Rh4BG389400

PQQ-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0001008
Physical Location & Seq
Forward (+)
54282998 .. 54284885
1888 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG389400.1

Sequence Viewer

Length: 1515 bp
ATGGTTTCCATACGAAATCCGAAATGTCATAGCACCGTAAACATGCTAGTTATGTGCTTATGTTTATTTACACTTCTTGATACAACGTTTGCAATTTGGCTCAATCACGGAGGTGACAATAGTAACAGAAGGTATGCTAATGGGGAATTGCTCATCAACCCAAGGACGGTGTTAAAAATGCAACAAAAATGGTCGTTTTTCGCCGGTAAAGACATAACTGCAACCCCTGCAGTGACTGATGGAAGGGTCTGTTTCCCATCATGGAATGGATTTCTGTACGCGGTGAATGCATTTACCGGCGCGTTGATATGGAAGCAGAATCTTAGTCAGTTAACTGGACTAAATGGCACAGGAGTCGTTGTGAATCGATCGAACGGGAGGCTTGTCTGGTCAACTCAACTAGACCCACGCCCTCGAACTATGATCACGATGTCTGGCACCGTACTCCTAGGGTCATTTTATGTAGGGGTGTCATCTCTGGAAGAAGGCTTACCAGCTTCTCAGTGTTGCAGTTTCCGTGGCAGTGTAGCAAAGCTAGATGTTAGAACTGGTGCAGTCTTATGGCGGACTTATATGCTACGGGACAACGGTGGTAGATTGAACGGTTATTCGGGAGCTGCAGTATGGGGAAGCAGCCCTGCCATTGATGTGTTGCGGAGACATGTCTATGTAGCAACTGGGAACCTCTACACAGCTCCACCTGAGGTGCTTCAATGTCAAGAGAAACAGAATAACCAGACAGGAACGCCTACACAGCCTGACCAGTGCACCGGTCCAGATATCCACTTCAATTCAATTATAGCATTGGATCTTGTTACCGGGAGGATTGTATGGTCTAGGCAGCTAGGTGGTTACGACATTTTCTACTTCGCTTGTTTGATACCGAACAACCCCGACTGCCCACCAGGACCTAATGATGATGCCGACTTTGGAGAGGCACCAATGCTGCTTACCATACACCCTAATGGAACAAGACGTGACGTCGTGGTGGCCGTGCAGAAGAGTGGGTTTGCTTGGGCTCTAGACCGTGACAATGGAAACATTGTTTGGTTCAAGTTGGCTGGACCAGGTAGCAATGAAGGAGGAGGGATATGGGGTGCAGCCACAGATGGGAGAAGGATGTACACAAACATCGCCAACGGCCAACGACAGATGTTCCCTCTAGCACCATCAAACCTAACAACAACGGCTGGAGCATGGGTGACTCTTGATGCAGATACCGGGAAGATTTTGTGGTCAACAGCAAACCCAAGCAATGACACTGCCCAGGCACCTGTTACAGTTGCTAACGGTGTTGTTTTTGCTGGGTCTGTAGCTTCGAATGGTCCCATATATGCCATGGATGCAACCACTGGAAAGATTTTGTGGTCAATCAATACTGGTTCTACAATATACGGGGGTGTCGCAGCAAGCTATGGGTGCATTTATCTAGGAAATGGGTACACAGTTGGCCTGGCCAAGTTTCACCCTACTTGGACAGGTGGTACTTCACTGTTTGCTTTCTGCGTTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PQQ PQQ_2

Protein Analysis

504

Amino Acids

54.19

Weight (kDa)

8.55

Isoelectric Point (pI)

27.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PQQ_2 PF13360 64 - 279 3.6e-10 Outer membrane protein assembly factor BamB
PQQ PF01011 142 - 350 1.6e-11 Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain
