MD09G1048700.v1.1

PQQ enzyme repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0001008
Physical Location & Seq
Reverse (-)
3195438 .. 3198556
3119 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1048700.v1.1.491

Sequence Viewer

Length: 1605 bp
ATGGCAGCTTTAATATCGATATGCCACAATCTAATTTTAGTCTTTTCTCTATACACATGTAGTAGCACGACCAGTGCAGGAGGCCATTCACATGATGAGAACCCAGCAATACAAAACTGGTTAAACCACGGCGGAGATTTGTCAAACAGAAGATACGCCAACAGAGAGATCAAGATCAACCGTAGAACGGTTTCCAAACTGAGCTTGAATTGGGAGTTCTACGCCGGCGACGATATATCTGCAACGCCATCAATTTACGACGGCACCCTTTATTTTCCGAGCTGGAATGGGGAAATCTATGCTGTTCAAGCTTCCAATGGGTCTCTGGTTTGGAAGAAGAACTTGCATGAACTGACTGGGCTTAATGCAACCGGTTTTTCTGGTTTCAACTGGACGGTAGCAAGATCAACCCCAACAGTCGTTGATGATCAAGACCTTCTTATTGTTGGAATCTATGGACCTGCTGTTGTTATTGCACTTGAACGATCAACGGGGAATCTCATATGGTCAACCCTACTTGATACTCATGCCGCAGGTGTTATCACCATGTCCGGAACCTACTACAATGGGAGCATATACATTGGGACGTCATCACTAGAAGAAACCCTGAGCCCTGAGGAATGTTGTACCTTCCGTGGCAGCCTTGCCAAGTTGGATGCCAAATCCGGCACCGTATTGTGGAAGACCTTCATGCTGCCTGATAATCATGGACAGCTAGGGAGTTATTCCGGTGCAGCTATCTGGGGCAGCAGTCCATCCATCGACGTCCATAGAAAACATGTTTATATTGCTACTGGCAATGTGTACTCAGTCCCAGAAAATGTAAGTCAATGCCAAGAAAATCAGAACAATTCAACTCTACCCACTCATCCAGATGCATGTGTTGAGCCTGATAACCGCGGCAACTCAATCCTAGCCCTTGATCTGGACAGCGGCGATATCAAGTGGAACCACCATTTGGGCGGCTACGATGTTTGGTTTCTTGAGTGTTTCCTTAATACTTCAACCTGCCCAACCGGACCAAACGTGGATGCTGACTTTGGGGAGGCACCGATGATGCTCAAGACCTGTGTCAATGGAACCAAGCGAGATTTAGTTGTTGCTGTCCAAAAAAGTGGCTTTGCTTGGGCTCTAGATCGGAATAATGGCACCCTTATTTGGTCAACGGAAGCCGGACCTGGTGGCGTTGCCGGAGGAGGAACATGGGGAGCAGCTACAGACAAGAAAAAGGTGTACACCAACATTGCTAACTCTGAGTCCAGAAACTTTACTCTAAAACCATCTAGTAACATAACAACTTGGGGTGGATGGGTTGCAATGGCTCCTGAAAATGGCAAAATCTTATGGTCAACTGCCAATCCCAGCAATTCAACTTCTTCTGGTCCAGTTAGTGTCGCTAATGGTATTTTATTTGCTGGATCTACAAATCCGCGTGGCTCCATCTACGCAATGAACACTGAAAACGGAAAATTTTTGTGGTCCTATGACACTGGAGCATCCGTGTTCGGTGGCATGTCAATTAGTGATGGTTGCATTTACGTTGGCAGTGGATATAAACGTCAGTATACGGCCGGAACTTCACTCTTCGCCTTCTGTGTCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PQQ PQQ_2 PQQ_3

Protein Analysis

535

Amino Acids

57.39

Weight (kDa)

5.64

Isoelectric Point (pI)

