Rroxscaffold_2G00082560

PQQ-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0001008
Physical Location & Seq
Reverse (-)
5355476 .. 5357855
2380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00082560.1

Sequence Viewer

Length: 1671 bp
ATGTATGTTCTATATAGCTATGACACCAAGCTCAGGTTTCAATATTGTAAGCCTCCCTCGCACTCTCTCATTAATTTGTTACCTGCTGATTGTTCACAAATTGTTGGTTCACTTGGTTGTTTCCAGTGGCCTTCTGCAGAGAAGTACAAGCCTAGTACTCAAGATTGGCCGAACCATGGAGGAGACTTGTATAACAGAAGATATGCTAACACGGAGAAGAAGATAAGCCCTGCAACAGTTTCCAATCTCAGTGTGAAGTGGAAATTCTCTGTGGGAGGTGACATAACTGTAACACCAGCCATTTCTGATGGCATTCTCTACTTCCCAAGCTGGAATGGATATCTCTACGCCGTTAAAGAATCTGATGGATCCCTTGTCTGGAAGAAGAATGTGCAGAAGTTGACAGGCTTCAATAACACTGGCTTCATTCTCAATGTCAACTCCACGGTAGCAAGATCAACCCCAACAATTGCCGGTGACCTGCTCATTGTCGGAATCTATGGTCCTGCTTTCGTTATTGCTGTCAAAAGGTCCAATGGGAAGCTCGTCTGGTCTACCAGGGTTGATAACCACTCCAGAGCCTTTGTCACCATGTCTGGAACCTATTACAATGGGGGATACTATGTCGGAACATCCTCTCTAGAAGAAGGCCTCACCATCGATCTGTGCTGCACATTTCGTGGGAGCTTCCTTAGATTAGATGTCCAAACAGGAGCAATCTTGTGGCAGACCTTCATGCTACCAGACAACTTTGGCAAGTTTGGAGAGTACGCTGGTGCAGCAATCTGGGGAAGTAGTCCTTCTATCGATGTGAAGCGTAACCATGTCTATATTGCCACTTCGAACCTGTATTCAGCTCCTCCGCGTATAATTGAATGCCAGGAGAGGGAAAATAATCAAACCATACCTTCACAACCAGATGCCTGCATTGAGCCTGACAACCACTCCGAGTCTATTGTAGCCCTTGATTTAGACACCGGCAAAATCAAATGGTACAAGCAGCTGGGAGGCTATGATATATGGTTCGGTGCATGCCATCGGCATTTGGACCCAAGGTGCCCTCCCGGTCCAAGTCCAGACGCTGATTTTGGGGAAGCACCAATGATGCTTACCGCAAAAATTAATGGGACTAAGAGAGATATAGTAGTTGCTGTTCAGAAAAGTGGGTTTGCATGGGCTCTGGATCGAGATACTGGTAGCGTAGTGTGGTCTACGGAAGCTGGACCAGGAGGCTTAGGAGGAGGAGCCATGTGGGGTGCAGCCACTGACGAAAAGAGGGTCTATACTAACATTGCCAACAGCCAACACAAGAACTTCACCCTAAAACCATCCCAGAACACTACAATTGCTGGTGGATGGGTAGCAATGGAGGCTCGCAGTGGCAATATCTTATGGTCCACGGCCAATGCTAATGATGCTACCGCCCCGGCTGCAGTTACTGTGGCTAATGGTGTTGTTTTTGGTGGCTCCACGTACCGGCAAGGACCAATATATGCAATGAATGCCAAGACAGGAAAGATTTTGTGGTCTTATGATACAGGAGCAACTGTGTATGGGGGGATTTCGGTAAGCAATGGATGCATTTACCTCGGAAATGGTTACAAGGTCTTTAATGGATTTGTGAACCCAAATTACACTGCAGGAACCTCGTTCTATGCCTTCTGTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PQQ PQQ_2 PQQ_3

Protein Analysis

556

Amino Acids

60.47

Weight (kDa)

8.46

Isoelectric Point (pI)

