DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G69770 |
| fragaria_vesca | FvH4_1g00970 FvH4_2g39560 FvH4_2g39560 FvH4_2g39560 |
| malus_domestica | MD03G1011100.v1.1 MD03G1011200.v1.1 MD11G1012800.v1.1 MD11G1013000.v1.1 MD11G1013100.v1.1 MD11G1013200.v1.1 MD11G1013700.v1.1 |
| prunus_persica | Prupe.6G011600_v2.0.a1 Prupe.6G011600_v2.0.a1 |
| pyrus_communis | pycom03g00990 pycom11g00840 pycom11g00870 pycom11g00900 |
| rosa_chinensis | RchiOBHm_Chr2g0085701 RchiOBHm_Chr4g0398431 RchiOBHm_Chr4g0444071 |
| rosa_laevigata | RLG00000005861 RLG00000009362 RLG00000015713 |
| rosa_multiflora | Rmu_co8144248.1_g000001 Rmu_sc0009759.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00155110 Rroxscaffold_5G00343400 Rroxscaffold_5G00384620 |
| rosa_rugosa | Rorug01G0462700 Rorug04G0007900 Rorug04G0349300 Rorug04G0349400 |
| rosa_samantha | Rh2AG011600 Rh2BG012200 Rh2CG013000 Rh2DG014000 Rh4AG086100 Rh4AG410100 Rh4BG083000 Rh4BG421200 Rh4CG093900 Rh4CG435600 Rh4DG077800 Rh4DG416500 |
| rosa_wichuraiana | Rw2G001030 Rw4G007200 Rw4G035230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1559 |
| Acc16I | TGCGCA | 1 cut(s) | 1567 |
| Acc36I | ACCTGC | 1 cut(s) | 1559 |
| Acc65I | GGTACC | 1 cut(s) | 2095 |
| AccB1I | GGYRCC | 1 cut(s) | 2095 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1301 |
| AccBSI | CCGCTC | 1 cut(s) | 57 |
| AccI | GTMKAC | 5 cut(s) | 238, 794, 1126, 1275, 1582 |
| AccII | CGCG | 1 cut(s) | 447 |
| AciI | CCGC | 7 cut(s) | 57, 698, 926, 1600, 1930, 2192, 2198 |
| AclWI | GGATC | 4 cut(s) | 864, 1482, 2045, 2058 |
| AcsI | RAATTY | 3 cut(s) | 1259, 1484, 1853 |
| AcuI | CTGAAG | 1 cut(s) | 1116 |
| AcvI | CACGTG | 1 cut(s) | 2354 |
| AfaI | GTAC | 3 cut(s) | 32, 762, 2097 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1301, 1340, 1600, 1790 |
| AflIII | ACRYGT | 2 cut(s) | 295, 1963 |
| AjnI | CCWGG | 2 cut(s) | 1300, 2011 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 477, 509, 1104, 1136, 1391, 1423 |
| AleI | CACNNNNGTG | 1 cut(s) | 731 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 46, 78, 954, 986 |
| AluBI | AGCT | 8 cut(s) | 564, 687, 1199, 1753, 1831, 2290, 2339, 2419 |
| AluI | AGCT | 8 cut(s) | 564, 687, 1199, 1753, 1831, 2290, 2339, 2419 |
| Alw21I | GWGCWC | 1 cut(s) | 2359 |
| Alw44I | GTGCAC | 1 cut(s) | 2355 |
| AlwI | GGATC | 4 cut(s) | 864, 1482, 2045, 2058 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1094 |
| Ama87I | CYCGRG | 1 cut(s) | 2187 |
| AoxI | GGCC | 4 cut(s) | 158, 799, 1617, 1726 |
| ApaI | GGGCCC | 1 cut(s) | 1621 |
| ApaLI | GTGCAC | 1 cut(s) | 2355 |
| ApeKI | GCWGC | 3 cut(s) | 173, 564, 2419 |
