MD10G1305000.v1.1

Equilibrative nucleotide transporter 3-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
39126011 .. 39129069
3059 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1305000.v1.1.491

Sequence Viewer

Length: 1275 bp
ATGACCACCATGATTGAGGAAAATGGAACCAGGGCTCCATTAAAGCTTGAGCAGGGACAGTATAAAGCTTTAGCAGTTTGTTGGTTCCTGGGGCTGGGATCCCTTGTTGCTTGGAACAGTATGCTCACCATAGGTGATTACTACTATAACTTGTTTCCGACTTACCATCCATCGCGGGTTCTCACCCTTGTTTATCAACCGTTTGCATTTATAACAATGGCAACACTTGCATACCATGAAGCAAAGGTTGACACCAGAAAGCGGAATTTAATTGGATATGCTCTCTTCTTCCTCGCTACCTTGATGCTTATAATTGTGGATGTAGCCACATCTGCGGGCGGAGGAGTTGGACCTTATATCGGTATATGCGCATGTGTTGCTGCATTTGGGGTTGCAGATGCCCACGTTCAAGGTGGAATGGTCGGGGACCTGTCGTTGATGCGTCCTGAATTCATCCAGTCCTTCTTTGCGGGTTTGGCTGCATCAGGCGCTCTAACCTCCGGCTTGCGGCTGATGACAAAAGCTGCCTTTGAGAAGTCTCATGATGGTCTTCGCAAGGGGACGATGTTGTTCCTGACAATTTCCACATTCACCGAGTTTCTCTGTATTCTTCTATATGCATTTTACTTCCCGAGATTGCCTATAGTGAAGTACTACCGCTCAAAGGCAGCTTCCGAAGGCTCTAAAACTGTAACCGCCGATCTTGCTGCTGCTGGAGTCCAAACACAAGCAGACATAGAAGTCTCAAACGATGCCAAAGTAGTTCCAACTCGATTGAGCACTATGCAGATATTCAAGCAGAATATAGATTTTTGCCTTGACTTGTTTCTGATATATGTGCTGACATTATCAATCTTCCCTGGTTTCATATACGAAAATACCGGAAATCACCAGTTGGGGACATGGTATCCCCTTGTCCTGGTTGCAATGTACAATGTGTTGGATTTGATATCGCGATACATACCCCTCATCAAATGCCTGAAGATCGAGTCCAGAAAGGGTCTCCTGATTGCAATCCTATTGCGTTTCCTCTTCGTTCCAGCGTACTACTTCACAGGAAAGTACGCTGACCAAGGGTGGATGATCTTGCTGACATCAATCTTAGGATTAACAAATGGTTATCTCACTGTCTGTGTCATGACAGTGGCACCGAAAGGCTACAACGGACCTGAGCAAAATGCCTTGGGAAATATACTTGTTCTGTTTCTTTTGGGAGGCATATTTGCAGGGGTTTGCCTTGACTGGTTGTGGCTCATTGGTAAGGAAAAATTCTAA

Protein Analysis

425

Amino Acids

46.84

Weight (kDa)

8.62

Isoelectric Point (pI)

