Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001701

Physical Location & Seq

Genomic Coordinates Forward (+)

12867679 .. 12875880

Gene Structure 8202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00343400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGCCCACCAAGCGGAAGACGAGGTCGCTTTCGGCCTCGGCATCGTCTTCTGATTCGAAGAAGGGCGAGCAAACCAATCAGCAGCAGAAGTTAACCAGGAGAGCTGTTGGAGATGGTGACGGCCCGGAGCCCAAGTTCATCGGCCCACCGCTTCAAGACGACGACGCTCGCAAGCGATGGCCCAAGAGCTACGCCGACAAGAAGATGCAGGTATCTGGGCTAAATGGTACAAACAAAGATGAAAATTCTGTCCAAGCTAGGTGTCACTATGCCAAAGCAGAGGTGGATGGAATTGGTTACGATCTATATGATGACGCTCATGTAAAAGCAAGTGAGGGAGAAGAACCCTACATTTGTAAGGTTCTAGAATTTTTCACTGCAATTGATGGATCAATGTATTTTACTGCACAATGGTACTACCGAGCGCGAGATACTGTCATAAAAGATTGTGCTGTTCGGAATGAATCTGCCGAAGATTTTCTTTCATTGCTAAAACAATGGGAACAACTCTGCATCTGTTTTAACTTTGTCGGAACAAATAAGTCAGAGAAGCATGGGTTCAATTTCTTCTTTAAAACAGAAGATACTGAAGATGAAGATGAAATAATTGGCACTGATAATGAAGCTTCGGAAGTCTATGAAGTAGCACAAGTACTAGAAATATGTTATGGTGATCCCAACCATATCAAAGAGAGTGGATTGTACTGTAAGATCCGGTGGAAGGGCTATGGTGCTGATGAGGACACCTGGGAGCCTATTGAGGAACTGAGTCATTGTAAAGAGCGGGTACAAGAGTTTGTTTCTCAGGGTTATTCATCAAACCTATTGCCCTTACCTGGTGATGTGGATGTGATCTGTGGTGGACCACCATGCCAAGGAATAAGTGGATTTAACAGGTTTAGGAACGAAGAAGATCCGTTGGATGATGAAAAAAACAAACAATTGAAAGTTTTCATGGATTTAGTTCAATACCTTAAGCCCAAGCACGTTTTAATGGAAAATGTGGTTGACCTCGTGAAATTTGCTGATGGGTTCCTTGGTCGTTATGCATTGGGACGTCTTGTTCACATGAACTATCAAGCAAGGATGGGCATCATGGCAGCTGGGGCATATGGACTTCCGCAGTTTCGTTTGCGTATCTTTATGTGGGGAGCCCGGCCTACTGAGAGGTTGCCTCAATATCCATATCCGACACATGATGTCGTAGTAAGGGGTTGTATACCTACTGAATTTGAGAGAAATACTGTCGCTTATGATGAAGGTCATAATGTCAAACTAGAGAAAAAGCTCTTCCTGGCAGATGCGATTTCTGATCTTCCCCCTGTTGAGAATAGTGAAAACCAGGATGAAATGCCCTACGGGGAACCTCCCCAAACAGATTTTCAGAAGTGTATCAGACTCAGCAAGAATTATATGCTGCAGCTTTCAGTCAGTGAACCCTGGAATGAGACGCTATATGATCATCGTCCGTTAAAGCTGAACGAAGATGATTATGCACGTGTCTGCCTAGTACCTAAGAAAAAGGGTGGGAACTTTAGAGATCTACTAGGTGTTCATGTGCGTGGTGGTGTAGTGGAGTGGGATCCTGATGTAGACAGAGAGTATTTGGATTCGGGGAAACCATTGGTACCTAATTATGCTGTGAGTTTCAGGAATGGGACTTCAAAAAAGCCTTTTGCTCGGTTGTGGTGGGATGAGACTGTACCAACAGTTGTTACACGGGCTGAGCCACATAATCAGGCGATTCTGCATCCTGAACAAGATAGAGTGTTGTCAATTCGTGAGAATGCACGTCTACAAGGCTTTCCAGACTACTATAAGCTTAGTGGCCCAGTAAAGCAGAGGTACATTCAAGTAGGCAATGCTGTTGCAGTTCCCGTTTCAAGGTCATTAGGATACGCATTAGGTCGTGCGGTTAGGGGTATCTCGGACGATGAACCACTATTTACTTTGCCTGAGAAGTTCCCTTACCCTCCGGAGCAGATTCCTCTTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko05206 map00270 map01100 map05206

