Rw2G050370

PQQ-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0001008
Physical Location & Seq
Forward (+)
78006982 .. 78009401
2420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G050370.1

Sequence Viewer

Length: 1635 bp
ATGGCGCCTTTAGGATTCTCCAATACTTTTTTTCTCCTTTCTCTATGTATGTTCTTTATAGCTATGACACCAAGCTCAGGTTTCAATATTAGGCCTTCTGCAGAGAAATACAAGCCTAGCACTCAAGATTGGCCGAACCATGGAGGAGACTTGTATAACAGAAGATATGCTAACACGGAGAAGAAGATAAGCCCTGCAACAGTTTCCAATCTCAGTGTGAAGTGGAAATTCTCCGTGGGAGGTGACATAACTGTAACACCAACCATTTCTGATGGCATTCTCTACTTCCCTAGCTGGAATGGATATCTCTATGCCGTTAAAGAATCTGATGGATCCCTTGTCTGGAAGAAGAATGTGCAGAAGTTGACAGGCTTCAATAACACTGGCTTCATTCTCAATGTCAACTCCACAGTGACAAGATCAACCCCAACAATCGCCGGTGACCTTCTCATTGTTGGAATCTATGGTCCTGCTTTTGTCATTGCTGTCAAAAGGTCCAATGGGAAGATCGTTTGGTCTACCAGGGTTGACAACCACACCAGAGCCTTTGTCACCATGTCTGGAACATATTACAATGGGGGATACTATGTCGGAACATCCTCTCTAGAAGAAGGCCTCACCATCGATCTGTGCTGCACATTTCGGGGGAGCTTCCTTAAATTAGATGTCCAAACAGGAGCAATCTTGTGGCAGACCTTCATGCTACCAGACAACTTTGGCAAGTTTGGAGAGTACGCTGGTGCAGCAATCTGGGGAAGTAGTCCTTCTATCGATGTGAAGCGCAACCATGTCTACATTGCCACTTCGAACCTGTATTCAGCTCCTCCGCGTATAATTGAATGCCAGGAAAGGGAAAATAATCAAACCATACCTTCACAACCAGACGCCTGCATTGAGCCTGACAACCACTCCGAGTCTATTGTAGCCCTTGATTTAGACACCGGCAAAATCAAATGGTACAAGCAGCTGGGAGGCTATGATATATGGTTCGGTGCATGCCATCGGCATTTGGACCCAAGGTGCCCTCCCGGTCCAAGTCCAGACGCTGATTTTGGGGAAGCACCAATGATGCTTACCACAAAAATTAATGGGACTAAGAGAGATATAGTAGTTGCTGTTCAGAAAAGTGGGTTTGCATGGGCTCTGGACCGAGATACTGGTAGCTTAGTGTGGTCTACGGAAGCTGGACCAGGAGGCTTAGGAGGAGGAGCCATGTGGGGTGCAGCCACTGACGAAAAGAGGGTCTATACTAACATTGCCAACAGCCAACACAAGAACTTCACCCTAAAACCATCCCAAAACACTACAATTGCTGGTGGATGGGTAGCAATGGAGGCTCGCAGTGGCAATATCTTATGGTCCAGGGCCAATGCTAATGATGCTACCGCCCCGGCTGCTGTTACTGTAGCTAATGGTGTTGTTTTTGGTGGTTCTACGTACCGACAAGGACCAATATATGCAATGAACGCTAAGACAGGAAAGATTTTGTGGTCGTATGATACAGGAGCAACTGTGTATGGGGGGATTTCGGTGAGCAATGGATGCATTTACCTCGGAAATGGTTACAAGGTCTTTAATGGATTTGTTAACCCAAATTACACTGCAGGAACCTCGTTCTATGCCTTCTGTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PQQ PQQ_2 PQQ_3

Protein Analysis

544

Amino Acids

59.09

Weight (kDa)

8.65

Isoelectric Point (pI)

