Rh4DG383100

PQQ-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0001008
Physical Location & Seq
Forward (+)
60060339 .. 60062225
1887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG383100.1

Sequence Viewer

Length: 1602 bp
ATGGTTTCCATACGACATCCGAAATGTCATAGCACCGTAAACATGCTAGTTATGTGCTTATGTTTATTTACACTTCTTGATACAACGTTTGCAATTTGGCTCAATCACGGAGGTGACAATAGTAACAGAAGGTATGCTAATGGGGAATTGCTCATCACCCCAAGGACGGTGTTAAAAATGCAACAAAAATGGTCATTTTTCGCCGGTAAAGACATAACTGCAACCCCTGCAGTGGCTGATGGAAGGGTCTATTTCCCATCATGGAATGGATTTCTGTACGCGGTGAATGCATTTACCGGCGCTTTGATATGGAAGCAGAATCTTAGTCAGTTAACTGGACTAAATGGCACAGGAGTCGTTGTGAATGTGACTGTGTCGAGATCAACCCCAACAATAGCTGGTAACCTCTTGATCGTTGGTATTTATGGACCTGCTGTTGTGATTGCTGTGGAGCGATCGAACGGGAGGCTTGTCTGGTCAAGTCAACTAGACCCACGCCCTCGAACTATGATCACGATGTCTGGCACCGTACTCCTAGGGTCATTTTATGTAGGGGTGTCATCTCTGGAAGAAGGCTTACCAGCTTCTCAGTGTTGCAGTTTCCGTGGCAGTGTAGCAAAGCTAGATGTTAGAACTGGTGCAGTCTTATGGCGGACTTACATGCTACCGGACAATGGTGGTAGATTGAACGGTTATTCGGGAGCTGCAGTATGGGGAAGCAGCCCTGCCATTGATGTGTTGCGGAGACATGTCTATGTATCAACTGGGAACCTCTACACAGCTCCACCTGAGGTGCTTCAATGTCAAGAGAAACAGAATAACCAGACAGTAACGCCTACACAGCCTGACCAGTGCACCGGTCCAGATATCCACTTCAATTCAATTATAGCATTGGATCTTGTTACCGGGAGGATTGTATGGTCTAGGCAGCTAGGTGGTTACGACATTTTCTACTTCGCTTGTTTGATACCGAACAACCCCGACTGCCCACCAGGACCTAATGATGATGCCGACTTTGGAGAGGCACCAATGCTGCTTACCATACACCCTAATGGAACAAGACGTGACGTCGTGGTGGCCGTGCAGAAGAGTGGGTTTGCTTGGGCTCTAGACCGTGACAATGGAAACATTGTTTGGTTCAAGTTGGCTGGACCAGGTAGCAATGAAGGAGGAGGGATATGGGGTGCAGCCACAGATGGGAGAAGGGTGTACACAAACATCGCCAACGGCCAACGACAGATGTTCCCTCTAGCACCATCAAACCTAACAACAACGGCTGGAGCATGGGTGGGTCTTGATGCAGATACCGGGAAGATTTTGTGGTCAACAGCAAACCCAAGCAATGACACTGCCCAGGCACCTGTTACAGTTGCTAATGGTGTTGTTTTTGCTGGGTCTGTAGCTTCGAATGGTCCCATATATGCCATGGATGCAACCACTGGAAAGATTTTGTGGTCAATCAATACTGGTTCTACAATATACGGGGGTGTCGCAGCAAGCTATGGGTGCATTTATCTAGGAAATGGGTACACAGTTGGCCTGGCCAAGTTTCACCCTACTTGGACAGGTGGTACTTCACTGTTTGCTTTCTGCGTTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PQQ PQQ_2

Protein Analysis

533

Amino Acids

57.03

Weight (kDa)

8.42

Isoelectric Point (pI)

27.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PQQ PF01011 33 - 379 1e-17 Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain
