Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001805

Physical Location & Seq

Genomic Coordinates Reverse (-)

2973122 .. 2979459

Gene Structure 6338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G031500.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 948 bp

ATGGCGTCGTCAAAACTAGTGTCGTCGTCGTCAAGATCACGAAACTCGGATCTCTCGCGACGCCCTTCTTCCAATTCCCCCGCTACAAAACCCAAACCCTCAGCAACCCCATCTTCCTCCTCCGCTCACCCCCAAACCCTGAACAACCACAGCAACGGCATCAGTGATTATCACAGCACCAATACGACGTCGTCCATGCCAATCGGCTCGATGACCATCGACGGCCTCCTCTATGACCCGAACCCCACCCCCATGACCGACGCCACCCTCCTCGACGCCCAAATAACCCTAATCAACACTGACGCCGCCGCAGAAATGAACAGCTCCTCGGCGGCGGTGCCGCAGAAGACCGTCGACGAGGTCTGGAGGGAAATTGTGTCCGGCGAGGCTCGGAAGGGGTGTAAAGAGGAGGTTCCGGATGATTTGATGACTCTGGAGGACTTTTTGGCTCGGGCCGGGGCGGTGGAGGAGGACGACATTAAGGATATGCCGCTTGCGATGCCGCCTCCGGAGACGGAGAGATTGAGCGGCGGTGTATTTTCGTTTGATCCGATGCCGCAGCTCAGCCCGTTCAGTTCGATTGATAAGGTTGAAGGGTCGATAATTGGGTTTGGGAATGGGGTTGAGATGGTTGGGAGTGGAGGAGTGGGAAGAGGGAAGAGAGGGCGCGCCGTTTTGGAGCCTATGGATAAGGTGGCGCAGCAGAGACAGCGGAGGATGATCAAGAACCGTGAGTCAGCGGCCAGGTCCCGAGAGAGGAAGCAGGCTTACCAAGTGGAGTTGGAATCATTGGCGGTCAGATTAGAGGAGGAGAACGAGCAGCTTTTGAAAGAGAAGACTGAGAGGACTGAGGAAAGACGTAAGCAGCTAATGGAAAAAGTCATTCCGGTTGTGGAGAAGCGAAGACCAGCCCGTGCCCTCCGGAGAGTTCACTCGTTGCAGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009787 GO:0009789 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0047484 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1901000 GO:1901002 GO:1901363 GO:1901419 GO:1901421 GO:1902584 GO:1902680 GO:1903506 GO:1903508 GO:1905957 GO:1905959 GO:2000070 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

316

Amino Acids

34.69

Weight (kDa)

6.5

Isoelectric Point (pI)