30.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PQQ PF01011 40 - 390 2.6e-17 Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain
PQQ_2 PF13360 76 - 317 9.3e-12 Outer membrane protein assembly factor BamB
PQQ_2 PF13360 437 - 516 3.8e-08 Outer membrane protein assembly factor BamB
Beta-prop_ACSF4 PF13570 439 - 516 1.6e-06 Beta-alanine-activating enzyme, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 524
AatII GACGTC 2 cut(s) 590, 768
Acc36I ACCTGC 3 cut(s) 469, 524, 1016
AccB1I GGYRCC 4 cut(s) 263, 668, 1048, 1148
AccB7I CCANNNNNTGG 1 cut(s) 958
AccI GTMKAC 1 cut(s) 1565
AccII CGCG 2 cut(s) 900, 1432
AccIII TCCGGA 1 cut(s) 551
AciI CCGC 7 cut(s) 132, 531, 898, 900, 933, 963, 1430
AclWI GGATC 1 cut(s) 1426
AcoI YGGCCR 1 cut(s) 1569
AcsI RAATTY 1 cut(s) 1469
AcyI GRCGYC 2 cut(s) 587, 765
AfaI GTAC 3 cut(s) 628, 806, 1235
AfiI CCNNNNNNNGG 6 cut(s) 187, 678, 925, 958, 1158, 1331
AflIII ACRYGT 2 cut(s) 56, 778
AgeI ACCGGT 1 cut(s) 371
AgsI TTSAA 7 cut(s) 208, 308, 388, 482, 855, 1005, 1371
AjnI CCWGG 1 cut(s) 1177
AjuI GAANNNNNNNTTGG 2 cut(s) 941, 973
AluBI AGCT 7 cut(s) 8, 204, 282, 311, 715, 737, 1214
AluI AGCT 7 cut(s) 8, 204, 282, 311, 715, 737, 1214
Alw26I GTCTC 1 cut(s) 327
AlwI GGATC 1 cut(s) 1426
Aor13HI TCCGGA 1 cut(s) 551
AoxI GGCC 2 cut(s) 82, 1569
ApeKI GCWGC 6 cut(s) 5, 639, 694, 734, 747, 1211
ApoI RAATTY 1 cut(s) 1469
AsiGI ACCGGT 1 cut(s) 371
Asp700I GAANNNNTTC 2 cut(s) 190, 686
AspS9I GGNCC 5 cut(s) 458, 1019, 1175, 1382, 1479
AsuHPI GGTGA 1 cut(s) 535
AvaII GGWCC 5 cut(s) 458, 1019, 1175, 1382, 1479
AxyI CCTNAGG 1 cut(s) 615
BanI GGYRCC 4 cut(s) 263, 668, 1048, 1148
BanII GRGCYC 2 cut(s) 614, 1132
BbsI GAAGAC 1 cut(s) 689
BbvI GCAGC 6 cut(s) 17, 651, 681, 746, 759, 1223
BccI CCATC 7 cut(s) 256, 763, 767, 1288, 1302, 1448, 1520
BceAI ACGGC 3 cut(s) 145, 277, 1584
BcgI CGANNNNNNTGC 2 cut(s) 221, 255
BciT130I CCWGG 1 cut(s) 1179
BclI TGATCA 1 cut(s) 427
BcoDI GTCTC 1 cut(s) 327
BfaI CTAG 5 cut(s) 596, 716, 914, 1133, 1284
BfmI CTRYAG 1 cut(s) 1215
BfuAI ACCTGC 3 cut(s) 469, 524, 1016
Bme1390I CCNGG 1 cut(s) 1179
Bme18I GGWCC 5 cut(s) 458, 1019, 1175, 1382, 1479