PQQ_2 PF13360 340 - 460 1.8e-08 Outer membrane protein assembly factor BamB
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 984
AccB1I GGYRCC 3 cut(s) 437, 937, 1270
AccII CGCG 2 cut(s) 281, 302
AciI CCGC 3 cut(s) 281, 565, 655
AclI AACGTT 1 cut(s) 86
AclWI GGATC 1 cut(s) 816
AcoI YGGCCR 3 cut(s) 990, 1141, 1455
AcyI GRCGYC 1 cut(s) 981
AfaI GTAC 5 cut(s) 278, 444, 1124, 1442, 1486
AfiI CCNNNNNNNGG 2 cut(s) 166, 1110
AflIII ACRYGT 1 cut(s) 661
AgeI ACCGGT 1 cut(s) 770
AgsI TTSAA 5 cut(s) 601, 713, 790, 795, 1054
AhdI GACNNNNNGTC 1 cut(s) 980
AjiI CACGTC 1 cut(s) 977
AjnI CCWGG 4 cut(s) 904, 1066, 1266, 1452
AjuI GAANNNNNNNTTGG 2 cut(s) 1030, 1062
AleI CACNNNNGTG 1 cut(s) 111
AluBI AGCT 7 cut(s) 497, 535, 617, 695, 844, 1316, 1413
AluI AGCT 7 cut(s) 497, 535, 617, 695, 844, 1316, 1413
Alw21I GWGCWC 1 cut(s) 770
Alw26I GTCTC 1 cut(s) 652
Alw44I GTGCAC 1 cut(s) 766
AlwI GGATC 1 cut(s) 816
AlwNI CAGNNNCTG 1 cut(s) 236
AoxI GGCC 4 cut(s) 990, 1141, 1450, 1455
ApaLI GTGCAC 1 cut(s) 766
ApeKI GCWGC 6 cut(s) 617, 633, 841, 946, 1100, 1406
AsiGI ACCGGT 1 cut(s) 770
AspA2I CCTAGG 1 cut(s) 448
AspLEI GCGC 1 cut(s) 302
AspS9I GGNCC 4 cut(s) 773, 908, 1064, 1325
AsuC2I CCSGG 2 cut(s) 820, 1222
AsuHPI GGTGA 4 cut(s) 125, 295, 1213, 1457
AsuII TTCGAA 1 cut(s) 1319
AvaII GGWCC 4 cut(s) 773, 908, 1064, 1325
AvrII CCTAGG 1 cut(s) 448
AxyI CCTNAGG 1 cut(s) 702
BaeGI GKGCMC 1 cut(s) 770
BalI TGGCCA 1 cut(s) 1457
BanI GGYRCC 3 cut(s) 437, 937, 1270
BanII GRGCYC 1 cut(s) 1021
BarI GAAGNNNNNNTAC 2 cut(s) 474, 506
Bbv12I GWGCWC 1 cut(s) 770
BbvI GCAGC 6 cut(s) 604, 645, 853, 933, 1112, 1418
BccI CCATC 4 cut(s) 233, 265, 1103, 1177
BceAI ACGGC 3 cut(s) 977, 1156, 1203
BcgI CGANNNNNNTGC 2 cut(s) 337, 371
BciT130I CCWGG 4 cut(s) 906, 1068, 1268, 1454
BclI TGATCA 1 cut(s) 423
BcnI CCSGG 2 cut(s) 820, 1222
BcoDI GTCTC 1 cut(s) 652
BfaI CTAG 9 cut(s) 47, 401, 449, 536, 837, 845, 1022, 1163, 1430
BfmI CTRYAG 3 cut(s) 228, 618, 1311
BisI GCNGC 6 cut(s) 618, 634, 842, 947, 1101, 1407
BlnI CCTAGG 1 cut(s) 448
BlsI GCNGC 6 cut(s) 619, 635, 843, 948, 1102, 1408