Pfam Domains

Protein Families

BAH Chromo DNA_methylase

Protein Analysis

665

Amino Acids

75.75

Weight (kDa)

5.34

Isoelectric Point (pI)

39.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chromo	PF00385	213 - 268	8.9e-10	Chromo (CHRromatin Organisation MOdifier) domain
DNA_methylase	PF00145	278 - 635	2.2e-32	C-5 cytosine-specific DNA methylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69770
fragaria_vesca	FvH4_1g00970 FvH4_2g39560 FvH4_2g39560 FvH4_2g39560
malus_domestica	MD03G1011100.v1.1 MD03G1011200.v1.1 MD11G1012800.v1.1 MD11G1013000.v1.1 MD11G1013100.v1.1 MD11G1013200.v1.1 MD11G1013700.v1.1
prunus_persica	Prupe.6G011600_v2.0.a1 Prupe.6G011600_v2.0.a1
pyrus_communis	pycom03g00990 pycom11g00840 pycom11g00870 pycom11g00900
rosa_chinensis	RchiOBHm_Chr2g0085701 RchiOBHm_Chr4g0398431 RchiOBHm_Chr4g0444071
rosa_laevigata	RLG00000005861 RLG00000009362 RLG00000015713
rosa_multiflora	Rmu_co8144248.1_g000001 Rmu_sc0009759.1_g000011
rosa_roxburghii	Rroxscaffold_2G00155110 Rroxscaffold_5G00343400 Rroxscaffold_5G00384620
rosa_rugosa	Rorug01G0462700 Rorug04G0007900 Rorug04G0349300 Rorug04G0349400
rosa_samantha	Rh2AG011600 Rh2BG012200 Rh2CG013000 Rh2DG014000 Rh4AG086100 Rh4AG410100 Rh4BG083000 Rh4BG421200 Rh4CG093900 Rh4CG435600 Rh4DG077800 Rh4DG416500
rosa_wichuraiana	Rw2G001030 Rw4G007200 Rw4G035230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1060
Acc36I	ACCTGC	1 cut(s)	199
Acc65I	GGTACC	1 cut(s)	1627
AccB1I	GGYRCC	1 cut(s)	1627
AccBSI	CCGCTC	1 cut(s)	784
AccI	GTMKAC	3 cut(s)	1219, 1593, 1795
AccII	CGCG	1 cut(s)	427
AccIII	TCCGGA	1 cut(s)	1975
AciI	CCGC	5 cut(s)	13, 149, 784, 1121, 1913
AclWI	GGATC	6 cut(s)	397, 668, 706, 908, 1577, 1590
AcsI	RAATTY	4 cut(s)	244, 368, 1019, 1229
AcuI	CTGAAG	1 cut(s)	609
AcvI	CACGTG	1 cut(s)	1499
AcyI	GRCGYC	1 cut(s)	1057
AfaI	GTAC	9 cut(s)	229, 416, 654, 704, 789, 1512, 1629, 1704, 1847
AfiI	CCNNNNNNNGG	5 cut(s)	12, 721, 836, 875, 1884
AflII	CTTAAG	1 cut(s)	974
AflIII	ACRYGT	1 cut(s)	1498
AgsI	TTSAA	7 cut(s)	155, 562, 946, 968, 1665, 1853, 1884
