pycom08g19580
BZIP Family

G-box-binding factor 4-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
19601738 .. 19604203
2466 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g19580.4

Sequence Viewer

Length: 900 bp
ATGATGGCGACGTCTTCGAAAATGGCGGTGGTTTCAACCGCGAATTCGGATCTGCCGCGGAGGGAGTCGTCTATATGTTCACTCTCCACTTTCCTGGCCGACGACGACGACAACCGTCACCACAAGCACCAATCCATGAGCATGGACGACATCCTCAGGAACATCTACAGCTCCACCGGGACTGGCACCGGAAACGACATACACGACAACGGTCACCATCAACAACTTCATCATCCCGCCGAGGCCAGGTCCGTCGACGAGGTCTGGAAGGAGATCGTCGCCGGTGGAGTGGGAGTGGGAGAGGAGGAGGTGGGAGTGGCGGAGGGAGACGGCGGGGATCAGGTGCGGGGAGGAGAAGGAGGAGGTGGTGGTGGGGGTGGGATGGAGGGGATGACCTTGGAGGACTATCTCACTAGGGCTGGGGCCGTGAGGGAAGAGGACGTCAGCTTAAATGCCGGCGGAGTTCCGATTGGGTACGGGCAGTTCCAGGTGCAGCCTCCTCCTCCTCCTCCTCCACCTCCGGCTGCTCAGGGTCAGCTGGTGTACGCGAACGGGACAACAAGCACCAGCGGAGGCGGAGGTGGTGGTGGTGGAGGAGGGAGGGCTGGGAAGAGGAGAGCCGTGCAGGAAGCTCCACTCGATAAGGCAACGCAGCAGAAGCAGAAGAGGATGATCAAGAACAGAGAGTCCGCTGCCCGGTCCAGGGAACGGAAGCAGGCTTACACCGTAGAGCTCGAATCTCTGGTAACGCAGTTGGAGGAGGAAAATGCGCGGCTCCTCAGACAACAGGCTGAGCAAAAGAAGGAGAGTTTTAAGCTGCTCATGGAGAACCTCATTCCTGTTGTAGAGAAGCGGAGGCCACCACGTGTTCTTCGGAGAGTACATTCGGTGCACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

300

Amino Acids

32.07

Weight (kDa)

6.22

Isoelectric Point (pI)

