI GGATC 2 cut(s) 57, 345
AoxI GGCC 3 cut(s) 318, 417, 786
ApeKI GCWGC 5 cut(s) 487, 524, 649, 689, 748
ApoI RAATTY 1 cut(s) 43
AspLEI GCGC 1 cut(s) 769
AspS9I GGNCC 3 cut(s) 243, 417, 696
AsuHPI GGTGA 1 cut(s) 397
AsuII TTCGAA 1 cut(s) 17
AvaII GGWCC 2 cut(s) 243, 696
BanII GRGCYC 1 cut(s) 732
BarI GAAGNNNNNNTAC 2 cut(s) 701, 733
BbrPI CACGTG 1 cut(s) 863
BbsI GAAGAC 1 cut(s) 6
Bbv12I GWGCWC 1 cut(s) 732
BbvI GCAGC 5 cut(s) 499, 511, 661, 676, 760
BccI CCATC 3 cut(s) 16, 120, 370
BceAI ACGGC 3 cut(s) 333, 346, 404
BciT130I CCWGG 3 cut(s) 409, 482, 700
BclI TGATCA 1 cut(s) 669
BcoDI GTCTC 2 cut(s) 321, 847
BfaI CTAG 1 cut(s) 414
BfmI CTRYAG 1 cut(s) 160
BisI GCNGC 9 cut(s) 9, 56, 488, 525, 650, 690, 749, 770, 815
BlsI GCNGC 9 cut(s) 10, 57, 489, 526, 651, 691, 750, 771, 816
Bme1390I CCNGG 3 cut(s) 409, 482, 700
Bme18I GGWCC 2 cut(s) 243, 696
BmgT120I GGNCC 3 cut(s) 243, 417, 696
BmiI GGNNCC 2 cut(s) 630, 773
BmrFI CCNGG 3 cut(s) 409, 482, 700
BmsI GCATC 3 cut(s) 130, 235, 876
BpiI GAAGAC 1 cut(s) 6
BpmI CTGGAG 2 cut(s) 504, 773
Bpu10I CCTNAGC 1 cut(s) 528
Bpu14I TTCGAA 1 cut(s) 17
BpuEI CTTGAG 1 cut(s) 134
BsaAI YACGTR 1 cut(s) 863
BsaBI GATNNNNATC 1 cut(s) 201
BsaHI GRCGYC 3 cut(s) 11, 255, 435
BsaI GGTCTC 1 cut(s) 847
BsaJI CCNNGG 7 cut(s) 56, 135, 239, 321, 390, 408, 699
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 4 cut(s) 240, 414, 693, 705
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 1 cut(s) 896
Bse8I GATNNNNATC 1 cut(s) 201
BseBI CCWGG 3 cut(s) 409, 482, 700
BseDI CCNNGG 7 cut(s) 56, 135, 239, 321, 390, 408, 699
BseGI GGATG 4 cut(s) 121, 144, 381, 672
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 4 cut(s) 240, 414, 693, 705
BseMII CTCAG 2 cut(s) 542, 790
BseNI ACTGG 1 cut(s) 896
BseX3I CGGCCG 1 cut(s) 318
BseXI GCAGC 5 cut(s) 499, 511, 661, 676, 760
BsgI GTGCAG 2 cut(s) 506, 641
Bsh1236I CGCG 3 cut(s) 58, 548, 769
Bsh1285I CGRYCG 1 cut(s) 321
BshFI GGCC 3 cut(s) 320, 419, 788
BsiEI CGRYCG 1 cut(s) 321
BsiHKAI GWGCWC 1 cut(s) 732
BsiSI CCGG 1 cut(s) 276
BslFI GGGAC 1 cut(s) 568
BslI CCNNNNNNNGG 4 cut(s) 240, 414, 693, 705
BsmAI GTCTC 2 cut(s) 321, 847
BsmBI CGTCTC 1 cut(s) 321
BsmFI GGGAC 1 cut(s) 568
BsnI GGCC 3 cut(s) 320, 419, 788
Bso31I GGTCTC 1 cut(s) 847
Bsp119I TTCGAA 1 cut(s) 17
Bsp1286I GDGCHC 1 cut(s) 732
Bsp143I GATC 5 cut(s) 49, 196, 267, 337, 669
Bsp19I CCATGG 1 cut(s) 135
BspANI GGCC 3 cut(s) 320, 419, 788
BspCNI CTCAG 2 cut(s) 541, 789
BspFNI CGCG 3 cut(s) 58, 548, 769
