Prupe.3G270600_v2.0.a1

PQQ-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001008
Physical Location & Seq
Forward (+)
25174553 .. 25177028
2476 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G270600.1

Sequence Viewer

Length: 1635 bp
ATGGCGCCTGCAGGATCCTCTAACAATCTTTTTCTCCTTTCTCTGTGTATGGTTTGTCTAGTTATAACACCAAGTGCAGGTTTCAATATTTGGCGTTCTGCACAGAAGCACAAGGCTGCAGCCCAAGATTGGCTAAACCATGGAGGAGACTTGTACAACAGAAGATATGCAAACAGGGAGAAGAAGATAAGCCCTGCAACAGTTTCCAATCTCAGTTTGAAGTGGAAATTCTATGCAGGAGGTGACATAACTGTGACACCAGCCATTGTCGACGGCACTCTCTACTTCCCCAGCTGGAACGGCTACCTCTATGCTGTCAAAGCCTCTGATGGTTCCTTGGTTTGGAAGAAGAATGTGCAGAAGCTGACGGGCTTTAAGAACACCGGTTTCATCCTTAATGTCAACTCCACTGTGACCCGATCGACCCCAACTGTTGCTGGTGATCTGCTCATTGTTGGGATCTATGGCCCTGCTTTTGTTATTGCTGTGAAAAGGTCCAATGGAAAGCTGGTCTGGTCTACCAGACTTGACAACCACACCAGAGCTTTTATCACCATGTCCGGAACCTATTACAAGGGGGATTACTATGTTGGAACATCCTCTCTAGAAGAAGGACTCACCATTGAGCAATGCTGCACCTTTCGCGGGAGCGTCTCGAAGTTAGACGTTCGAACAGGAGCAATCTTATGGCAGACCTTCATGCTGCCAGACAATTTTGGCAAGTTTGGAGAGTATGCTGGAGCAGCAATATGGGGAAGCAGCCCTTCCATTGATGTCCCTCGTAACCTTGTCTTCATTGCCACTTCAAACCTGTACTCAGCTCCTCCACGTATAATTGAATGCCAGGAGAAGGAAAACAATCAAACAGTGCCTTCTCACCCAGAGGCCTGCATTGAGCCTGACAACCACTCTGAATCCATTGTAGCTCTTGATTTAGACACTGGCAAAATCAAATGGTATAAGCAGCTAGGAGGCTATGATATATGGTTCGGTGCGTGCCATCGACATTTGGACCCAAGGTGCCCGCCTGGACCTAGCCCAGATGCGGATTTTGGTGAAGCACCAATGATGTTAACCACATATGTCAATGGGACTAAGAAGGATATTGTTGTTGCTGTTCAGAAAAGTGGGTTTGCTTGGGCTCTGGATAGAGATACTGGTAGCTTAGTGTGGTCTACGGAAGCTGGACCAGGAGGGCTAGGAGGAGGAGCAATGTGGGGTGCAGCCACAGACGAAAAAAGGGTCTATACAAACATAGCCAACAGCCAGCACAAGAACTTCACTCTGAAACCATCCCAGAACAGCACAATTGCTGGTGGATGGGTGGCAATGGAGGCTCGCAGTGGCAATATCATATGGTCCACGGCCAATTCCAATGATGCTACTGCTCCTGCAGCTGTTACTGTGGCCAATGGTGTTGTTTTCGGAGGATCCACGCACCGGCAAGGACCGATATATGCAATGAATGCTAAGACAGGAAAGATATTGTGGTCATATGATACAGGAGCCACTGTGTATGGTGGCATTTCAGTGAGCGATGGATGCATTTACCTTGGAAATGGTTACAAGGTGTTTAATGGATTTGTCAACCCCAATTACACTGCAGGAACCTCGCTCTTTGCCTTCTGTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PQQ PQQ_2 PQQ_3

Protein Analysis

545

Amino Acids

58.76

Weight (kDa)

8.72

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 65
Acc36I ACCTGC 1 cut(s) 68
AccB1I GGYRCC 2 cut(s) 4, 1020
AccI GTMKAC 3 cut(s) 270, 518, 1175