BmgT120I GGNCC 5 cut(s) 458, 1019, 1175, 1382, 1479
BmiI GGNNCC 9 cut(s) 265, 556, 670, 950, 1050, 1081, 1150, 1323, 1438
BmrFI CCNGG 1 cut(s) 1179
BmrI ACTGGG 1 cut(s) 366
BmsI GCATC 5 cut(s) 646, 865, 1021, 1047, 1505
BmuI ACTGGG 1 cut(s) 366
BoxI GACNNNNGTC 1 cut(s) 1070
BpiI GAAGAC 1 cut(s) 689
BpmI CTGGAG 1 cut(s) 1512
Bpu10I CCTNAGC 1 cut(s) 608
BpuEI CTTGAG 2 cut(s) 1004, 1046
Bsa29I ATCGAT 1 cut(s) 17
BsaBI GATNNNNATC 1 cut(s) 173
BsaHI GRCGYC 2 cut(s) 587, 765
BsaI GGTCTC 1 cut(s) 327
BsaJI CCNNGG 3 cut(s) 127, 634, 898
BsaWI WCCGGW 4 cut(s) 371, 551, 728, 1016
BsaXI ACNNNNNCTCC 2 cut(s) 1485, 1515
Bsc4I CCNNNNNNNGG 6 cut(s) 187, 678, 925, 958, 1158, 1331
Bse118I RCCGGY 2 cut(s) 224, 371
Bse1I ACTGG 7 cut(s) 72, 122, 361, 395, 799, 1385, 1495
Bse21I CCTNAGG 1 cut(s) 615
Bse3DI GCAATG 4 cut(s) 805, 1242, 1323, 1455
Bse8I GATNNNNATC 1 cut(s) 173
BseAI TCCGGA 1 cut(s) 551
BseBI CCWGG 1 cut(s) 1179
BseCI ATCGAT 1 cut(s) 17
BseDI CCNNGG 3 cut(s) 127, 634, 898
BseGI GGATG 6 cut(s) 661, 755, 868, 1036, 1313, 1496
BseJI GATNNNNATC 1 cut(s) 173
BseLI CCNNNNNNNGG 6 cut(s) 187, 678, 925, 958, 1158, 1331
BseMI GCAATG 4 cut(s) 805, 1242, 1323, 1455
BseMII CTCAG 5 cut(s) 191, 599, 606, 822, 1245
BseNI ACTGG 7 cut(s) 72, 122, 361, 395, 799, 1385, 1495
BseRI GAGGAG 1 cut(s) 1209
BseX3I CGGCCG 1 cut(s) 1569
BseXI GCAGC 6 cut(s) 17, 651, 681, 746, 759, 1223
BseYI CCCAGC 2 cut(s) 103, 1361
BsgI GTGCAG 2 cut(s) 96, 753
Bsh1236I CGCG 2 cut(s) 900, 1432
Bsh1285I CGRYCG 1 cut(s) 1572
BshFI GGCC 2 cut(s) 84, 1571
BshNI GGYRCC 4 cut(s) 263, 668, 1048, 1148
BshTI ACCGGT 1 cut(s) 371
BshVI ATCGAT 1 cut(s) 17
BsiEI CGRYCG 1 cut(s) 1572
BsiSI CCGG 9 cut(s) 225, 372, 552, 666, 729, 1017, 1173, 1191, 1572
BslFI GGGAC 2 cut(s) 598, 797
BslI CCNNNNNNNGG 6 cut(s) 187, 678, 925, 958, 1158, 1331
BsmAI GTCTC 1 cut(s) 327
BsmFI GGGAC 2 cut(s) 598, 797
BsnI GGCC 2 cut(s) 84, 1571
Bso31I GGTCTC 1 cut(s) 327
Bsp1286I GDGCHC 2 cut(s) 614, 1132
Bsp13I TCCGGA 1 cut(s) 551
Bsp1407I TGTACA 1 cut(s) 1233
Bsp143I GATC 8 cut(s) 168, 174, 404, 427, 485, 922, 1135, 1418
BspACI CCGC 7 cut(s) 132, 531, 898, 900, 933, 963, 1430