BspLI GGNNCC 2 cut(s) 630, 773
BspPI GGATC 2 cut(s) 57, 345
BspT104I TTCGAA 1 cut(s) 17
BspTNI GGTCTC 1 cut(s) 847
BsrFI RCCGGY 1 cut(s) 275
BsrI ACTGG 1 cut(s) 896
BssAI RCCGGY 1 cut(s) 275
BssECI CCNNGG 7 cut(s) 56, 135, 239, 321, 390, 408, 699
BssMI GATC 5 cut(s) 49, 196, 267, 337, 669
BssNI GRCGYC 3 cut(s) 11, 255, 435
BssT1I CCWWGG 2 cut(s) 135, 390
Bst2UI CCWGG 3 cut(s) 409, 482, 700
Bst4CI ACNGT 1 cut(s) 724
Bst6I CTCTTC 1 cut(s) 423
BstACI GRCGYC 3 cut(s) 11, 255, 435
BstBAI YACGTR 1 cut(s) 863
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 5 cut(s) 119, 277, 348, 451, 714
BstDEI CTNAG 2 cut(s) 528, 776
BstDSI CCRYGG 2 cut(s) 56, 135
BstF5I GGATG 4 cut(s) 121, 144, 381, 672
BstFNI CGCG 3 cut(s) 58, 548, 769
BstHHI GCGC 1 cut(s) 769
BstKTI GATC 5 cut(s) 52, 199, 270, 340, 672
BstMAI GTCTC 2 cut(s) 321, 847
BstMBI GATC 5 cut(s) 49, 196, 267, 337, 669
BstMCI CGRYCG 1 cut(s) 321
BstMWI GCNNNNNNNGC 3 cut(s) 214, 223, 655
BstNI CCWGG 3 cut(s) 409, 482, 700
BstSCI CCNGG 3 cut(s) 407, 480, 698
BstSFI CTRYAG 1 cut(s) 160
BstUI CGCG 3 cut(s) 58, 548, 769
BstV1I GCAGC 5 cut(s) 499, 511, 661, 676, 760
BstV2I GAAGAC 1 cut(s) 6
BstX2I RGATCY 1 cut(s) 49
BstXI CCANNNNNNTGG 2 cut(s) 91, 184
BstYI RGATCY 1 cut(s) 49
BstZI CGGCCG 1 cut(s) 318
BsuRI GGCC 3 cut(s) 320, 419, 788
BtgI CCRYGG 2 cut(s) 56, 135
BtgZI GCGATG 1 cut(s) 98
BtsCI GGATG 4 cut(s) 121, 144, 381, 672
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 2 cut(s) 168, 889
Cac8I GCNNGC 5 cut(s) 119, 277, 348, 451, 714
CfoI GCGC 1 cut(s) 769
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 3 cut(s) 243, 417, 696
Cfr42I CCGCGG 1 cut(s) 59
CseI GACGC 1 cut(s) 655
Csp6I GTAC 3 cut(s) 469, 544, 878
CviAII CATG 4 cut(s) 91, 136, 184, 820
CviQI GTAC 3 cut(s) 469, 544, 878
DdeI CTNAG 2 cut(s) 528, 776
DpnI GATC 5 cut(s) 51, 198, 269, 339, 671
DpnII GATC 5 cut(s) 49, 196, 267, 337, 669
DraIII CACNNNGTG 1 cut(s) 863
EaeI YGGCCR 1 cut(s) 318
EagI CGGCCG 1 cut(s) 318
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
EciI GGCGGA 3 cut(s) 294, 585, 603
Ecl136II GAGCTC 1 cut(s) 730
EclXI CGGCCG 1 cut(s) 318
Eco130I CCWWGG 2 cut(s) 135, 390
Eco24I GRGCYC 1 cut(s) 732
Eco31I GGTCTC 1 cut(s) 847
Eco47I GGWCC 2 cut(s) 243, 696
Eco52I CGGCCG 1 cut(s) 318
Eco53kI GAGCTC 1 cut(s) 730
Eco72I CACGTG 1 cut(s) 863
EcoICRI GAGCTC 1 cut(s) 730
EcoRI GAATTC 1 cut(s) 43
EcoRII CCWGG 3 cut(s) 407, 480, 698
EcoT14I CCWWGG 2 cut(s) 135, 390
EcoT38I GRGCYC 1 cut(s) 732