35.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_ACSF4 PF13570 67 - 121 5.6e-06 Beta-alanine-activating enzyme, beta-propeller
PQQ_2 PF13360 75 - 319 3.8e-10 Outer membrane protein assembly factor BamB
PQQ PF01011 221 - 394 2.9e-12 Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain
PQQ_2 PF13360 440 - 518 6.7e-07 Outer membrane protein assembly factor BamB
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 4, 1020
AccI GTMKAC 3 cut(s) 518, 792, 1175
AccII CGCG 1 cut(s) 829
AciI CCGC 2 cut(s) 827, 1386
AclWI GGATC 2 cut(s) 327, 340
AcoI YGGCCR 1 cut(s) 131
AcsI RAATTY 1 cut(s) 227
AcyI GRCGYC 2 cut(s) 5, 885
AfaI GTAC 3 cut(s) 734, 959, 1439
AfiI CCNNNNNNNGG 4 cut(s) 77, 140, 342, 850
AgsI TTSAA 3 cut(s) 85, 376, 839
AjnI CCWGG 4 cut(s) 521, 843, 1189, 1361
AluBI AGCT 9 cut(s) 62, 75, 294, 651, 821, 967, 1164, 1184, 1409
AluI AGCT 9 cut(s) 62, 75, 294, 651, 821, 967, 1164, 1184, 1409
Alw26I GTCTC 1 cut(s) 141
AlwI GGATC 2 cut(s) 327, 340
AlwNI CAGNNNCTG 2 cut(s) 1046, 1229
AoxI GGCC 4 cut(s) 92, 131, 613, 1365
ApeKI GCWGC 5 cut(s) 633, 743, 964, 1223, 1394
ApoI RAATTY 1 cut(s) 227
ArsI GACNNNNNNTTYG 4 cut(s) 1034, 1066, 1227, 1259
AseI ATTAAT 1 cut(s) 1086
AspLEI GCGC 2 cut(s) 7, 783
AspS9I GGNCC 9 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1365, 1448
AsuC2I CCSGG 2 cut(s) 1029, 1391
AsuHPI GGTGA 6 cut(s) 254, 452, 544, 610, 1273, 1543
AsuII TTCGAA 1 cut(s) 806
AvaII GGWCC 8 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1448
BaeGI GKGCMC 1 cut(s) 1025
BamHI GGATCC 1 cut(s) 332
BanI GGYRCC 2 cut(s) 4, 1020
BanII GRGCYC 1 cut(s) 1144
BbvI GCAGC 5 cut(s) 620, 755, 976, 1235, 1381
BccI CCATC 6 cut(s) 266, 323, 629, 1008, 1300, 1314
BceAI ACGGC 1 cut(s) 299
BcgI CGANNNNNNTGC 4 cut(s) 1534, 1568, 1593, 1627
BciT130I CCWGG 4 cut(s) 523, 845, 1191, 1363
BciVI GTATCC 1 cut(s) 575
BcnI CCSGG 2 cut(s) 1029, 1391
BcoDI GTCTC 1 cut(s) 141
BfaI CTAG 3 cut(s) 117, 291, 605
BfmI CTRYAG 3 cut(s) 99, 1404, 1602
BfoI RGCGCY 1 cut(s) 8
BfuI GTATCC 1 cut(s) 575
BisI GCNGC 5 cut(s) 634, 744, 965, 1224, 1395
BlsI GCNGC 5 cut(s) 635, 745, 966, 1225, 1396
Bme1390I CCNGG 6 cut(s) 523, 845, 1029, 1191, 1363, 1391
Bme18I GGWCC 8 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1448
BmgT120I GGNCC 9 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1365, 1448
BmiI GGNNCC 6 cut(s) 6, 334, 1014, 1022, 1210, 1609
BmrFI CCNGG 6 cut(s) 523, 845, 1029, 1191, 1363, 1391
BmsI GCATC 3 cut(s) 1059, 1369, 1532
Bpu10I CCTNAGC 2 cut(s) 76, 1198
Bpu14I TTCGAA 1 cut(s) 806
BpuEI CTTGAG 1 cut(s) 108
BpuMI CCSGG 2 cut(s) 1029, 1391