PQQ_2 PF13360 64 - 308 9.6e-16 Outer membrane protein assembly factor BamB
PQQ_2 PF13360 369 - 489 7.9e-09 Outer membrane protein assembly factor BamB
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1071
Acc36I ACCTGC 1 cut(s) 439
AccB1I GGYRCC 3 cut(s) 524, 1024, 1357
AccII CGCG 1 cut(s) 281
AciI CCGC 3 cut(s) 281, 652, 742
AclI AACGTT 1 cut(s) 86
AclWI GGATC 1 cut(s) 903
AcoI YGGCCR 3 cut(s) 1077, 1228, 1542
AcyI GRCGYC 1 cut(s) 1068
AfaI GTAC 5 cut(s) 278, 531, 1211, 1529, 1573
AfiI CCNNNNNNNGG 4 cut(s) 166, 232, 674, 1197
AflIII ACRYGT 1 cut(s) 748
AgeI ACCGGT 1 cut(s) 857
AgsI TTSAA 5 cut(s) 688, 800, 877, 882, 1141
AhdI GACNNNNNGTC 1 cut(s) 1067
AjiI CACGTC 1 cut(s) 1064
AjnI CCWGG 4 cut(s) 991, 1153, 1353, 1539
AjuI GAANNNNNNNTTGG 2 cut(s) 1117, 1149
AleI CACNNNNGTG 1 cut(s) 111
AluBI AGCT 8 cut(s) 398, 584, 622, 704, 782, 931, 1403, 1500
AluI AGCT 8 cut(s) 398, 584, 622, 704, 782, 931, 1403, 1500
Alw21I GWGCWC 1 cut(s) 857
Alw26I GTCTC 1 cut(s) 739
Alw44I GTGCAC 1 cut(s) 853
AlwI GGATC 1 cut(s) 903
AlwNI CAGNNNCTG 1 cut(s) 236
AoxI GGCC 4 cut(s) 1077, 1228, 1537, 1542
ApaLI GTGCAC 1 cut(s) 853
ApeKI GCWGC 6 cut(s) 704, 720, 928, 1033, 1187, 1493
AsiGI ACCGGT 1 cut(s) 857
AspA2I CCTAGG 1 cut(s) 535
AspLEI GCGC 1 cut(s) 302
AspS9I GGNCC 5 cut(s) 428, 860, 995, 1151, 1412
AsuC2I CCSGG 2 cut(s) 907, 1309
AsuHPI GGTGA 4 cut(s) 125, 148, 295, 1544
AsuII TTCGAA 1 cut(s) 1406
AvaII GGWCC 5 cut(s) 428, 860, 995, 1151, 1412
AvrII CCTAGG 1 cut(s) 535
AxyI CCTNAGG 1 cut(s) 789
BaeGI GKGCMC 1 cut(s) 857
BalI TGGCCA 1 cut(s) 1544
BanI GGYRCC 3 cut(s) 524, 1024, 1357
BanII GRGCYC 1 cut(s) 1108
BarI GAAGNNNNNNTAC 2 cut(s) 561, 593
Bbv12I GWGCWC 1 cut(s) 857
BbvI GCAGC 6 cut(s) 691, 732, 940, 1020, 1199, 1505
BccI CCATC 4 cut(s) 233, 265, 1190, 1264
BceAI ACGGC 3 cut(s) 1064, 1243, 1290
BcgI CGANNNNNNTGC 2 cut(s) 337, 371
BciT130I CCWGG 4 cut(s) 993, 1155, 1355, 1541
BclI TGATCA 1 cut(s) 510
BcnI CCSGG 2 cut(s) 907, 1309
BcoDI GTCTC 1 cut(s) 739
BfaI CTAG 9 cut(s) 47, 488, 536, 623, 924, 932, 1109, 1250, 1517
BfmI CTRYAG 3 cut(s) 228, 705, 1398
BfoI RGCGCY 1 cut(s) 303
BfuAI ACCTGC 1 cut(s) 439