ErhI CCWWGG 2 cut(s) 135, 390
Esp3I CGTCTC 1 cut(s) 321
FaeI CATG 4 cut(s) 94, 139, 187, 823
FaiI YATR 6 cut(s) 71, 73, 92, 137, 185, 821
FaqI GGGAC 1 cut(s) 568
FatI CATG 4 cut(s) 90, 135, 183, 819
FauI CCCGC 3 cut(s) 326, 339, 522
FbaI TGATCA 1 cut(s) 669
FblI GTMKAC 1 cut(s) 249
Fnu4HI GCNGC 9 cut(s) 9, 56, 488, 525, 650, 690, 749, 770, 815
FokI GGATG 4 cut(s) 108, 131, 388, 679
FriOI GRGCYC 1 cut(s) 732
Fsp4HI GCNGC 9 cut(s) 9, 56, 488, 525, 650, 690, 749, 770, 815
FspBI CTAG 1 cut(s) 414
GlaI GCGC 1 cut(s) 768
GluI GCNGC 9 cut(s) 9, 56, 488, 525, 650, 690, 749, 770, 815
GsuI CTGGAG 2 cut(s) 504, 773
HaeIII GGCC 3 cut(s) 320, 419, 788
HapII CCGG 1 cut(s) 276
HgaI GACGC 1 cut(s) 655
HhaI GCGC 1 cut(s) 769
Hin1I GRCGYC 3 cut(s) 11, 255, 435
Hin1II CATG 4 cut(s) 94, 139, 187, 823
Hin6I GCGC 1 cut(s) 767
HinP1I GCGC 1 cut(s) 767
HincII GTYRAC 2 cut(s) 250, 439
HindII GTYRAC 2 cut(s) 250, 439
HinfI GANTC 3 cut(s) 65, 683, 734
HpaII CCGG 1 cut(s) 276
HphI GGTGA 1 cut(s) 397
Hpy166II GTNNAC 3 cut(s) 250, 439, 544
Hpy188I TCNGA 3 cut(s) 49, 462, 779
Hpy188III TCNNGA 3 cut(s) 151, 259, 673
Hpy8I GTNNAC 3 cut(s) 250, 439, 544
Hpy99I CGWCG 8 cut(s) 107, 110, 251, 254, 257, 275, 562, 649
HpyAV CCTTC 3 cut(s) 256, 350, 793
HpyCH4III ACNGT 1 cut(s) 724
HpyCH4IV ACGT 4 cut(s) 255, 435, 441, 862
HpyCH4V TGCA 3 cut(s) 487, 622, 889
HpyF10VI GCNNNNNNNGC 3 cut(s) 214, 223, 655
HpyF3I CTNAG 2 cut(s) 528, 776
HpySE526I ACGT 4 cut(s) 255, 435, 441, 862
Hsp92I GRCGYC 3 cut(s) 11, 255, 435
Hsp92II CATG 4 cut(s) 94, 139, 187, 823
HspAI GCGC 1 cut(s) 767
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 669
KspI CCGCGG 1 cut(s) 59
Kzo9I GATC 5 cut(s) 49, 196, 267, 337, 669
LmnI GCTCC 3 cut(s) 170, 634, 777
Lsp1109I GCAGC 5 cut(s) 499, 511, 661, 676, 760
LweI GCATC 3 cut(s) 130, 235, 876
MaeI CTAG 1 cut(s) 414
MaeII ACGT 4 cut(s) 255, 435, 441, 862
MaeIII GTNAC 2 cut(s) 442, 742
MalI GATC 5 cut(s) 51, 198, 269, 339, 671
MboI GATC 5 cut(s) 49, 196, 267, 337, 669
MboII GAAGA 5 cut(s) 6, 31, 440, 808, 860
MflI RGATCY 1 cut(s) 49
MhlI GDGCHC 1 cut(s) 732
MluCI AATT 1 cut(s) 43
MlyI GAGTC 1 cut(s) 74
MreI CGCCGGCG 1 cut(s) 275
MroNI GCCGGC 1 cut(s) 275
MseI TTAA 1 cut(s) 810
MslI CAYNNNNRTG 1 cut(s) 89
MspA1I CMGCKG 7 cut(s) 58, 453, 524, 538, 634, 689, 751
MspI CCGG 1 cut(s) 276
MspR9I CCNGG 3 cut(s) 409, 482, 700
MvaI CCWGG 3 cut(s) 409, 482, 700
MvnI CGCG 3 cut(s) 58, 548, 769
MwoI GCNNNNNNNGC 3 cut(s) 214, 223, 655
NaeI GCCGGC 1 cut(s) 277
NcoI CCATGG 1 cut(s) 135