AccII CGCG 1 cut(s) 645
AccIII TCCGGA 1 cut(s) 560
AciI CCGC 3 cut(s) 645, 1025, 1046
AclWI GGATC 5 cut(s) 9, 22, 467, 1425, 1438
AcoI YGGCCR 2 cut(s) 1365, 1407
AcsI RAATTY 1 cut(s) 227
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 74
AfaI GTAC 2 cut(s) 155, 815
AfiI CCNNNNNNNGG 7 cut(s) 77, 129, 342, 645, 850, 1045, 1440
AgeI ACCGGT 1 cut(s) 383
AgsI TTSAA 4 cut(s) 85, 220, 807, 839
AjnI CCWGG 3 cut(s) 843, 1027, 1189
Alw26I GTCTC 2 cut(s) 141, 658
AlwI GGATC 5 cut(s) 9, 22, 467, 1425, 1438
AlwNI CAGNNNCTG 1 cut(s) 364
Aor13HI TCCGGA 1 cut(s) 560
AoxI GGCC 4 cut(s) 466, 885, 1365, 1407
ApeKI GCWGC 9 cut(s) 116, 119, 633, 703, 743, 759, 964, 1223, 1394
ApoI RAATTY 1 cut(s) 227
ArsI GACNNNNNNTTYG 2 cut(s) 1227, 1259
AsiGI ACCGGT 1 cut(s) 383
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 7 cut(s) 467, 495, 1012, 1031, 1187, 1359, 1448
AsuHPI GGTGA 6 cut(s) 254, 452, 544, 610, 869, 1067
AsuII TTCGAA 1 cut(s) 670
AvaII GGWCC 6 cut(s) 495, 1012, 1031, 1187, 1359, 1448
BaeGI GKGCMC 1 cut(s) 1025
BalI TGGCCA 1 cut(s) 1409
BamHI GGATCC 2 cut(s) 14, 1430
BanI GGYRCC 2 cut(s) 4, 1020
BanII GRGCYC 1 cut(s) 1144
BbsI GAAGAC 1 cut(s) 784
BbvI GCAGC 9 cut(s) 103, 131, 620, 690, 755, 771, 976, 1235, 1406
BccI CCATC 5 cut(s) 323, 1008, 1300, 1314, 1532
BceAI ACGGC 3 cut(s) 289, 316, 1380
BcgI CGANNNNNNTGC 2 cut(s) 1593, 1627
BciT130I CCWGG 3 cut(s) 845, 1029, 1191
BcoDI GTCTC 2 cut(s) 141, 658
BfaI CTAG 5 cut(s) 59, 605, 968, 1035, 1199
BfmI CTRYAG 4 cut(s) 9, 117, 1392, 1602
BfoI RGCGCY 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 68
BisI GCNGC 9 cut(s) 117, 120, 634, 704, 744, 760, 965, 1224, 1395
BlsI GCNGC 9 cut(s) 118, 121, 635, 705, 745, 761, 966, 1225, 1396
Bme1390I CCNGG 3 cut(s) 845, 1029, 1191
Bme18I GGWCC 6 cut(s) 495, 1012, 1031, 1187, 1359, 1448
BmgT120I GGNCC 7 cut(s) 467, 495, 1012, 1031, 1187, 1359, 1448
BmiI GGNNCC 9 cut(s) 6, 16, 334, 565, 1014, 1022, 1432, 1507, 1609
BmrFI CCNGG 3 cut(s) 845, 1029, 1191
BmsI GCATC 3 cut(s) 1033, 1369, 1532
BpiI GAAGAC 1 cut(s) 784
BpmI CTGGAG 1 cut(s) 759
Bpu14I TTCGAA 1 cut(s) 670
BsaAI YACGTR 1 cut(s) 830