BisI GCNGC 6 cut(s) 705, 721, 929, 1034, 1188, 1494
BlnI CCTAGG 1 cut(s) 535
BlsI GCNGC 6 cut(s) 706, 722, 930, 1035, 1189, 1495
Bme1390I CCNGG 6 cut(s) 907, 993, 1155, 1309, 1355, 1541
Bme18I GGWCC 5 cut(s) 428, 860, 995, 1151, 1412
BmeRI GACNNNNNGTC 1 cut(s) 1067
BmgBI CACGTC 1 cut(s) 1064
BmgT120I GGNCC 5 cut(s) 428, 860, 995, 1151, 1412
BmiI GGNNCC 5 cut(s) 526, 770, 1026, 1359, 1414
BmrFI CCNGG 6 cut(s) 907, 993, 1155, 1309, 1355, 1541
BmrI ACTGGG 1 cut(s) 774
BmsI GCATC 3 cut(s) 997, 1288, 1420
BmuI ACTGGG 1 cut(s) 774
BpmI CTGGAG 1 cut(s) 1299
Bpu14I TTCGAA 1 cut(s) 1406
BpuMI CCSGG 2 cut(s) 907, 1309
BsaHI GRCGYC 1 cut(s) 1068
BsaJI CCNNGG 5 cut(s) 161, 535, 604, 1353, 1425
BsaWI WCCGGW 2 cut(s) 667, 857
BsaXI ACNNNNNCTCC 6 cut(s) 345, 375, 693, 723, 1272, 1302
Bsc4I CCNNNNNNNGG 4 cut(s) 166, 232, 674, 1197
Bse118I RCCGGY 3 cut(s) 203, 296, 857
Bse1I ACTGG 6 cut(s) 340, 640, 769, 850, 1444, 1471
Bse21I CCTNAGG 1 cut(s) 789
Bse3DI GCAATG 2 cut(s) 1168, 1348
BseBI CCWGG 4 cut(s) 993, 1155, 1355, 1541
BseDI CCNNGG 5 cut(s) 161, 535, 604, 1353, 1425
BseGI GGATG 2 cut(s) 16, 1435
BseLI CCNNNNNNNGG 4 cut(s) 166, 232, 674, 1197
BseMI GCAATG 2 cut(s) 1168, 1348
BseMII CTCAG 2 cut(s) 602, 780
BseNI ACTGG 6 cut(s) 340, 640, 769, 850, 1444, 1471
BseRI GAGGAG 1 cut(s) 1185
BseSI GKGCMC 1 cut(s) 857
BseXI GCAGC 6 cut(s) 691, 732, 940, 1020, 1199, 1505
BseYI CCCAGC 1 cut(s) 1391
BsgI GTGCAG 3 cut(s) 660, 1103, 1206
Bsh1236I CGCG 1 cut(s) 281
Bsh1285I CGRYCG 1 cut(s) 458
BshFI GGCC 4 cut(s) 1079, 1230, 1539, 1544
BshNI GGYRCC 3 cut(s) 524, 1024, 1357
BshTI ACCGGT 1 cut(s) 857
BsiEI CGRYCG 1 cut(s) 458
BsiHKAI GWGCWC 1 cut(s) 857
BsiSI CCGG 6 cut(s) 204, 297, 668, 858, 906, 1308
BslFI GGGAC 1 cut(s) 1398
BslI CCNNNNNNNGG 4 cut(s) 166, 232, 674, 1197
BsmAI GTCTC 1 cut(s) 739
BsmFI GGGAC 1 cut(s) 1398
BsmI GAATGC 1 cut(s) 292
BsnI GGCC 4 cut(s) 1079, 1230, 1539, 1544
Bsp119I TTCGAA 1 cut(s) 1406
Bsp1286I GDGCHC 2 cut(s) 857, 1108
Bsp1407I TGTACA 1 cut(s) 1209
Bsp143I GATC 5 cut(s) 380, 411, 455, 510, 895
Bsp19I CCATGG 1 cut(s) 1425
BspACI CCGC 3 cut(s) 281, 652, 742
BspANI GGCC 4 cut(s) 1079, 1230, 1539, 1544
