RchiOBHm_Chr4g0440311

PQQ-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0001008
Physical Location & Seq
Forward (+)
62489238 .. 62491073
1836 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40828

Sequence Viewer

Length: 1599 bp
ATGTCCTTATGTTTATTTACACTTCTTGATACAACGTTTGCAATTTGGCTCAATCACGGAGGTGACAATAGTAACAGAAGGTATGCTAATGGGGAATTGCTCATCACCCCAAGGACGGTGTTAAAAATGCAACAAAAATGGTCATTTTTCGCCGGTAAAGACATAACTGCAACCCCTGCAGTGGCTGATGGAAGGGTCTATTTCCCATCATGGAATGGATTTCTGTACGCGGTGAATGCATTTACCGGCGCTTTGATATGGAAGCAGAATCTTAGTCAGTTAACTGGACTAAATGGCACAGGAGTCGTTGTGAATGTGACTGTGTCGAGATCAACCCCAACAATAGCTGGTAACCTCTTGATCGTTGGTATTTATGGACCTGCTGTTGTGATTGCTGTGGAGCGATCGAACGGGAGGCTTGTCTGGTCAAGTCAACTAGACCCACGCCCTCGAACTATGATCACGATGTCTGGCACCGTACTCCTAGGGGATTCATTGCTAGCTGCTACCATGGAACTCATCTTACATTTTTGCAGGTCATTTTATGTAGGGGTGTCATCTCTGGAAGAAGGCTTACCAGCTTCTCAGTGTTGCAGTTTCCGTGGCAGTGTAGCAAAGCTAGATGTTAGAACTGGTGCAGTCTTATGGCGGACTTACATGCTACCGGACAATGGTGGTAGATTGAACGGTTATTCGGGAGCTGCAGTATGGGGAAGCAGCCCTGCCATTGATGTGTTGCGGAGACATGTCTATGTATCAACTGGGAACCTCTACACAGCTCCACCTGAGGTGCTTCAATGTCAAGAGAAACAGAATAACCAGACAGTAACGCCTACACAGCCTGACCAGTGCACCGGTCCAGATATCCACTTCAATTCAATTATAGCATTGGATCTTGTTACCGGGAGGATTGTATGGTCTAGGCAGCTAGGTGGTTACGACATTTTCTACTTCGCTTGTTTGATACCGAACAACCCCGACTGCCCACCAGGACCTAATGATGATGCCGACTTTGGAGAGGCACCAATGCTGCTTACCATACACCCTAATGGAACAAGACGTGACGTCGTGGTGGCCGTGCAGAAGAGTGGGTTTGCTTGGGCTCTAGACCGTGACAATGGAAACATTGTTTGGTTCAAGTTGGCTGGACCAGGTAGCAATGAAGGAGGAGGGATATGGGGTGCAGCCACAGATGGGAGAAGGGTGTACACAAACATCGCCAACGGCCAACGACAGATGTTCCCTCTAGCACCATCAAACCTAACAACAACGGCTGGAGCATGGGTGGGTCTTGATGCAGATACCGGGAAGATTTTGTGGTCAACAGCAAACCCAAGCAATGACACTGCCCAGGCACCTGTTACAGTTGCTAATGGTGTTGTTTTTGCTGGGTCTGTAGCTTCGAATGGTCCCATATATGCCATGGATGCAACCACTGGAAAGATTTTGTGGTCAATCAATACTGGTTCTACAATATATGGGGGTGTCGCAGCAAGCTATGGGTGCATTTATCTAGGAAATGGGTACACAGTTGGCCTGGCCAAGTTTCACCCTACTTGGACAGGTGGTACTTCACTGTTTGCTTTCTGCGTTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PQQ PQQ_2

Protein Analysis

532

Amino Acids

56.89

Weight (kDa)

7.52

Isoelectric Point (pI)

28.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PQQ_2 PF13360 47 - 307 4.5e-15 Outer membrane protein assembly factor BamB
PQQ PF01011 201 - 378 3e-10 Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain
PQQ_2 PF13360 368 - 488 6.2e-09 Outer membrane protein assembly factor BamB
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1068
Acc36I ACCTGC 2 cut(s) 388, 525
AccB1I GGYRCC 3 cut(s) 473, 1021, 1354
AccII CGCG 1 cut(s) 230
AciI CCGC 3 cut(s) 230, 649, 739
AclI AACGTT 1 cut(s) 35
AclWI GGATC 1 cut(s) 900
AcoI YGGCCR 3 cut(s) 1074, 1225, 1539
AcyI GRCGYC 1 cut(s) 1065
AfaI GTAC 5 cut(s) 227, 480, 1208, 1526, 1570
AfiI CCNNNNNNNGG 4 cut(s) 115, 181, 671, 1194
AflIII ACRYGT 1 cut(s) 745
AgeI ACCGGT 1 cut(s) 854
AgsI TTSAA 5 cut(s) 685, 797, 874, 879, 1138
AhdI GACNNNNNGTC 1 cut(s) 1064
AjiI CACGTC 1 cut(s) 1061
AjnI CCWGG 4 cut(s) 988, 1150, 1350, 1536
AjuI GAANNNNNNNTTGG 2 cut(s) 1114, 1146
AleI CACNNNNGTG 1 cut(s) 60
AluBI AGCT 9 cut(s) 347, 503, 581, 619, 701, 779, 928, 1400, 1497
AluI AGCT 9 cut(s) 347, 503, 581, 619, 701, 779, 928, 1400, 1497
Alw21I GWGCWC 1 cut(s) 854
Alw26I GTCTC 1 cut(s) 736
Alw44I GTGCAC 1 cut(s) 850
AlwI GGATC 1 cut(s) 900
AlwNI CAGNNNCTG 1 cut(s) 185
AoxI GGCC 4 cut(s) 1074, 1225, 1534, 1539
ApaLI GTGCAC 1 cut(s) 850
ApeKI GCWGC 7 cut(s) 503, 701, 717, 925, 1030, 1184, 1490
AsiGI ACCGGT 1 cut(s) 854
AspA2I CCTAGG 1 cut(s) 484
AspLEI GCGC 1 cut(s) 251
AspS9I GGNCC 5 cut(s) 377, 857, 992, 1148, 1409
AsuC2I CCSGG 2 cut(s) 904, 1306
AsuHPI GGTGA 4 cut(s) 74, 97, 244, 1541
AsuII TTCGAA 1 cut(s) 1403
AsuNHI GCTAGC 1 cut(s) 499
AvaII GGWCC 5 cut(s) 377, 857, 992, 1148, 1409
AvrII CCTAGG 1 cut(s) 484
AxyI CCTNAGG 1 cut(s) 786
BaeGI GKGCMC 1 cut(s) 854
BalI TGGCCA 1 cut(s) 1541
BanI GGYRCC 3 cut(s) 473, 1021, 1354
BanII GRGCYC 1 cut(s) 1105
BarI GAAGNNNNNNTAC 2 cut(s) 558, 590
Bbv12I GWGCWC 1 cut(s) 854
BbvI GCAGC 7 cut(s) 490, 688, 729, 937, 1017, 1196, 1502
BccI CCATC 4 cut(s) 182, 214, 1187, 1261
BceAI ACGGC 3 cut(s) 1061, 1240, 1287
BcgI CGANNNNNNTGC 2 cut(s) 286, 320
BciT130I CCWGG 4 cut(s) 990, 1152, 1352, 1538
BclI TGATCA 1 cut(s) 459
BcnI CCSGG 2 cut(s) 904, 1306
BcoDI GTCTC 1 cut(s) 736
BfaI CTAG 9 cut(s) 437, 485, 500, 620, 921, 929, 1106, 1247, 1514
BfmI CTRYAG 3 cut(s) 177, 702, 1395
BfoI RGCGCY 1 cut(s) 252
BfuAI ACCTGC 2 cut(s) 388, 525
BisI GCNGC 7 cut(s) 504, 702, 718, 926, 1031, 1185, 1491
BlnI CCTAGG 1 cut(s) 484