32.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nucleoside_tran PF01733 126 - 417 4.5e-31 Nucleoside transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 212, 311
AasI GACNNNNNNGTC 1 cut(s) 740
Acc16I TGCGCA 1 cut(s) 370
AccB1I GGYRCC 1 cut(s) 1147
AccBSI CCGCTC 1 cut(s) 660
AccII CGCG 2 cut(s) 175, 955
AciI CCGC 8 cut(s) 175, 262, 335, 339, 470, 508, 658, 696
AclWI GGATC 2 cut(s) 93, 106
AcsI RAATTY 3 cut(s) 265, 449, 1268
AcuI CTGAAG 1 cut(s) 1001
AfaI GTAC 4 cut(s) 653, 932, 1046, 1064
AfiI CCNNNNNNNGG 6 cut(s) 94, 261, 359, 507, 664, 919
AgsI TTSAA 2 cut(s) 410, 796
AjnI CCWGG 4 cut(s) 29, 87, 859, 918
AloI GAACNNNNNNTCC 2 cut(s) 19, 51
AluBI AGCT 4 cut(s) 46, 68, 524, 671
AluI AGCT 4 cut(s) 46, 68, 524, 671
Alw21I GWGCWC 1 cut(s) 782
Alw26I GTCTC 3 cut(s) 543, 748, 1007
AlwI GGATC 2 cut(s) 93, 106
Ama87I CYCGRG 1 cut(s) 631
ApeKI GCWGC 6 cut(s) 380, 479, 524, 668, 707, 710
ApoI RAATTY 3 cut(s) 265, 449, 1268
AspLEI GCGC 2 cut(s) 371, 491
AspS9I GGNCC 3 cut(s) 350, 427, 1166
AsuHPI GGTGA 5 cut(s) 118, 146, 175, 583, 881
AvaI CYCGRG 1 cut(s) 631
AvaII GGWCC 3 cut(s) 350, 427, 1166
BamHI GGATCC 1 cut(s) 98
BanI GGYRCC 1 cut(s) 1147
BanII GRGCYC 1 cut(s) 37
BbsI GAAGAC 1 cut(s) 542
Bbv12I GWGCWC 1 cut(s) 782
BbvI GCAGC 6 cut(s) 367, 466, 511, 680, 694, 697
BccI CCATC 3 cut(s) 174, 178, 539
BcgI CGANNNNNNTGC 2 cut(s) 689, 723
BciT130I CCWGG 4 cut(s) 31, 89, 861, 920
BciVI GTATCC 1 cut(s) 918
BcoDI GTCTC 3 cut(s) 543, 748, 1007
BfmI CTRYAG 1 cut(s) 642
BfoI RGCGCY 1 cut(s) 492
BfuI GTATCC 1 cut(s) 918
BisI GCNGC 7 cut(s) 381, 480, 509, 525, 669, 708, 711
BlsI GCNGC 7 cut(s) 382, 481, 510, 526, 670, 709, 712
BmcAI AGTACT 1 cut(s) 653
Bme1390I CCNGG 4 cut(s) 31, 89, 861, 920
Bme18I GGWCC 3 cut(s) 350, 427, 1166
BmeT110I CYCGRG 1 cut(s) 631
BmgT120I GGNCC 3 cut(s) 350, 427, 1166
BmiI GGNNCC 6 cut(s) 28, 36, 86, 100, 428, 1149
BmrFI CCNGG 4 cut(s) 31, 89, 861, 920
BmsI GCATC 5 cut(s) 294, 388, 429, 491, 742
BpiI GAAGAC 1 cut(s) 542
BpmI CTGGAG 1 cut(s) 735
Bpu10I CCTNAGC 1 cut(s) 1170
BpuEI CTTGAG 1 cut(s) 68
BsaBI GATNNNNATC 1 cut(s) 1013
BsaI GGTCTC 1 cut(s) 1007
BsaJI CCNNGG 5 cut(s) 30, 88, 859, 1072, 1182
BsaWI WCCGGW 1 cut(s) 881
BsaXI ACNNNNNCTCC 2 cut(s) 19, 49
Bsc4I CCNNNNNNNGG 6 cut(s) 94, 261, 359, 507, 664, 919
Bse1I ACTGG 3 cut(s) 457, 892, 1247
Bse3DI GCAATG 1 cut(s) 933
Bse8I GATNNNNATC 1 cut(s) 1013
BseBI CCWGG 4 cut(s) 31, 89, 861, 920
BseDI CCNNGG 5 cut(s) 30, 88, 859, 1072, 1182
BseGI GGATG 4 cut(s) 166, 325, 453, 1086
BseJI GATNNNNATC 1 cut(s) 1013
BseLI CCNNNNNNNGG 6 cut(s) 94, 261, 359, 507, 664, 919