Bme1390I CCNGG 6 cut(s) 820, 906, 1068, 1222, 1268, 1454
Bme18I GGWCC 4 cut(s) 773, 908, 1064, 1325
BmeRI GACNNNNNGTC 1 cut(s) 980
BmgBI CACGTC 1 cut(s) 977
BmgT120I GGNCC 4 cut(s) 773, 908, 1064, 1325
BmiI GGNNCC 5 cut(s) 439, 683, 939, 1272, 1327
BmrFI CCNGG 6 cut(s) 820, 906, 1068, 1222, 1268, 1454
BmrI ACTGGG 1 cut(s) 687
BmsI GCATC 3 cut(s) 910, 1201, 1333
BmuI ACTGGG 1 cut(s) 687
BpmI CTGGAG 1 cut(s) 1212
Bpu14I TTCGAA 1 cut(s) 1319
BpuMI CCSGG 2 cut(s) 820, 1222
Bsa29I ATCGAT 1 cut(s) 367
BsaHI GRCGYC 1 cut(s) 981
BsaJI CCNNGG 5 cut(s) 161, 448, 517, 1266, 1338
BsaWI WCCGGW 1 cut(s) 770
BsaXI ACNNNNNCTCC 6 cut(s) 345, 375, 606, 636, 1185, 1215
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 1110
Bse118I RCCGGY 3 cut(s) 203, 296, 770
Bse1I ACTGG 6 cut(s) 340, 553, 682, 763, 1357, 1384
Bse21I CCTNAGG 1 cut(s) 702
Bse3DI GCAATG 2 cut(s) 1081, 1261
BseBI CCWGG 4 cut(s) 906, 1068, 1268, 1454
BseCI ATCGAT 1 cut(s) 367
BseDI CCNNGG 5 cut(s) 161, 448, 517, 1266, 1338
BseGI GGATG 2 cut(s) 1125, 1348
BseLI CCNNNNNNNGG 2 cut(s) 166, 1110
BseMI GCAATG 2 cut(s) 1081, 1261
BseMII CTCAG 2 cut(s) 515, 693
BseNI ACTGG 6 cut(s) 340, 553, 682, 763, 1357, 1384
BseRI GAGGAG 1 cut(s) 1098
BseSI GKGCMC 1 cut(s) 770
BseXI GCAGC 6 cut(s) 604, 645, 853, 933, 1112, 1418
BseYI CCCAGC 1 cut(s) 1304
BsgI GTGCAG 3 cut(s) 573, 1016, 1119
Bsh1236I CGCG 2 cut(s) 281, 302
Bsh1285I CGRYCG 1 cut(s) 371
BshFI GGCC 4 cut(s) 992, 1143, 1452, 1457
BshNI GGYRCC 3 cut(s) 437, 937, 1270
BshTI ACCGGT 1 cut(s) 770
BshVI ATCGAT 1 cut(s) 367
BsiEI CGRYCG 1 cut(s) 371
BsiHKAI GWGCWC 1 cut(s) 770
BsiSI CCGG 5 cut(s) 204, 297, 771, 819, 1221
BslFI GGGAC 2 cut(s) 596, 1311
BslI CCNNNNNNNGG 2 cut(s) 166, 1110
BsmAI GTCTC 1 cut(s) 652
BsmFI GGGAC 2 cut(s) 596, 1311
BsmI GAATGC 1 cut(s) 292
BsnI GGCC 4 cut(s) 992, 1143, 1452, 1457
Bsp119I TTCGAA 1 cut(s) 1319
Bsp1286I GDGCHC 2 cut(s) 770, 1021
Bsp1407I TGTACA 1 cut(s) 1122
Bsp143I GATC 3 cut(s) 368, 423, 808
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 3 cut(s) 281, 565, 655
BspANI GGCC 4 cut(s) 992, 1143, 1452, 1457