Bsa29I ATCGAT 2 cut(s) 624, 771
BsaAI YACGTR 1 cut(s) 1437
BsaHI GRCGYC 2 cut(s) 5, 885
BsaJI CCNNGG 7 cut(s) 139, 234, 522, 1016, 1362, 1389, 1552
BsaXI ACNNNNNCTCC 4 cut(s) 893, 923, 1497, 1527
Bsc4I CCNNNNNNNGG 4 cut(s) 77, 140, 342, 850
Bse118I RCCGGY 2 cut(s) 437, 941
Bse1I ACTGG 2 cut(s) 388, 1162
Bse3DI GCAATG 6 cut(s) 480, 795, 1254, 1335, 1467, 1543
BseBI CCWGG 4 cut(s) 523, 845, 1191, 1363
BseCI ATCGAT 2 cut(s) 624, 771
BseDI CCNNGG 7 cut(s) 139, 234, 522, 1016, 1362, 1389, 1552
BseGI GGATG 4 cut(s) 596, 1292, 1325, 1547
BseLI CCNNNNNNNGG 4 cut(s) 77, 140, 342, 850
BseMI GCAATG 6 cut(s) 480, 795, 1254, 1335, 1467, 1543
BseMII CTCAG 2 cut(s) 90, 226
BseNI ACTGG 2 cut(s) 388, 1162
BseRI GAGGAG 4 cut(s) 159, 813, 1218, 1221
BseSI GKGCMC 1 cut(s) 1025
BseXI GCAGC 5 cut(s) 620, 755, 976, 1235, 1381
BseYI CCCAGC 1 cut(s) 967
BsgI GTGCAG 4 cut(s) 377, 619, 762, 1242
Bsh1236I CGCG 1 cut(s) 829
BshFI GGCC 4 cut(s) 94, 133, 615, 1367
BshNI GGYRCC 2 cut(s) 4, 1020
BshVI ATCGAT 2 cut(s) 624, 771
BsiSI CCGG 4 cut(s) 438, 942, 1029, 1391
BslFI GGGAC 1 cut(s) 1105
BslI CCNNNNNNNGG 4 cut(s) 77, 140, 342, 850
BsmAI GTCTC 1 cut(s) 141
BsmFI GGGAC 1 cut(s) 1105
BsmI GAATGC 2 cut(s) 276, 845
BsnI GGCC 4 cut(s) 94, 133, 615, 1367
Bsp119I TTCGAA 1 cut(s) 806
Bsp1286I GDGCHC 2 cut(s) 1025, 1144
Bsp143I GATC 4 cut(s) 332, 419, 507, 625
Bsp19I CCATGG 1 cut(s) 139
BspACI CCGC 2 cut(s) 827, 1386
BspANI GGCC 4 cut(s) 94, 133, 615, 1367
BspCNI CTCAG 2 cut(s) 89, 225
BspDI ATCGAT 2 cut(s) 624, 771
BspFNI CGCG 1 cut(s) 829
BspLI GGNNCC 6 cut(s) 6, 334, 1014, 1022, 1210, 1609
BspMAI CTGCAG 2 cut(s) 103, 1606
BspPI GGATC 2 cut(s) 327, 340
BspT104I TTCGAA 1 cut(s) 806
BspT107I GGYRCC 2 cut(s) 4, 1020
BsrDI GCAATG 6 cut(s) 480, 795, 1254, 1335, 1467, 1543
BsrFI RCCGGY 2 cut(s) 437, 941
BsrI ACTGG 2 cut(s) 388, 1162
BssAI RCCGGY 2 cut(s) 437, 941
BssECI CCNNGG 7 cut(s) 139, 234, 522, 1016, 1362, 1389, 1552
BssMI GATC 4 cut(s) 332, 419, 507, 625
BssNI GRCGYC 2 cut(s) 5, 885
BssT1I CCWWGG 2 cut(s) 139, 1016
Bst2UI CCWGG 4 cut(s) 523, 845, 1191, 1363
Bst4CI ACNGT 5 cut(s) 202, 253, 412, 1405, 1513
BstACI GRCGYC 2 cut(s) 5, 885
BstAPI GCANNNNNTGC 1 cut(s) 1542
BstBAI YACGTR 1 cut(s) 1437
BstBI TTCGAA 1 cut(s) 806
BstC8I GCNNGC 3 cut(s) 889, 997, 1339
BstDEI CTNAG 6 cut(s) 76, 212, 1095, 1165, 1198, 1470
BstDSI CCRYGG 2 cut(s) 139, 234
BstEII GGTNACC 1 cut(s) 440
BstF5I GGATG 4 cut(s) 596, 1292, 1325, 1547
BstFNI CGCG 1 cut(s) 829
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 783
BstKTI GATC 4 cut(s) 335, 422, 510, 628
BstMAI GTCTC 1 cut(s) 141
