Rh6CG209700
BZIP Family

G-box-binding factor 4-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
34805941 .. 34811321
5381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG209700.1

Sequence Viewer

Length: 954 bp
ATGGCGTCGTCGAAGCTGATCTCGTCGTCGTCAAATTCCCGCAACTCCGATCTCTCCCGACGCCCCTCCTCCAATTCCACAAAACCCAAACCATCCTCCTCCTCCGCCGCCGCCGCCAACCAAACCCTAAACACCACCGCCGGCGGCGGCGGCTACATTCATCCCACGCCGGTCCAGCTCGGCTCGATGGCCGTCGACGGCCTCTTCTACAACAACAGCCTTACCACCTCGGAGCTCGAAGCGCAAATAAACCTGATCGACACCGCCGGCTTGGAAATCAACTCCGCCGCCAGCGTCAGCTCGTCGGCGCCGCCGAGGCCGAGGACGGTCGACGAGGTCTGGCAGGAGATTGTGTCCGGCGTGAGCCGGAAGGAGTGTAAAGAAGAGGTCCCCGATGAGTTGATGACGCTCGAGGACTTTCTGGCTCGGGCCGGCGCGGTGGAAGATAACGACATTAAGGATTTACACCTTGTGCCGCCGCCGCCGCCGCCGCCGGAGACGGAGAGGTTGAGCGGTGGACTGAGCGGAGGGATGTTTGGGTTCGATCAGATCGCACTGAGCCCGTTCCAGTCGATTGAGAAGATTGAAAAGGTTGAGGGATCCATAGTTGGATTCGGAAATGGTGCTGAGGTGGCGGCGAGTGGAGGAGGGAGGGGGAGAGGGAAGAGAGCCAGGGCTGTTTTGGAGCCAATGGATAAGGCTGCACAGCAGAGGCAGAGGAGGATGATCAAGAATCGGGAGTCGGCGGCACGGTCCAGAGAGAGGAAGCAGGCTTACCAAGTTGAATTGGAGTTGATGGCGGTTAGATTAGAGGAAGAGAACGAGCGGCTTTTGAAAGAGAAGGCTGAGAGGACCGAGGAAAGACTTAAGCAGCTCATGGAAAATATTATTCCTGTTGTGGAGAAGAGAAGACCATCACGTGTCCTCCGCAGAGTTCGCTCACTGCAATGGTAG

Protein Analysis

317

Amino Acids

34.65

Weight (kDa)

8.6

Isoelectric Point (pI)