34.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_ACSF4 PF13570 79 - 133 5.5e-06 Beta-alanine-activating enzyme, beta-propeller
PQQ_2 PF13360 87 - 331 2.4e-10 Outer membrane protein assembly factor BamB
PQQ PF01011 234 - 406 3.3e-12 Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain
PQQ_2 PF13360 452 - 530 4.9e-07 Outer membrane protein assembly factor BamB
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 91, 489
AccB1I GGYRCC 1 cut(s) 1056
AccI GTMKAC 2 cut(s) 554, 1211
AccII CGCG 1 cut(s) 865
AciI CCGC 3 cut(s) 863, 1113, 1422
AclWI GGATC 3 cut(s) 363, 376, 1191
AcoI YGGCCR 2 cut(s) 167, 1401
AcsI RAATTY 1 cut(s) 263
AfaI GTAC 5 cut(s) 146, 157, 770, 995, 1475
AfiI CCNNNNNNNGG 5 cut(s) 33, 176, 378, 886, 1476
AgsI TTSAA 3 cut(s) 41, 412, 875
AjnI CCWGG 3 cut(s) 557, 879, 1225
AluBI AGCT 8 cut(s) 18, 31, 330, 544, 687, 857, 1003, 1220
AluI AGCT 8 cut(s) 18, 31, 330, 544, 687, 857, 1003, 1220
Alw26I GTCTC 1 cut(s) 177
AlwI GGATC 3 cut(s) 363, 376, 1191
AlwNI CAGNNNCTG 3 cut(s) 1082, 1265, 1439
AoxI GGCC 4 cut(s) 128, 167, 649, 1401
ApeKI GCWGC 5 cut(s) 669, 779, 1000, 1259, 1430
ApoI RAATTY 1 cut(s) 263
ArsI GACNNNNNNTTYG 4 cut(s) 1070, 1102, 1263, 1295
AseI ATTAAT 2 cut(s) 72, 1122
AspS9I GGNCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
AsuC2I CCSGG 2 cut(s) 1065, 1427
AsuHPI GGTGA 5 cut(s) 290, 488, 580, 646, 1309
AsuII TTCGAA 1 cut(s) 842
AvaII GGWCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
BaeGI GKGCMC 1 cut(s) 1061
BamHI GGATCC 1 cut(s) 368
BanI GGYRCC 1 cut(s) 1056
BanII GRGCYC 1 cut(s) 1180
BbvI GCAGC 5 cut(s) 656, 791, 1012, 1271, 1417
BccI CCATC 6 cut(s) 302, 359, 665, 1044, 1336, 1350
BceAI ACGGC 2 cut(s) 335, 1416
BcgI CGANNNNNNTGC 4 cut(s) 1570, 1604, 1629, 1663
BciT130I CCWGG 3 cut(s) 559, 881, 1227
BciVI GTATCC 1 cut(s) 611
BcnI CCSGG 2 cut(s) 1065, 1427
BcoDI GTCTC 1 cut(s) 177
BfaI CTAG 2 cut(s) 153, 641
BfmI CTRYAG 3 cut(s) 135, 1431, 1638
BfuAI ACCTGC 2 cut(s) 91, 489
BfuI GTATCC 1 cut(s) 611
BisI GCNGC 5 cut(s) 670, 780, 1001, 1260, 1431
BlsI GCNGC 5 cut(s) 671, 781, 1002, 1261, 1432
BmcAI AGTACT 1 cut(s) 157
Bme1390I CCNGG 5 cut(s) 559, 881, 1065, 1227, 1427
Bme18I GGWCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
BmgT120I GGNCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
BmiI GGNNCC 7 cut(s) 370, 601, 1050, 1058, 1246, 1468, 1645
BmrFI CCNGG 5 cut(s) 559, 881, 1065, 1227, 1427
BmsI GCATC 4 cut(s) 910, 1095, 1405, 1568