BlsI GCNGC 7 cut(s) 505, 703, 719, 927, 1032, 1186, 1492
Bme1390I CCNGG 6 cut(s) 904, 990, 1152, 1306, 1352, 1538
Bme18I GGWCC 5 cut(s) 377, 857, 992, 1148, 1409
BmeRI GACNNNNNGTC 1 cut(s) 1064
BmgBI CACGTC 1 cut(s) 1061
BmgT120I GGNCC 5 cut(s) 377, 857, 992, 1148, 1409
BmiI GGNNCC 5 cut(s) 475, 767, 1023, 1356, 1411
BmrFI CCNGG 6 cut(s) 904, 990, 1152, 1306, 1352, 1538
BmrI ACTGGG 1 cut(s) 771
BmsI GCATC 3 cut(s) 994, 1285, 1417
BmtI GCTAGC 1 cut(s) 503
BmuI ACTGGG 1 cut(s) 771
BpmI CTGGAG 1 cut(s) 1296
Bpu14I TTCGAA 1 cut(s) 1403
BpuMI CCSGG 2 cut(s) 904, 1306
BsaHI GRCGYC 1 cut(s) 1065
BsaJI CCNNGG 6 cut(s) 110, 484, 510, 601, 1350, 1422
BsaWI WCCGGW 2 cut(s) 664, 854
BsaXI ACNNNNNCTCC 6 cut(s) 294, 324, 690, 720, 1269, 1299
Bsc4I CCNNNNNNNGG 4 cut(s) 115, 181, 671, 1194
Bse118I RCCGGY 3 cut(s) 152, 245, 854
Bse1I ACTGG 6 cut(s) 289, 637, 766, 847, 1441, 1468
Bse21I CCTNAGG 1 cut(s) 786
Bse3DI GCAATG 3 cut(s) 494, 1165, 1345
BseBI CCWGG 4 cut(s) 990, 1152, 1352, 1538
BseDI CCNNGG 6 cut(s) 110, 484, 510, 601, 1350, 1422
BseGI GGATG 1 cut(s) 1432
BseLI CCNNNNNNNGG 4 cut(s) 115, 181, 671, 1194
BseMI GCAATG 3 cut(s) 494, 1165, 1345
BseMII CTCAG 2 cut(s) 599, 777
BseNI ACTGG 6 cut(s) 289, 637, 766, 847, 1441, 1468
BseRI GAGGAG 1 cut(s) 1182
BseSI GKGCMC 1 cut(s) 854
BseXI GCAGC 7 cut(s) 490, 688, 729, 937, 1017, 1196, 1502
BseYI CCCAGC 1 cut(s) 1388
BsgI GTGCAG 3 cut(s) 657, 1100, 1203
Bsh1236I CGCG 1 cut(s) 230
Bsh1285I CGRYCG 1 cut(s) 407
BshFI GGCC 4 cut(s) 1076, 1227, 1536, 1541
BshNI GGYRCC 3 cut(s) 473, 1021, 1354
BshTI ACCGGT 1 cut(s) 854
BsiEI CGRYCG 1 cut(s) 407
BsiHKAI GWGCWC 1 cut(s) 854
BsiSI CCGG 6 cut(s) 153, 246, 665, 855, 903, 1305
BslFI GGGAC 1 cut(s) 1395
BslI CCNNNNNNNGG 4 cut(s) 115, 181, 671, 1194
BsmAI GTCTC 1 cut(s) 736
BsmFI GGGAC 1 cut(s) 1395
BsmI GAATGC 1 cut(s) 241
BsnI GGCC 4 cut(s) 1076, 1227, 1536, 1541
Bsp119I TTCGAA 1 cut(s) 1403
Bsp1286I GDGCHC 2 cut(s) 854, 1105
Bsp1407I TGTACA 1 cut(s) 1206
Bsp143I GATC 5 cut(s) 329, 360, 404, 459, 892
Bsp19I CCATGG 2 cut(s) 510, 1422
BspACI CCGC 3 cut(s) 230, 649, 739
BspANI GGCC 4 cut(s) 1076, 1227, 1536, 1541
BspCNI CTCAG 2 cut(s) 598, 778
BspFNI CGCG 1 cut(s) 230
BspLI GGNNCC 5 cut(s) 475, 767, 1023, 1356, 1411