62.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 235 - 292 1.4e-10 bZIP transcription factor
bZIP_2 PF07716 235 - 283 5.8e-07 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 307
AccBSI CCGCTC 3 cut(s) 513, 525, 826
AccI GTMKAC 2 cut(s) 195, 330
AccII CGCG 1 cut(s) 437
AclWI GGATC 2 cut(s) 594, 607
AcoI YGGCCR 1 cut(s) 189
AcsI RAATTY 1 cut(s) 34
AcvI CACGTG 1 cut(s) 920
AcyI GRCGYC 3 cut(s) 5, 61, 308
AdeI CACNNNGTG 1 cut(s) 472
AfiI CCNNNNNNNGG 1 cut(s) 762
AflII CTTAAG 1 cut(s) 866
AflIII ACRYGT 1 cut(s) 919
AgsI TTSAA 3 cut(s) 587, 785, 835
AjnI CCWGG 1 cut(s) 671
AluBI AGCT 5 cut(s) 16, 178, 235, 300, 874
AluI AGCT 5 cut(s) 16, 178, 235, 300, 874
Alw21I GWGCWC 1 cut(s) 237
Alw26I GTCTC 1 cut(s) 491
AlwI GGATC 2 cut(s) 594, 607
Ama87I CYCGRG 2 cut(s) 410, 426
AoxI GGCC 4 cut(s) 189, 199, 317, 429
ApeKI GCWGC 2 cut(s) 701, 871
ApoI RAATTY 1 cut(s) 34
AspLEI GCGC 3 cut(s) 244, 310, 437
AspS9I GGNCC 5 cut(s) 172, 388, 429, 753, 852
AvaI CYCGRG 2 cut(s) 410, 426
AvaII GGWCC 4 cut(s) 172, 388, 753, 852
BamHI GGATCC 1 cut(s) 599
BanI GGYRCC 1 cut(s) 307
BanII GRGCYC 2 cut(s) 237, 563
BarI GAAGNNNNNNTAC 2 cut(s) 758, 790
BbrPI CACGTG 1 cut(s) 920
BbsI GAAGAC 1 cut(s) 916
Bbv12I GWGCWC 1 cut(s) 237
BbvCI CCTCAGC 1 cut(s) 627
BbvI GCAGC 2 cut(s) 688, 883
BccI CCATC 4 cut(s) 100, 181, 790, 922
BceAI ACGGC 2 cut(s) 176, 214
BciT130I CCWGG 1 cut(s) 673
BclI TGATCA 1 cut(s) 726
BcoDI GTCTC 1 cut(s) 491
BfoI RGCGCY 1 cut(s) 311
BfrI CTTAAG 1 cut(s) 866
BglI GCCNNNNNGGC 1 cut(s) 316
Bme1390I CCNGG 1 cut(s) 673
Bme18I GGWCC 4 cut(s) 172, 388, 753, 852
BmeT110I CYCGRG 2 cut(s) 410, 426
BmgT120I GGNCC 5 cut(s) 172, 388, 429, 753, 852
BmiI GGNNCC 4 cut(s) 309, 390, 601, 687
BmrFI CCNGG 1 cut(s) 673
BpiI GAAGAC 1 cut(s) 916
Bpu10I CCTNAGC 1 cut(s) 627
BsaAI YACGTR 1 cut(s) 920
BsaHI GRCGYC 3 cut(s) 5, 61, 308
BsaJI CCNNGG 5 cut(s) 228, 314, 320, 672, 855
BsaXI ACNNNNNCTCC 4 cut(s) 338, 368, 909, 939
Bsc4I CCNNNNNNNGG 1 cut(s) 762
Bse118I RCCGGY 4 cut(s) 140, 169, 266, 431
Bse1I ACTGG 1 cut(s) 568
Bse3DI GCAATG 1 cut(s) 953
BseBI CCWGG 1 cut(s) 673
BseDI CCNNGG 5 cut(s) 228, 314, 320, 672, 855
BseGI GGATG 4 cut(s) 92, 160, 537, 729
BseLI CCNNNNNNNGG 1 cut(s) 762
BseMI GCAATG 1 cut(s) 953
BseMII CTCAG 4 cut(s) 512, 548, 618, 837
BseNI ACTGG 1 cut(s) 568
BseRI GAGGAG 5 cut(s) 58, 88, 91, 660, 733
BseXI GCAGC 2 cut(s) 688, 883
BsgI GTGCAG 1 cut(s) 687
Bsh1236I CGCG 1 cut(s) 437
Bsh1285I CGRYCG 1 cut(s) 330