BpmI CTGGAG 1 cut(s) 559
Bpu10I CCTNAGC 2 cut(s) 32, 1234
Bpu14I TTCGAA 1 cut(s) 842
BpuEI CTTGAG 1 cut(s) 144
BpuMI CCSGG 2 cut(s) 1065, 1427
Bsa29I ATCGAT 2 cut(s) 660, 807
BsaAI YACGTR 1 cut(s) 1473
BsaJI CCNNGG 7 cut(s) 175, 444, 558, 1052, 1398, 1425, 1588
BsaXI ACNNNNNCTCC 4 cut(s) 929, 959, 1533, 1563
Bsc4I CCNNNNNNNGG 5 cut(s) 33, 176, 378, 886, 1476
Bse118I RCCGGY 3 cut(s) 473, 977, 1476
Bse1I ACTGG 3 cut(s) 124, 424, 1198
Bse3DI GCAATG 4 cut(s) 1290, 1371, 1503, 1579
BseBI CCWGG 3 cut(s) 559, 881, 1227
BseCI ATCGAT 2 cut(s) 660, 807
BseDI CCNNGG 7 cut(s) 175, 444, 558, 1052, 1398, 1425, 1588
BseGI GGATG 4 cut(s) 632, 1328, 1361, 1583
BseLI CCNNNNNNNGG 5 cut(s) 33, 176, 378, 886, 1476
BseMI GCAATG 4 cut(s) 1290, 1371, 1503, 1579
BseMII CTCAG 2 cut(s) 46, 262
BseNI ACTGG 3 cut(s) 124, 424, 1198
BseRI GAGGAG 4 cut(s) 195, 849, 1254, 1257
BseSI GKGCMC 1 cut(s) 1061
BseXI GCAGC 5 cut(s) 656, 791, 1012, 1271, 1417
BseYI CCCAGC 1 cut(s) 1003
BsgI GTGCAG 4 cut(s) 413, 655, 798, 1278
Bsh1236I CGCG 1 cut(s) 865
BshFI GGCC 4 cut(s) 130, 169, 651, 1403
BshNI GGYRCC 1 cut(s) 1056
BshVI ATCGAT 2 cut(s) 660, 807
BsiSI CCGG 5 cut(s) 474, 978, 1065, 1427, 1477
BslFI GGGAC 1 cut(s) 1141
BslI CCNNNNNNNGG 5 cut(s) 33, 176, 378, 886, 1476
BsmAI GTCTC 1 cut(s) 177
BsmFI GGGAC 1 cut(s) 1141
BsmI GAATGC 3 cut(s) 312, 881, 1507
BsnI GGCC 4 cut(s) 130, 169, 651, 1403
Bsp119I TTCGAA 1 cut(s) 842
Bsp1286I GDGCHC 2 cut(s) 1061, 1180
Bsp143I GATC 4 cut(s) 368, 455, 661, 1183
Bsp19I CCATGG 1 cut(s) 175
BspACI CCGC 3 cut(s) 863, 1113, 1422
BspANI GGCC 4 cut(s) 130, 169, 651, 1403
BspCNI CTCAG 2 cut(s) 45, 261
BspDI ATCGAT 2 cut(s) 660, 807
BspFNI CGCG 1 cut(s) 865
BspLI GGNNCC 7 cut(s) 370, 601, 1050, 1058, 1246, 1468, 1645
BspMAI CTGCAG 3 cut(s) 139, 1435, 1642
BspMI ACCTGC 2 cut(s) 91, 489
BspPI GGATC 3 cut(s) 363, 376, 1191
BspT104I TTCGAA 1 cut(s) 842
BspT107I GGYRCC 1 cut(s) 1056
BsrDI GCAATG 4 cut(s) 1290, 1371, 1503, 1579
BsrFI RCCGGY 3 cut(s) 473, 977, 1476
BsrI ACTGG 3 cut(s) 124, 424, 1198
BssAI RCCGGY 3 cut(s) 473, 977, 1476
BssECI CCNNGG 7 cut(s) 175, 444, 558, 1052, 1398, 1425, 1588
BssMI GATC 4 cut(s) 368, 455, 661, 1183
BssT1I CCWWGG 2 cut(s) 175, 1052
Bst2UI CCWGG 3 cut(s) 559, 881, 1227
Bst4CI ACNGT 5 cut(s) 238, 289, 448, 1441, 1549
BstAPI GCANNNNNTGC 2 cut(s) 1502, 1578
BstBAI YACGTR 1 cut(s) 1473
BstBI TTCGAA 1 cut(s) 842
BstC8I GCNNGC 3 cut(s) 925, 1033, 1375
BstDEI CTNAG 5 cut(s) 32, 248, 692, 1131, 1234