BseMI GCAATG 1 cut(s) 933
BseMII CTCAG 1 cut(s) 1161
BseNI ACTGG 3 cut(s) 457, 892, 1247
BseRI GAGGAG 1 cut(s) 357
BseXI GCAGC 6 cut(s) 367, 466, 511, 680, 694, 697
BseYI CCCAGC 1 cut(s) 94
Bsh1236I CGCG 2 cut(s) 175, 955
BshNI GGYRCC 1 cut(s) 1147
BsiHKAI GWGCWC 1 cut(s) 782
BsiHKCI CYCGRG 1 cut(s) 631
BsiSI CCGG 2 cut(s) 501, 882
BslFI GGGAC 4 cut(s) 69, 440, 574, 913
BslI CCNNNNNNNGG 6 cut(s) 94, 261, 359, 507, 664, 919
BsmAI GTCTC 3 cut(s) 543, 748, 1007
BsmFI GGGAC 4 cut(s) 69, 440, 574, 913
Bso31I GGTCTC 1 cut(s) 1007
BsoBI CYCGRG 1 cut(s) 631
Bsp1286I GDGCHC 2 cut(s) 37, 782
Bsp1407I TGTACA 1 cut(s) 930
Bsp143I GATC 4 cut(s) 98, 700, 984, 1083
Bsp68I TCGCGA 1 cut(s) 955
BspACI CCGC 8 cut(s) 175, 262, 335, 339, 470, 508, 658, 696
BspCNI CTCAG 1 cut(s) 1162
BspFNI CGCG 2 cut(s) 175, 955
BspHI TCATGA 2 cut(s) 541, 1137
BspLI GGNNCC 6 cut(s) 28, 36, 86, 100, 428, 1149
BspPI GGATC 2 cut(s) 93, 106
BspT107I GGYRCC 1 cut(s) 1147
BspTNI GGTCTC 1 cut(s) 1007
BsrBI CCGCTC 1 cut(s) 660
BsrDI GCAATG 1 cut(s) 933
BsrGI TGTACA 1 cut(s) 930
BsrI ACTGG 3 cut(s) 457, 892, 1247
BssECI CCNNGG 5 cut(s) 30, 88, 859, 1072, 1182
BssMI GATC 4 cut(s) 98, 700, 984, 1083
BssT1I CCWWGG 2 cut(s) 1072, 1182
Bst2UI CCWGG 4 cut(s) 31, 89, 861, 920
Bst4CI ACNGT 6 cut(s) 60, 119, 201, 691, 1129, 1144
Bst6I CTCTTC 2 cut(s) 290, 1037
BstAPI GCANNNNNTGC 2 cut(s) 227, 377
BstAUI TGTACA 1 cut(s) 930
BstC8I GCNNGC 2 cut(s) 337, 506
BstDEI CTNAG 2 cut(s) 1102, 1170
BstF5I GGATG 4 cut(s) 166, 325, 453, 1086
BstFNI CGCG 2 cut(s) 175, 955
BstH2I RGCGCY 1 cut(s) 492
BstHHI GCGC 2 cut(s) 371, 491
BstKTI GATC 4 cut(s) 101, 703, 987, 1086
BstMAI GTCTC 3 cut(s) 543, 748, 1007
BstMBI GATC 4 cut(s) 98, 700, 984, 1083
BstMWI GCNNNNNNNGC 6 cut(s) 227, 332, 377, 476, 488, 704
BstNI CCWGG 4 cut(s) 31, 89, 861, 920
BstNSI RCATGY 1 cut(s) 375
BstSCI CCNGG 4 cut(s) 29, 87, 859, 918
BstSFI CTRYAG 1 cut(s) 642
BstUI CGCG 2 cut(s) 175, 955
BstV1I GCAGC 6 cut(s) 367, 466, 511, 680, 694, 697
BstV2I GAAGAC 1 cut(s) 542
BstX2I RGATCY 1 cut(s) 98
BstYI RGATCY 1 cut(s) 98
BsuI GTATCC 1 cut(s) 918
BtgZI GCGATG 1 cut(s) 156
BtsCI GGATG 4 cut(s) 166, 325, 453, 1086
BtsIMutI CAGTG 2 cut(s) 1125, 1149
BtuMI TCGCGA 1 cut(s) 955
Cac8I GCNNGC 2 cut(s) 337, 506
CciI TCATGA 2 cut(s) 541, 1137
CfoI GCGC 2 cut(s) 371, 491
Cfr13I GGNCC 3 cut(s) 350, 427, 1166
CseI GACGC 1 cut(s) 431
Csp6I GTAC 4 cut(s) 652, 931, 1045, 1063
CspCI CAANNNNNGTGG 1 cut(s) 30
CviAII CATG 6 cut(s) 10, 236, 372, 542, 903, 1138
CviQI GTAC 4 cut(s) 652, 931, 1045, 1063
DdeI CTNAG 2 cut(s) 1102, 1170