AjiI	CACGTC	1 cut(s)	1793
AjnI	CCWGG	6 cut(s)	95, 746, 835, 1293, 1341, 1439
AjuI	GAANNNNNNNTTGG	2 cut(s)	1365, 1397
AloI	GAACNNNNNNTCC	4 cut(s)	119, 151, 1047, 1079
AluBI	AGCT	9 cut(s)	104, 189, 257, 626, 1103, 1288, 1423, 1477, 1822
AluI	AGCT	9 cut(s)	104, 189, 257, 626, 1103, 1288, 1423, 1477, 1822
Alw26I	GTCTC	2 cut(s)	1442, 1691
AlwI	GGATC	6 cut(s)	397, 668, 706, 908, 1577, 1590
Aor13HI	TCCGGA	1 cut(s)	1975
AoxI	GGCC	6 cut(s)	33, 121, 142, 179, 1157, 1828
ApeKI	GCWGC	4 cut(s)	82, 1100, 1417, 1420
ApoI	RAATTY	4 cut(s)	244, 368, 1019, 1229
Asp700I	GAANNNNTTC	2 cut(s)	477, 950
Asp718I	GGTACC	1 cut(s)	1627
AspLEI	GCGC	1 cut(s)	427
AspS9I	GGNCC	5 cut(s)	122, 143, 180, 863, 1829
AsuC2I	CCSGG	2 cut(s)	125, 1156
AsuHPI	GGTGA	3 cut(s)	128, 683, 851
AsuII	TTCGAA	1 cut(s)	56
AvaII	GGWCC	1 cut(s)	863
BaeI	ACNNNNGTAYC	2 cut(s)	779, 812
BamHI	GGATCC	1 cut(s)	1582
BanI	GGYRCC	1 cut(s)	1627
BanII	GRGCYC	2 cut(s)	132, 1156
BarI	GAAGNNNNNNTAC	2 cut(s)	1952, 1984
BauI	CACGAG	1 cut(s)	1013
BbrPI	CACGTG	1 cut(s)	1499
BbsI	GAAGAC	2 cut(s)	23, 39
BbvI	GCAGC	4 cut(s)	94, 1112, 1404, 1432
BccI	CCATC	6 cut(s)	107, 171, 281, 380, 1022, 1081
BceAI	ACGGC	1 cut(s)	136
BciT130I	CCWGG	6 cut(s)	97, 748, 837, 1295, 1343, 1441
BciVI	GTATCC	1 cut(s)	1889
BclI	TGATCA	1 cut(s)	1459
BcnI	CCSGG	2 cut(s)	125, 1156
BcoDI	GTCTC	2 cut(s)	1442, 1691
BfaI	CTAG	6 cut(s)	258, 365, 656, 1277, 1508, 1547
BfmI	CTRYAG	1 cut(s)	1418
BfrI	CTTAAG	1 cut(s)	974
BfuAI	ACCTGC	1 cut(s)	199
BfuI	GTATCC	1 cut(s)	1889
BglII	AGATCT	1 cut(s)	1540
BisI	GCNGC	4 cut(s)	83, 1101, 1418, 1421
BlpI	GCTNAGC	1 cut(s)	1725
BlsI	GCNGC	4 cut(s)	84, 1102, 1419, 1422
BmcAI	AGTACT	1 cut(s)	654
Bme1390I	CCNGG	8 cut(s)	97, 125, 748, 837, 1156, 1295, 1343, 1441
Bme18I	GGWCC	1 cut(s)	863
BmgBI	CACGTC	1 cut(s)	1793
BmgT120I	GGNCC	5 cut(s)	122, 143, 180, 863, 1829
BmiI	GGNNCC	7 cut(s)	129, 753, 1034, 1153, 1365, 1584, 1629
BmrFI	CCNGG	8 cut(s)	97, 125, 748, 837, 1156, 1295, 1343, 1441
BmrI	ACTGGG	1 cut(s)	1826
BmsI	GCATC	6 cut(s)	50, 195, 522, 1101, 1291, 1759
BmuI	ACTGGG	1 cut(s)	1826