BspCNI CTCAG 2 cut(s) 601, 781
BspFNI CGCG 1 cut(s) 281
BspLI GGNNCC 5 cut(s) 526, 770, 1026, 1359, 1414
BspMAI CTGCAG 2 cut(s) 232, 709
BspMI ACCTGC 1 cut(s) 439
BspPI GGATC 1 cut(s) 903
BspT104I TTCGAA 1 cut(s) 1406
BspT107I GGYRCC 3 cut(s) 524, 1024, 1357
BsrDI GCAATG 2 cut(s) 1168, 1348
BsrFI RCCGGY 3 cut(s) 203, 296, 857
BsrGI TGTACA 1 cut(s) 1209
BsrI ACTGG 6 cut(s) 340, 640, 769, 850, 1444, 1471
BssAI RCCGGY 3 cut(s) 203, 296, 857
BssECI CCNNGG 5 cut(s) 161, 535, 604, 1353, 1425
BssMI GATC 5 cut(s) 380, 411, 455, 510, 895
BssNI GRCGYC 1 cut(s) 1068
BssT1I CCWWGG 3 cut(s) 161, 535, 1425
Bst2UI CCWGG 4 cut(s) 993, 1155, 1355, 1541
Bst6I CTCTTC 1 cut(s) 1082
BstACI GRCGYC 1 cut(s) 1068
BstAPI GCANNNNNTGC 1 cut(s) 227
BstAUI TGTACA 1 cut(s) 1209
BstBI TTCGAA 1 cut(s) 1406
BstC8I GCNNGC 1 cut(s) 1498
BstDEI CTNAG 3 cut(s) 323, 588, 789
BstDSI CCRYGG 2 cut(s) 604, 1425
BstEII GGTNACC 1 cut(s) 401
BstF5I GGATG 2 cut(s) 16, 1435
BstFNI CGCG 1 cut(s) 281
BstH2I RGCGCY 1 cut(s) 303
BstHHI GCGC 1 cut(s) 302
BstKTI GATC 5 cut(s) 383, 414, 458, 513, 898
BstMAI GTCTC 1 cut(s) 739
BstMBI GATC 5 cut(s) 380, 411, 455, 510, 895
BstMCI CGRYCG 1 cut(s) 458
BstMWI GCNNNNNNNGC 5 cut(s) 227, 287, 841, 1430, 1506
BstNI CCWGG 4 cut(s) 993, 1155, 1355, 1541
BstNSI RCATGY 3 cut(s) 46, 664, 752
BstPI GGTNACC 1 cut(s) 401
BstSCI CCNGG 6 cut(s) 905, 991, 1153, 1307, 1353, 1539
BstSFI CTRYAG 3 cut(s) 228, 705, 1398
BstSLI GKGCMC 1 cut(s) 857
BstUI CGCG 1 cut(s) 281
BstV1I GCAGC 6 cut(s) 691, 732, 940, 1020, 1199, 1505
BstX2I RGATCY 1 cut(s) 895
BstYI RGATCY 1 cut(s) 895
Bsu36I CCTNAGG 1 cut(s) 789
BsuRI GGCC 4 cut(s) 1079, 1230, 1539, 1544
BtgI CCRYGG 2 cut(s) 604, 1425
BtgZI GCGATG 1 cut(s) 1204
BtrI CACGTC 1 cut(s) 1064
BtsCI GGATG 2 cut(s) 16, 1435
BtsI GCAGTG 3 cut(s) 237, 616, 1347
BtsIMutI CAGTG 7 cut(s) 237, 596, 616, 857, 1347, 1437, 1577
BveI ACCTGC 1 cut(s) 439
Cac8I GCNNGC 1 cut(s) 1498
CaiI CAGNNNCTG 1 cut(s) 236
CfoI GCGC 1 cut(s) 302
Cfr10I RCCGGY 3 cut(s) 203, 296, 857
Cfr13I GGNCC 5 cut(s) 428, 860, 995, 1151, 1412
CsiI ACCWGGT 1 cut(s) 1153
Csp6I GTAC 5 cut(s) 277, 530, 1210, 1528, 1572
CspAI ACCGGT 1 cut(s) 857