BspANI GGCC 2 cut(s) 84, 1571
BspCNI CTCAG 5 cut(s) 192, 600, 607, 821, 1246
BspDI ATCGAT 1 cut(s) 17
BspEI TCCGGA 1 cut(s) 551
BspFNI CGCG 2 cut(s) 900, 1432
BspLI GGNNCC 9 cut(s) 265, 556, 670, 950, 1050, 1081, 1150, 1323, 1438
BspMI ACCTGC 3 cut(s) 469, 524, 1016
BspPI GGATC 1 cut(s) 1426
BspT107I GGYRCC 4 cut(s) 263, 668, 1048, 1148
BspTNI GGTCTC 1 cut(s) 327
BsrDI GCAATG 4 cut(s) 805, 1242, 1323, 1455
BsrFI RCCGGY 2 cut(s) 224, 371
BsrGI TGTACA 1 cut(s) 1233
BsrI ACTGG 7 cut(s) 72, 122, 361, 395, 799, 1385, 1495
BssAI RCCGGY 2 cut(s) 224, 371
BssECI CCNNGG 3 cut(s) 127, 634, 898
BssMI GATC 8 cut(s) 168, 174, 404, 427, 485, 922, 1135, 1418
BssNAI GTATAC 1 cut(s) 1566
BssNI GRCGYC 2 cut(s) 587, 765
Bst1107I GTATAC 1 cut(s) 1566
Bst2UI CCWGG 1 cut(s) 1179
Bst4CI ACNGT 5 cut(s) 182, 190, 397, 418, 673
Bst6I CTCTTC 1 cut(s) 1589
BstACI GRCGYC 2 cut(s) 587, 765
BstAUI TGTACA 1 cut(s) 1233
BstC8I GCNNGC 1 cut(s) 226
BstDEI CTNAG 5 cut(s) 200, 608, 615, 808, 1254
BstDSI CCRYGG 3 cut(s) 127, 634, 898
BstF5I GGATG 6 cut(s) 661, 755, 868, 1036, 1313, 1496
BstFNI CGCG 2 cut(s) 900, 1432
BstKTI GATC 8 cut(s) 171, 177, 407, 430, 488, 925, 1138, 1421
BstMAI GTCTC 1 cut(s) 327
BstMBI GATC 8 cut(s) 168, 174, 404, 427, 485, 922, 1135, 1418
BstMCI CGRYCG 1 cut(s) 1572
BstMWI GCNNNNNNNGC 1 cut(s) 308
BstNI CCWGG 1 cut(s) 1179
BstNSI RCATGY 4 cut(s) 60, 782, 882, 1516
BstPAI GACNNNNGTC 1 cut(s) 1070
BstSCI CCNGG 1 cut(s) 1177
BstSFI CTRYAG 1 cut(s) 1215
BstUI CGCG 2 cut(s) 900, 1432
BstV1I GCAGC 6 cut(s) 17, 651, 681, 746, 759, 1223
BstV2I GAAGAC 1 cut(s) 689
BstX2I RGATCY 1 cut(s) 1418
BstXI CCANNNNNNTGG 1 cut(s) 1115
BstYI RGATCY 1 cut(s) 1418
BstZ17I GTATAC 1 cut(s) 1566
BstZI CGGCCG 1 cut(s) 1569
Bsu15I ATCGAT 1 cut(s) 17
Bsu36I CCTNAGG 1 cut(s) 615
BsuRI GGCC 2 cut(s) 84, 1571
BsuTUI ATCGAT 1 cut(s) 17
BtgI CCRYGG 3 cut(s) 127, 634, 898
BtsCI GGATG 6 cut(s) 661, 755, 868, 1036, 1313, 1496
BtsI GCAGTG 1 cut(s) 1552
BtsIMutI CAGTG 4 cut(s) 79, 1455, 1488, 1552
BveI ACCTGC 3 cut(s) 469, 524, 1016
Cac8I GCNNGC 1 cut(s) 226
Cfr10I RCCGGY 2 cut(s) 224, 371