60.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001805)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03970 AT5G44080
fragaria_vesca	FvH4_2g13640 FvH4_2g13640 FvH4_2g13640 FvH4_5g30210 FvH4_5g30210 FvH4_5g30210
malus_domestica	MD05G1027000.v1.1 MD08G1224700.v1.1 MD10G1026300.v1.1 MD15G1417900.v1.1
prunus_persica	Prupe.1G562000_v2.0.a1 Prupe.8G031500_v2.0.a1 Prupe.8G031500_v2.0.a1 Prupe.8G031500_v2.0.a1 Prupe.8G031500_v2.0.a1 Prupe.8G031500_v2.0.a1
pyrus_communis	pycom05g01880 pycom08g19580 pycom10g01780 pycom13g04250
rosa_chinensis	RchiOBHm_Chr6g0275281 RchiOBHm_Chr7g0224461
rosa_laevigata	RLG00000001893 RLG00000013476
rosa_multiflora	Rmu_sc0003894.1_g000002 Rmu_sc0022303.1_g000003
rosa_roxburghii	Rroxscaffold_3G00234720 Rroxscaffold_7G00193440
rosa_rugosa	Rorug06G0090600 Rorug06G0090600 Rorug06G0090700 Rorug06G0090800 Rorug07G0223400 Rorug07G0223500 Rorug07G0223600
rosa_samantha	Rh6AG204300 Rh6BG207200 Rh6CG209700 Rh6DG200100 Rh7AG379800 Rh7BG359700 Rh7CG399300 Rh7DG369200
rosa_wichuraiana	Rw6G017740 Rw7G031190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	191
AccB1I	GGYRCC	1 cut(s)	337
AccBSI	CCGCTC	2 cut(s)	125, 528
AccI	GTMKAC	1 cut(s)	354
AccII	CGCG	2 cut(s)	58, 669
AccIII	TCCGGA	3 cut(s)	415, 508, 921
AclWI	GGATC	2 cut(s)	57, 542
AcoI	YGGCCR	1 cut(s)	741
AcyI	GRCGYC	6 cut(s)	5, 61, 188, 261, 276, 303
AfiI	CCNNNNNNNGG	1 cut(s)	756
AgsI	TTSAA	2 cut(s)	593, 829
AhlI	ACTAGT	1 cut(s)	16
AjnI	CCWGG	1 cut(s)	743
AluBI	AGCT	4 cut(s)	324, 562, 823, 868
AluI	AGCT	4 cut(s)	324, 562, 823, 868
Alw26I	GTCTC	2 cut(s)	506, 700
AlwI	GGATC	2 cut(s)	57, 542
Ama87I	CYCGRG	2 cut(s)	450, 750
Aor13HI	TCCGGA	3 cut(s)	415, 508, 921
AoxI	GGCC	3 cut(s)	223, 453, 741
ApeKI	GCWGC	4 cut(s)	559, 700, 820, 865
ArsI	GACNNNNNNTTYG	1 cut(s)	37
AscI	GGCGCGCC	1 cut(s)	667
AspLEI	GCGC	3 cut(s)	669, 671, 700
AspS9I	GGNCC	2 cut(s)	453, 747
AsuC2I	CCSGG	1 cut(s)	457
AsuHPI	GGTGA	1 cut(s)	119
AvaI	CYCGRG	2 cut(s)	450, 750
AvaII	GGWCC	1 cut(s)	747
BaeGI	GKGCMC	1 cut(s)	919
BanI	GGYRCC	1 cut(s)	337
BarI	GAAGNNNNNNTAC	2 cut(s)	752, 784
BbsI	GAAGAC	3 cut(s)	353, 842, 910
BbvCI	CCTCAGC	1 cut(s)	100
BbvI	GCAGC	4 cut(s)	571, 712, 832, 877
BccI	CCATC	3 cut(s)	118, 224, 622
BceAI	ACGGC	3 cut(s)	172, 238, 656
BciT130I	CCWGG	1 cut(s)	745
BclI	TGATCA	1 cut(s)	720
BcnI	CCSGG	1 cut(s)	457
BcoDI	GTCTC	2 cut(s)	506, 700
BcuI	ACTAGT	1 cut(s)	16
BfaI	CTAG	1 cut(s)	17
BlpI	GCTNAGC	1 cut(s)	563