DpnI GATC 4 cut(s) 100, 702, 986, 1085
DpnII GATC 4 cut(s) 98, 700, 984, 1083
DrdI GACNNNNNNGTC 1 cut(s) 740
DseDI GACNNNNNNGTC 1 cut(s) 740
Eam1104I CTCTTC 2 cut(s) 290, 1037
EarI CTCTTC 2 cut(s) 290, 1037
EciI GGCGGA 1 cut(s) 354
Eco130I CCWWGG 2 cut(s) 1072, 1182
Eco24I GRGCYC 1 cut(s) 37
Eco31I GGTCTC 1 cut(s) 1007
Eco32I GATATC 1 cut(s) 951
Eco47I GGWCC 3 cut(s) 350, 427, 1166
Eco57I CTGAAG 1 cut(s) 1001
Eco88I CYCGRG 1 cut(s) 631
EcoO109I RGGNCCY 1 cut(s) 427
EcoRI GAATTC 1 cut(s) 449
EcoRII CCWGG 4 cut(s) 29, 87, 859, 918
EcoRV GATATC 1 cut(s) 951
EcoT14I CCWWGG 2 cut(s) 1072, 1182
EcoT22I ATGCAT 1 cut(s) 622
EcoT38I GRGCYC 1 cut(s) 37
ErhI CCWWGG 2 cut(s) 1072, 1182
FaeI CATG 6 cut(s) 13, 239, 375, 545, 906, 1141
FaqI GGGAC 4 cut(s) 69, 440, 574, 913
FatI CATG 6 cut(s) 9, 235, 371, 541, 902, 1137
FauI CCCGC 3 cut(s) 168, 328, 463
Fnu4HI GCNGC 7 cut(s) 381, 480, 509, 525, 669, 708, 711
FokI GGATG 4 cut(s) 153, 332, 440, 1093
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 7 cut(s) 381, 480, 509, 525, 669, 708, 711
FspAI RTGCGCAY 1 cut(s) 370
FspI TGCGCA 1 cut(s) 370
GlaI GCGC 2 cut(s) 370, 490
GluI GCNGC 7 cut(s) 381, 480, 509, 525, 669, 708, 711
GsaI CCCAGC 1 cut(s) 98
GsuI CTGGAG 1 cut(s) 735
HaeII RGCGCY 1 cut(s) 492
HapII CCGG 2 cut(s) 501, 882
HgaI GACGC 1 cut(s) 431
HhaI GCGC 2 cut(s) 371, 491
Hin1II CATG 6 cut(s) 13, 239, 375, 545, 906, 1141
Hin6I GCGC 2 cut(s) 369, 489
HinP1I GCGC 2 cut(s) 369, 489
HincII GTYRAC 1 cut(s) 250
HindII GTYRAC 1 cut(s) 250
HindIII AAGCTT 2 cut(s) 44, 66
HinfI GANTC 2 cut(s) 717, 989
HpaII CCGG 2 cut(s) 501, 882
HphI GGTGA 5 cut(s) 118, 146, 175, 583, 881
Hpy166II GTNNAC 1 cut(s) 250
Hpy188I TCNGA 3 cut(s) 159, 676, 831
Hpy188III TCNNGA 8 cut(s) 446, 542, 574, 631, 954, 993, 1006, 1138
Hpy8I GTNNAC 1 cut(s) 250
HpyAV CCTTC 2 cut(s) 472, 671
HpyCH4III ACNGT 6 cut(s) 60, 119, 201, 691, 1129, 1144
HpyCH4IV ACGT 1 cut(s) 405
HpyF10VI GCNNNNNNNGC 6 cut(s) 227, 332, 377, 476, 488, 704
HpyF3I CTNAG 2 cut(s) 1102, 1170
HpySE526I ACGT 1 cut(s) 405
Hsp92II CATG 6 cut(s) 13, 239, 375, 545, 906, 1141
HspAI GCGC 2 cut(s) 369, 489
Kzo9I GATC 4 cut(s) 98, 700, 984, 1083
LmnI GCTCC 1 cut(s) 40
Lsp1109I GCAGC 6 cut(s) 367, 466, 511, 680, 694, 697
LweI GCATC 5 cut(s) 294, 388, 429, 491, 742
MaeII ACGT 1 cut(s) 405
MaeIII GTNAC 1 cut(s) 691
MalI GATC 4 cut(s) 100, 702, 986, 1085
MbiI CCGCTC 1 cut(s) 660
MboI GATC 4 cut(s) 98, 700, 984, 1083
MboII GAAGA 7 cut(s) 277, 280, 542, 602, 847, 994, 1024
MflI RGATCY 1 cut(s) 98
MhlI GDGCHC 2 cut(s) 37, 782
MluCI AATT 6 cut(s) 265, 270, 312, 449, 579, 1268