BstDSI CCRYGG 3 cut(s) 175, 444, 1398
BstEII GGTNACC 1 cut(s) 476
BstF5I GGATG 4 cut(s) 632, 1328, 1361, 1583
BstFNI CGCG 1 cut(s) 865
BstKTI GATC 4 cut(s) 371, 458, 664, 1186
BstMAI GTCTC 1 cut(s) 177
BstMBI GATC 4 cut(s) 368, 455, 661, 1183
BstMWI GCNNNNNNNGC 7 cut(s) 58, 779, 1370, 1415, 1430, 1502, 1578
BstNI CCWGG 3 cut(s) 559, 881, 1227
BstNSI RCATGY 1 cut(s) 1035
BstPI GGTNACC 1 cut(s) 476
BstSCI CCNGG 5 cut(s) 557, 879, 1063, 1225, 1425
BstSFI CTRYAG 3 cut(s) 135, 1431, 1638
BstSLI GKGCMC 1 cut(s) 1061
BstUI CGCG 1 cut(s) 865
BstV1I GCAGC 5 cut(s) 656, 791, 1012, 1271, 1417
BstX2I RGATCY 1 cut(s) 368
BstYI RGATCY 1 cut(s) 368
Bsu15I ATCGAT 2 cut(s) 660, 807
BsuI GTATCC 1 cut(s) 611
BsuRI GGCC 4 cut(s) 130, 169, 651, 1403
BsuTUI ATCGAT 2 cut(s) 660, 807
BtgI CCRYGG 3 cut(s) 175, 444, 1398
BtsCI GGATG 4 cut(s) 632, 1328, 1361, 1583
BtsI GCAGTG 2 cut(s) 1384, 1635
BtsIMutI CAGTG 6 cut(s) 131, 256, 417, 1263, 1384, 1635
BveI ACCTGC 2 cut(s) 91, 489
Cac8I GCNNGC 3 cut(s) 925, 1033, 1375
CaiI CAGNNNCTG 3 cut(s) 1082, 1265, 1439
Cfr10I RCCGGY 3 cut(s) 473, 977, 1476
Cfr13I GGNCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
ClaI ATCGAT 2 cut(s) 660, 807
CseI GACGC 1 cut(s) 1088
Csp6I GTAC 5 cut(s) 145, 156, 769, 994, 1474
CviAII CATG 7 cut(s) 176, 592, 736, 824, 1032, 1173, 1249
CviQI GTAC 5 cut(s) 145, 156, 769, 994, 1474
DdeI CTNAG 5 cut(s) 32, 248, 692, 1131, 1234
DpnI GATC 4 cut(s) 370, 457, 663, 1185
DpnII GATC 4 cut(s) 368, 455, 661, 1183
EaeI YGGCCR 2 cut(s) 167, 1401
Eco130I CCWWGG 2 cut(s) 175, 1052
Eco147I AGGCCT 1 cut(s) 651
Eco24I GRGCYC 1 cut(s) 1180
Eco32I GATATC 1 cut(s) 341
Eco47I GGWCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
Eco91I GGTNACC 1 cut(s) 476
EcoO65I GGTNACC 1 cut(s) 476
EcoRII CCWGG 3 cut(s) 557, 879, 1225
EcoRV GATATC 1 cut(s) 341
EcoT14I CCWWGG 2 cut(s) 175, 1052
EcoT22I ATGCAT 1 cut(s) 1583
EcoT38I GRGCYC 1 cut(s) 1180
ErhI CCWWGG 2 cut(s) 175, 1052
FaeI CATG 7 cut(s) 179, 595, 739, 827, 1035, 1176, 1252
FalI AAGNNNNNCTT 2 cut(s) 784, 816
FaqI GGGAC 1 cut(s) 1141
FatI CATG 7 cut(s) 175, 591, 735, 823, 1031, 1172, 1248
FblI GTMKAC 2 cut(s) 554, 1211
Fnu4HI GCNGC 5 cut(s) 670, 780, 1001, 1260, 1431
FokI GGATG 4 cut(s) 619, 1315, 1368, 1590
FriOI GRGCYC 1 cut(s) 1180
Fsp4HI GCNGC 5 cut(s) 670, 780, 1001, 1260, 1431
FspBI CTAG 2 cut(s) 153, 641
GluI GCNGC 5 cut(s) 670, 780, 1001, 1260, 1431
GsaI CCCAGC 1 cut(s) 1007
GsuI CTGGAG 1 cut(s) 559