BpiI	GAAGAC	2 cut(s)	23, 39
BplI	GAGNNNNNCTC	2 cut(s)	1159, 1191
Bpu1102I	GCTNAGC	1 cut(s)	1725
Bpu14I	TTCGAA	1 cut(s)	56
BpuMI	CCSGG	2 cut(s)	125, 1156
BsaAI	YACGTR	1 cut(s)	1499
BsaBI	GATNNNNATC	1 cut(s)	1091
BsaHI	GRCGYC	1 cut(s)	1057
BsaJI	CCNNGG	5 cut(s)	36, 747, 874, 1036, 1439
BsaWI	WCCGGW	2 cut(s)	714, 1975
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bsc4I	CCNNNNNNNGG	5 cut(s)	12, 721, 836, 875, 1884
Bse1I	ACTGG	1 cut(s)	1832
Bse3DI	GCAATG	2 cut(s)	485, 1867
Bse8I	GATNNNNATC	1 cut(s)	1091
BseAI	TCCGGA	1 cut(s)	1975
BseBI	CCWGG	6 cut(s)	97, 748, 837, 1295, 1343, 1441
BseDI	CCNNGG	5 cut(s)	36, 747, 874, 1036, 1439
BseGI	GGATG	7 cut(s)	292, 853, 928, 1092, 1351, 1699, 1750
BseJI	GATNNNNATC	1 cut(s)	1091
BseLI	CCNNNNNNNGG	5 cut(s)	12, 721, 836, 875, 1884
BseMI	GCAATG	2 cut(s)	485, 1867
BseMII	CTCAG	6 cut(s)	758, 818, 1155, 1414, 1716, 1947
BseNI	ACTGG	1 cut(s)	1832
BseXI	GCAGC	4 cut(s)	94, 1112, 1404, 1432
BseYI	CCCAGC	1 cut(s)	1103
BsgI	GTGCAG	1 cut(s)	390
Bsh1236I	CGCG	1 cut(s)	427
BshFI	GGCC	6 cut(s)	35, 123, 144, 181, 1159, 1830
BshNI	GGYRCC	1 cut(s)	1627
BsiSI	CCGG	4 cut(s)	125, 715, 1156, 1976
BslFI	GGGAC	2 cut(s)	1068, 1672
BslI	CCNNNNNNNGG	5 cut(s)	12, 721, 836, 875, 1884
BsmAI	GTCTC	2 cut(s)	1442, 1691
BsmBI	CGTCTC	1 cut(s)	1442
BsmFI	GGGAC	2 cut(s)	1068, 1672
BsmI	GAATGC	1 cut(s)	1792
BsnI	GGCC	6 cut(s)	35, 123, 144, 181, 1159, 1830
Bsp119I	TTCGAA	1 cut(s)	56
Bsp1286I	GDGCHC	2 cut(s)	132, 1156
Bsp13I	TCCGGA	1 cut(s)	1975
Bsp1720I	GCTNAGC	1 cut(s)	1725
BspACI	CCGC	5 cut(s)	13, 149, 784, 1121, 1913
BspANI	GGCC	6 cut(s)	35, 123, 144, 181, 1159, 1830
BspCNI	CTCAG	6 cut(s)	759, 817, 1156, 1413, 1717, 1948
BspEI	TCCGGA	1 cut(s)	1975
BspFNI	CGCG	1 cut(s)	427
BspLI	GGNNCC	7 cut(s)	129, 753, 1034, 1153, 1365, 1584, 1629
BspMAI	CTGCAG	1 cut(s)	1422
BspMI	ACCTGC	1 cut(s)	199
BspPI	GGATC	6 cut(s)	397, 668, 706, 908, 1577, 1590
BspQI	GCTCTTC	1 cut(s)	1295
BspT104I	TTCGAA	1 cut(s)	56
BspT107I	GGYRCC	1 cut(s)	1627
BspTI	CTTAAG	1 cut(s)	974
BsrBI	CCGCTC	1 cut(s)	784
BsrDI	GCAATG	2 cut(s)	485, 1867