Cfr13I GGNCC 5 cut(s) 458, 1019, 1175, 1382, 1479
Cfr42I CCGCGG 1 cut(s) 901
ClaI ATCGAT 1 cut(s) 17
CsiI ACCWGGT 1 cut(s) 1177
Csp6I GTAC 3 cut(s) 627, 805, 1234
CspAI ACCGGT 1 cut(s) 371
CviQI GTAC 3 cut(s) 627, 805, 1234
DdeI CTNAG 5 cut(s) 200, 608, 615, 808, 1254
DpnI GATC 8 cut(s) 170, 176, 406, 429, 487, 924, 1137, 1420
DpnII GATC 8 cut(s) 168, 174, 404, 427, 485, 922, 1135, 1418
EaeI YGGCCR 1 cut(s) 1569
EagI CGGCCG 1 cut(s) 1569
Eam1104I CTCTTC 1 cut(s) 1589
EarI CTCTTC 1 cut(s) 1589
EciI GGCGGA 1 cut(s) 147
EclXI CGGCCG 1 cut(s) 1569
Eco24I GRGCYC 2 cut(s) 614, 1132
Eco31I GGTCTC 1 cut(s) 327
Eco32I GATATC 1 cut(s) 940
Eco47I GGWCC 5 cut(s) 458, 1019, 1175, 1382, 1479
Eco52I CGGCCG 1 cut(s) 1569
Eco81I CCTNAGG 1 cut(s) 615
EcoRII CCWGG 1 cut(s) 1177
EcoRV GATATC 1 cut(s) 940
EcoT22I ATGCAT 1 cut(s) 880
EcoT38I GRGCYC 2 cut(s) 614, 1132
FalI AAGNNNNNCTT 4 cut(s) 326, 358, 423, 455
FaqI GGGAC 2 cut(s) 598, 797
FauNDI CATATG 1 cut(s) 503
FbaI TGATCA 1 cut(s) 427
FblI GTMKAC 1 cut(s) 1565
FokI GGATG 6 cut(s) 668, 742, 855, 1043, 1320, 1483
FriOI GRGCYC 2 cut(s) 614, 1132
FspBI CTAG 5 cut(s) 596, 716, 914, 1133, 1284
GsaI CCCAGC 2 cut(s) 107, 1365
GsuI CTGGAG 1 cut(s) 1512
HaeIII GGCC 2 cut(s) 84, 1571
HapII CCGG 9 cut(s) 225, 372, 552, 666, 729, 1017, 1173, 1191, 1572
Hin1I GRCGYC 2 cut(s) 587, 765
HincII GTYRAC 3 cut(s) 510, 1164, 1350
HindII GTYRAC 3 cut(s) 510, 1164, 1350
HindIII AAGCTT 1 cut(s) 309
HinfI GANTC 3 cut(s) 450, 496, 1256
HpaII CCGG 9 cut(s) 225, 372, 552, 666, 729, 1017, 1173, 1191, 1572
HphI GGTGA 1 cut(s) 535
Hpy166II GTNNAC 7 cut(s) 510, 805, 1164, 1234, 1236, 1350, 1566
Hpy188I TCNGA 4 cut(s) 279, 846, 1140, 1255
Hpy8I GTNNAC 7 cut(s) 510, 805, 1164, 1234, 1236, 1350, 1566
Hpy99I CGWCG 3 cut(s) 233, 263, 767
HpyAV CCTTC 4 cut(s) 446, 640, 697, 1600
HpyCH4III ACNGT 5 cut(s) 182, 190, 397, 418, 673
HpyCH4IV ACGT 5 cut(s) 587, 765, 1026, 1539, 1558
HpyCH4V TGCA 9 cut(s) 77, 242, 346, 368, 476, 734, 878, 1316, 1533
HpyF10VI GCNNNNNNNGC 1 cut(s) 308
HpyF3I CTNAG 5 cut(s) 200, 608, 615, 808, 1254