BspCNI CTCAG 2 cut(s) 514, 694
BspDI ATCGAT 1 cut(s) 367
BspFNI CGCG 2 cut(s) 281, 302
BspLI GGNNCC 5 cut(s) 439, 683, 939, 1272, 1327
BspMAI CTGCAG 2 cut(s) 232, 622
BspPI GGATC 1 cut(s) 816
BspT104I TTCGAA 1 cut(s) 1319
BspT107I GGYRCC 3 cut(s) 437, 937, 1270
BsrDI GCAATG 2 cut(s) 1081, 1261
BsrFI RCCGGY 3 cut(s) 203, 296, 770
BsrGI TGTACA 1 cut(s) 1122
BsrI ACTGG 6 cut(s) 340, 553, 682, 763, 1357, 1384
BssAI RCCGGY 3 cut(s) 203, 296, 770
BssECI CCNNGG 5 cut(s) 161, 448, 517, 1266, 1338
BssMI GATC 3 cut(s) 368, 423, 808
BssNI GRCGYC 1 cut(s) 981
BssT1I CCWWGG 3 cut(s) 161, 448, 1338
Bst2UI CCWGG 4 cut(s) 906, 1068, 1268, 1454
Bst6I CTCTTC 1 cut(s) 995
BstACI GRCGYC 1 cut(s) 981
BstAPI GCANNNNNTGC 1 cut(s) 227
BstAUI TGTACA 1 cut(s) 1122
BstBI TTCGAA 1 cut(s) 1319
BstC8I GCNNGC 1 cut(s) 1411
BstDEI CTNAG 3 cut(s) 323, 501, 702
BstDSI CCRYGG 2 cut(s) 517, 1338
BstF5I GGATG 2 cut(s) 1125, 1348
BstFNI CGCG 2 cut(s) 281, 302
BstHHI GCGC 1 cut(s) 302
BstKTI GATC 3 cut(s) 371, 426, 811
BstMAI GTCTC 1 cut(s) 652
BstMBI GATC 3 cut(s) 368, 423, 808
BstMCI CGRYCG 1 cut(s) 371
BstMWI GCNNNNNNNGC 5 cut(s) 227, 287, 754, 1343, 1419
BstNI CCWGG 4 cut(s) 906, 1068, 1268, 1454
BstNSI RCATGY 2 cut(s) 46, 665
BstSCI CCNGG 6 cut(s) 818, 904, 1066, 1220, 1266, 1452
BstSFI CTRYAG 3 cut(s) 228, 618, 1311
BstSLI GKGCMC 1 cut(s) 770
BstUI CGCG 2 cut(s) 281, 302
BstV1I GCAGC 6 cut(s) 604, 645, 853, 933, 1112, 1418
BstX2I RGATCY 1 cut(s) 808
BstYI RGATCY 1 cut(s) 808
Bsu15I ATCGAT 1 cut(s) 367
Bsu36I CCTNAGG 1 cut(s) 702
BsuRI GGCC 4 cut(s) 992, 1143, 1452, 1457
BsuTUI ATCGAT 1 cut(s) 367
BtgI CCRYGG 2 cut(s) 517, 1338
BtgZI GCGATG 1 cut(s) 1117
BtrI CACGTC 1 cut(s) 977
BtsCI GGATG 2 cut(s) 1125, 1348
BtsI GCAGTG 3 cut(s) 237, 529, 1260
BtsIMutI CAGTG 7 cut(s) 237, 509, 529, 770, 1260, 1350, 1490
Cac8I GCNNGC 1 cut(s) 1411
CaiI CAGNNNCTG 1 cut(s) 236
CfoI GCGC 1 cut(s) 302
Cfr10I RCCGGY 3 cut(s) 203, 296, 770
Cfr13I GGNCC 4 cut(s) 773, 908, 1064, 1325
ClaI ATCGAT 1 cut(s) 367
CsiI ACCWGGT 1 cut(s) 1066
Csp6I GTAC 5 cut(s) 277, 443, 1123, 1441, 1485