62.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 14, 444
AccB1I GGYRCC 1 cut(s) 185
AccI GTMKAC 1 cut(s) 255
AccII CGCG 4 cut(s) 41, 58, 548, 772
AclWI GGATC 2 cut(s) 57, 345
AcoI YGGCCR 1 cut(s) 96
AcsI RAATTY 1 cut(s) 43
AcvI CACGTG 1 cut(s) 866
AcyI GRCGYC 2 cut(s) 11, 441
AdeI CACNNNGTG 1 cut(s) 866
AfaI GTAC 3 cut(s) 476, 545, 882
AfiI CCNNNNNNNGG 5 cut(s) 246, 696, 702, 703, 708
AflIII ACRYGT 1 cut(s) 865
AgsI TTSAA 1 cut(s) 36
AjnI CCWGG 4 cut(s) 93, 245, 486, 701
AloI GAACNNNNNNTCC 2 cut(s) 671, 703
AluBI AGCT 6 cut(s) 171, 447, 538, 632, 733, 817
AluI AGCT 6 cut(s) 171, 447, 538, 632, 733, 817
Alw21I GWGCWC 2 cut(s) 735, 894
Alw26I GTCTC 1 cut(s) 321
Alw44I GTGCAC 1 cut(s) 890
AlwI GGATC 2 cut(s) 57, 345
AoxI GGCC 4 cut(s) 96, 243, 423, 857
ApaLI GTGCAC 1 cut(s) 890
ApeKI GCWGC 5 cut(s) 493, 524, 652, 692, 817
ApoI RAATTY 1 cut(s) 43
AspLEI GCGC 1 cut(s) 772
AspS9I GGNCC 3 cut(s) 249, 423, 699
AsuC2I CCSGG 2 cut(s) 178, 697
AsuHPI GGTGA 2 cut(s) 110, 206
AsuII TTCGAA 1 cut(s) 17
AvaII GGWCC 2 cut(s) 249, 699
AxyI CCTNAGG 1 cut(s) 155
BaeGI GKGCMC 1 cut(s) 894
BanI GGYRCC 1 cut(s) 185
BanII GRGCYC 1 cut(s) 735
BarI GAAGNNNNNNTAC 2 cut(s) 704, 736
BbrPI CACGTG 1 cut(s) 866
BbsI GAAGAC 1 cut(s) 6
Bbv12I GWGCWC 2 cut(s) 735, 894
BbvI GCAGC 5 cut(s) 505, 511, 664, 679, 804
BccI CCATC 2 cut(s) 225, 376
BceAI ACGGC 3 cut(s) 346, 410, 605
BciT130I CCWGG 4 cut(s) 95, 247, 488, 703
BclI TGATCA 1 cut(s) 672
BcnI CCSGG 2 cut(s) 178, 697
BcoDI GTCTC 1 cut(s) 321
BfaI CTAG 1 cut(s) 414
BfmI CTRYAG 1 cut(s) 166
BisI GCNGC 7 cut(s) 56, 494, 525, 653, 693, 773, 818
BlpI GCTNAGC 1 cut(s) 792
BlsI GCNGC 7 cut(s) 57, 495, 526, 654, 694, 774, 819
Bme1390I CCNGG 6 cut(s) 95, 178, 247, 488, 697, 703
Bme18I GGWCC 2 cut(s) 249, 699
BmgT120I GGNCC 3 cut(s) 249, 423, 699
BmiI GGNNCC 3 cut(s) 187, 424, 776
BmrFI CCNGG 6 cut(s) 95, 178, 247, 488, 697, 703
BoxI GACNNNNGTC 2 cut(s) 114, 210
BpiI GAAGAC 1 cut(s) 6
Bpu10I CCTNAGC 1 cut(s) 528
Bpu1102I GCTNAGC 1 cut(s) 792
Bpu14I TTCGAA 1 cut(s) 17
BpuMI CCSGG 2 cut(s) 178, 697
BsaAI YACGTR 1 cut(s) 866
BsaHI GRCGYC 2 cut(s) 11, 441
BsaJI CCNNGG 4 cut(s) 56, 240, 396, 702
BsaWI WCCGGW 1 cut(s) 188
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bsc4I CCNNNNNNNGG 5 cut(s) 246, 696, 702, 703, 708
Bse118I RCCGGY 2 cut(s) 281, 455
Bse1I ACTGG 2 cut(s) 187, 899
Bse21I CCTNAGG 1 cut(s) 155
BseBI CCWGG 4 cut(s) 95, 247, 488, 703
BseDI CCNNGG 4 cut(s) 56, 240, 396, 702
BseGI GGATG 5 cut(s) 150, 232, 387, 396, 675
BseLI CCNNNNNNNGG 5 cut(s) 246, 696, 702, 703, 708
BseMII CTCAG 4 cut(s) 169, 542, 783, 793
BseNI ACTGG 2 cut(s) 187, 899
BseSI GKGCMC 1 cut(s) 894
BseXI GCAGC 5 cut(s) 505, 511, 664, 679, 804