HpySE526I ACGT 5 cut(s) 587, 765, 1026, 1539, 1558
Hsp92I GRCGYC 2 cut(s) 587, 765
Kpn2I TCCGGA 1 cut(s) 551
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
Ksp22I TGATCA 1 cut(s) 427
KspI CCGCGG 1 cut(s) 901
Kzo9I GATC 8 cut(s) 168, 174, 404, 427, 485, 922, 1135, 1418
LmnI GCTCC 5 cut(s) 570, 1208, 1327, 1442, 1493
Lsp1109I GCAGC 6 cut(s) 17, 651, 681, 746, 759, 1223
LweI GCATC 5 cut(s) 646, 865, 1021, 1047, 1505
MabI ACCWGGT 1 cut(s) 1177
MaeI CTAG 5 cut(s) 596, 716, 914, 1133, 1284
MaeII ACGT 5 cut(s) 587, 765, 1026, 1539, 1558
MaeIII GTNAC 2 cut(s) 1286, 1597
MalI GATC 8 cut(s) 170, 176, 406, 429, 487, 924, 1137, 1420
MboI GATC 8 cut(s) 168, 174, 404, 427, 485, 922, 1135, 1418
MboII GAAGA 7 cut(s) 162, 346, 349, 611, 694, 1368, 1576
MflI RGATCY 1 cut(s) 1418
MhlI GDGCHC 2 cut(s) 614, 1132
MluCI AATT 7 cut(s) 33, 208, 252, 850, 1366, 1469, 1518
MlyI GAGTC 1 cut(s) 1265
MmeI TCCRAC 2 cut(s) 427, 633
MnlI CCTC 5 cut(s) 74, 610, 1039, 1187, 1190
Mph1103I ATGCAT 1 cut(s) 880
MreI CGCCGGCG 1 cut(s) 224
MroI TCCGGA 1 cut(s) 551
MroNI GCCGGC 1 cut(s) 224
MroXI GAANNNNTTC 2 cut(s) 190, 686
MseI TTAA 4 cut(s) 11, 122, 363, 996
MslI CAYNNNNRTG 2 cut(s) 90, 873
MspA1I CMGCKG 2 cut(s) 900, 933
MspI CCGG 9 cut(s) 225, 372, 552, 666, 729, 1017, 1173, 1191, 1572
MspR9I CCNGG 1 cut(s) 1179
MvaI CCWGG 1 cut(s) 1179
MvnI CGCG 2 cut(s) 900, 1432
MwoI GCNNNNNNNGC 1 cut(s) 308
NaeI GCCGGC 1 cut(s) 226
NdeI CATATG 1 cut(s) 503
NdeII GATC 8 cut(s) 168, 174, 404, 427, 485, 922, 1135, 1418
NgoMIV GCCGGC 1 cut(s) 224
NlaIV GGNNCC 9 cut(s) 265, 556, 670, 950, 1050, 1081, 1150, 1323, 1438
NmuCI GTSAC 1 cut(s) 1597
NsiI ATGCAT 1 cut(s) 880
NspI RCATGY 4 cut(s) 60, 782, 882, 1516
PaqCI CACCTGC 1 cut(s) 524
PciI ACATGT 2 cut(s) 56, 778
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PdiI GCCGGC 1 cut(s) 226
PdmI GAANNNNTTC 2 cut(s) 190, 686
PfeI GAWTC 2 cut(s) 450, 496
PflMI CCANNNNNTGG 1 cut(s) 958
PinAI ACCGGT 1 cut(s) 371
PleI GAGTC 1 cut(s) 1264
PpsI GAGTC 1 cut(s) 1264
PscI ACATGT 2 cut(s) 56, 778
PshAI GACNNNNGTC 1 cut(s) 1070
Psp6I CCWGG 1 cut(s) 1177
PspFI CCCAGC 2 cut(s) 103, 1361
