DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G69770 |
| fragaria_vesca | FvH4_1g00970 FvH4_2g39560 FvH4_2g39560 FvH4_2g39560 |
| malus_domestica | MD03G1011100.v1.1 MD03G1011200.v1.1 MD11G1012800.v1.1 MD11G1013000.v1.1 MD11G1013100.v1.1 MD11G1013200.v1.1 MD11G1013700.v1.1 |
| prunus_persica | Prupe.6G011600_v2.0.a1 Prupe.6G011600_v2.0.a1 |
| pyrus_communis | pycom03g00990 pycom11g00840 pycom11g00870 pycom11g00900 |
| rosa_chinensis | RchiOBHm_Chr2g0085701 RchiOBHm_Chr4g0398431 RchiOBHm_Chr4g0444071 |
| rosa_laevigata | RLG00000005861 RLG00000009362 RLG00000015713 |
| rosa_multiflora | Rmu_co8144248.1_g000001 Rmu_sc0009759.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00155110 Rroxscaffold_5G00343400 Rroxscaffold_5G00384620 |
| rosa_rugosa | Rorug01G0462700 Rorug04G0007900 Rorug04G0349300 Rorug04G0349400 |
| rosa_samantha | Rh2AG011600 Rh2BG012200 Rh2CG013000 Rh2DG014000 Rh4AG086100 Rh4AG410100 Rh4BG083000 Rh4BG421200 Rh4CG093900 Rh4CG435600 Rh4DG077800 Rh4DG416500 |
| rosa_wichuraiana | Rw2G001030 Rw4G007200 Rw4G035230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 3 cut(s) | 7, 17, 41 |
| AluBI | AGCT | 1 cut(s) | 44 |
| AluI | AGCT | 1 cut(s) | 44 |
| Alw26I | GTCTC | 1 cut(s) | 113 |
| BccI | CCATC | 1 cut(s) | 68 |
| BcoDI | GTCTC | 1 cut(s) | 113 |
| BmiI | GGNNCC | 1 cut(s) | 132 |
| BmsI | GCATC | 1 cut(s) | 91 |
| BseGI | GGATG | 1 cut(s) | 79 |
| BsgI | GTGCAG | 1 cut(s) | 177 |
| BsmAI | GTCTC | 1 cut(s) | 113 |
| BsmBI | CGTCTC | 1 cut(s) | 113 |
| Bsp143I | GATC | 1 cut(s) | 88 |
| BspLI | GGNNCC | 1 cut(s) | 132 |
| BssMI | GATC | 1 cut(s) | 88 |
| BstF5I | GGATG | 1 cut(s) | 79 |
| BstKTI | GATC | 1 cut(s) | 91 |
| BstMAI | GTCTC | 1 cut(s) | 113 |
| BstMBI | GATC | 1 cut(s) | 88 |
| BtsCI | GGATG | 1 cut(s) | 79 |
| BtsIMutI | CAGTG | 1 cut(s) | 28 |
| CviAII | CATG | 1 cut(s) | 107 |
| CviJI | RGCY | 1 cut(s) | 44 |
| CviKI_1 | RGCY | 1 cut(s) | 44 |
| DpnI | GATC | 1 cut(s) | 90 |
| DpnII | GATC | 1 cut(s) | 88 |
| Esp3I | CGTCTC | 1 cut(s) | 113 |
| FaeI | CATG | 1 cut(s) | 110 |
| FaiI | YATR | 7 cut(s) | 11, 35, 87, 96, 108, 179, 184 |
| FatI | CATG | 1 cut(s) | 106 |
| FokI | GGATG | 1 cut(s) | 86 |
| Hin1II | CATG | 1 cut(s) | 110 |
| HinfI | GANTC | 1 cut(s) | 78 |
| Hpy99I | CGWCG | 1 cut(s) | 51 |
| HpyCH4V | TGCA | 2 cut(s) | 112, 194 |
| Hsp92II | CATG | 1 cut(s) | 110 |
| Kzo9I | GATC | 1 cut(s) | 88 |
| LweI | GCATC | 1 cut(s) | 91 |
| MaeIII | GTNAC | 1 cut(s) | 50 |
| MalI | GATC | 1 cut(s) | 90 |
| MboI | GATC | 1 cut(s) | 88 |
| MboII | GAAGA | 1 cut(s) | 41 |
| MfeI | CAATTG | 1 cut(s) | 168 |
| MluCI | AATT | 3 cut(s) | 12, 36, 168 |
| MnlI | CCTC | 2 cut(s) | 121, 157 |
| MunI | CAATTG | 1 cut(s) | 168 |
| NdeII | GATC | 1 cut(s) | 88 |
| NlaIII | CATG | 1 cut(s) | 110 |
| NlaIV | GGNNCC | 1 cut(s) | 132 |
| NmuCI | GTSAC | 1 cut(s) | 50 |
| PfeI | GAWTC | 1 cut(s) | 78 |
| PspN4I | GGNNCC | 1 cut(s) | 132 |
| Sau3AI | GATC | 1 cut(s) | 88 |
| SetI | ASST | 1 cut(s) | 46 |
| SfaNI | GCATC | 1 cut(s) | 91 |
| SgeI | CNNG | 4 cut(s) | 53, 57, 119, 125 |
| Sse9I | AATT | 3 cut(s) | 12, 36, 168 |
| TasI | AATT | 3 cut(s) | 12, 36, 168 |
| TfiI | GAWTC | 1 cut(s) | 78 |
| TscAI | CASTG | 1 cut(s) | 28 |
| TseFI | GTSAC | 1 cut(s) | 50 |
| Tsp45I | GTSAC | 1 cut(s) | 50 |
| TspDTI | ATGAA | 1 cut(s) | 42 |
| TspRI | CASTG | 1 cut(s) | 28 |