BstMBI GATC 4 cut(s) 332, 419, 507, 625
BstMWI GCNNNNNNNGC 6 cut(s) 743, 1334, 1379, 1394, 1466, 1542
BstNI CCWGG 4 cut(s) 523, 845, 1191, 1363
BstNSI RCATGY 1 cut(s) 999
BstPI GGTNACC 1 cut(s) 440
BstSCI CCNGG 6 cut(s) 521, 843, 1027, 1189, 1361, 1389
BstSFI CTRYAG 3 cut(s) 99, 1404, 1602
BstSLI GKGCMC 1 cut(s) 1025
BstSNI TACGTA 1 cut(s) 1437
BstUI CGCG 1 cut(s) 829
BstV1I GCAGC 5 cut(s) 620, 755, 976, 1235, 1381
BstX2I RGATCY 1 cut(s) 332
BstYI RGATCY 1 cut(s) 332
Bsu15I ATCGAT 2 cut(s) 624, 771
BsuI GTATCC 1 cut(s) 575
BsuRI GGCC 4 cut(s) 94, 133, 615, 1367
BsuTUI ATCGAT 2 cut(s) 624, 771
BtgI CCRYGG 2 cut(s) 139, 234
BtsCI GGATG 4 cut(s) 596, 1292, 1325, 1547
BtsI GCAGTG 2 cut(s) 1348, 1599
BtsIMutI CAGTG 6 cut(s) 220, 381, 417, 1227, 1348, 1599
Cac8I GCNNGC 3 cut(s) 889, 997, 1339
CaiI CAGNNNCTG 2 cut(s) 1046, 1229
CfoI GCGC 2 cut(s) 7, 783
Cfr10I RCCGGY 2 cut(s) 437, 941
Cfr13I GGNCC 9 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1365, 1448
ClaI ATCGAT 2 cut(s) 624, 771
CseI GACGC 2 cut(s) 893, 1052
Csp6I GTAC 3 cut(s) 733, 958, 1438
CviAII CATG 7 cut(s) 140, 556, 700, 788, 996, 1137, 1213
CviQI GTAC 3 cut(s) 733, 958, 1438
DdeI CTNAG 6 cut(s) 76, 212, 1095, 1165, 1198, 1470
DinI GGCGCC 1 cut(s) 6
DpnI GATC 4 cut(s) 334, 421, 509, 627
DpnII GATC 4 cut(s) 332, 419, 507, 625
EaeI YGGCCR 1 cut(s) 131
Eco105I TACGTA 1 cut(s) 1437
Eco130I CCWWGG 2 cut(s) 139, 1016
Eco147I AGGCCT 2 cut(s) 94, 615
Eco24I GRGCYC 1 cut(s) 1144
Eco32I GATATC 1 cut(s) 305
Eco47I GGWCC 8 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1448
Eco91I GGTNACC 1 cut(s) 440
EcoO65I GGTNACC 1 cut(s) 440
EcoRII CCWGG 4 cut(s) 521, 843, 1189, 1361
EcoRV GATATC 1 cut(s) 305
EcoT14I CCWWGG 2 cut(s) 139, 1016
EcoT22I ATGCAT 1 cut(s) 1547
EcoT38I GRGCYC 1 cut(s) 1144
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 139, 1016
FaeI CATG 7 cut(s) 143, 559, 703, 791, 999, 1140, 1216
FalI AAGNNNNNCTT 2 cut(s) 748, 780
FaqI GGGAC 1 cut(s) 1105
FatI CATG 7 cut(s) 139, 555, 699, 787, 995, 1136, 1212
FblI GTMKAC 3 cut(s) 518, 792, 1175
Fnu4HI GCNGC 5 cut(s) 634, 744, 965, 1224, 1395
FokI GGATG 4 cut(s) 583, 1279, 1332, 1554
FriOI GRGCYC 1 cut(s) 1144
Fsp4HI GCNGC 5 cut(s) 634, 744, 965, 1224, 1395
FspBI CTAG 3 cut(s) 117, 291, 605
GlaI GCGC 2 cut(s) 6, 782
GluI GCNGC 5 cut(s) 634, 744, 965, 1224, 1395
GsaI CCCAGC 1 cut(s) 971
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 4 cut(s) 94, 133, 615, 1367
HapII CCGG 4 cut(s) 438, 942, 1029, 1391
HgaI GACGC 2 cut(s) 893, 1052
HhaI GCGC 2 cut(s) 7, 783
Hin1I GRCGYC 2 cut(s) 5, 885