| ApoI | RAATTY | 3 cut(s) | 1259, 1484, 1853 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 222, 489 |
| Asp718I | GGTACC | 1 cut(s) | 2095 |
| AspLEI | GCGC | 3 cut(s) | 16, 447, 1568 |
| AspS9I | GGNCC | 5 cut(s) | 159, 1328, 1617, 1618, 2297 |
| AsuC2I | CCSGG | 2 cut(s) | 2188, 2189 |
| AsuHPI | GGTGA | 5 cut(s) | 109, 134, 1316, 1919, 2411 |
| AvaI | CYCGRG | 1 cut(s) | 2187 |
| AvaII | GGWCC | 2 cut(s) | 1328, 2297 |
| AxyI | CCTNAGG | 2 cut(s) | 1785, 1980 |
| BaeGI | GKGCMC | 2 cut(s) | 1621, 2359 |
| BamHI | GGATCC | 1 cut(s) | 2050 |
| BanI | GGYRCC | 1 cut(s) | 2095 |
| BanII | GRGCYC | 2 cut(s) | 1221, 1621 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 744, 776 |
| BbrPI | CACGTG | 1 cut(s) | 2354 |
| BbsI | GAAGAC | 3 cut(s) | 482, 1408, 2463 |
| Bbv12I | GWGCWC | 1 cut(s) | 2359 |
| BbvI | GCAGC | 3 cut(s) | 160, 551, 2406 |
| BccI | CCATC | 8 cut(s) | 150, 257, 356, 840, 989, 1453, 1487, 1546 |
| BciT130I | CCWGG | 2 cut(s) | 1302, 2013 |
| BclI | TGATCA | 2 cut(s) | 1924, 1954 |
| BcnI | CCSGG | 2 cut(s) | 2188, 2189 |
| BfaI | CTAG | 2 cut(s) | 843, 1223 |
| BfmI | CTRYAG | 2 cut(s) | 394, 2334 |
| BfuAI | ACCTGC | 1 cut(s) | 1559 |
| BglII | AGATCT | 1 cut(s) | 1777 |
| BisI | GCNGC | 4 cut(s) | 174, 565, 2198, 2420 |
| BlpI | GCTNAGC | 1 cut(s) | 1865 |
| BlsI | GCNGC | 4 cut(s) | 175, 566, 2199, 2421 |
| Bme1390I | CCNGG | 4 cut(s) | 1302, 2013, 2188, 2189 |
| Bme18I | GGWCC | 2 cut(s) | 1328, 2297 |
| BmeT110I | CYCGRG | 1 cut(s) | 2187 |
| BmgT120I | GGNCC | 5 cut(s) | 159, 1328, 1617, 1618, 2297 |
| BmiI | GGNNCC | 7 cut(s) | 161, 1218, 1618, 1619, 2052, 2097, 2196 |
| BmrFI | CCNGG | 4 cut(s) | 1302, 2013, 2188, 2189 |
| BmrI | ACTGGG | 1 cut(s) | 2369 |
| BmsI | GCATC | 6 cut(s) | 280, 1024, 1075, 1756, 1905, 2227 |
| BmuI | ACTGGG | 1 cut(s) | 2369 |
| BpiI | GAAGAC | 3 cut(s) | 482, 1408, 2463 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1624, 1656 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1865 |
| BpuEI | CTTGAG | 1 cut(s) | 248 |
| BpuMI | CCSGG | 2 cut(s) | 2188, 2189 |
| BsaAI | YACGTR | 1 cut(s) | 2354 |
| BsaJI | CCNNGG | 5 cut(s) | 808, 1339, 1729, 2012, 2187 |
| BsaWI | WCCGGW | 1 cut(s) | 136 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 46, 76, 2454 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1301, 1340, 1600, 1790 |
| Bse118I | RCCGGY | 2 cut(s) | 127, 305 |
| Bse1I | ACTGG | 5 cut(s) | 507, 669, 802, 1279, 2364 |
| Bse21I | CCTNAGG | 2 cut(s) | 1785, 1980 |
| Bse3DI | GCAATG | 2 cut(s) | 941, 2115 |
| BseBI | CCWGG | 2 cut(s) | 1302, 2013 |