BshFI GGCC 4 cut(s) 191, 201, 319, 431
BshNI GGYRCC 1 cut(s) 307
BsiEI CGRYCG 1 cut(s) 330
BsiHKAI GWGCWC 1 cut(s) 237
BsiHKCI CYCGRG 2 cut(s) 410, 426
BsiSI CCGG 7 cut(s) 141, 170, 267, 357, 367, 432, 494
BslFI GGGAC 1 cut(s) 374
BslI CCNNNNNNNGG 1 cut(s) 762
BsmAI GTCTC 1 cut(s) 491
BsmBI CGTCTC 1 cut(s) 491
BsmFI GGGAC 1 cut(s) 374
BsnI GGCC 4 cut(s) 191, 201, 319, 431
BsoBI CYCGRG 2 cut(s) 410, 426
Bsp1286I GDGCHC 2 cut(s) 237, 563
Bsp143I GATC 7 cut(s) 18, 49, 255, 544, 549, 599, 726
BspANI GGCC 4 cut(s) 191, 201, 319, 431
BspCNI CTCAG 4 cut(s) 513, 549, 619, 838
BspFNI CGCG 1 cut(s) 437
BspLI GGNNCC 4 cut(s) 309, 390, 601, 687
BspPI GGATC 2 cut(s) 594, 607
BspT107I GGYRCC 1 cut(s) 307
BspTI CTTAAG 1 cut(s) 866
BsrBI CCGCTC 3 cut(s) 513, 525, 826
BsrDI GCAATG 1 cut(s) 953
BsrFI RCCGGY 4 cut(s) 140, 169, 266, 431
BsrI ACTGG 1 cut(s) 568
BssAI RCCGGY 4 cut(s) 140, 169, 266, 431
BssECI CCNNGG 5 cut(s) 228, 314, 320, 672, 855
BssMI GATC 7 cut(s) 18, 49, 255, 544, 549, 599, 726
BssNI GRCGYC 3 cut(s) 5, 61, 308
Bst2UI CCWGG 1 cut(s) 673
Bst4CI ACNGT 2 cut(s) 328, 753
Bst6I CTCTTC 5 cut(s) 209, 378, 659, 810, 899
BstACI GRCGYC 3 cut(s) 5, 61, 308
BstAFI CTTAAG 1 cut(s) 866
BstBAI YACGTR 1 cut(s) 920
BstC8I GCNNGC 5 cut(s) 142, 268, 292, 433, 771
BstDEI CTNAG 4 cut(s) 521, 557, 627, 846
BstF5I GGATG 4 cut(s) 92, 160, 537, 729
BstFNI CGCG 1 cut(s) 437
BstH2I RGCGCY 1 cut(s) 311
BstHHI GCGC 3 cut(s) 244, 310, 437
BstKTI GATC 7 cut(s) 21, 52, 258, 547, 552, 602, 729
BstMAI GTCTC 1 cut(s) 491
BstMBI GATC 7 cut(s) 18, 49, 255, 544, 549, 599, 726
BstMCI CGRYCG 1 cut(s) 330
BstNI CCWGG 1 cut(s) 673
BstSCI CCNGG 1 cut(s) 671
BstUI CGCG 1 cut(s) 437
BstV1I GCAGC 2 cut(s) 688, 883
BstV2I GAAGAC 1 cut(s) 916
BstX2I RGATCY 1 cut(s) 599
BstYI RGATCY 1 cut(s) 599
BsuRI GGCC 4 cut(s) 191, 201, 319, 431
BtsCI GGATG 4 cut(s) 92, 160, 537, 729
BtsI GCAGTG 1 cut(s) 941
BtsIMutI CAGTG 2 cut(s) 554, 941
Cac8I GCNNGC 5 cut(s) 142, 268, 292, 433, 771
CfoI GCGC 3 cut(s) 244, 310, 437
Cfr10I RCCGGY 4 cut(s) 140, 169, 266, 431
Cfr13I GGNCC 5 cut(s) 172, 388, 429, 753, 852
CseI GACGC 3 cut(s) 69, 283, 415
CviAII CATG 1 cut(s) 877
DdeI CTNAG 4 cut(s) 521, 557, 627, 846
DinI GGCGCC 1 cut(s) 309
DpnI GATC 7 cut(s) 20, 51, 257, 546, 551, 601, 728
DpnII GATC 7 cut(s) 18, 49, 255, 544, 549, 599, 726
DraIII CACNNNGTG 1 cut(s) 472
EaeI YGGCCR 1 cut(s) 189
Eam1104I CTCTTC 5 cut(s) 209, 378, 659, 810, 899