Hin1II CATG 7 cut(s) 143, 559, 703, 791, 999, 1140, 1216
Hin6I GCGC 2 cut(s) 5, 781
HinP1I GCGC 2 cut(s) 5, 781
HincII GTYRAC 4 cut(s) 366, 403, 529, 1588
HindII GTYRAC 4 cut(s) 366, 403, 529, 1588
HinfI GANTC 4 cut(s) 15, 323, 459, 914
HpaI GTTAAC 1 cut(s) 1588
HpaII CCGG 4 cut(s) 438, 942, 1029, 1391
HphI GGTGA 6 cut(s) 254, 452, 544, 610, 1273, 1543
Hpy166II GTNNAC 7 cut(s) 366, 403, 519, 529, 793, 1176, 1588
Hpy188I TCNGA 6 cut(s) 271, 328, 593, 913, 1122, 1556
Hpy188III TCNNGA 6 cut(s) 125, 343, 561, 605, 1040, 1145
Hpy8I GTNNAC 7 cut(s) 366, 403, 519, 529, 793, 1176, 1588
HpyAV CCTTC 7 cut(s) 105, 455, 605, 706, 774, 882, 1633
HpyCH4III ACNGT 5 cut(s) 202, 253, 412, 1405, 1513
HpyCH4IV ACGT 1 cut(s) 1436
HpyF10VI GCNNNNNNNGC 6 cut(s) 743, 1334, 1379, 1394, 1466, 1542
HpyF3I CTNAG 6 cut(s) 76, 212, 1095, 1165, 1198, 1470
HpySE526I ACGT 1 cut(s) 1436
Hsp92I GRCGYC 2 cut(s) 5, 885
Hsp92II CATG 7 cut(s) 143, 559, 703, 791, 999, 1140, 1216
HspAI GCGC 2 cut(s) 5, 781
KasI GGCGCC 1 cut(s) 4
KspAI GTTAAC 1 cut(s) 1588
Kzo9I GATC 4 cut(s) 332, 419, 507, 625
LmnI GCTCC 5 cut(s) 648, 677, 826, 1208, 1505
Lsp1109I GCAGC 5 cut(s) 620, 755, 976, 1235, 1381
LweI GCATC 3 cut(s) 1059, 1369, 1532
MaeI CTAG 3 cut(s) 117, 291, 605
MaeII ACGT 1 cut(s) 1436
MaeIII GTNAC 7 cut(s) 242, 253, 412, 440, 550, 1399, 1562
MalI GATC 4 cut(s) 334, 421, 509, 627
MboI GATC 4 cut(s) 332, 419, 507, 625
MboII GAAGA 7 cut(s) 174, 193, 196, 358, 361, 517, 620
MfeI CAATTG 1 cut(s) 1308
MflI RGATCY 1 cut(s) 332
MhlI GDGCHC 2 cut(s) 1025, 1144
MluCI AATT 6 cut(s) 227, 659, 834, 1083, 1308, 1594
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 923
MmeI TCCRAC 2 cut(s) 436, 571
Mph1103I ATGCAT 1 cut(s) 1547
MseI TTAA 6 cut(s) 318, 657, 1086, 1575, 1587, 1633
MspA1I CMGCKG 1 cut(s) 967
MspI CCGG 4 cut(s) 438, 942, 1029, 1391
MspR9I CCNGG 6 cut(s) 523, 845, 1029, 1191, 1363, 1391
MunI CAATTG 1 cut(s) 1308
Mva1269I GAATGC 2 cut(s) 276, 845
MvaI CCWGG 4 cut(s) 523, 845, 1191, 1363
MvnI CGCG 1 cut(s) 829
MwoI GCNNNNNNNGC 6 cut(s) 743, 1334, 1379, 1394, 1466, 1542
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 2 cut(s) 1029, 1391
NcoI CCATGG 1 cut(s) 139
NdeII GATC 4 cut(s) 332, 419, 507, 625
NlaIII CATG 7 cut(s) 143, 559, 703, 791, 999, 1140, 1216
NlaIV GGNNCC 6 cut(s) 6, 334, 1014, 1022, 1210, 1609
NmuCI GTSAC 4 cut(s) 242, 412, 440, 550
NsiI ATGCAT 1 cut(s) 1547
NspI RCATGY 1 cut(s) 999
NspV TTCGAA 1 cut(s) 806
PaeI GCATGC 1 cut(s) 999
PceI AGGCCT 2 cut(s) 94, 615
PctI GAATGC 2 cut(s) 276, 845
PfeI GAWTC 3 cut(s) 15, 323, 459
PkrI GCNGC 5 cut(s) 635, 745, 966, 1225, 1396