BsrI	ACTGG	1 cut(s)	1832
BssECI	CCNNGG	5 cut(s)	36, 747, 874, 1036, 1439
BssNAI	GTATAC	1 cut(s)	1220
BssNI	GRCGYC	1 cut(s)	1057
BssSI	CACGAG	1 cut(s)	1013
BssT1I	CCWWGG	2 cut(s)	874, 1036
Bst1107I	GTATAC	1 cut(s)	1220
Bst2BI	CACGAG	1 cut(s)	1013
Bst2UI	CCWGG	6 cut(s)	97, 748, 837, 1295, 1343, 1441
Bst4CI	ACNGT	5 cut(s)	436, 707, 1246, 1702, 1711
Bst6I	CTCTTC	1 cut(s)	1295
BstACI	GRCGYC	1 cut(s)	1057
BstAFI	CTTAAG	1 cut(s)	974
BstBAI	YACGTR	1 cut(s)	1499
BstBI	TTCGAA	1 cut(s)	56
BstC8I	GCNNGC	3 cut(s)	68, 169, 173
BstDEI	CTNAG	8 cut(s)	767, 804, 1164, 1400, 1515, 1725, 1823, 1956
BstF5I	GGATG	7 cut(s)	292, 853, 928, 1092, 1351, 1699, 1750
BstFNI	CGCG	1 cut(s)	427
BstHHI	GCGC	1 cut(s)	427
BstMAI	GTCTC	2 cut(s)	1442, 1691
BstMWI	GCNNNNNNNGC	2 cut(s)	10, 1106
BstNI	CCWGG	6 cut(s)	97, 748, 837, 1295, 1343, 1441
BstSCI	CCNGG	8 cut(s)	95, 123, 746, 835, 1154, 1293, 1341, 1439
BstSFI	CTRYAG	1 cut(s)	1418
BstUI	CGCG	1 cut(s)	427
BstV1I	GCAGC	4 cut(s)	94, 1112, 1404, 1432
BstV2I	GAAGAC	2 cut(s)	23, 39
BstX2I	RGATCY	4 cut(s)	711, 913, 1540, 1582
BstYI	RGATCY	4 cut(s)	711, 913, 1540, 1582
BstZ17I	GTATAC	1 cut(s)	1220
BsuI	GTATCC	1 cut(s)	1889
BsuRI	GGCC	6 cut(s)	35, 123, 144, 181, 1159, 1830
BtgZI	GCGATG	1 cut(s)	190
BtrI	CACGTC	1 cut(s)	1793
BtsCI	GGATG	7 cut(s)	292, 853, 928, 1092, 1351, 1699, 1750
BtsI	GCAGTG	1 cut(s)	375
BtsIMutI	CAGTG	3 cut(s)	375, 612, 1438
BveI	ACCTGC	1 cut(s)	199
Cac8I	GCNNGC	3 cut(s)	68, 169, 173
CfoI	GCGC	1 cut(s)	427
Cfr13I	GGNCC	5 cut(s)	122, 143, 180, 863, 1829
CseI	GACGC	3 cut(s)	173, 323, 1459
CsiI	ACCWGGT	1 cut(s)	835
Csp6I	GTAC	9 cut(s)	228, 415, 653, 703, 788, 1511, 1628, 1703, 1846
CspCI	CAANNNNNGTGG	2 cut(s)	676, 711
CviAII	CATG	8 cut(s)	320, 554, 870, 955, 1069, 1096, 1196, 1556
CviQI	GTAC	9 cut(s)	228, 415, 653, 703, 788, 1511, 1628, 1703, 1846
DdeI	CTNAG	8 cut(s)	767, 804, 1164, 1400, 1515, 1725, 1823, 1956
DraI	TTTAAA	1 cut(s)	574
Eam1104I	CTCTTC	1 cut(s)	1295
EarI	CTCTTC	1 cut(s)	1295
Eco130I	CCWWGG	2 cut(s)	874, 1036
Eco24I	GRGCYC	2 cut(s)	132, 1156