BspMAI CTGCAG 2 cut(s) 181, 706
BspMI ACCTGC 2 cut(s) 388, 525
BspOI GCTAGC 1 cut(s) 503
BspPI GGATC 1 cut(s) 900
BspT104I TTCGAA 1 cut(s) 1403
BspT107I GGYRCC 3 cut(s) 473, 1021, 1354
BsrDI GCAATG 3 cut(s) 494, 1165, 1345
BsrFI RCCGGY 3 cut(s) 152, 245, 854
BsrGI TGTACA 1 cut(s) 1206
BsrI ACTGG 6 cut(s) 289, 637, 766, 847, 1441, 1468
BssAI RCCGGY 3 cut(s) 152, 245, 854
BssECI CCNNGG 6 cut(s) 110, 484, 510, 601, 1350, 1422
BssMI GATC 5 cut(s) 329, 360, 404, 459, 892
BssNI GRCGYC 1 cut(s) 1065
BssT1I CCWWGG 4 cut(s) 110, 484, 510, 1422
Bst2UI CCWGG 4 cut(s) 990, 1152, 1352, 1538
Bst4CI ACNGT 9 cut(s) 118, 322, 478, 689, 826, 1112, 1366, 1531, 1578
Bst6I CTCTTC 1 cut(s) 1079
BstACI GRCGYC 1 cut(s) 1065
BstAPI GCANNNNNTGC 1 cut(s) 176
BstAUI TGTACA 1 cut(s) 1206
BstBI TTCGAA 1 cut(s) 1403
BstC8I GCNNGC 2 cut(s) 501, 1495
BstDEI CTNAG 3 cut(s) 272, 585, 786
BstDSI CCRYGG 3 cut(s) 510, 601, 1422
BstEII GGTNACC 1 cut(s) 350
BstF5I GGATG 1 cut(s) 1432
BstFNI CGCG 1 cut(s) 230
BstH2I RGCGCY 1 cut(s) 252
BstHHI GCGC 1 cut(s) 251
BstKTI GATC 5 cut(s) 332, 363, 407, 462, 895
BstMAI GTCTC 1 cut(s) 736
BstMBI GATC 5 cut(s) 329, 360, 404, 459, 892
BstMCI CGRYCG 1 cut(s) 407
BstMWI GCNNNNNNNGC 5 cut(s) 176, 236, 838, 1427, 1503
BstNI CCWGG 4 cut(s) 990, 1152, 1352, 1538
BstNSI RCATGY 2 cut(s) 661, 749
BstPI GGTNACC 1 cut(s) 350
BstSCI CCNGG 6 cut(s) 902, 988, 1150, 1304, 1350, 1536
BstSFI CTRYAG 3 cut(s) 177, 702, 1395
BstSLI GKGCMC 1 cut(s) 854
BstUI CGCG 1 cut(s) 230
BstV1I GCAGC 7 cut(s) 490, 688, 729, 937, 1017, 1196, 1502
BstX2I RGATCY 1 cut(s) 892
BstYI RGATCY 1 cut(s) 892
Bsu36I CCTNAGG 1 cut(s) 786
BsuRI GGCC 4 cut(s) 1076, 1227, 1536, 1541
BtgI CCRYGG 3 cut(s) 510, 601, 1422
BtgZI GCGATG 1 cut(s) 1201
BtrI CACGTC 1 cut(s) 1061
BtsCI GGATG 1 cut(s) 1432
BtsI GCAGTG 3 cut(s) 186, 613, 1344
BtsIMutI CAGTG 7 cut(s) 186, 593, 613, 854, 1344, 1434, 1574
BveI ACCTGC 2 cut(s) 388, 525
Cac8I GCNNGC 2 cut(s) 501, 1495
CaiI CAGNNNCTG 1 cut(s) 185
CfoI GCGC 1 cut(s) 251
Cfr10I RCCGGY 3 cut(s) 152, 245, 854
Cfr13I GGNCC 5 cut(s) 377, 857, 992, 1148, 1409
CsiI ACCWGGT 1 cut(s) 1150
Csp6I GTAC 5 cut(s) 226, 479, 1207, 1525, 1569
CspAI ACCGGT 1 cut(s) 854
CviAII CATG 6 cut(s) 210, 511, 658, 746, 1281, 1423