EarI CTCTTC 5 cut(s) 209, 378, 659, 810, 899
EciI GGCGGA 2 cut(s) 94, 274
Ecl136II GAGCTC 1 cut(s) 235
Eco24I GRGCYC 2 cut(s) 237, 563
Eco47I GGWCC 4 cut(s) 172, 388, 753, 852
Eco53kI GAGCTC 1 cut(s) 235
Eco72I CACGTG 1 cut(s) 920
Eco88I CYCGRG 2 cut(s) 410, 426
EcoICRI GAGCTC 1 cut(s) 235
EcoO109I RGGNCCY 1 cut(s) 388
EcoRII CCWGG 1 cut(s) 671
EcoT38I GRGCYC 2 cut(s) 237, 563
EgeI GGCGCC 1 cut(s) 309
EheI GGCGCC 1 cut(s) 309
Esp3I CGTCTC 1 cut(s) 491
FaeI CATG 1 cut(s) 880
FaiI YATR 2 cut(s) 605, 878
FaqI GGGAC 1 cut(s) 374
FatI CATG 1 cut(s) 876
FauI CCCGC 1 cut(s) 47
FbaI TGATCA 1 cut(s) 726
FblI GTMKAC 2 cut(s) 195, 330
FokI GGATG 4 cut(s) 79, 147, 544, 736
FriOI GRGCYC 2 cut(s) 237, 563
GlaI GCGC 3 cut(s) 243, 309, 436
HaeII RGCGCY 1 cut(s) 311
HaeIII GGCC 4 cut(s) 191, 201, 319, 431
HapII CCGG 7 cut(s) 141, 170, 267, 357, 367, 432, 494
HgaI GACGC 3 cut(s) 69, 283, 415
HhaI GCGC 3 cut(s) 244, 310, 437
Hin1I GRCGYC 3 cut(s) 5, 61, 308
Hin1II CATG 1 cut(s) 880
Hin6I GCGC 3 cut(s) 242, 308, 435
HinP1I GCGC 3 cut(s) 242, 308, 435
HincII GTYRAC 2 cut(s) 196, 331
HindII GTYRAC 2 cut(s) 196, 331
HinfI GANTC 3 cut(s) 612, 733, 740
HpaII CCGG 7 cut(s) 141, 170, 267, 357, 367, 432, 494
Hpy166II GTNNAC 3 cut(s) 196, 331, 518
Hpy188I TCNGA 4 cut(s) 49, 232, 549, 617
Hpy188III TCNNGA 4 cut(s) 57, 730, 737, 756
Hpy8I GTNNAC 3 cut(s) 196, 331, 518
Hpy99I CGWCG 9 cut(s) 10, 13, 28, 31, 63, 197, 200, 307, 335
HpyAV CCTTC 2 cut(s) 364, 835
HpyCH4III ACNGT 2 cut(s) 328, 753
HpyCH4IV ACGT 1 cut(s) 919
HpyCH4V TGCA 2 cut(s) 704, 946
HpyF3I CTNAG 4 cut(s) 521, 557, 627, 846
HpySE526I ACGT 1 cut(s) 919
Hsp92I GRCGYC 3 cut(s) 5, 61, 308
Hsp92II CATG 1 cut(s) 880
HspAI GCGC 3 cut(s) 242, 308, 435
KasI GGCGCC 1 cut(s) 307
KroI GCCGGC 3 cut(s) 140, 266, 431
KroNI GCCGGC 3 cut(s) 142, 268, 433
Ksp22I TGATCA 1 cut(s) 726
Kzo9I GATC 7 cut(s) 18, 49, 255, 544, 549, 599, 726
LmnI GCTCC 2 cut(s) 232, 685
Lsp1109I GCAGC 2 cut(s) 688, 883
MaeII ACGT 1 cut(s) 919
MalI GATC 7 cut(s) 20, 51, 257, 546, 551, 601, 728
MbiI CCGCTC 3 cut(s) 513, 525, 826
MboI GATC 7 cut(s) 18, 49, 255, 544, 549, 599, 726
MboII GAAGA 8 cut(s) 196, 395, 455, 592, 676, 827, 916, 921
MflI RGATCY 1 cut(s) 599
MhlI GDGCHC 2 cut(s) 237, 563
MluCI AATT 3 cut(s) 34, 73, 785
Mly113I GGCGCC 1 cut(s) 308
MlyI GAGTC 1 cut(s) 749
MmeI TCCRAC 1 cut(s) 589
MreI CGCCGGCG 1 cut(s) 140
MroNI GCCGGC 3 cut(s) 140, 266, 431
MseI TTAA 2 cut(s) 456, 867
MslI CAYNNNNRTG 1 cut(s) 946