Eco47I	GGWCC	1 cut(s)	863
Eco57I	CTGAAG	1 cut(s)	609
Eco72I	CACGTG	1 cut(s)	1499
EcoRII	CCWGG	6 cut(s)	95, 746, 835, 1293, 1341, 1439
EcoT14I	CCWWGG	2 cut(s)	874, 1036
EcoT22I	ATGCAT	1 cut(s)	1051
EcoT38I	GRGCYC	2 cut(s)	132, 1156
ErhI	CCWWGG	2 cut(s)	874, 1036
Esp3I	CGTCTC	1 cut(s)	1442
FaeI	CATG	8 cut(s)	323, 557, 873, 958, 1072, 1099, 1199, 1559
FalI	AAGNNNNNCTT	2 cut(s)	465, 497
FaqI	GGGAC	2 cut(s)	1068, 1672
FatI	CATG	8 cut(s)	319, 553, 869, 954, 1068, 1095, 1195, 1555
FauI	CCCGC	1 cut(s)	777
FauNDI	CATATG	1 cut(s)	1111
FbaI	TGATCA	1 cut(s)	1459
FblI	GTMKAC	3 cut(s)	1219, 1593, 1795
Fnu4HI	GCNGC	4 cut(s)	83, 1101, 1418, 1421
FokI	GGATG	7 cut(s)	299, 860, 935, 1099, 1358, 1706, 1737
FriOI	GRGCYC	2 cut(s)	132, 1156
Fsp4HI	GCNGC	4 cut(s)	83, 1101, 1418, 1421
FspBI	CTAG	6 cut(s)	258, 365, 656, 1277, 1508, 1547
GlaI	GCGC	1 cut(s)	426
GluI	GCNGC	4 cut(s)	83, 1101, 1418, 1421
GsaI	CCCAGC	1 cut(s)	1107
HaeIII	GGCC	6 cut(s)	35, 123, 144, 181, 1159, 1830
HapII	CCGG	4 cut(s)	125, 715, 1156, 1976
HgaI	GACGC	3 cut(s)	173, 323, 1459
HhaI	GCGC	1 cut(s)	427
Hin1I	GRCGYC	1 cut(s)	1057
Hin1II	CATG	8 cut(s)	323, 557, 873, 958, 1072, 1099, 1199, 1559
Hin6I	GCGC	1 cut(s)	425
HinP1I	GCGC	1 cut(s)	425
HincII	GTYRAC	2 cut(s)	93, 1009
HindII	GTYRAC	2 cut(s)	93, 1009
HindIII	AAGCTT	2 cut(s)	624, 1820
HinfI	GANTC	7 cut(s)	53, 464, 769, 1398, 1610, 1744, 1984
HpaI	GTTAAC	1 cut(s)	93
HpaII	CCGG	4 cut(s)	125, 715, 1156, 1976
HphI	GGTGA	3 cut(s)	128, 683, 851
Hpy166II	GTNNAC	8 cut(s)	93, 863, 1009, 1066, 1220, 1436, 1594, 1796
Hpy188III	TCNNGA	9 cut(s)	155, 365, 1015, 1586, 1651, 1754, 1781, 1808, 1976
Hpy8I	GTNNAC	8 cut(s)	93, 863, 1009, 1066, 1220, 1436, 1594, 1796
Hpy99I	CGWCG	2 cut(s)	164, 167
HpyAV	CCTTC	3 cut(s)	55, 715, 1253
HpyCH4III	ACNGT	5 cut(s)	436, 707, 1246, 1702, 1711
HpyCH4IV	ACGT	4 cut(s)	987, 1057, 1498, 1792
HpyF10VI	GCNNNNNNNGC	2 cut(s)	10, 1106
HpyF3I	CTNAG	8 cut(s)	767, 804, 1164, 1400, 1515, 1725, 1823, 1956
HpySE526I	ACGT	4 cut(s)	987, 1057, 1498, 1792
Hsp92I	GRCGYC	1 cut(s)	1057