BseYI CCCAGC 2 cut(s) 419, 605
BsgI GTGCAG 2 cut(s) 512, 644
Bsh1236I CGCG 4 cut(s) 41, 58, 548, 772
BshFI GGCC 4 cut(s) 98, 245, 425, 859
BshNI GGYRCC 1 cut(s) 185
BsiHKAI GWGCWC 2 cut(s) 735, 894
BsiSI CCGG 6 cut(s) 177, 189, 282, 456, 521, 697
BslFI GGGAC 2 cut(s) 193, 568
BslI CCNNNNNNNGG 5 cut(s) 246, 696, 702, 703, 708
BsmAI GTCTC 1 cut(s) 321
BsmBI CGTCTC 1 cut(s) 321
BsmFI GGGAC 2 cut(s) 193, 568
BsnI GGCC 4 cut(s) 98, 245, 425, 859
Bsp119I TTCGAA 1 cut(s) 17
Bsp1286I GDGCHC 2 cut(s) 735, 894
Bsp143I GATC 4 cut(s) 49, 273, 337, 672
Bsp1720I GCTNAGC 1 cut(s) 792
BspANI GGCC 4 cut(s) 98, 245, 425, 859
BspCNI CTCAG 4 cut(s) 168, 541, 784, 792
BspFNI CGCG 4 cut(s) 41, 58, 548, 772
BspLI GGNNCC 3 cut(s) 187, 424, 776
BspPI GGATC 2 cut(s) 57, 345
BspT104I TTCGAA 1 cut(s) 17
BspT107I GGYRCC 1 cut(s) 185
BsrFI RCCGGY 2 cut(s) 281, 455
BsrI ACTGG 2 cut(s) 187, 899
BssAI RCCGGY 2 cut(s) 281, 455
BssECI CCNNGG 4 cut(s) 56, 240, 396, 702
BssMI GATC 4 cut(s) 49, 273, 337, 672
BssNI GRCGYC 2 cut(s) 11, 441
BssT1I CCWWGG 1 cut(s) 396
Bst2UI CCWGG 4 cut(s) 95, 247, 488, 703
Bst4CI ACNGT 3 cut(s) 116, 212, 727
Bst6I CTCTTC 3 cut(s) 429, 605, 659
BstACI GRCGYC 2 cut(s) 11, 441
BstBAI YACGTR 1 cut(s) 866
BstBI TTCGAA 1 cut(s) 17
BstC8I GCNNGC 2 cut(s) 457, 717
BstDEI CTNAG 4 cut(s) 155, 528, 779, 792
BstDSI CCRYGG 1 cut(s) 56
BstEII GGTNACC 1 cut(s) 212
BstF5I GGATG 5 cut(s) 150, 232, 387, 396, 675
BstFNI CGCG 4 cut(s) 41, 58, 548, 772
BstHHI GCGC 1 cut(s) 772
BstKTI GATC 4 cut(s) 52, 276, 340, 675
BstMAI GTCTC 1 cut(s) 321
BstMBI GATC 4 cut(s) 49, 273, 337, 672
BstMWI GCNNNNNNNGC 1 cut(s) 658
BstNI CCWGG 4 cut(s) 95, 247, 488, 703
BstPAI GACNNNNGTC 2 cut(s) 114, 210
BstPI GGTNACC 1 cut(s) 212
BstSCI CCNGG 6 cut(s) 93, 176, 245, 486, 695, 701
BstSFI CTRYAG 1 cut(s) 166
BstSLI GKGCMC 1 cut(s) 894
BstUI CGCG 4 cut(s) 41, 58, 548, 772
BstV1I GCAGC 5 cut(s) 505, 511, 664, 679, 804
BstV2I GAAGAC 1 cut(s) 6
BstX2I RGATCY 1 cut(s) 49
BstXI CCANNNNNNTGG 2 cut(s) 94, 142
BstYI RGATCY 1 cut(s) 49
Bsu36I CCTNAGG 1 cut(s) 155
BsuRI GGCC 4 cut(s) 98, 245, 425, 859
BtgI CCRYGG 1 cut(s) 56
BtsCI GGATG 5 cut(s) 150, 232, 387, 396, 675
BtsIMutI CAGTG 1 cut(s) 892
Cac8I GCNNGC 2 cut(s) 457, 717
CfoI GCGC 1 cut(s) 772
Cfr10I RCCGGY 2 cut(s) 281, 455
Cfr13I GGNCC 3 cut(s) 249, 423, 699
Cfr42I CCGCGG 1 cut(s) 59
Csp6I GTAC 3 cut(s) 475, 544, 881
CviAII CATG 3 cut(s) 136, 142, 823
CviQI GTAC 3 cut(s) 475, 544, 881
DdeI CTNAG 4 cut(s) 155, 528, 779, 792
DpnI GATC 4 cut(s) 51, 275, 339, 674
DpnII GATC 4 cut(s) 49, 273, 337, 672
DraIII CACNNNGTG 1 cut(s) 866
EaeI YGGCCR 1 cut(s) 96
Eam1104I CTCTTC 3 cut(s) 429, 605, 659
EarI CTCTTC 3 cut(s) 429, 605, 659