NdeII GATC 5 cut(s) 49, 196, 267, 337, 669
NgoMIV GCCGGC 1 cut(s) 275
NlaIII CATG 4 cut(s) 94, 139, 187, 823
NlaIV GGNNCC 2 cut(s) 630, 773
NmeAIII GCCGAG 4 cut(s) 259, 264, 346, 814
NmuCI GTSAC 1 cut(s) 442
NspV TTCGAA 1 cut(s) 17
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PdiI GCCGGC 1 cut(s) 277
PfeI GAWTC 2 cut(s) 683, 734
PflFI GACNNNGTC 1 cut(s) 254
PkrI GCNGC 9 cut(s) 10, 57, 489, 526, 651, 691, 750, 771, 816
PleI GAGTC 1 cut(s) 73
PmaCI CACGTG 1 cut(s) 863
PmlI CACGTG 1 cut(s) 863
PpsI GAGTC 1 cut(s) 73
Ppu21I YACGTR 1 cut(s) 863
Psp124BI GAGCTC 1 cut(s) 732
Psp6I CCWGG 3 cut(s) 407, 480, 698
PspCI CACGTG 1 cut(s) 863
PspGI CCWGG 3 cut(s) 407, 480, 698
PspN4I GGNNCC 2 cut(s) 630, 773
PspPI GGNCC 3 cut(s) 243, 417, 696
PsrI GAACNNNNNNTAC 2 cut(s) 461, 493
PsuI RGATCY 1 cut(s) 49
PsyI GACNNNGTC 1 cut(s) 254
PvuII CAGCTG 3 cut(s) 524, 538, 751
RsaI GTAC 3 cut(s) 470, 545, 879
RsaNI GTAC 3 cut(s) 469, 544, 878
RseI CAYNNNNRTG 1 cut(s) 89
SacI GAGCTC 1 cut(s) 732
SacII CCGCGG 1 cut(s) 59
SalI GTCGAC 1 cut(s) 248
SaqAI TTAA 1 cut(s) 810
SatI GCNGC 9 cut(s) 9, 56, 488, 525, 650, 690, 749, 770, 815
Sau3AI GATC 5 cut(s) 49, 196, 267, 337, 669
Sau96I GGNCC 3 cut(s) 243, 417, 696
SchI GAGTC 1 cut(s) 74
ScrFI CCNGG 3 cut(s) 409, 482, 700
SduI GDGCHC 1 cut(s) 732
SfaNI GCATC 3 cut(s) 130, 235, 876
SfcI CTRYAG 1 cut(s) 160
Sfr303I CCGCGG 1 cut(s) 59
SfuI TTCGAA 1 cut(s) 17
SgrAI CRCCGGYG 1 cut(s) 275
SgrBI CCGCGG 1 cut(s) 59
SgrDI CGTCGACG 1 cut(s) 248
SinI GGWCC 2 cut(s) 243, 696
SmiMI CAYNNNNRTG 1 cut(s) 89
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 1 cut(s) 43
SspMI CTAG 1 cut(s) 414
SstI GAGCTC 1 cut(s) 732
StyD4I CCNGG 3 cut(s) 407, 480, 698
StyI CCWWGG 2 cut(s) 135, 390
TaaI ACNGT 1 cut(s) 724
TaiI ACGT 4 cut(s) 258, 438, 444, 865
TaqI TCGA 4 cut(s) 17, 249, 732, 884
TaqII GACCGA 1 cut(s) 684
TasI AATT 1 cut(s) 43
TatI WGTACW 1 cut(s) 877
TauI GCSGC 4 cut(s) 11, 58, 772, 817
TfiI GAWTC 2 cut(s) 683, 734
Tru1I TTAA 1 cut(s) 810
Tru9I TTAA 1 cut(s) 810
TscAI CASTG 2 cut(s) 175, 896
TseFI GTSAC 1 cut(s) 442
TseI GCWGC 5 cut(s) 487, 524, 649, 689, 748
Tsp45I GTSAC 1 cut(s) 442
TspGWI ACGGA 3 cut(s) 114, 235, 721
TspRI CASTG 2 cut(s) 175, 896
Tth111I GACNNNGTC 1 cut(s) 254
VpaK11BI GGWCC 2 cut(s) 243, 696
XapI RAATTY 1 cut(s) 43
XcmI CCANNNNNNNNNTGG 1 cut(s) 181
XmiI GTMKAC 1 cut(s) 249
XspI CTAG 1 cut(s) 414
ZraI GACGTC 2 cut(s) 256, 436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.