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 5 cut(s) 139, 336, 1016, 1362, 1552
BsaWI WCCGGW 2 cut(s) 383, 560
BsaXI ACNNNNNCTCC 2 cut(s) 1497, 1527
Bsc4I CCNNNNNNNGG 7 cut(s) 77, 129, 342, 645, 850, 1045, 1440
Bse118I RCCGGY 2 cut(s) 383, 1440
Bse1I ACTGG 2 cut(s) 946, 1162
Bse3DI GCAATG 5 cut(s) 635, 795, 1218, 1335, 1467
BseAI TCCGGA 1 cut(s) 560
BseBI CCWGG 3 cut(s) 845, 1029, 1191
BseDI CCNNGG 5 cut(s) 139, 336, 1016, 1362, 1552
BseGI GGATG 5 cut(s) 390, 596, 1292, 1325, 1547
BseLI CCNNNNNNNGG 7 cut(s) 77, 129, 342, 645, 850, 1045, 1440
BseMI GCAATG 5 cut(s) 635, 795, 1218, 1335, 1467
BseMII CTCAG 2 cut(s) 226, 831
BseNI ACTGG 2 cut(s) 946, 1162
BseRI GAGGAG 4 cut(s) 159, 813, 1218, 1221
BseSI GKGCMC 1 cut(s) 1025
BseXI GCAGC 9 cut(s) 103, 131, 620, 690, 755, 771, 976, 1235, 1406
BseYI CCCAGC 1 cut(s) 290
BsgI GTGCAG 5 cut(s) 84, 96, 377, 619, 1242
Bsh1236I CGCG 1 cut(s) 645
Bsh1285I CGRYCG 1 cut(s) 422
BshFI GGCC 4 cut(s) 468, 887, 1367, 1409
BshNI GGYRCC 2 cut(s) 4, 1020
BshTI ACCGGT 1 cut(s) 383
BsiEI CGRYCG 1 cut(s) 422
BsiSI CCGG 3 cut(s) 384, 561, 1441
BslFI GGGAC 2 cut(s) 761, 1105
BslI CCNNNNNNNGG 7 cut(s) 77, 129, 342, 645, 850, 1045, 1440
BsmAI GTCTC 2 cut(s) 141, 658
BsmBI CGTCTC 1 cut(s) 658
BsmFI GGGAC 2 cut(s) 761, 1105
BsmI GAATGC 2 cut(s) 845, 1471
BsnI GGCC 4 cut(s) 468, 887, 1367, 1409
Bsp119I TTCGAA 1 cut(s) 670
Bsp1286I GDGCHC 2 cut(s) 1025, 1144
Bsp13I TCCGGA 1 cut(s) 560
Bsp1407I TGTACA 1 cut(s) 153
Bsp143I GATC 5 cut(s) 14, 419, 442, 459, 1430
Bsp19I CCATGG 1 cut(s) 139
BspACI CCGC 3 cut(s) 645, 1025, 1046
BspANI GGCC 4 cut(s) 468, 887, 1367, 1409
BspCNI CTCAG 2 cut(s) 225, 830
BspEI TCCGGA 1 cut(s) 560
BspFNI CGCG 1 cut(s) 645
BspLI GGNNCC 9 cut(s) 6, 16, 334, 565, 1014, 1022, 1432, 1507, 1609
BspMAI CTGCAG 4 cut(s) 13, 121, 1396, 1606
BspMI ACCTGC 1 cut(s) 68
BspPI GGATC 5 cut(s) 9, 22, 467, 1425, 1438
BspT104I TTCGAA 1 cut(s) 670
BspT107I GGYRCC 2 cut(s) 4, 1020
BsrDI GCAATG 5 cut(s) 635, 795, 1218, 1335, 1467
BsrFI RCCGGY 2 cut(s) 383, 1440
BsrGI TGTACA 1 cut(s) 153
BsrI ACTGG 2 cut(s) 946, 1162
BssAI RCCGGY 2 cut(s) 383, 1440
BssECI CCNNGG 5 cut(s) 139, 336, 1016, 1362, 1552