EciI GGCGGA 3 cut(s) 335, 474, 591
Ecl136II GAGCTC 1 cut(s) 733
Eco130I CCWWGG 1 cut(s) 396
Eco24I GRGCYC 1 cut(s) 735
Eco47I GGWCC 2 cut(s) 249, 699
Eco53kI GAGCTC 1 cut(s) 733
Eco72I CACGTG 1 cut(s) 866
Eco81I CCTNAGG 1 cut(s) 155
Eco91I GGTNACC 1 cut(s) 212
EcoICRI GAGCTC 1 cut(s) 733
EcoO65I GGTNACC 1 cut(s) 212
EcoRI GAATTC 1 cut(s) 43
EcoRII CCWGG 4 cut(s) 93, 245, 486, 701
EcoT14I CCWWGG 1 cut(s) 396
EcoT38I GRGCYC 1 cut(s) 735
ErhI CCWWGG 1 cut(s) 396
Esp3I CGTCTC 1 cut(s) 321
FaeI CATG 3 cut(s) 139, 145, 826
FaiI YATR 6 cut(s) 74, 76, 137, 143, 200, 824
FaqI GGGAC 2 cut(s) 193, 568
FatI CATG 3 cut(s) 135, 141, 822
FauI CCCGC 3 cut(s) 244, 326, 339
FbaI TGATCA 1 cut(s) 672
FblI GTMKAC 1 cut(s) 255
Fnu4HI GCNGC 7 cut(s) 56, 494, 525, 653, 693, 773, 818
FokI GGATG 5 cut(s) 137, 219, 394, 403, 682
FriOI GRGCYC 1 cut(s) 735
Fsp4HI GCNGC 7 cut(s) 56, 494, 525, 653, 693, 773, 818
FspBI CTAG 1 cut(s) 414
GlaI GCGC 1 cut(s) 771
GluI GCNGC 7 cut(s) 56, 494, 525, 653, 693, 773, 818
GsaI CCCAGC 2 cut(s) 423, 609
HaeIII GGCC 4 cut(s) 98, 245, 425, 859
HapII CCGG 6 cut(s) 177, 189, 282, 456, 521, 697
HhaI GCGC 1 cut(s) 772
Hin1I GRCGYC 2 cut(s) 11, 441
Hin1II CATG 3 cut(s) 139, 145, 826
Hin6I GCGC 1 cut(s) 770
HinP1I GCGC 1 cut(s) 770
HincII GTYRAC 1 cut(s) 256
HindII GTYRAC 1 cut(s) 256
HinfI GANTC 3 cut(s) 65, 686, 737
HpaII CCGG 6 cut(s) 177, 189, 282, 456, 521, 697
HphI GGTGA 2 cut(s) 110, 206
Hpy166II GTNNAC 4 cut(s) 80, 256, 544, 892
Hpy188I TCNGA 4 cut(s) 49, 468, 782, 876
Hpy188III TCNNGA 3 cut(s) 157, 265, 676
Hpy8I GTNNAC 4 cut(s) 80, 256, 544, 892
Hpy99I CGWCG 7 cut(s) 13, 104, 107, 110, 257, 260, 281
HpyAV CCTTC 3 cut(s) 262, 350, 796
HpyCH4III ACNGT 3 cut(s) 116, 212, 727
HpyCH4IV ACGT 3 cut(s) 11, 441, 865
HpyCH4V TGCA 3 cut(s) 493, 625, 892
HpyF10VI GCNNNNNNNGC 1 cut(s) 658
HpyF3I CTNAG 4 cut(s) 155, 528, 779, 792
HpySE526I ACGT 3 cut(s) 11, 441, 865
Hsp92I GRCGYC 2 cut(s) 11, 441
Hsp92II CATG 3 cut(s) 139, 145, 826
HspAI GCGC 1 cut(s) 770
KroI GCCGGC 1 cut(s) 455
KroNI GCCGGC 1 cut(s) 457
Ksp22I TGATCA 1 cut(s) 672
KspI CCGCGG 1 cut(s) 59
Kzo9I GATC 4 cut(s) 49, 273, 337, 672
LmnI GCTCC 3 cut(s) 176, 637, 780
Lsp1109I GCAGC 5 cut(s) 505, 511, 664, 679, 804
MaeI CTAG 1 cut(s) 414
MaeII ACGT 3 cut(s) 11, 441, 865
MaeIII GTNAC 3 cut(s) 116, 212, 745
MalI GATC 4 cut(s) 51, 275, 339, 674
MboI GATC 4 cut(s) 49, 273, 337, 672
MboII GAAGA 5 cut(s) 6, 446, 622, 676, 863
MflI RGATCY 1 cut(s) 49
MhlI GDGCHC 2 cut(s) 735, 894
MluCI AATT 1 cut(s) 43
MlyI GAGTC 2 cut(s) 74, 695
MmeI TCCRAC 1 cut(s) 735
MroNI GCCGGC 1 cut(s) 455
MseI TTAA 2 cut(s) 449, 813
MslI CAYNNNNRTG 1 cut(s) 140
MspA1I CMGCKG 4 cut(s) 58, 538, 570, 692
MspI CCGG 6 cut(s) 177, 189, 282, 456, 521, 697