| BseDI | CCNNGG | 5 cut(s) | 808, 1339, 1729, 2012, 2187 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1301, 1340, 1600, 1790 |
| BseMI | GCAATG | 2 cut(s) | 941, 2115 |
| BseNI | ACTGG | 5 cut(s) | 507, 669, 802, 1279, 2364 |
| BseRI | GAGGAG | 3 cut(s) | 155, 1064, 1259 |
| BseSI | GKGCMC | 2 cut(s) | 1621, 2359 |
| BseXI | GCAGC | 3 cut(s) | 160, 551, 2406 |
| BsgI | GTGCAG | 1 cut(s) | 550 |
| Bsh1236I | CGCG | 1 cut(s) | 447 |
| BshFI | GGCC | 4 cut(s) | 160, 801, 1619, 1728 |
| BshNI | GGYRCC | 1 cut(s) | 2095 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2359 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2187 |
| BsiSI | CCGG | 5 cut(s) | 128, 137, 151, 306, 2188 |
| BslFI | GGGAC | 3 cut(s) | 975, 1900, 1961 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1301, 1340, 1600, 1790 |
| BsmFI | GGGAC | 3 cut(s) | 975, 1900, 1961 |
| BsmI | GAATGC | 1 cut(s) | 1951 |
| BsnI | GGCC | 4 cut(s) | 160, 801, 1619, 1728 |
| BsoBI | CYCGRG | 1 cut(s) | 2187 |
| Bsp120I | GGGCCC | 1 cut(s) | 1617 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1221, 1621, 2359 |
| Bsp143I | GATC | 8 cut(s) | 277, 856, 1474, 1777, 1924, 1954, 2050, 2230 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1865 |
| Bsp19I | CCATGG | 1 cut(s) | 1729 |
| BspACI | CCGC | 7 cut(s) | 57, 698, 926, 1600, 1930, 2192, 2198 |
| BspANI | GGCC | 4 cut(s) | 160, 801, 1619, 1728 |
| BspFNI | CGCG | 1 cut(s) | 447 |
| BspHI | TCATGA | 1 cut(s) | 1957 |
| BspLI | GGNNCC | 7 cut(s) | 161, 1218, 1618, 1619, 2052, 2097, 2196 |
| BspMI | ACCTGC | 1 cut(s) | 1559 |
| BspPI | GGATC | 4 cut(s) | 864, 1482, 2045, 2058 |
| BspT107I | GGYRCC | 1 cut(s) | 2095 |
| BsrBI | CCGCTC | 1 cut(s) | 57 |
| BsrDI | GCAATG | 2 cut(s) | 941, 2115 |
| BsrFI | RCCGGY | 2 cut(s) | 127, 305 |
| BsrI | ACTGG | 5 cut(s) | 507, 669, 802, 1279, 2364 |
| BssAI | RCCGGY | 2 cut(s) | 127, 305 |
| BssECI | CCNNGG | 5 cut(s) | 808, 1339, 1729, 2012, 2187 |
| BssMI | GATC | 8 cut(s) | 277, 856, 1474, 1777, 1924, 1954, 2050, 2230 |
| BssNAI | GTATAC | 2 cut(s) | 1127, 1276 |
| BssT1I | CCWWGG | 3 cut(s) | 808, 1339, 1729 |
| Bst1107I | GTATAC | 2 cut(s) | 1127, 1276 |
| Bst2UI | CCWGG | 2 cut(s) | 1302, 2013 |
| Bst6I | CTCTTC | 2 cut(s) | 1041, 1149 |
| BstBAI | YACGTR | 1 cut(s) | 2354 |
| BstC8I | GCNNGC | 3 cut(s) | 148, 307, 639 |
| BstDSI | CCRYGG | 1 cut(s) | 1729 |
| BstFNI | CGCG | 1 cut(s) | 447 |
| BstHHI | GCGC | 3 cut(s) | 16, 447, 1568 |
| BstKTI | GATC | 8 cut(s) | 280, 859, 1477, 1780, 1927, 1957, 2053, 2233 |
| BstMBI | GATC | 8 cut(s) | 277, 856, 1474, 1777, 1924, 1954, 2050, 2230 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 821 |
| BstNI | CCWGG | 2 cut(s) | 1302, 2013 |