BssMI GATC 5 cut(s) 14, 419, 442, 459, 1430
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 4 cut(s) 139, 336, 1016, 1552
Bst2UI CCWGG 3 cut(s) 845, 1029, 1191
Bst4CI ACNGT 7 cut(s) 202, 253, 412, 433, 868, 1405, 1513
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 1466
BstAUI TGTACA 1 cut(s) 153
BstBAI YACGTR 1 cut(s) 830
BstBI TTCGAA 1 cut(s) 670
BstC8I GCNNGC 6 cut(s) 9, 889, 997, 1025, 1268, 1339
BstDEI CTNAG 5 cut(s) 212, 817, 1095, 1165, 1470
BstDSI CCRYGG 2 cut(s) 139, 1362
BstF5I GGATG 5 cut(s) 390, 596, 1292, 1325, 1547
BstFNI CGCG 1 cut(s) 645
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 5 cut(s) 17, 422, 445, 462, 1433
BstMAI GTCTC 2 cut(s) 141, 658
BstMBI GATC 5 cut(s) 14, 419, 442, 459, 1430
BstMCI CGRYCG 1 cut(s) 422
BstMWI GCNNNNNNNGC 8 cut(s) 300, 320, 642, 743, 1334, 1394, 1466, 1542
BstNI CCWGG 3 cut(s) 845, 1029, 1191
BstSCI CCNGG 3 cut(s) 843, 1027, 1189
BstSFI CTRYAG 4 cut(s) 9, 117, 1392, 1602
BstSLI GKGCMC 1 cut(s) 1025
BstUI CGCG 1 cut(s) 645
BstV1I GCAGC 9 cut(s) 103, 131, 620, 690, 755, 771, 976, 1235, 1406
BstV2I GAAGAC 1 cut(s) 784
BstX2I RGATCY 3 cut(s) 14, 459, 1430
BstYI RGATCY 3 cut(s) 14, 459, 1430
BsuRI GGCC 4 cut(s) 468, 887, 1367, 1409
BtgI CCRYGG 2 cut(s) 139, 1362
BtgZI GCGATG 1 cut(s) 1551
BtsCI GGATG 5 cut(s) 390, 596, 1292, 1325, 1547
BtsI GCAGTG 2 cut(s) 1348, 1599
BtsIMutI CAGTG 7 cut(s) 408, 873, 939, 1348, 1509, 1536, 1599
BveI ACCTGC 1 cut(s) 68
Cac8I GCNNGC 6 cut(s) 9, 889, 997, 1025, 1268, 1339
CaiI CAGNNNCTG 1 cut(s) 364
CfoI GCGC 1 cut(s) 7
Cfr10I RCCGGY 2 cut(s) 383, 1440
Cfr13I GGNCC 7 cut(s) 467, 495, 1012, 1031, 1187, 1359, 1448
CseI GACGC 1 cut(s) 640
Csp6I GTAC 2 cut(s) 154, 814
CspAI ACCGGT 1 cut(s) 383
CviAII CATG 3 cut(s) 140, 556, 700
CviQI GTAC 2 cut(s) 154, 814
DdeI CTNAG 5 cut(s) 212, 817, 1095, 1165, 1470
DinI GGCGCC 1 cut(s) 6
DpnI GATC 5 cut(s) 16, 421, 444, 461, 1432
DpnII GATC 5 cut(s) 14, 419, 442, 459, 1430
DraIII CACNNNGTG 1 cut(s) 74
EaeI YGGCCR 2 cut(s) 1365, 1407
Eco130I CCWWGG 4 cut(s) 139, 336, 1016, 1552
Eco147I AGGCCT 1 cut(s) 887
Eco24I GRGCYC 1 cut(s) 1144
Eco47I GGWCC 6 cut(s) 495, 1012, 1031, 1187, 1359, 1448