CviAII CATG 6 cut(s) 43, 261, 661, 749, 1284, 1426
CviQI GTAC 5 cut(s) 277, 530, 1210, 1528, 1572
DdeI CTNAG 3 cut(s) 323, 588, 789
DpnI GATC 5 cut(s) 382, 413, 457, 512, 897
DpnII GATC 5 cut(s) 380, 411, 455, 510, 895
DriI GACNNNNNGTC 1 cut(s) 1067
EaeI YGGCCR 3 cut(s) 1077, 1228, 1542
Eam1104I CTCTTC 1 cut(s) 1082
Eam1105I GACNNNNNGTC 1 cut(s) 1067
EarI CTCTTC 1 cut(s) 1082
EciI GGCGGA 1 cut(s) 667
Eco130I CCWWGG 3 cut(s) 161, 535, 1425
Eco24I GRGCYC 1 cut(s) 1108
Eco32I GATATC 1 cut(s) 868
Eco47I GGWCC 5 cut(s) 428, 860, 995, 1151, 1412
Eco81I CCTNAGG 1 cut(s) 789
Eco91I GGTNACC 1 cut(s) 401
EcoO109I RGGNCCY 1 cut(s) 995
EcoO65I GGTNACC 1 cut(s) 401
EcoRII CCWGG 4 cut(s) 991, 1153, 1353, 1539
EcoRV GATATC 1 cut(s) 868
EcoT14I CCWWGG 3 cut(s) 161, 535, 1425
EcoT22I ATGCAT 1 cut(s) 292
EcoT38I GRGCYC 1 cut(s) 1108
ErhI CCWWGG 3 cut(s) 161, 535, 1425
FaeI CATG 6 cut(s) 46, 264, 664, 752, 1287, 1429
FaqI GGGAC 1 cut(s) 1398
FatI CATG 6 cut(s) 42, 260, 660, 748, 1283, 1425
FbaI TGATCA 1 cut(s) 510
Fnu4HI GCNGC 6 cut(s) 705, 721, 929, 1034, 1188, 1494
FokI GGATG 2 cut(s) 3, 1442
FriOI GRGCYC 1 cut(s) 1108
Fsp4HI GCNGC 6 cut(s) 705, 721, 929, 1034, 1188, 1494
FspBI CTAG 9 cut(s) 47, 488, 536, 623, 924, 932, 1109, 1250, 1517
GlaI GCGC 1 cut(s) 301
GluI GCNGC 6 cut(s) 705, 721, 929, 1034, 1188, 1494
GsaI CCCAGC 1 cut(s) 1395
GsuI CTGGAG 1 cut(s) 1299
HaeII RGCGCY 1 cut(s) 303
HaeIII GGCC 4 cut(s) 1079, 1230, 1539, 1544
HapII CCGG 6 cut(s) 204, 297, 668, 858, 906, 1308
HhaI GCGC 1 cut(s) 302
Hin1I GRCGYC 1 cut(s) 1068
Hin1II CATG 6 cut(s) 46, 264, 664, 752, 1287, 1429
Hin6I GCGC 1 cut(s) 300
HinP1I GCGC 1 cut(s) 300
HincII GTYRAC 3 cut(s) 333, 485, 1326
HindII GTYRAC 3 cut(s) 333, 485, 1326
HinfI GANTC 2 cut(s) 319, 354
HpaI GTTAAC 1 cut(s) 333
HpaII CCGG 6 cut(s) 204, 297, 668, 858, 906, 1308
HphI GGTGA 4 cut(s) 125, 148, 295, 1544
Hpy166II GTNNAC 8 cut(s) 40, 333, 485, 855, 1210, 1212, 1326, 1530
Hpy188I TCNGA 1 cut(s) 21
Hpy8I GTNNAC 8 cut(s) 40, 333, 485, 855, 1210, 1212, 1326, 1530
Hpy99I CGWCG 1 cut(s) 1073
HpyAV CCTTC 5 cut(s) 123, 237, 566, 1160, 1197
HpyCH4IV ACGT 3 cut(s) 86, 1063, 1068