CviQI GTAC 5 cut(s) 226, 479, 1207, 1525, 1569
DdeI CTNAG 3 cut(s) 272, 585, 786
DpnI GATC 5 cut(s) 331, 362, 406, 461, 894
DpnII GATC 5 cut(s) 329, 360, 404, 459, 892
DriI GACNNNNNGTC 1 cut(s) 1064
EaeI YGGCCR 3 cut(s) 1074, 1225, 1539
Eam1104I CTCTTC 1 cut(s) 1079
Eam1105I GACNNNNNGTC 1 cut(s) 1064
EarI CTCTTC 1 cut(s) 1079
EciI GGCGGA 1 cut(s) 664
Eco130I CCWWGG 4 cut(s) 110, 484, 510, 1422
Eco24I GRGCYC 1 cut(s) 1105
Eco32I GATATC 1 cut(s) 865
Eco47I GGWCC 5 cut(s) 377, 857, 992, 1148, 1409
Eco81I CCTNAGG 1 cut(s) 786
Eco91I GGTNACC 1 cut(s) 350
EcoO109I RGGNCCY 1 cut(s) 992
EcoO65I GGTNACC 1 cut(s) 350
EcoRII CCWGG 4 cut(s) 988, 1150, 1350, 1536
EcoRV GATATC 1 cut(s) 865
EcoT14I CCWWGG 4 cut(s) 110, 484, 510, 1422
EcoT22I ATGCAT 1 cut(s) 241
EcoT38I GRGCYC 1 cut(s) 1105
ErhI CCWWGG 4 cut(s) 110, 484, 510, 1422
FaeI CATG 6 cut(s) 213, 514, 661, 749, 1284, 1426
FaqI GGGAC 1 cut(s) 1395
FatI CATG 6 cut(s) 209, 510, 657, 745, 1280, 1422
FbaI TGATCA 1 cut(s) 459
Fnu4HI GCNGC 7 cut(s) 504, 702, 718, 926, 1031, 1185, 1491
FokI GGATG 1 cut(s) 1439
FriOI GRGCYC 1 cut(s) 1105
Fsp4HI GCNGC 7 cut(s) 504, 702, 718, 926, 1031, 1185, 1491
FspBI CTAG 9 cut(s) 437, 485, 500, 620, 921, 929, 1106, 1247, 1514
GlaI GCGC 1 cut(s) 250
GluI GCNGC 7 cut(s) 504, 702, 718, 926, 1031, 1185, 1491
GsaI CCCAGC 1 cut(s) 1392
GsuI CTGGAG 1 cut(s) 1296
HaeII RGCGCY 1 cut(s) 252
HaeIII GGCC 4 cut(s) 1076, 1227, 1536, 1541
HapII CCGG 6 cut(s) 153, 246, 665, 855, 903, 1305
HhaI GCGC 1 cut(s) 251
Hin1I GRCGYC 1 cut(s) 1065
Hin1II CATG 6 cut(s) 213, 514, 661, 749, 1284, 1426
Hin6I GCGC 1 cut(s) 249
HinP1I GCGC 1 cut(s) 249
HincII GTYRAC 3 cut(s) 282, 434, 1323
HindII GTYRAC 3 cut(s) 282, 434, 1323
HinfI GANTC 3 cut(s) 268, 303, 491
HpaI GTTAAC 1 cut(s) 282
HpaII CCGG 6 cut(s) 153, 246, 665, 855, 903, 1305
HphI GGTGA 4 cut(s) 74, 97, 244, 1541
Hpy166II GTNNAC 7 cut(s) 282, 434, 852, 1207, 1209, 1323, 1527
Hpy8I GTNNAC 7 cut(s) 282, 434, 852, 1207, 1209, 1323, 1527
Hpy99I CGWCG 1 cut(s) 1070
HpyAV CCTTC 5 cut(s) 72, 186, 563, 1157, 1194
HpyCH4III ACNGT 9 cut(s) 118, 322, 478, 689, 826, 1112, 1366, 1531, 1578
HpyCH4IV ACGT 3 cut(s) 35, 1060, 1065