EcoRII CCWGG 3 cut(s) 843, 1027, 1189
EcoT14I CCWWGG 4 cut(s) 139, 336, 1016, 1552
EcoT22I ATGCAT 1 cut(s) 1547
EcoT38I GRGCYC 1 cut(s) 1144
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 4 cut(s) 139, 336, 1016, 1552
Esp3I CGTCTC 1 cut(s) 658
FaeI CATG 3 cut(s) 143, 559, 703
FalI AAGNNNNNCTT 2 cut(s) 748, 780
FaqI GGGAC 2 cut(s) 761, 1105
FatI CATG 3 cut(s) 139, 555, 699
FauI CCCGC 2 cut(s) 638, 1032
FauNDI CATATG 3 cut(s) 1081, 1355, 1495
FblI GTMKAC 3 cut(s) 270, 518, 1175
Fnu4HI GCNGC 9 cut(s) 117, 120, 634, 704, 744, 760, 965, 1224, 1395
FokI GGATG 5 cut(s) 377, 583, 1279, 1332, 1554
FriOI GRGCYC 1 cut(s) 1144
Fsp4HI GCNGC 9 cut(s) 117, 120, 634, 704, 744, 760, 965, 1224, 1395
FspBI CTAG 5 cut(s) 59, 605, 968, 1035, 1199
GlaI GCGC 1 cut(s) 6
GluI GCNGC 9 cut(s) 117, 120, 634, 704, 744, 760, 965, 1224, 1395
GsaI CCCAGC 1 cut(s) 294
GsuI CTGGAG 1 cut(s) 759
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 4 cut(s) 468, 887, 1367, 1409
HapII CCGG 3 cut(s) 384, 561, 1441
HgaI GACGC 1 cut(s) 640
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 3 cut(s) 143, 559, 703
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HincII GTYRAC 4 cut(s) 271, 403, 1074, 1588
HindII GTYRAC 4 cut(s) 271, 403, 1074, 1588
HinfI GANTC 2 cut(s) 615, 914
HpaI GTTAAC 1 cut(s) 1074
HpaII CCGG 3 cut(s) 384, 561, 1441
HphI GGTGA 6 cut(s) 254, 452, 544, 610, 869, 1067
Hpy166II GTNNAC 7 cut(s) 271, 403, 519, 1074, 1176, 1362, 1588
Hpy188I TCNGA 5 cut(s) 328, 913, 1122, 1287, 1427
Hpy188III TCNNGA 5 cut(s) 561, 605, 655, 929, 1145
Hpy8I GTNNAC 7 cut(s) 271, 403, 519, 1074, 1176, 1362, 1588
Hpy99I CGWCG 1 cut(s) 275
HpyAV CCTTC 7 cut(s) 605, 706, 774, 844, 882, 1093, 1633
HpyCH4III ACNGT 7 cut(s) 202, 253, 412, 433, 868, 1405, 1513
HpyCH4IV ACGT 2 cut(s) 666, 829
HpyF10VI GCNNNNNNNGC 8 cut(s) 300, 320, 642, 743, 1334, 1394, 1466, 1542
HpyF3I CTNAG 5 cut(s) 212, 817, 1095, 1165, 1470
HpySE526I ACGT 2 cut(s) 666, 829
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 3 cut(s) 143, 559, 703
HspAI GCGC 1 cut(s) 5
KasI GGCGCC 1 cut(s) 4
Kpn2I TCCGGA 1 cut(s) 560
KspAI GTTAAC 1 cut(s) 1074
Kzo9I GATC 5 cut(s) 14, 419, 442, 459, 1430