Hsp92II	CATG	8 cut(s)	323, 557, 873, 958, 1072, 1099, 1199, 1559
HspAI	GCGC	1 cut(s)	425
Kpn2I	TCCGGA	1 cut(s)	1975
KpnI	GGTACC	1 cut(s)	1631
Ksp22I	TGATCA	1 cut(s)	1459
KspAI	GTTAAC	1 cut(s)	93
LguI	GCTCTTC	1 cut(s)	1295
LmnI	GCTCC	4 cut(s)	127, 751, 1151, 1978
Lsp1109I	GCAGC	4 cut(s)	94, 1112, 1404, 1432
LweI	GCATC	6 cut(s)	50, 195, 522, 1101, 1291, 1759
MabI	ACCWGGT	1 cut(s)	835
MaeI	CTAG	6 cut(s)	258, 365, 656, 1277, 1508, 1547
MaeII	ACGT	4 cut(s)	987, 1057, 1498, 1792
MaeIII	GTNAC	4 cut(s)	116, 263, 296, 1714
MbiI	CCGCTC	1 cut(s)	784
MfeI	CAATTG	2 cut(s)	381, 941
MflI	RGATCY	4 cut(s)	711, 913, 1540, 1582
MhlI	GDGCHC	2 cut(s)	132, 1156
MlyI	GAGTC	2 cut(s)	778, 1392
MmeI	TCCRAC	4 cut(s)	88, 511, 900, 1214
Mph1103I	ATGCAT	1 cut(s)	1051
MroI	TCCGGA	1 cut(s)	1975
MroXI	GAANNNNTTC	2 cut(s)	477, 950
MseI	TTAA	7 cut(s)	92, 522, 573, 891, 975, 992, 1472
MslI	CAYNNNNRTG	1 cut(s)	1560
MspA1I	CMGCKG	1 cut(s)	1103
MspCI	CTTAAG	1 cut(s)	974
MspI	CCGG	4 cut(s)	125, 715, 1156, 1976
MspR9I	CCNGG	8 cut(s)	97, 125, 748, 837, 1156, 1295, 1343, 1441
MunI	CAATTG	2 cut(s)	381, 941
Mva1269I	GAATGC	1 cut(s)	1792
MvaI	CCWGG	6 cut(s)	97, 748, 837, 1295, 1343, 1441
MvnI	CGCG	1 cut(s)	427
MwoI	GCNNNNNNNGC	2 cut(s)	10, 1106
NciI	CCSGG	2 cut(s)	125, 1156
NdeI	CATATG	1 cut(s)	1111
NlaIII	CATG	8 cut(s)	323, 557, 873, 958, 1072, 1099, 1199, 1559
NlaIV	GGNNCC	7 cut(s)	129, 753, 1034, 1153, 1365, 1584, 1629
NmeAIII	GCCGAG	1 cut(s)	17
NmuCI	GTSAC	2 cut(s)	116, 263
NsiI	ATGCAT	1 cut(s)	1051
NspV	TTCGAA	1 cut(s)	56
PciSI	GCTCTTC	1 cut(s)	1295
PctI	GAATGC	1 cut(s)	1792
PdmI	GAANNNNTTC	2 cut(s)	477, 950
PfeI	GAWTC	5 cut(s)	53, 464, 1610, 1744, 1984
PflFI	GACNNNGTC	1 cut(s)	22
PkrI	GCNGC	4 cut(s)	84, 1102, 1419, 1422
PleI	GAGTC	2 cut(s)	777, 1392
PmaCI	CACGTG	1 cut(s)	1499
PmlI	CACGTG	1 cut(s)	1499
PpsI	GAGTC	2 cut(s)	777, 1392
Ppu21I	YACGTR	1 cut(s)	1499
Psp6I	CCWGG	6 cut(s)	95, 746, 835, 1293, 1341, 1439
PspCI	CACGTG	1 cut(s)	1499
PspFI	CCCAGC	1 cut(s)	1103
PspGI	CCWGG	6 cut(s)	95, 746, 835, 1293, 1341, 1439
PspN4I	GGNNCC	7 cut(s)	129, 753, 1034, 1153, 1365, 1584, 1629