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 236, 838, 1427, 1503
HpyF3I CTNAG 3 cut(s) 272, 585, 786
HpySE526I ACGT 3 cut(s) 35, 1060, 1065
Hsp92I GRCGYC 1 cut(s) 1065
Hsp92II CATG 6 cut(s) 213, 514, 661, 749, 1284, 1426
HspAI GCGC 1 cut(s) 249
Ksp22I TGATCA 1 cut(s) 459
KspAI GTTAAC 1 cut(s) 282
Kzo9I GATC 5 cut(s) 329, 360, 404, 459, 892
LmnI GCTCC 4 cut(s) 400, 698, 784, 1277
Lsp1109I GCAGC 7 cut(s) 490, 688, 729, 937, 1017, 1196, 1502
LweI GCATC 3 cut(s) 994, 1285, 1417
MabI ACCWGGT 1 cut(s) 1150
MaeI CTAG 9 cut(s) 437, 485, 500, 620, 921, 929, 1106, 1247, 1514
MaeII ACGT 3 cut(s) 35, 1060, 1065
MalI GATC 5 cut(s) 331, 362, 406, 461, 894
MboI GATC 5 cut(s) 329, 360, 404, 459, 892
MboII GAAGA 3 cut(s) 578, 1096, 1321
MflI RGATCY 1 cut(s) 892
MhlI GDGCHC 2 cut(s) 854, 1105
MlsI TGGCCA 1 cut(s) 1541
MluCI AATT 4 cut(s) 42, 95, 874, 879
MluNI TGGCCA 1 cut(s) 1541
MlyI GAGTC 1 cut(s) 312
Mox20I TGGCCA 1 cut(s) 1541
Mph1103I ATGCAT 1 cut(s) 241
MscI TGGCCA 1 cut(s) 1541
MseI TTAA 2 cut(s) 122, 281
MslI CAYNNNNRTG 4 cut(s) 60, 731, 750, 1047
Msp20I TGGCCA 1 cut(s) 1541
MspI CCGG 6 cut(s) 153, 246, 665, 855, 903, 1305
MspR9I CCNGG 6 cut(s) 904, 990, 1152, 1306, 1352, 1538
Mva1269I GAATGC 1 cut(s) 241
MvaI CCWGG 4 cut(s) 990, 1152, 1352, 1538
MvnI CGCG 1 cut(s) 230
MwoI GCNNNNNNNGC 5 cut(s) 176, 236, 838, 1427, 1503
NciI CCSGG 2 cut(s) 904, 1306
NcoI CCATGG 2 cut(s) 510, 1422
NdeII GATC 5 cut(s) 329, 360, 404, 459, 892
NheI GCTAGC 1 cut(s) 499
NlaIII CATG 6 cut(s) 213, 514, 661, 749, 1284, 1426
NlaIV GGNNCC 5 cut(s) 475, 767, 1023, 1356, 1411
NmuCI GTSAC 4 cut(s) 62, 316, 1061, 1112
NsiI ATGCAT 1 cut(s) 241
NspI RCATGY 2 cut(s) 661, 749
NspV TTCGAA 1 cut(s) 1403
OliI CACNNNNGTG 1 cut(s) 60
PciI ACATGT 1 cut(s) 745
PcsI WCGNNNNNNNCGW 1 cut(s) 1074
PctI GAATGC 1 cut(s) 241
PfeI GAWTC 2 cut(s) 268, 491
PflFI GACNNNGTC 1 cut(s) 322
PinAI ACCGGT 1 cut(s) 854
PkrI GCNGC 7 cut(s) 505, 703, 719, 927, 1032, 1186, 1492
Ple19I CGATCG 1 cut(s) 407
PleI GAGTC 1 cut(s) 311
PpsI GAGTC 1 cut(s) 311
PpuMI RGGWCCY 1 cut(s) 992
PscI ACATGT 1 cut(s) 745
Psp1406I AACGTT 1 cut(s) 35
Psp5II RGGWCCY 1 cut(s) 992
Psp6I CCWGG 4 cut(s) 988, 1150, 1350, 1536
PspEI GGTNACC 1 cut(s) 350
PspFI CCCAGC 1 cut(s) 1388