| BstNSI | RCATGY | 2 cut(s) | 299, 872 |
| BstSCI | CCNGG | 4 cut(s) | 1300, 2011, 2186, 2187 |
| BstSFI | CTRYAG | 2 cut(s) | 394, 2334 |
| BstSLI | GKGCMC | 2 cut(s) | 1621, 2359 |
| BstUI | CGCG | 1 cut(s) | 447 |
| BstV1I | GCAGC | 3 cut(s) | 160, 551, 2406 |
| BstV2I | GAAGAC | 3 cut(s) | 482, 1408, 2463 |
| BstX2I | RGATCY | 4 cut(s) | 856, 1474, 1777, 2050 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 733, 2294 |
| BstYI | RGATCY | 4 cut(s) | 856, 1474, 1777, 2050 |
| BstZ17I | GTATAC | 2 cut(s) | 1127, 1276 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1785, 1980 |
| BsuRI | GGCC | 4 cut(s) | 160, 801, 1619, 1728 |
| BtgI | CCRYGG | 1 cut(s) | 1729 |
| BtsI | GCAGTG | 1 cut(s) | 1649 |
| BtsIMutI | CAGTG | 5 cut(s) | 392, 676, 1021, 1649, 2357 |
| BveI | ACCTGC | 1 cut(s) | 1559 |
| Cac8I | GCNNGC | 3 cut(s) | 148, 307, 639 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1094 |
| CciI | TCATGA | 1 cut(s) | 1957 |
| CfoI | GCGC | 3 cut(s) | 16, 447, 1568 |
| Cfr10I | RCCGGY | 2 cut(s) | 127, 305 |
| Cfr13I | GGNCC | 5 cut(s) | 159, 1328, 1617, 1618, 2297 |
| Cfr9I | CCCGGG | 1 cut(s) | 2187 |
| CsiI | ACCWGGT | 1 cut(s) | 1300 |
| Csp6I | GTAC | 3 cut(s) | 31, 761, 2096 |
| CviAII | CATG | 9 cut(s) | 296, 869, 896, 1271, 1335, 1420, 1661, 1730, 1958 |
| CviQI | GTAC | 3 cut(s) | 31, 761, 2096 |
| DpnI | GATC | 8 cut(s) | 279, 858, 1476, 1779, 1926, 1956, 2052, 2232 |
| DpnII | GATC | 8 cut(s) | 277, 856, 1474, 1777, 1924, 1954, 2050, 2230 |
| DraI | TTTAAA | 1 cut(s) | 979 |
| Eam1104I | CTCTTC | 2 cut(s) | 1041, 1149 |
| EarI | CTCTTC | 2 cut(s) | 1041, 1149 |
| EciI | GGCGGA | 1 cut(s) | 2207 |
| Eco130I | CCWWGG | 3 cut(s) | 808, 1339, 1729 |
| Eco24I | GRGCYC | 2 cut(s) | 1221, 1621 |
| Eco47I | GGWCC | 2 cut(s) | 1328, 2297 |
| Eco57I | CTGAAG | 1 cut(s) | 1116 |
| Eco72I | CACGTG | 1 cut(s) | 2354 |
| Eco81I | CCTNAGG | 2 cut(s) | 1785, 1980 |
| Eco88I | CYCGRG | 1 cut(s) | 2187 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1617, 1618 |
| EcoRII | CCWGG | 2 cut(s) | 1300, 2011 |
| EcoT14I | CCWWGG | 3 cut(s) | 808, 1339, 1729 |
| EcoT22I | ATGCAT | 1 cut(s) | 2436 |
| EcoT38I | GRGCYC | 2 cut(s) | 1221, 1621 |
| ErhI | CCWWGG | 3 cut(s) | 808, 1339, 1729 |
| FaeI | CATG | 9 cut(s) | 299, 872, 899, 1274, 1338, 1423, 1664, 1733, 1961 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 210, 242 |
| FaqI | GGGAC | 3 cut(s) | 975, 1900, 1961 |
| FatI | CATG | 9 cut(s) | 295, 868, 895, 1270, 1334, 1419, 1660, 1729, 1957 |
| FauI | CCCGC | 1 cut(s) | 1593 |
| FauNDI | CATATG | 1 cut(s) | 1576 |
| FbaI | TGATCA | 2 cut(s) | 1924, 1954 |