MspCI CTTAAG 1 cut(s) 866
MspI CCGG 7 cut(s) 141, 170, 267, 357, 367, 432, 494
MspR9I CCNGG 1 cut(s) 673
MvaI CCWGG 1 cut(s) 673
MvnI CGCG 1 cut(s) 437
NaeI GCCGGC 3 cut(s) 142, 268, 433
NarI GGCGCC 1 cut(s) 308
NdeII GATC 7 cut(s) 18, 49, 255, 544, 549, 599, 726
NgoMIV GCCGGC 3 cut(s) 140, 266, 431
NlaIII CATG 1 cut(s) 880
NlaIV GGNNCC 4 cut(s) 309, 390, 601, 687
NmeAIII GCCGAG 3 cut(s) 159, 339, 345
PaeR7I CTCGAG 1 cut(s) 410
PcsI WCGNNNNNNNCGW 1 cut(s) 311
PdiI GCCGGC 3 cut(s) 142, 268, 433
PfeI GAWTC 2 cut(s) 612, 733
PflFI GACNNNGTC 1 cut(s) 335
PleI GAGTC 1 cut(s) 748
PluTI GGCGCC 1 cut(s) 311
PmaCI CACGTG 1 cut(s) 920
PmlI CACGTG 1 cut(s) 920
PpsI GAGTC 1 cut(s) 748
Ppu21I YACGTR 1 cut(s) 920
PpuMI RGGWCCY 1 cut(s) 388
Psp124BI GAGCTC 1 cut(s) 237
Psp5II RGGWCCY 1 cut(s) 388
Psp6I CCWGG 1 cut(s) 671
PspCI CACGTG 1 cut(s) 920
PspGI CCWGG 1 cut(s) 671
PspN4I GGNNCC 4 cut(s) 309, 390, 601, 687
PspPI GGNCC 5 cut(s) 172, 388, 429, 753, 852
PspPPI RGGWCCY 1 cut(s) 388
PspXI VCTCGAGB 1 cut(s) 410
PsuI RGATCY 1 cut(s) 599
PsyI GACNNNGTC 1 cut(s) 335
RseI CAYNNNNRTG 1 cut(s) 946
SacI GAGCTC 1 cut(s) 237
SalI GTCGAC 2 cut(s) 194, 329
SaqAI TTAA 2 cut(s) 456, 867
Sau3AI GATC 7 cut(s) 18, 49, 255, 544, 549, 599, 726
Sau96I GGNCC 5 cut(s) 172, 388, 429, 753, 852
SchI GAGTC 1 cut(s) 749
ScrFI CCNGG 1 cut(s) 673
SduI GDGCHC 2 cut(s) 237, 563
SfoI GGCGCC 1 cut(s) 309
Sfr274I CTCGAG 1 cut(s) 410
SgrAI CRCCGGYG 1 cut(s) 140
SgrDI CGTCGACG 1 cut(s) 194
SinI GGWCC 4 cut(s) 172, 388, 753, 852
SlaI CTCGAG 1 cut(s) 410
SmiMI CAYNNNNRTG 1 cut(s) 946
SmlI CTYRAG 2 cut(s) 410, 866
SmoI CTYRAG 2 cut(s) 410, 866
Sse9I AATT 3 cut(s) 34, 73, 785
SspDI GGCGCC 1 cut(s) 307
SspI AATATT 1 cut(s) 886
SstI GAGCTC 1 cut(s) 237
StyD4I CCNGG 1 cut(s) 671
TaaI ACNGT 2 cut(s) 328, 753
TaiI ACGT 1 cut(s) 922
TaqI TCGA 9 cut(s) 11, 185, 195, 237, 258, 330, 411, 543, 572
TaqII GACCGA 1 cut(s) 869
TasI AATT 3 cut(s) 34, 73, 785
TfiI GAWTC 2 cut(s) 612, 733
Tru1I TTAA 2 cut(s) 456, 867
Tru9I TTAA 2 cut(s) 456, 867
TscAI CASTG 2 cut(s) 561, 948
TseI GCWGC 2 cut(s) 701, 871
TspDTI ATGAA 1 cut(s) 149
TspGWI ACGGA 1 cut(s) 515
TspRI CASTG 2 cut(s) 561, 948
Tth111I GACNNNGTC 1 cut(s) 335
Vha464I CTTAAG 1 cut(s) 866
VpaK11BI GGWCC 4 cut(s) 172, 388, 753, 852
XapI RAATTY 1 cut(s) 34
XcmI CCANNNNNNNNNTGG 1 cut(s) 679
XhoI CTCGAG 1 cut(s) 410
XmiI GTMKAC 2 cut(s) 195, 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.