LmnI GCTCC 7 cut(s) 648, 677, 740, 826, 1208, 1393, 1505
Lsp1109I GCAGC 9 cut(s) 103, 131, 620, 690, 755, 771, 976, 1235, 1406
LweI GCATC 3 cut(s) 1033, 1369, 1532
MaeI CTAG 5 cut(s) 59, 605, 968, 1035, 1199
MaeII ACGT 2 cut(s) 666, 829
MaeIII GTNAC 6 cut(s) 242, 253, 412, 782, 1399, 1562
MalI GATC 5 cut(s) 16, 421, 444, 461, 1432
MboI GATC 5 cut(s) 14, 419, 442, 459, 1430
MboII GAAGA 7 cut(s) 174, 193, 196, 358, 361, 620, 784
MfeI CAATTG 1 cut(s) 1308
MflI RGATCY 3 cut(s) 14, 459, 1430
MhlI GDGCHC 2 cut(s) 1025, 1144
MlsI TGGCCA 1 cut(s) 1409
MluCI AATT 6 cut(s) 227, 712, 834, 1308, 1369, 1594
MluNI TGGCCA 1 cut(s) 1409
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 609
MmeI TCCRAC 1 cut(s) 571
Mox20I TGGCCA 1 cut(s) 1409
Mph1103I ATGCAT 1 cut(s) 1547
MroI TCCGGA 1 cut(s) 560
MscI TGGCCA 1 cut(s) 1409
MseI TTAA 4 cut(s) 375, 396, 1073, 1575
MslI CAYNNNNRTG 2 cut(s) 251, 1529
Msp20I TGGCCA 1 cut(s) 1409
MspA1I CMGCKG 2 cut(s) 294, 1397
MspI CCGG 3 cut(s) 384, 561, 1441
MspR9I CCNGG 3 cut(s) 845, 1029, 1191
MunI CAATTG 1 cut(s) 1308
Mva1269I GAATGC 2 cut(s) 845, 1471
MvaI CCWGG 3 cut(s) 845, 1029, 1191
MvnI CGCG 1 cut(s) 645
MwoI GCNNNNNNNGC 8 cut(s) 300, 320, 642, 743, 1334, 1394, 1466, 1542
NarI GGCGCC 1 cut(s) 5
NcoI CCATGG 1 cut(s) 139
NdeI CATATG 3 cut(s) 1081, 1355, 1495
NdeII GATC 5 cut(s) 14, 419, 442, 459, 1430
NlaIII CATG 3 cut(s) 143, 559, 703
NlaIV GGNNCC 9 cut(s) 6, 16, 334, 565, 1014, 1022, 1432, 1507, 1609
NmuCI GTSAC 3 cut(s) 242, 253, 412
NsiI ATGCAT 1 cut(s) 1547
NspV TTCGAA 1 cut(s) 670
PceI AGGCCT 1 cut(s) 887
PctI GAATGC 2 cut(s) 845, 1471
PfeI GAWTC 1 cut(s) 914
PinAI ACCGGT 1 cut(s) 383
PkrI GCNGC 9 cut(s) 118, 121, 635, 705, 745, 761, 966, 1225, 1396
Ple19I CGATCG 1 cut(s) 422
PleI GAGTC 1 cut(s) 609
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 609
Ppu21I YACGTR 1 cut(s) 830
PsiI TTATAA 1 cut(s) 65
Psp6I CCWGG 3 cut(s) 843, 1027, 1189
PspFI CCCAGC 1 cut(s) 290
PspGI CCWGG 3 cut(s) 843, 1027, 1189
PspN4I GGNNCC 9 cut(s) 6, 16, 334, 565, 1014, 1022, 1432, 1507, 1609
PspPI GGNCC 7 cut(s) 467, 495, 1012, 1031, 1187, 1359, 1448
PstI CTGCAG 4 cut(s) 13, 121, 1396, 1606