HpyF10VI GCNNNNNNNGC 5 cut(s) 227, 287, 841, 1430, 1506
HpyF3I CTNAG 3 cut(s) 323, 588, 789
HpySE526I ACGT 3 cut(s) 86, 1063, 1068
Hsp92I GRCGYC 1 cut(s) 1068
Hsp92II CATG 6 cut(s) 46, 264, 664, 752, 1287, 1429
HspAI GCGC 1 cut(s) 300
Ksp22I TGATCA 1 cut(s) 510
KspAI GTTAAC 1 cut(s) 333
Kzo9I GATC 5 cut(s) 380, 411, 455, 510, 895
LmnI GCTCC 4 cut(s) 451, 701, 787, 1280
Lsp1109I GCAGC 6 cut(s) 691, 732, 940, 1020, 1199, 1505
LweI GCATC 3 cut(s) 997, 1288, 1420
MabI ACCWGGT 1 cut(s) 1153
MaeI CTAG 9 cut(s) 47, 488, 536, 623, 924, 932, 1109, 1250, 1517
MaeII ACGT 3 cut(s) 86, 1063, 1068
MalI GATC 5 cut(s) 382, 413, 457, 512, 897
MboI GATC 5 cut(s) 380, 411, 455, 510, 895
MboII GAAGA 3 cut(s) 581, 1099, 1324
MflI RGATCY 1 cut(s) 895
MhlI GDGCHC 2 cut(s) 857, 1108
MlsI TGGCCA 1 cut(s) 1544
MluCI AATT 4 cut(s) 93, 146, 877, 882
MluNI TGGCCA 1 cut(s) 1544
MlyI GAGTC 1 cut(s) 363
Mox20I TGGCCA 1 cut(s) 1544
Mph1103I ATGCAT 1 cut(s) 292
MscI TGGCCA 1 cut(s) 1544
MseI TTAA 2 cut(s) 173, 332
MslI CAYNNNNRTG 4 cut(s) 111, 734, 753, 1050
Msp20I TGGCCA 1 cut(s) 1544
MspI CCGG 6 cut(s) 204, 297, 668, 858, 906, 1308
MspR9I CCNGG 6 cut(s) 907, 993, 1155, 1309, 1355, 1541
Mva1269I GAATGC 1 cut(s) 292
MvaI CCWGG 4 cut(s) 993, 1155, 1355, 1541
MvnI CGCG 1 cut(s) 281
MwoI GCNNNNNNNGC 5 cut(s) 227, 287, 841, 1430, 1506
NciI CCSGG 2 cut(s) 907, 1309
NcoI CCATGG 1 cut(s) 1425
NdeII GATC 5 cut(s) 380, 411, 455, 510, 895
NlaIII CATG 6 cut(s) 46, 264, 664, 752, 1287, 1429
NlaIV GGNNCC 5 cut(s) 526, 770, 1026, 1359, 1414
NmuCI GTSAC 4 cut(s) 113, 367, 1064, 1115
NsiI ATGCAT 1 cut(s) 292
NspI RCATGY 3 cut(s) 46, 664, 752
NspV TTCGAA 1 cut(s) 1406
OliI CACNNNNGTG 1 cut(s) 111
PciI ACATGT 1 cut(s) 748
PcsI WCGNNNNNNNCGW 1 cut(s) 1077
PctI GAATGC 1 cut(s) 292
PfeI GAWTC 1 cut(s) 319
PflFI GACNNNGTC 1 cut(s) 373
PinAI ACCGGT 1 cut(s) 857
PkrI GCNGC 6 cut(s) 706, 722, 930, 1035, 1189, 1495
Ple19I CGATCG 1 cut(s) 458
PleI GAGTC 1 cut(s) 362
PpsI GAGTC 1 cut(s) 362
PpuMI RGGWCCY 1 cut(s) 995
PscI ACATGT 1 cut(s) 748
Psp1406I AACGTT 1 cut(s) 86
Psp5II RGGWCCY 1 cut(s) 995
Psp6I CCWGG 4 cut(s) 991, 1153, 1353, 1539
PspEI GGTNACC 1 cut(s) 401