MlyI GAGTC 2 cut(s) 726, 998
MmeI TCCRAC 4 cut(s) 182, 328, 791, 921
MnlI CCTC 7 cut(s) 10, 302, 335, 508, 977, 1040, 1208
Mph1103I ATGCAT 1 cut(s) 622
MseI TTAA 3 cut(s) 41, 269, 1109
MslI CAYNNNNRTG 1 cut(s) 1142
MspI CCGG 2 cut(s) 501, 882
MspR9I CCNGG 4 cut(s) 31, 89, 861, 920
MvaI CCWGG 4 cut(s) 31, 89, 861, 920
MvnI CGCG 2 cut(s) 175, 955
MwoI GCNNNNNNNGC 6 cut(s) 227, 332, 377, 476, 488, 704
NdeII GATC 4 cut(s) 98, 700, 984, 1083
NlaIII CATG 6 cut(s) 13, 239, 375, 545, 906, 1141
NlaIV GGNNCC 6 cut(s) 28, 36, 86, 100, 428, 1149
NruI TCGCGA 1 cut(s) 955
NsbI TGCGCA 1 cut(s) 370
NsiI ATGCAT 1 cut(s) 622
NspI RCATGY 1 cut(s) 375
PagI TCATGA 2 cut(s) 541, 1137
PkrI GCNGC 7 cut(s) 382, 481, 510, 526, 670, 709, 712
PleI GAGTC 2 cut(s) 725, 997
PpsI GAGTC 2 cut(s) 725, 997
PpuMI RGGWCCY 1 cut(s) 427
PsiI TTATAA 2 cut(s) 212, 311
Psp5II RGGWCCY 1 cut(s) 427
Psp6I CCWGG 4 cut(s) 29, 87, 859, 918
PspFI CCCAGC 1 cut(s) 94
PspGI CCWGG 4 cut(s) 29, 87, 859, 918
PspN4I GGNNCC 6 cut(s) 28, 36, 86, 100, 428, 1149
PspPI GGNCC 3 cut(s) 350, 427, 1166
PspPPI RGGWCCY 1 cut(s) 427
PsuI RGATCY 1 cut(s) 98
RruI TCGCGA 1 cut(s) 955
RsaI GTAC 4 cut(s) 653, 932, 1046, 1064
RsaNI GTAC 4 cut(s) 652, 931, 1045, 1063
RseI CAYNNNNRTG 1 cut(s) 1142
SaqAI TTAA 3 cut(s) 41, 269, 1109
SatI GCNGC 7 cut(s) 381, 480, 509, 525, 669, 708, 711
Sau3AI GATC 4 cut(s) 98, 700, 984, 1083
Sau96I GGNCC 3 cut(s) 350, 427, 1166
ScaI AGTACT 1 cut(s) 653
SchI GAGTC 2 cut(s) 726, 998
ScrFI CCNGG 4 cut(s) 31, 89, 861, 920
SduI GDGCHC 2 cut(s) 37, 782
SfaNI GCATC 5 cut(s) 294, 388, 429, 491, 742
SfcI CTRYAG 1 cut(s) 642
SinI GGWCC 3 cut(s) 350, 427, 1166
SmiMI CAYNNNNRTG 1 cut(s) 1142
SmlI CTYRAG 1 cut(s) 47
SmoI CTYRAG 1 cut(s) 47
Sse9I AATT 6 cut(s) 265, 270, 312, 449, 579, 1268
SsiI CCGC 8 cut(s) 175, 262, 335, 339, 470, 508, 658, 696
StyD4I CCNGG 4 cut(s) 29, 87, 859, 918
StyI CCWWGG 2 cut(s) 1072, 1182
TaaI ACNGT 6 cut(s) 60, 119, 201, 691, 1129, 1144
TaiI ACGT 1 cut(s) 408
TaqI TCGA 2 cut(s) 772, 987
TasI AATT 6 cut(s) 265, 270, 312, 449, 579, 1268
TatI WGTACW 2 cut(s) 651, 930
TauI GCSGC 1 cut(s) 511
Tru1I TTAA 3 cut(s) 41, 269, 1109
Tru9I TTAA 3 cut(s) 41, 269, 1109
TscAI CASTG 2 cut(s) 1132, 1149
TseI GCWGC 6 cut(s) 380, 479, 524, 668, 707, 710
TspDTI ATGAA 3 cut(s) 252, 442, 856
TspGWI ACGGA 1 cut(s) 1179
TspRI CASTG 2 cut(s) 1132, 1149
VpaK11BI GGWCC 3 cut(s) 350, 427, 1166
XapI RAATTY 3 cut(s) 265, 449, 1268
XceI RCATGY 1 cut(s) 375
XcmI CCANNNNNNNNNTGG 1 cut(s) 410
ZrmI AGTACT 1 cut(s) 653
Zsp2I ATGCAT 1 cut(s) 622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.