Bme1390I	CCNGG	2 cut(s)	457, 745
Bme18I	GGWCC	1 cut(s)	747
BmeT110I	CYCGRG	2 cut(s)	450, 750
BmgT120I	GGNCC	2 cut(s)	453, 747
BmiI	GGNNCC	4 cut(s)	339, 414, 681, 749
BmrFI	CCNGG	2 cut(s)	457, 745
BmsI	GCATC	3 cut(s)	168, 489, 543
BpiI	GAAGAC	3 cut(s)	353, 842, 910
BpmI	CTGGAG	2 cut(s)	385, 455
Bpu10I	CCTNAGC	1 cut(s)	100
Bpu1102I	GCTNAGC	1 cut(s)	563
BpuMI	CCSGG	1 cut(s)	457
BsaBI	GATNNNNATC	1 cut(s)	215
BsaHI	GRCGYC	6 cut(s)	5, 61, 188, 261, 276, 303
BsaJI	CCNNGG	2 cut(s)	327, 456
BsaWI	WCCGGW	4 cut(s)	415, 508, 886, 921
Bsc4I	CCNNNNNNNGG	1 cut(s)	756
Bse8I	GATNNNNATC	1 cut(s)	215
BseAI	TCCGGA	3 cut(s)	415, 508, 921
BseBI	CCWGG	1 cut(s)	745
BseDI	CCNNGG	2 cut(s)	327, 456
BseGI	GGATG	2 cut(s)	424, 723
BseJI	GATNNNNATC	1 cut(s)	215
BseLI	CCNNNNNNNGG	1 cut(s)	756
BseMII	CTCAG	4 cut(s)	114, 577, 831, 840
BsePI	GCGCGC	1 cut(s)	667
BseRI	GAGGAG	9 cut(s)	109, 218, 260, 316, 422, 482, 657, 821, 824
BseSI	GKGCMC	1 cut(s)	919
BseXI	GCAGC	4 cut(s)	571, 712, 832, 877
Bsh1236I	CGCG	2 cut(s)	58, 669
BshFI	GGCC	3 cut(s)	225, 455, 743
BshNI	GGYRCC	1 cut(s)	337
BsiHKCI	CYCGRG	2 cut(s)	450, 750
BsiSI	CCGG	6 cut(s)	381, 416, 456, 509, 887, 922
BslFI	GGGAC	1 cut(s)	733
BslI	CCNNNNNNNGG	1 cut(s)	756
BsmAI	GTCTC	2 cut(s)	506, 700
BsmBI	CGTCTC	1 cut(s)	506
BsmFI	GGGAC	1 cut(s)	733
BsnI	GGCC	3 cut(s)	225, 455, 743
BsoBI	CYCGRG	2 cut(s)	450, 750
Bsp1286I	GDGCHC	1 cut(s)	919
Bsp13I	TCCGGA	3 cut(s)	415, 508, 921
Bsp143I	GATC	4 cut(s)	35, 49, 547, 720
Bsp1720I	GCTNAGC	1 cut(s)	563
Bsp68I	TCGCGA	1 cut(s)	58
BspANI	GGCC	3 cut(s)	225, 455, 743
BspCNI	CTCAG	4 cut(s)	113, 576, 832, 841
BspEI	TCCGGA	3 cut(s)	415, 508, 921
BspFNI	CGCG	2 cut(s)	58, 669
BspLI	GGNNCC	4 cut(s)	339, 414, 681, 749
BspPI	GGATC	2 cut(s)	57, 542
BspT107I	GGYRCC	1 cut(s)	337
BsrBI	CCGCTC	2 cut(s)	125, 528
BssECI	CCNNGG	2 cut(s)	327, 456
BssHII	GCGCGC	1 cut(s)	667
BssMI	GATC	4 cut(s)	35, 49, 547, 720
BssNI	GRCGYC	6 cut(s)	5, 61, 188, 261, 276, 303
Bst2UI	CCWGG	1 cut(s)	745
Bst4CI	ACNGT	2 cut(s)	352, 731
Bst6I	CTCTTC	2 cut(s)	646, 653
BstACI	GRCGYC	6 cut(s)	5, 61, 188, 261, 276, 303
BstC8I	GCNNGC	3 cut(s)	495, 669, 765
BstDEI	CTNAG	4 cut(s)	100, 563, 840, 849
BstF5I	GGATG	2 cut(s)	424, 723
BstFNI	CGCG	2 cut(s)	58, 669
BstHHI	GCGC	3 cut(s)	669, 671, 700
BstKTI	GATC	4 cut(s)	38, 52, 550, 723
BstMAI	GTCTC	2 cut(s)	506, 700
BstMBI	GATC	4 cut(s)	35, 49, 547, 720
BstMWI	GCNNNNNNNGC	2 cut(s)	499, 709
BstNI	CCWGG	1 cut(s)	745