HaeIII GGCC 4 cut(s) 130, 169, 651, 1403
HapII CCGG 5 cut(s) 474, 978, 1065, 1427, 1477
HgaI GACGC 1 cut(s) 1088
Hin1II CATG 7 cut(s) 179, 595, 739, 827, 1035, 1176, 1252
HincII GTYRAC 2 cut(s) 402, 439
HindII GTYRAC 2 cut(s) 402, 439
HinfI GANTC 3 cut(s) 359, 495, 950
HpaII CCGG 5 cut(s) 474, 978, 1065, 1427, 1477
HphI GGTGA 5 cut(s) 290, 488, 580, 646, 1309
Hpy166II GTNNAC 8 cut(s) 95, 110, 402, 439, 555, 1212, 1398, 1624
Hpy188I TCNGA 7 cut(s) 307, 364, 494, 629, 949, 1158, 1592
Hpy188III TCNNGA 8 cut(s) 161, 379, 576, 597, 641, 1076, 1181, 1187
Hpy8I GTNNAC 8 cut(s) 95, 110, 402, 439, 555, 1212, 1398, 1624
HpyAV CCTTC 6 cut(s) 141, 641, 742, 810, 918, 1669
HpyCH4III ACNGT 5 cut(s) 238, 289, 448, 1441, 1549
HpyCH4IV ACGT 1 cut(s) 1472
HpyF10VI GCNNNNNNNGC 7 cut(s) 58, 779, 1370, 1415, 1430, 1502, 1578
HpyF3I CTNAG 5 cut(s) 32, 248, 692, 1131, 1234
HpySE526I ACGT 1 cut(s) 1472
Hsp92II CATG 7 cut(s) 179, 595, 739, 827, 1035, 1176, 1252
Kzo9I GATC 4 cut(s) 368, 455, 661, 1183
LmnI GCTCC 6 cut(s) 684, 713, 862, 1244, 1472, 1541
Lsp1109I GCAGC 5 cut(s) 656, 791, 1012, 1271, 1417
LweI GCATC 4 cut(s) 910, 1095, 1405, 1568
MaeI CTAG 2 cut(s) 153, 641
MaeII ACGT 1 cut(s) 1472
MaeIII GTNAC 8 cut(s) 78, 278, 289, 476, 586, 818, 1435, 1598
MalI GATC 4 cut(s) 370, 457, 663, 1185
MboI GATC 4 cut(s) 368, 455, 661, 1183
MboII GAAGA 6 cut(s) 210, 229, 232, 394, 397, 656
MfeI CAATTG 2 cut(s) 468, 1344
MflI RGATCY 1 cut(s) 368
MhlI GDGCHC 2 cut(s) 1061, 1180
MluCI AATT 8 cut(s) 73, 99, 263, 468, 870, 1119, 1344, 1630
MlyI GAGTC 1 cut(s) 959
MmeI TCCRAC 2 cut(s) 472, 607
Mph1103I ATGCAT 1 cut(s) 1583
MseI TTAA 5 cut(s) 72, 354, 1122, 1611, 1669
MspA1I CMGCKG 1 cut(s) 1003
MspI CCGG 5 cut(s) 474, 978, 1065, 1427, 1477
MspR9I CCNGG 5 cut(s) 559, 881, 1065, 1227, 1427
MunI CAATTG 2 cut(s) 468, 1344
Mva1269I GAATGC 3 cut(s) 312, 881, 1507
MvaI CCWGG 3 cut(s) 559, 881, 1227
MvnI CGCG 1 cut(s) 865
MwoI GCNNNNNNNGC 7 cut(s) 58, 779, 1370, 1415, 1430, 1502, 1578
NciI CCSGG 2 cut(s) 1065, 1427
NcoI CCATGG 1 cut(s) 175
NdeII GATC 4 cut(s) 368, 455, 661, 1183
NlaIII CATG 7 cut(s) 179, 595, 739, 827, 1035, 1176, 1252
NlaIV GGNNCC 7 cut(s) 370, 601, 1050, 1058, 1246, 1468, 1645
NmuCI GTSAC 3 cut(s) 278, 476, 586
NsiI ATGCAT 1 cut(s) 1583
NspI RCATGY 1 cut(s) 1035
NspV TTCGAA 1 cut(s) 842
PaeI GCATGC 1 cut(s) 1035
PceI AGGCCT 1 cut(s) 651
PctI GAATGC 3 cut(s) 312, 881, 1507
PfeI GAWTC 2 cut(s) 359, 495
PkrI GCNGC 5 cut(s) 671, 781, 1002, 1261, 1432