MspR9I CCNGG 6 cut(s) 95, 178, 247, 488, 697, 703
MvaI CCWGG 4 cut(s) 95, 247, 488, 703
MvnI CGCG 4 cut(s) 41, 58, 548, 772
MwoI GCNNNNNNNGC 1 cut(s) 658
NaeI GCCGGC 1 cut(s) 457
NciI CCSGG 2 cut(s) 178, 697
NdeII GATC 4 cut(s) 49, 273, 337, 672
NgoMIV GCCGGC 1 cut(s) 455
NlaIII CATG 3 cut(s) 139, 145, 826
NlaIV GGNNCC 3 cut(s) 187, 424, 776
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 2 cut(s) 116, 212
NspV TTCGAA 1 cut(s) 17
PcsI WCGNNNNNNNCGW 1 cut(s) 201
PdiI GCCGGC 1 cut(s) 457
PfeI GAWTC 1 cut(s) 737
PflFI GACNNNGTC 1 cut(s) 260
PkrI GCNGC 7 cut(s) 57, 495, 526, 654, 694, 774, 819
PleI GAGTC 2 cut(s) 73, 694
PmaCI CACGTG 1 cut(s) 866
PmlI CACGTG 1 cut(s) 866
PpsI GAGTC 2 cut(s) 73, 694
Ppu21I YACGTR 1 cut(s) 866
PshAI GACNNNNGTC 2 cut(s) 114, 210
Psp124BI GAGCTC 1 cut(s) 735
Psp6I CCWGG 4 cut(s) 93, 245, 486, 701
PspCI CACGTG 1 cut(s) 866
PspEI GGTNACC 1 cut(s) 212
PspFI CCCAGC 2 cut(s) 419, 605
PspGI CCWGG 4 cut(s) 93, 245, 486, 701
PspN4I GGNNCC 3 cut(s) 187, 424, 776
PspPI GGNCC 3 cut(s) 249, 423, 699
PsrI GAACNNNNNNTAC 2 cut(s) 467, 499
PsuI RGATCY 1 cut(s) 49
PsyI GACNNNGTC 1 cut(s) 260
PvuII CAGCTG 1 cut(s) 538
RsaI GTAC 3 cut(s) 476, 545, 882
RsaNI GTAC 3 cut(s) 475, 544, 881
RseI CAYNNNNRTG 1 cut(s) 140
SacI GAGCTC 1 cut(s) 735
SacII CCGCGG 1 cut(s) 59
SalI GTCGAC 1 cut(s) 254
SaqAI TTAA 2 cut(s) 449, 813
SatI GCNGC 7 cut(s) 56, 494, 525, 653, 693, 773, 818
Sau3AI GATC 4 cut(s) 49, 273, 337, 672
Sau96I GGNCC 3 cut(s) 249, 423, 699
SchI GAGTC 2 cut(s) 74, 695
ScrFI CCNGG 6 cut(s) 95, 178, 247, 488, 697, 703
SduI GDGCHC 2 cut(s) 735, 894
SfcI CTRYAG 1 cut(s) 166
Sfr303I CCGCGG 1 cut(s) 59
SfuI TTCGAA 1 cut(s) 17
SgrAI CRCCGGYG 1 cut(s) 281
SgrBI CCGCGG 1 cut(s) 59
SgrDI CGTCGACG 1 cut(s) 254
SinI GGWCC 2 cut(s) 249, 699
SmiMI CAYNNNNRTG 1 cut(s) 140
Sse9I AATT 1 cut(s) 43
SspMI CTAG 1 cut(s) 414
SstI GAGCTC 1 cut(s) 735
StyD4I CCNGG 6 cut(s) 93, 176, 245, 486, 695, 701
StyI CCWWGG 1 cut(s) 396
TaaI ACNGT 3 cut(s) 116, 212, 727
TaiI ACGT 3 cut(s) 14, 444, 868
TaqI TCGA 4 cut(s) 17, 255, 639, 735
TasI AATT 1 cut(s) 43
TatI WGTACW 1 cut(s) 880
TauI GCSGC 2 cut(s) 58, 775
TfiI GAWTC 1 cut(s) 737
Tru1I TTAA 2 cut(s) 449, 813
Tru9I TTAA 2 cut(s) 449, 813
TscAI CASTG 1 cut(s) 899
TseFI GTSAC 2 cut(s) 116, 212
TseI GCWGC 5 cut(s) 493, 524, 652, 692, 817
Tsp45I GTSAC 2 cut(s) 116, 212
TspDTI ATGAA 1 cut(s) 218
TspGWI ACGGA 2 cut(s) 241, 724
TspRI CASTG 1 cut(s) 899
Tth111I GACNNNGTC 1 cut(s) 260
VneI GTGCAC 1 cut(s) 890
VpaK11BI GGWCC 2 cut(s) 249, 699
XapI RAATTY 1 cut(s) 43
XmiI GTMKAC 1 cut(s) 255
XspI CTAG 1 cut(s) 414
ZraI GACGTC 2 cut(s) 12, 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.