BstSCI	CCNGG	2 cut(s)	455, 743
BstSLI	GKGCMC	1 cut(s)	919
BstUI	CGCG	2 cut(s)	58, 669
BstV1I	GCAGC	4 cut(s)	571, 712, 832, 877
BstV2I	GAAGAC	3 cut(s)	353, 842, 910
BstX2I	RGATCY	1 cut(s)	49
BstYI	RGATCY	1 cut(s)	49
BsuRI	GGCC	3 cut(s)	225, 455, 743
BtgZI	GCGATG	1 cut(s)	512
BtsCI	GGATG	2 cut(s)	424, 723
BtsI	GCAGTG	1 cut(s)	947
BtsIMutI	CAGTG	3 cut(s)	169, 297, 947
BtuMI	TCGCGA	1 cut(s)	58
Cac8I	GCNNGC	3 cut(s)	495, 669, 765
CfoI	GCGC	3 cut(s)	669, 671, 700
Cfr13I	GGNCC	2 cut(s)	453, 747
CseI	GACGC	4 cut(s)	69, 269, 284, 311
CviAII	CATG	2 cut(s)	196, 253
DdeI	CTNAG	4 cut(s)	100, 563, 840, 849
DpnI	GATC	4 cut(s)	37, 51, 549, 722
DpnII	GATC	4 cut(s)	35, 49, 547, 720
EaeI	YGGCCR	1 cut(s)	741
Eam1104I	CTCTTC	2 cut(s)	646, 653
EarI	CTCTTC	2 cut(s)	646, 653
Eco47I	GGWCC	1 cut(s)	747
Eco88I	CYCGRG	2 cut(s)	450, 750
EcoO109I	RGGNCCY	1 cut(s)	747
EcoRII	CCWGG	1 cut(s)	743
Esp3I	CGTCTC	1 cut(s)	506
FaeI	CATG	2 cut(s)	199, 256
FaiI	YATR	5 cut(s)	197, 234, 254, 488, 686
FaqI	GGGAC	1 cut(s)	733
FatI	CATG	2 cut(s)	195, 252
FauI	CCCGC	1 cut(s)	88
FbaI	TGATCA	1 cut(s)	720
FblI	GTMKAC	1 cut(s)	354
FokI	GGATG	2 cut(s)	431, 730
FspBI	CTAG	1 cut(s)	17
GlaI	GCGC	3 cut(s)	668, 670, 699
GsuI	CTGGAG	2 cut(s)	385, 455
HaeIII	GGCC	3 cut(s)	225, 455, 743
HapII	CCGG	6 cut(s)	381, 416, 456, 509, 887, 922
HgaI	GACGC	4 cut(s)	69, 269, 284, 311
HhaI	GCGC	3 cut(s)	669, 671, 700
Hin1I	GRCGYC	6 cut(s)	5, 61, 188, 261, 276, 303
Hin1II	CATG	2 cut(s)	199, 256
Hin6I	GCGC	3 cut(s)	667, 669, 698
HinP1I	GCGC	3 cut(s)	667, 669, 698
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HinfI	GANTC	3 cut(s)	430, 734, 785
HpaII	CCGG	6 cut(s)	381, 416, 456, 509, 887, 922
HphI	GGTGA	1 cut(s)	119
Hpy166II	GTNNAC	2 cut(s)	355, 931
Hpy188I	TCNGA	4 cut(s)	49, 393, 552, 800
Hpy8I	GTNNAC	2 cut(s)	355, 931
HpyAV	CCTTC	3 cut(s)	75, 388, 587
HpyCH4III	ACNGT	2 cut(s)	352, 731
HpyCH4IV	ACGT	2 cut(s)	188, 859
HpyCH4V	TGCA	1 cut(s)	940
HpyF10VI	GCNNNNNNNGC	2 cut(s)	499, 709
HpyF3I	CTNAG	4 cut(s)	100, 563, 840, 849
HpySE526I	ACGT	2 cut(s)	188, 859
Hsp92I	GRCGYC	6 cut(s)	5, 61, 188, 261, 276, 303
Hsp92II	CATG	2 cut(s)	199, 256
HspAI	GCGC	3 cut(s)	667, 669, 698
Kpn2I	TCCGGA	3 cut(s)	415, 508, 921
Ksp22I	TGATCA	1 cut(s)	720
Kzo9I	GATC	4 cut(s)	35, 49, 547, 720
LmnI	GCTCC	2 cut(s)	329, 679
Lsp1109I	GCAGC	4 cut(s)	571, 712, 832, 877
LweI	GCATC	3 cut(s)	168, 489, 543
MaeI	CTAG	1 cut(s)	17
MaeII	ACGT	2 cut(s)	188, 859