PleI GAGTC 1 cut(s) 958
PpsI GAGTC 1 cut(s) 958
Ppu21I YACGTR 1 cut(s) 1473
PshBI ATTAAT 2 cut(s) 72, 1122
Psp6I CCWGG 3 cut(s) 557, 879, 1225
PspEI GGTNACC 1 cut(s) 476
PspFI CCCAGC 1 cut(s) 1003
PspGI CCWGG 3 cut(s) 557, 879, 1225
PspN4I GGNNCC 7 cut(s) 370, 601, 1050, 1058, 1246, 1468, 1645
PspPI GGNCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
PsrI GAACNNNNNNTAC 4 cut(s) 1137, 1169, 1616, 1648
PstI CTGCAG 3 cut(s) 139, 1435, 1642
PstNI CAGNNNCTG 3 cut(s) 1082, 1265, 1439
PsuI RGATCY 1 cut(s) 368
PvuII CAGCTG 1 cut(s) 1003
RsaI GTAC 5 cut(s) 146, 157, 770, 995, 1475
RsaNI GTAC 5 cut(s) 145, 156, 769, 994, 1474
SaqAI TTAA 5 cut(s) 72, 354, 1122, 1611, 1669
SatI GCNGC 5 cut(s) 670, 780, 1001, 1260, 1431
Sau3AI GATC 4 cut(s) 368, 455, 661, 1183
Sau96I GGNCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
ScaI AGTACT 1 cut(s) 157
SchI GAGTC 1 cut(s) 959
ScrFI CCNGG 5 cut(s) 559, 881, 1065, 1227, 1427
SduI GDGCHC 2 cut(s) 1061, 1180
SfaNI GCATC 4 cut(s) 910, 1095, 1405, 1568
SfcI CTRYAG 3 cut(s) 135, 1431, 1638
SfuI TTCGAA 1 cut(s) 842
SinI GGWCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
SmlI CTYRAG 1 cut(s) 159
SmoI CTYRAG 1 cut(s) 159
SphI GCATGC 1 cut(s) 1035
Sse9I AATT 8 cut(s) 73, 99, 263, 468, 870, 1119, 1344, 1630
SseBI AGGCCT 1 cut(s) 651
SsiI CCGC 3 cut(s) 863, 1113, 1422
SspI AATATT 1 cut(s) 44
SspMI CTAG 2 cut(s) 153, 641
StuI AGGCCT 1 cut(s) 651
StyD4I CCNGG 5 cut(s) 557, 879, 1063, 1225, 1425
StyI CCWWGG 2 cut(s) 175, 1052
TaaI ACNGT 5 cut(s) 238, 289, 448, 1441, 1549
TaiI ACGT 1 cut(s) 1475
TaqI TCGA 4 cut(s) 660, 807, 842, 1186
TasI AATT 8 cut(s) 73, 99, 263, 468, 870, 1119, 1344, 1630
TatI WGTACW 2 cut(s) 144, 155
TfiI GAWTC 2 cut(s) 359, 495
Tru1I TTAA 5 cut(s) 72, 354, 1122, 1611, 1669
Tru9I TTAA 5 cut(s) 72, 354, 1122, 1611, 1669
TscAI CASTG 6 cut(s) 131, 256, 424, 1270, 1384, 1642
TseFI GTSAC 3 cut(s) 278, 476, 586
TseI GCWGC 5 cut(s) 669, 779, 1000, 1259, 1430
Tsp45I GTSAC 3 cut(s) 278, 476, 586
TspDTI ATGAA 3 cut(s) 415, 724, 1514
TspGWI ACGGA 2 cut(s) 227, 1229
TspRI CASTG 6 cut(s) 131, 256, 424, 1270, 1384, 1642
VpaK11BI GGWCC 7 cut(s) 503, 531, 1048, 1067, 1223, 1395, 1484
VspI ATTAAT 2 cut(s) 72, 1122
XapI RAATTY 1 cut(s) 263
XbaI TCTAGA 1 cut(s) 640
XceI RCATGY 1 cut(s) 1035
XmiI GTMKAC 2 cut(s) 554, 1211
XspI CTAG 2 cut(s) 153, 641
ZrmI AGTACT 1 cut(s) 157
Zsp2I ATGCAT 1 cut(s) 1583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.