PspGI CCWGG 1 cut(s) 1177
PspN4I GGNNCC 9 cut(s) 265, 556, 670, 950, 1050, 1081, 1150, 1323, 1438
PspPI GGNCC 5 cut(s) 458, 1019, 1175, 1382, 1479
PsuI RGATCY 1 cut(s) 1418
RsaI GTAC 3 cut(s) 628, 806, 1235
RsaNI GTAC 3 cut(s) 627, 805, 1234
RseI CAYNNNNRTG 2 cut(s) 90, 873
SacII CCGCGG 1 cut(s) 901
SaqAI TTAA 4 cut(s) 11, 122, 363, 996
Sau3AI GATC 8 cut(s) 168, 174, 404, 427, 485, 922, 1135, 1418
Sau96I GGNCC 5 cut(s) 458, 1019, 1175, 1382, 1479
SchI GAGTC 1 cut(s) 1265
ScrFI CCNGG 1 cut(s) 1179
SduI GDGCHC 2 cut(s) 614, 1132
SexAI ACCWGGT 1 cut(s) 1177
SfaNI GCATC 5 cut(s) 646, 865, 1021, 1047, 1505
SfcI CTRYAG 1 cut(s) 1215
Sfr303I CCGCGG 1 cut(s) 901
SgrAI CRCCGGYG 1 cut(s) 224
SgrBI CCGCGG 1 cut(s) 901
SinI GGWCC 5 cut(s) 458, 1019, 1175, 1382, 1479
SmiMI CAYNNNNRTG 2 cut(s) 90, 873
SmlI CTYRAG 2 cut(s) 983, 1061
SmoI CTYRAG 2 cut(s) 983, 1061
Sse9I AATT 7 cut(s) 33, 208, 252, 850, 1366, 1469, 1518
SsiI CCGC 7 cut(s) 132, 531, 898, 900, 933, 963, 1430
SspMI CTAG 5 cut(s) 596, 716, 914, 1133, 1284
StyD4I CCNGG 1 cut(s) 1177
TaaI ACNGT 5 cut(s) 182, 190, 397, 418, 673
TaiI ACGT 5 cut(s) 590, 768, 1029, 1542, 1561
TaqI TCGA 2 cut(s) 17, 762
TasI AATT 7 cut(s) 33, 208, 252, 850, 1366, 1469, 1518
TatI WGTACW 2 cut(s) 804, 1233
TauI GCSGC 4 cut(s) 533, 903, 936, 966
TfiI GAWTC 2 cut(s) 450, 496
Tru1I TTAA 4 cut(s) 11, 122, 363, 996
Tru9I TTAA 4 cut(s) 11, 122, 363, 996
TscAI CASTG 4 cut(s) 79, 1462, 1495, 1552
TseFI GTSAC 1 cut(s) 1597
TseI GCWGC 6 cut(s) 5, 639, 694, 734, 747, 1211
Tsp45I GTSAC 1 cut(s) 1597
TspDTI ATGAA 3 cut(s) 363, 679, 1466
TspGWI ACGGA 4 cut(s) 623, 1181, 1479, 1489
TspRI CASTG 4 cut(s) 79, 1462, 1495, 1552
Van91I CCANNNNNTGG 1 cut(s) 958
VpaK11BI GGWCC 5 cut(s) 458, 1019, 1175, 1382, 1479
XapI RAATTY 1 cut(s) 1469
XbaI TCTAGA 1 cut(s) 1132
XceI RCATGY 4 cut(s) 60, 782, 882, 1516
XcmI CCANNNNNNNNNTGG 1 cut(s) 322
XmiI GTMKAC 1 cut(s) 1565
XmnI GAANNNNTTC 2 cut(s) 190, 686
XspI CTAG 5 cut(s) 596, 716, 914, 1133, 1284
ZraI GACGTC 2 cut(s) 588, 766
Zsp2I ATGCAT 1 cut(s) 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.