MalI	GATC	4 cut(s)	37, 51, 549, 722
MbiI	CCGCTC	2 cut(s)	125, 528
MboI	GATC	4 cut(s)	35, 49, 547, 720
MboII	GAAGA	7 cut(s)	60, 105, 358, 663, 670, 847, 915
MflI	RGATCY	1 cut(s)	49
MhlI	GDGCHC	1 cut(s)	919
MluCI	AATT	3 cut(s)	73, 372, 603
MlyI	GAGTC	2 cut(s)	424, 743
MmeI	TCCRAC	1 cut(s)	762
MroI	TCCGGA	3 cut(s)	415, 508, 921
MseI	TTAA	1 cut(s)	480
MslI	CAYNNNNRTG	1 cut(s)	251
MspA1I	CMGCKG	2 cut(s)	712, 740
MspI	CCGG	6 cut(s)	381, 416, 456, 509, 887, 922
MspR9I	CCNGG	2 cut(s)	457, 745
MvaI	CCWGG	1 cut(s)	745
MvnI	CGCG	2 cut(s)	58, 669
MwoI	GCNNNNNNNGC	2 cut(s)	499, 709
NciI	CCSGG	1 cut(s)	457
NdeII	GATC	4 cut(s)	35, 49, 547, 720
NlaIII	CATG	2 cut(s)	199, 256
NlaIV	GGNNCC	4 cut(s)	339, 414, 681, 749
NmeAIII	GCCGAG	1 cut(s)	308
NruI	TCGCGA	1 cut(s)	58
PalAI	GGCGCGCC	1 cut(s)	667
PauI	GCGCGC	1 cut(s)	667
PcsI	WCGNNNNNNNCGW	1 cut(s)	548
PfeI	GAWTC	1 cut(s)	785
PflFI	GACNNNGTC	2 cut(s)	190, 359
PleI	GAGTC	2 cut(s)	424, 742
PpsI	GAGTC	2 cut(s)	424, 742
PpuMI	RGGWCCY	1 cut(s)	747
Psp5II	RGGWCCY	1 cut(s)	747
Psp6I	CCWGG	1 cut(s)	743
PspGI	CCWGG	1 cut(s)	743
PspN4I	GGNNCC	4 cut(s)	339, 414, 681, 749
PspPI	GGNCC	2 cut(s)	453, 747
PspPPI	RGGWCCY	1 cut(s)	747
PsuI	RGATCY	1 cut(s)	49
PsyI	GACNNNGTC	2 cut(s)	190, 359
PteI	GCGCGC	1 cut(s)	667
RruI	TCGCGA	1 cut(s)	58
RseI	CAYNNNNRTG	1 cut(s)	251
SalI	GTCGAC	1 cut(s)	353
SaqAI	TTAA	1 cut(s)	480
Sau3AI	GATC	4 cut(s)	35, 49, 547, 720
Sau96I	GGNCC	2 cut(s)	453, 747
SchI	GAGTC	2 cut(s)	424, 743
ScrFI	CCNGG	2 cut(s)	457, 745
SduI	GDGCHC	1 cut(s)	919
SfaNI	GCATC	3 cut(s)	168, 489, 543
SgrDI	CGTCGACG	1 cut(s)	353
SgsI	GGCGCGCC	1 cut(s)	667
SinI	GGWCC	1 cut(s)	747
SmiMI	CAYNNNNRTG	1 cut(s)	251
SpeI	ACTAGT	1 cut(s)	16
Sse9I	AATT	3 cut(s)	73, 372, 603
SspMI	CTAG	1 cut(s)	17
StyD4I	CCNGG	2 cut(s)	455, 743
TaaI	ACNGT	2 cut(s)	352, 731
TaiI	ACGT	2 cut(s)	191, 862
TaqI	TCGA	6 cut(s)	209, 219, 273, 354, 578, 599
TaqII	GACCGA	1 cut(s)	272
TasI	AATT	3 cut(s)	73, 372, 603
TauI	GCSGC	9 cut(s)	308, 311, 335, 343, 493, 505, 531, 559, 743
TfiI	GAWTC	1 cut(s)	785
Tru1I	TTAA	1 cut(s)	480
Tru9I	TTAA	1 cut(s)	480
TscAI	CASTG	3 cut(s)	169, 304, 947
TseI	GCWGC	4 cut(s)	559, 700, 820, 865
TspDTI	ATGAA	1 cut(s)	332
TspGWI	ACGGA	1 cut(s)	530
TspRI	CASTG	3 cut(s)	169, 304, 947
Tth111I	GACNNNGTC	2 cut(s)	190, 359
VpaK11BI	GGWCC	1 cut(s)	747
XmiI	GTMKAC	1 cut(s)	354
XspI	CTAG	1 cut(s)	17
ZraI	GACGTC	1 cut(s)	189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.