CspAI ACCGGT 1 cut(s) 770
CviAII CATG 5 cut(s) 43, 261, 662, 1197, 1339
CviQI GTAC 5 cut(s) 277, 443, 1123, 1441, 1485
DdeI CTNAG 3 cut(s) 323, 501, 702
DpnI GATC 3 cut(s) 370, 425, 810
DpnII GATC 3 cut(s) 368, 423, 808
DriI GACNNNNNGTC 1 cut(s) 980
EaeI YGGCCR 3 cut(s) 990, 1141, 1455
Eam1104I CTCTTC 1 cut(s) 995
Eam1105I GACNNNNNGTC 1 cut(s) 980
EarI CTCTTC 1 cut(s) 995
EciI GGCGGA 1 cut(s) 580
Eco130I CCWWGG 3 cut(s) 161, 448, 1338
Eco24I GRGCYC 1 cut(s) 1021
Eco32I GATATC 1 cut(s) 781
Eco47I GGWCC 4 cut(s) 773, 908, 1064, 1325
Eco81I CCTNAGG 1 cut(s) 702
EcoO109I RGGNCCY 1 cut(s) 908
EcoRII CCWGG 4 cut(s) 904, 1066, 1266, 1452
EcoRV GATATC 1 cut(s) 781
EcoT14I CCWWGG 3 cut(s) 161, 448, 1338
EcoT22I ATGCAT 1 cut(s) 292
EcoT38I GRGCYC 1 cut(s) 1021
ErhI CCWWGG 3 cut(s) 161, 448, 1338
FaeI CATG 5 cut(s) 46, 264, 665, 1200, 1342
FaqI GGGAC 2 cut(s) 596, 1311
FatI CATG 5 cut(s) 42, 260, 661, 1196, 1338
FbaI TGATCA 1 cut(s) 423
Fnu4HI GCNGC 6 cut(s) 618, 634, 842, 947, 1101, 1407
FokI GGATG 2 cut(s) 1132, 1355
FriOI GRGCYC 1 cut(s) 1021
Fsp4HI GCNGC 6 cut(s) 618, 634, 842, 947, 1101, 1407
FspBI CTAG 9 cut(s) 47, 401, 449, 536, 837, 845, 1022, 1163, 1430
GlaI GCGC 1 cut(s) 301
GluI GCNGC 6 cut(s) 618, 634, 842, 947, 1101, 1407
GsaI CCCAGC 1 cut(s) 1308
GsuI CTGGAG 1 cut(s) 1212
HaeIII GGCC 4 cut(s) 992, 1143, 1452, 1457
HapII CCGG 5 cut(s) 204, 297, 771, 819, 1221
HhaI GCGC 1 cut(s) 302
Hin1I GRCGYC 1 cut(s) 981
Hin1II CATG 5 cut(s) 46, 264, 665, 1200, 1342
Hin6I GCGC 1 cut(s) 300
HinP1I GCGC 1 cut(s) 300
HincII GTYRAC 3 cut(s) 333, 393, 1239
HindII GTYRAC 3 cut(s) 333, 393, 1239
HinfI GANTC 4 cut(s) 319, 354, 364, 1204
HpaI GTTAAC 1 cut(s) 333
HpaII CCGG 5 cut(s) 204, 297, 771, 819, 1221
HphI GGTGA 4 cut(s) 125, 295, 1213, 1457
Hpy166II GTNNAC 7 cut(s) 40, 333, 393, 768, 1125, 1239, 1443
Hpy188I TCNGA 1 cut(s) 21
Hpy188III TCNNGA 8 cut(s) 77, 427, 479, 612, 719, 776, 1022, 1208
Hpy8I GTNNAC 7 cut(s) 40, 333, 393, 768, 1125, 1239, 1443
Hpy99I CGWCG 1 cut(s) 986
HpyAV CCTTC 5 cut(s) 123, 237, 479, 1073, 1110
HpyCH4IV ACGT 3 cut(s) 86, 976, 981