PspGI CCWGG 4 cut(s) 988, 1150, 1350, 1536
PspN4I GGNNCC 5 cut(s) 475, 767, 1023, 1356, 1411
PspPI GGNCC 5 cut(s) 377, 857, 992, 1148, 1409
PspPPI RGGWCCY 1 cut(s) 992
PsrI GAACNNNNNNTAC 2 cut(s) 507, 539
PstI CTGCAG 2 cut(s) 181, 706
PstNI CAGNNNCTG 1 cut(s) 185
PsuI RGATCY 1 cut(s) 892
PsyI GACNNNGTC 1 cut(s) 322
PvuI CGATCG 1 cut(s) 407
RsaI GTAC 5 cut(s) 227, 480, 1208, 1526, 1570
RsaNI GTAC 5 cut(s) 226, 479, 1207, 1525, 1569
RseI CAYNNNNRTG 4 cut(s) 60, 731, 750, 1047
SaqAI TTAA 2 cut(s) 122, 281
SatI GCNGC 7 cut(s) 504, 702, 718, 926, 1031, 1185, 1491
Sau3AI GATC 5 cut(s) 329, 360, 404, 459, 892
Sau96I GGNCC 5 cut(s) 377, 857, 992, 1148, 1409
SchI GAGTC 1 cut(s) 312
ScrFI CCNGG 6 cut(s) 904, 990, 1152, 1306, 1352, 1538
SduI GDGCHC 2 cut(s) 854, 1105
SexAI ACCWGGT 1 cut(s) 1150
SfaNI GCATC 3 cut(s) 994, 1285, 1417
SfcI CTRYAG 3 cut(s) 177, 702, 1395
SfuI TTCGAA 1 cut(s) 1403
SinI GGWCC 5 cut(s) 377, 857, 992, 1148, 1409
SmiMI CAYNNNNRTG 4 cut(s) 60, 731, 750, 1047
Sse9I AATT 4 cut(s) 42, 95, 874, 879
SsiI CCGC 3 cut(s) 230, 649, 739
SspMI CTAG 9 cut(s) 437, 485, 500, 620, 921, 929, 1106, 1247, 1514
StyD4I CCNGG 6 cut(s) 902, 988, 1150, 1304, 1350, 1536
StyI CCWWGG 4 cut(s) 110, 484, 510, 1422
TaaI ACNGT 9 cut(s) 118, 322, 478, 689, 826, 1112, 1366, 1531, 1578
TaiI ACGT 3 cut(s) 38, 1063, 1068
TaqI TCGA 4 cut(s) 326, 407, 451, 1403
TasI AATT 4 cut(s) 42, 95, 874, 879
TatI WGTACW 1 cut(s) 1206
TfiI GAWTC 2 cut(s) 268, 491
Tru1I TTAA 2 cut(s) 122, 281
Tru9I TTAA 2 cut(s) 122, 281
TscAI CASTG 7 cut(s) 186, 593, 613, 854, 1351, 1441, 1581
TseFI GTSAC 4 cut(s) 62, 316, 1061, 1112
TseI GCWGC 7 cut(s) 503, 701, 717, 925, 1030, 1184, 1490
Tsp45I GTSAC 4 cut(s) 62, 316, 1061, 1112
TspDTI ATGAA 2 cut(s) 483, 1176
TspGWI ACGGA 2 cut(s) 72, 590
TspRI CASTG 7 cut(s) 186, 593, 613, 854, 1351, 1441, 1581
Tth111I GACNNNGTC 1 cut(s) 322
VneI GTGCAC 1 cut(s) 850
VpaK11BI GGWCC 5 cut(s) 377, 857, 992, 1148, 1409
XbaI TCTAGA 1 cut(s) 1105
XceI RCATGY 2 cut(s) 661, 749
XcmI CCANNNNNNNNNTGG 1 cut(s) 1420
XmaJI CCTAGG 1 cut(s) 484
XspI CTAG 9 cut(s) 437, 485, 500, 620, 921, 929, 1106, 1247, 1514
ZraI GACGTC 1 cut(s) 1066
Zsp2I ATGCAT 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.