PstNI CAGNNNCTG 1 cut(s) 364
PsuI RGATCY 3 cut(s) 14, 459, 1430
PvuI CGATCG 1 cut(s) 422
PvuII CAGCTG 2 cut(s) 294, 1397
RsaI GTAC 2 cut(s) 155, 815
RsaNI GTAC 2 cut(s) 154, 814
RseI CAYNNNNRTG 2 cut(s) 251, 1529
SalI GTCGAC 1 cut(s) 269
SaqAI TTAA 4 cut(s) 375, 396, 1073, 1575
SatI GCNGC 9 cut(s) 117, 120, 634, 704, 744, 760, 965, 1224, 1395
Sau3AI GATC 5 cut(s) 14, 419, 442, 459, 1430
Sau96I GGNCC 7 cut(s) 467, 495, 1012, 1031, 1187, 1359, 1448
SbfI CCTGCAGG 1 cut(s) 13
SchI GAGTC 1 cut(s) 609
ScrFI CCNGG 3 cut(s) 845, 1029, 1191
SdaI CCTGCAGG 1 cut(s) 13
SduI GDGCHC 2 cut(s) 1025, 1144
SfaNI GCATC 3 cut(s) 1033, 1369, 1532
SfcI CTRYAG 4 cut(s) 9, 117, 1392, 1602
SfoI GGCGCC 1 cut(s) 6
SfuI TTCGAA 1 cut(s) 670
SinI GGWCC 6 cut(s) 495, 1012, 1031, 1187, 1359, 1448
SmiMI CAYNNNNRTG 2 cut(s) 251, 1529
Sse8387I CCTGCAGG 1 cut(s) 13
Sse9I AATT 6 cut(s) 227, 712, 834, 1308, 1369, 1594
SseBI AGGCCT 1 cut(s) 887
SsiI CCGC 3 cut(s) 645, 1025, 1046
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 1 cut(s) 88
SspMI CTAG 5 cut(s) 59, 605, 968, 1035, 1199
StuI AGGCCT 1 cut(s) 887
StyD4I CCNGG 3 cut(s) 843, 1027, 1189
StyI CCWWGG 4 cut(s) 139, 336, 1016, 1552
TaaI ACNGT 7 cut(s) 202, 253, 412, 433, 868, 1405, 1513
TaiI ACGT 2 cut(s) 669, 832
TaqI TCGA 5 cut(s) 270, 422, 656, 670, 1003
TaqII GACCGA 1 cut(s) 1465
TasI AATT 6 cut(s) 227, 712, 834, 1308, 1369, 1594
TatI WGTACW 2 cut(s) 153, 813
TfiI GAWTC 1 cut(s) 914
Tru1I TTAA 4 cut(s) 375, 396, 1073, 1575
Tru9I TTAA 4 cut(s) 375, 396, 1073, 1575
TscAI CASTG 7 cut(s) 415, 873, 946, 1348, 1516, 1536, 1606
TseFI GTSAC 3 cut(s) 242, 253, 412
TseI GCWGC 9 cut(s) 116, 119, 633, 703, 743, 759, 964, 1223, 1394
Tsp45I GTSAC 3 cut(s) 242, 253, 412
TspDTI ATGAA 4 cut(s) 379, 688, 784, 1478
TspGWI ACGGA 1 cut(s) 1193
TspRI CASTG 7 cut(s) 415, 873, 946, 1348, 1516, 1536, 1606
VpaK11BI GGWCC 6 cut(s) 495, 1012, 1031, 1187, 1359, 1448
XapI RAATTY 1 cut(s) 227
XbaI TCTAGA 1 cut(s) 604
XcmI CCANNNNNNNNNTGG 1 cut(s) 505
XmiI GTMKAC 3 cut(s) 270, 518, 1175
XspI CTAG 5 cut(s) 59, 605, 968, 1035, 1199
Zsp2I ATGCAT 1 cut(s) 1547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.