PspPI	GGNCC	5 cut(s)	122, 143, 180, 863, 1829
PstI	CTGCAG	1 cut(s)	1422
PsuI	RGATCY	4 cut(s)	711, 913, 1540, 1582
PsyI	GACNNNGTC	1 cut(s)	22
PvuII	CAGCTG	1 cut(s)	1103
RsaI	GTAC	9 cut(s)	229, 416, 654, 704, 789, 1512, 1629, 1704, 1847
RsaNI	GTAC	9 cut(s)	228, 415, 653, 703, 788, 1511, 1628, 1703, 1846
RseI	CAYNNNNRTG	1 cut(s)	1560
SapI	GCTCTTC	1 cut(s)	1295
SaqAI	TTAA	7 cut(s)	92, 522, 573, 891, 975, 992, 1472
SatI	GCNGC	4 cut(s)	83, 1101, 1418, 1421
Sau96I	GGNCC	5 cut(s)	122, 143, 180, 863, 1829
ScaI	AGTACT	1 cut(s)	654
SchI	GAGTC	2 cut(s)	778, 1392
ScrFI	CCNGG	8 cut(s)	97, 125, 748, 837, 1156, 1295, 1343, 1441
SduI	GDGCHC	2 cut(s)	132, 1156
SexAI	ACCWGGT	1 cut(s)	835
SfaNI	GCATC	6 cut(s)	50, 195, 522, 1101, 1291, 1759
SfcI	CTRYAG	1 cut(s)	1418
SfuI	TTCGAA	1 cut(s)	56
SinI	GGWCC	1 cut(s)	863
SmiMI	CAYNNNNRTG	1 cut(s)	1560
SmlI	CTYRAG	1 cut(s)	974
SmoI	CTYRAG	1 cut(s)	974
SsiI	CCGC	5 cut(s)	13, 149, 784, 1121, 1913
SspMI	CTAG	6 cut(s)	258, 365, 656, 1277, 1508, 1547
StyD4I	CCNGG	8 cut(s)	95, 123, 746, 835, 1154, 1293, 1341, 1439
StyI	CCWWGG	2 cut(s)	874, 1036
TaaI	ACNGT	5 cut(s)	436, 707, 1246, 1702, 1711
TaiI	ACGT	4 cut(s)	990, 1060, 1501, 1795
TaqI	TCGA	1 cut(s)	56
TatI	WGTACW	2 cut(s)	652, 702
TfiI	GAWTC	5 cut(s)	53, 464, 1610, 1744, 1984
Tru1I	TTAA	7 cut(s)	92, 522, 573, 891, 975, 992, 1472
Tru9I	TTAA	7 cut(s)	92, 522, 573, 891, 975, 992, 1472
TscAI	CASTG	3 cut(s)	382, 619, 1438
TseFI	GTSAC	2 cut(s)	116, 263
TseI	GCWGC	4 cut(s)	82, 1100, 1417, 1420
Tsp45I	GTSAC	2 cut(s)	116, 263
TspGWI	ACGGA	2 cut(s)	906, 1458
TspRI	CASTG	3 cut(s)	382, 619, 1438
Tth111I	GACNNNGTC	1 cut(s)	22
Vha464I	CTTAAG	1 cut(s)	974
VpaK11BI	GGWCC	1 cut(s)	863
XapI	RAATTY	4 cut(s)	244, 368, 1019, 1229
XbaI	TCTAGA	1 cut(s)	364
XcmI	CCANNNNNNNNNTGG	2 cut(s)	280, 881
XmiI	GTMKAC	3 cut(s)	1219, 1593, 1795
XmnI	GAANNNNTTC	2 cut(s)	477, 950
XspI	CTAG	6 cut(s)	258, 365, 656, 1277, 1508, 1547
ZraI	GACGTC	1 cut(s)	1058
ZrmI	AGTACT	1 cut(s)	654
Zsp2I	ATGCAT	1 cut(s)	1051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.