HpyF10VI GCNNNNNNNGC 5 cut(s) 227, 287, 754, 1343, 1419
HpyF3I CTNAG 3 cut(s) 323, 501, 702
HpySE526I ACGT 3 cut(s) 86, 976, 981
Hsp92I GRCGYC 1 cut(s) 981
Hsp92II CATG 5 cut(s) 46, 264, 665, 1200, 1342
HspAI GCGC 1 cut(s) 300
Ksp22I TGATCA 1 cut(s) 423
KspAI GTTAAC 1 cut(s) 333
Kzo9I GATC 3 cut(s) 368, 423, 808
LmnI GCTCC 3 cut(s) 614, 700, 1193
Lsp1109I GCAGC 6 cut(s) 604, 645, 853, 933, 1112, 1418
LweI GCATC 3 cut(s) 910, 1201, 1333
MabI ACCWGGT 1 cut(s) 1066
MaeI CTAG 9 cut(s) 47, 401, 449, 536, 837, 845, 1022, 1163, 1430
MaeII ACGT 3 cut(s) 86, 976, 981
MaeIII GTNAC 9 cut(s) 113, 122, 232, 814, 851, 977, 1028, 1201, 1276
MalI GATC 3 cut(s) 370, 425, 810
MboI GATC 3 cut(s) 368, 423, 808
MboII GAAGA 3 cut(s) 494, 1012, 1237
MflI RGATCY 1 cut(s) 808
MhlI GDGCHC 2 cut(s) 770, 1021
MlsI TGGCCA 1 cut(s) 1457
MluCI AATT 4 cut(s) 93, 146, 790, 795
MluNI TGGCCA 1 cut(s) 1457
MlyI GAGTC 2 cut(s) 363, 1198
Mox20I TGGCCA 1 cut(s) 1457
Mph1103I ATGCAT 1 cut(s) 292
MscI TGGCCA 1 cut(s) 1457
MseI TTAA 2 cut(s) 173, 332
MslI CAYNNNNRTG 4 cut(s) 111, 647, 666, 963
Msp20I TGGCCA 1 cut(s) 1457
MspI CCGG 5 cut(s) 204, 297, 771, 819, 1221
MspR9I CCNGG 6 cut(s) 820, 906, 1068, 1222, 1268, 1454
Mva1269I GAATGC 1 cut(s) 292
MvaI CCWGG 4 cut(s) 906, 1068, 1268, 1454
MvnI CGCG 2 cut(s) 281, 302
MwoI GCNNNNNNNGC 5 cut(s) 227, 287, 754, 1343, 1419
NciI CCSGG 2 cut(s) 820, 1222
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 3 cut(s) 368, 423, 808
NlaIII CATG 5 cut(s) 46, 264, 665, 1200, 1342
NlaIV GGNNCC 5 cut(s) 439, 683, 939, 1272, 1327
NmuCI GTSAC 5 cut(s) 113, 232, 977, 1028, 1201
NsiI ATGCAT 1 cut(s) 292
NspI RCATGY 2 cut(s) 46, 665
NspV TTCGAA 1 cut(s) 1319
OliI CACNNNNGTG 1 cut(s) 111
PciI ACATGT 1 cut(s) 661
PcsI WCGNNNNNNNCGW 1 cut(s) 990
PctI GAATGC 1 cut(s) 292
PfeI GAWTC 2 cut(s) 319, 364
PinAI ACCGGT 1 cut(s) 770
PkrI GCNGC 6 cut(s) 619, 635, 843, 948, 1102, 1408
Ple19I CGATCG 1 cut(s) 371
PleI GAGTC 2 cut(s) 362, 1198
PpsI GAGTC 2 cut(s) 362, 1198
PpuMI RGGWCCY 1 cut(s) 908
PscI ACATGT 1 cut(s) 661
Psp1406I AACGTT 1 cut(s) 86
Psp5II RGGWCCY 1 cut(s) 908