PleI GAGTC 1 cut(s) 922
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 922
Ppu21I YACGTR 1 cut(s) 1437
PshBI ATTAAT 1 cut(s) 1086
Psp6I CCWGG 4 cut(s) 521, 843, 1189, 1361
PspEI GGTNACC 1 cut(s) 440
PspFI CCCAGC 1 cut(s) 967
PspGI CCWGG 4 cut(s) 521, 843, 1189, 1361
PspN4I GGNNCC 6 cut(s) 6, 334, 1014, 1022, 1210, 1609
PspPI GGNCC 9 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1365, 1448
PsrI GAACNNNNNNTAC 2 cut(s) 1101, 1133
PstI CTGCAG 2 cut(s) 103, 1606
PstNI CAGNNNCTG 2 cut(s) 1046, 1229
PsuI RGATCY 1 cut(s) 332
PvuII CAGCTG 1 cut(s) 967
RsaI GTAC 3 cut(s) 734, 959, 1439
RsaNI GTAC 3 cut(s) 733, 958, 1438
SaqAI TTAA 6 cut(s) 318, 657, 1086, 1575, 1587, 1633
SatI GCNGC 5 cut(s) 634, 744, 965, 1224, 1395
Sau3AI GATC 4 cut(s) 332, 419, 507, 625
Sau96I GGNCC 9 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1365, 1448
SchI GAGTC 1 cut(s) 923
ScrFI CCNGG 6 cut(s) 523, 845, 1029, 1191, 1363, 1391
SduI GDGCHC 2 cut(s) 1025, 1144
SfaNI GCATC 3 cut(s) 1059, 1369, 1532
SfcI CTRYAG 3 cut(s) 99, 1404, 1602
SfoI GGCGCC 1 cut(s) 6
SfuI TTCGAA 1 cut(s) 806
SgrAI CRCCGGYG 1 cut(s) 437
SinI GGWCC 8 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1448
SmlI CTYRAG 1 cut(s) 123
SmoI CTYRAG 1 cut(s) 123
SnaBI TACGTA 1 cut(s) 1437
SphI GCATGC 1 cut(s) 999
Sse9I AATT 6 cut(s) 227, 659, 834, 1083, 1308, 1594
SseBI AGGCCT 2 cut(s) 94, 615
SsiI CCGC 2 cut(s) 827, 1386
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 1 cut(s) 88
SspMI CTAG 3 cut(s) 117, 291, 605
StuI AGGCCT 2 cut(s) 94, 615
StyD4I CCNGG 6 cut(s) 521, 843, 1027, 1189, 1361, 1389
StyI CCWWGG 2 cut(s) 139, 1016
TaaI ACNGT 5 cut(s) 202, 253, 412, 1405, 1513
TaiI ACGT 1 cut(s) 1439
TaqI TCGA 3 cut(s) 624, 771, 806
TaqII GACCGA 1 cut(s) 1164
TasI AATT 6 cut(s) 227, 659, 834, 1083, 1308, 1594
TfiI GAWTC 3 cut(s) 15, 323, 459
Tru1I TTAA 6 cut(s) 318, 657, 1086, 1575, 1587, 1633
Tru9I TTAA 6 cut(s) 318, 657, 1086, 1575, 1587, 1633
TscAI CASTG 6 cut(s) 220, 388, 417, 1234, 1348, 1606
TseFI GTSAC 4 cut(s) 242, 412, 440, 550
TseI GCWGC 5 cut(s) 633, 743, 964, 1223, 1394
Tsp45I GTSAC 4 cut(s) 242, 412, 440, 550
TspDTI ATGAA 3 cut(s) 379, 688, 1478
TspGWI ACGGA 3 cut(s) 191, 223, 1193
TspRI CASTG 6 cut(s) 220, 388, 417, 1234, 1348, 1606
VpaK11BI GGWCC 8 cut(s) 467, 495, 1012, 1031, 1147, 1187, 1359, 1448
VspI ATTAAT 1 cut(s) 1086
XapI RAATTY 1 cut(s) 227
XbaI TCTAGA 1 cut(s) 604
XceI RCATGY 1 cut(s) 999
XmiI GTMKAC 3 cut(s) 518, 792, 1175
XspI CTAG 3 cut(s) 117, 291, 605
Zsp2I ATGCAT 1 cut(s) 1547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.