PspFI CCCAGC 1 cut(s) 1391
PspGI CCWGG 4 cut(s) 991, 1153, 1353, 1539
PspN4I GGNNCC 5 cut(s) 526, 770, 1026, 1359, 1414
PspPI GGNCC 5 cut(s) 428, 860, 995, 1151, 1412
PspPPI RGGWCCY 1 cut(s) 995
PstI CTGCAG 2 cut(s) 232, 709
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 1 cut(s) 895
PsyI GACNNNGTC 1 cut(s) 373
PvuI CGATCG 1 cut(s) 458
RsaI GTAC 5 cut(s) 278, 531, 1211, 1529, 1573
RsaNI GTAC 5 cut(s) 277, 530, 1210, 1528, 1572
RseI CAYNNNNRTG 4 cut(s) 111, 734, 753, 1050
SaqAI TTAA 2 cut(s) 173, 332
SatI GCNGC 6 cut(s) 705, 721, 929, 1034, 1188, 1494
Sau3AI GATC 5 cut(s) 380, 411, 455, 510, 895
Sau96I GGNCC 5 cut(s) 428, 860, 995, 1151, 1412
SchI GAGTC 1 cut(s) 363
ScrFI CCNGG 6 cut(s) 907, 993, 1155, 1309, 1355, 1541
SduI GDGCHC 2 cut(s) 857, 1108
SexAI ACCWGGT 1 cut(s) 1153
SfaNI GCATC 3 cut(s) 997, 1288, 1420
SfcI CTRYAG 3 cut(s) 228, 705, 1398
SfuI TTCGAA 1 cut(s) 1406
SinI GGWCC 5 cut(s) 428, 860, 995, 1151, 1412
SmiMI CAYNNNNRTG 4 cut(s) 111, 734, 753, 1050
Sse9I AATT 4 cut(s) 93, 146, 877, 882
SsiI CCGC 3 cut(s) 281, 652, 742
SspMI CTAG 9 cut(s) 47, 488, 536, 623, 924, 932, 1109, 1250, 1517
StyD4I CCNGG 6 cut(s) 905, 991, 1153, 1307, 1353, 1539
StyI CCWWGG 3 cut(s) 161, 535, 1425
TaiI ACGT 3 cut(s) 89, 1066, 1071
TaqI TCGA 4 cut(s) 377, 458, 502, 1406
TasI AATT 4 cut(s) 93, 146, 877, 882
TatI WGTACW 1 cut(s) 1209
TfiI GAWTC 1 cut(s) 319
Tru1I TTAA 2 cut(s) 173, 332
Tru9I TTAA 2 cut(s) 173, 332
TscAI CASTG 7 cut(s) 237, 596, 616, 857, 1354, 1444, 1584
TseFI GTSAC 4 cut(s) 113, 367, 1064, 1115
TseI GCWGC 6 cut(s) 704, 720, 928, 1033, 1187, 1493
Tsp45I GTSAC 4 cut(s) 113, 367, 1064, 1115
TspDTI ATGAA 1 cut(s) 1179
TspGWI ACGGA 2 cut(s) 123, 593
TspRI CASTG 7 cut(s) 237, 596, 616, 857, 1354, 1444, 1584
Tth111I GACNNNGTC 1 cut(s) 373
VneI GTGCAC 1 cut(s) 853
VpaK11BI GGWCC 5 cut(s) 428, 860, 995, 1151, 1412
XbaI TCTAGA 1 cut(s) 1108
XceI RCATGY 3 cut(s) 46, 664, 752
XcmI CCANNNNNNNNNTGG 1 cut(s) 1423
XmaJI CCTAGG 1 cut(s) 535
XspI CTAG 9 cut(s) 47, 488, 536, 623, 924, 932, 1109, 1250, 1517
ZraI GACGTC 1 cut(s) 1069
Zsp2I ATGCAT 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.