Psp6I CCWGG 4 cut(s) 904, 1066, 1266, 1452
PspFI CCCAGC 1 cut(s) 1304
PspGI CCWGG 4 cut(s) 904, 1066, 1266, 1452
PspN4I GGNNCC 5 cut(s) 439, 683, 939, 1272, 1327
PspPI GGNCC 4 cut(s) 773, 908, 1064, 1325
PspPPI RGGWCCY 1 cut(s) 908
PstI CTGCAG 2 cut(s) 232, 622
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 1 cut(s) 808
PvuI CGATCG 1 cut(s) 371
RsaI GTAC 5 cut(s) 278, 444, 1124, 1442, 1486
RsaNI GTAC 5 cut(s) 277, 443, 1123, 1441, 1485
RseI CAYNNNNRTG 4 cut(s) 111, 647, 666, 963
SaqAI TTAA 2 cut(s) 173, 332
SatI GCNGC 6 cut(s) 618, 634, 842, 947, 1101, 1407
Sau3AI GATC 3 cut(s) 368, 423, 808
Sau96I GGNCC 4 cut(s) 773, 908, 1064, 1325
SchI GAGTC 2 cut(s) 363, 1198
ScrFI CCNGG 6 cut(s) 820, 906, 1068, 1222, 1268, 1454
SduI GDGCHC 2 cut(s) 770, 1021
SexAI ACCWGGT 1 cut(s) 1066
SfaNI GCATC 3 cut(s) 910, 1201, 1333
SfcI CTRYAG 3 cut(s) 228, 618, 1311
SfuI TTCGAA 1 cut(s) 1319
SinI GGWCC 4 cut(s) 773, 908, 1064, 1325
SmiMI CAYNNNNRTG 4 cut(s) 111, 647, 666, 963
Sse9I AATT 4 cut(s) 93, 146, 790, 795
SsiI CCGC 3 cut(s) 281, 565, 655
SspMI CTAG 9 cut(s) 47, 401, 449, 536, 837, 845, 1022, 1163, 1430
StyD4I CCNGG 6 cut(s) 818, 904, 1066, 1220, 1266, 1452
StyI CCWWGG 3 cut(s) 161, 448, 1338
TaiI ACGT 3 cut(s) 89, 979, 984
TaqI TCGA 4 cut(s) 367, 371, 415, 1319
TasI AATT 4 cut(s) 93, 146, 790, 795
TatI WGTACW 1 cut(s) 1122
TfiI GAWTC 2 cut(s) 319, 364
Tru1I TTAA 2 cut(s) 173, 332
Tru9I TTAA 2 cut(s) 173, 332
TscAI CASTG 7 cut(s) 237, 509, 529, 770, 1267, 1357, 1497
TseFI GTSAC 5 cut(s) 113, 232, 977, 1028, 1201
TseI GCWGC 6 cut(s) 617, 633, 841, 946, 1100, 1406
Tsp45I GTSAC 5 cut(s) 113, 232, 977, 1028, 1201
TspDTI ATGAA 1 cut(s) 1092
TspGWI ACGGA 2 cut(s) 123, 506
TspRI CASTG 7 cut(s) 237, 509, 529, 770, 1267, 1357, 1497
VneI GTGCAC 1 cut(s) 766
VpaK11BI GGWCC 4 cut(s) 773, 908, 1064, 1325
XbaI TCTAGA 1 cut(s) 1021
XceI RCATGY 2 cut(s) 46, 665
XcmI CCANNNNNNNNNTGG 1 cut(s) 1336
XmaJI CCTAGG 1 cut(s) 448
XspI CTAG 9 cut(s) 47, 401, 449, 536, 837, 845, 1022, 1163, 1430
ZraI GACGTC 1 cut(s) 982
Zsp2I ATGCAT 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.