| FblI | GTMKAC | 5 cut(s) | 238, 794, 1126, 1275, 1582 |
| Fnu4HI | GCNGC | 4 cut(s) | 174, 565, 2198, 2420 |
| FriOI | GRGCYC | 2 cut(s) | 1221, 1621 |
| Fsp4HI | GCNGC | 4 cut(s) | 174, 565, 2198, 2420 |
| FspBI | CTAG | 2 cut(s) | 843, 1223 |
| FspI | TGCGCA | 1 cut(s) | 1567 |
| GlaI | GCGC | 3 cut(s) | 15, 446, 1567 |
| GluI | GCNGC | 4 cut(s) | 174, 565, 2198, 2420 |
| HaeIII | GGCC | 4 cut(s) | 160, 801, 1619, 1728 |
| HapII | CCGG | 5 cut(s) | 128, 137, 151, 306, 2188 |
| HhaI | GCGC | 3 cut(s) | 16, 447, 1568 |
| Hin1II | CATG | 9 cut(s) | 299, 872, 899, 1274, 1338, 1423, 1664, 1733, 1961 |
| Hin6I | GCGC | 3 cut(s) | 14, 445, 1566 |
| HinP1I | GCGC | 3 cut(s) | 14, 445, 1566 |
| HincII | GTYRAC | 3 cut(s) | 239, 616, 703 |
| HindII | GTYRAC | 3 cut(s) | 239, 616, 703 |
| HindIII | AAGCTT | 1 cut(s) | 1751 |
| HinfI | GANTC | 8 cut(s) | 178, 437, 516, 920, 1091, 1684, 2005, 2405 |
| HpaI | GTTAAC | 1 cut(s) | 703 |
| HpaII | CCGG | 5 cut(s) | 128, 137, 151, 306, 2188 |
| HphI | GGTGA | 5 cut(s) | 109, 134, 1316, 1919, 2411 |
| Hpy166II | GTNNAC | 8 cut(s) | 239, 616, 703, 795, 1127, 1276, 1583, 2357 |
| Hpy188III | TCNNGA | 7 cut(s) | 227, 1366, 1784, 1958, 2054, 2249, 2276 |
| Hpy8I | GTNNAC | 8 cut(s) | 239, 616, 703, 795, 1127, 1276, 1583, 2357 |
| Hpy99I | CGWCG | 1 cut(s) | 240 |
| HpyAV | CCTTC | 7 cut(s) | 34, 187, 413, 952, 1153, 1631, 1718 |
| HpyCH4IV | ACGT | 5 cut(s) | 1129, 1812, 1963, 2149, 2353 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 821 |
| HpySE526I | ACGT | 5 cut(s) | 1129, 1812, 1963, 2149, 2353 |
| Hsp92II | CATG | 9 cut(s) | 299, 872, 899, 1274, 1338, 1423, 1664, 1733, 1961 |
| HspAI | GCGC | 3 cut(s) | 14, 445, 1566 |
| KpnI | GGTACC | 1 cut(s) | 2099 |
| KroI | GCCGGC | 1 cut(s) | 305 |
| KroNI | GCCGGC | 1 cut(s) | 307 |
| Ksp22I | TGATCA | 2 cut(s) | 1924, 1954 |
| KspAI | GTTAAC | 1 cut(s) | 703 |
| Kzo9I | GATC | 8 cut(s) | 277, 856, 1474, 1777, 1924, 1954, 2050, 2230 |
| LmnI | GCTCC | 6 cut(s) | 54, 736, 1196, 1216, 1699, 2194 |
| Lsp1109I | GCAGC | 3 cut(s) | 160, 551, 2406 |
| LweI | GCATC | 6 cut(s) | 280, 1024, 1075, 1756, 1905, 2227 |
| MabI | ACCWGGT | 1 cut(s) | 1300 |
| MaeI | CTAG | 2 cut(s) | 843, 1223 |
| MaeII | ACGT | 5 cut(s) | 1129, 1812, 1963, 2149, 2353 |
| MaeIII | GTNAC | 5 cut(s) | 463, 838, 1808, 2182, 2363 |
| MalI | GATC | 8 cut(s) | 279, 858, 1476, 1779, 1926, 1956, 2052, 2232 |
| MbiI | CCGCTC | 1 cut(s) | 57 |
| MboI | GATC | 8 cut(s) | 277, 856, 1474, 1777, 1924, 1954, 2050, 2230 |
| MfeI | CAATTG | 1 cut(s) | 1406 |
| MflI | RGATCY | 4 cut(s) | 856, 1474, 1777, 2050 |
| MhlI | GDGCHC | 3 cut(s) | 1221, 1621, 2359 |
| MlyI | GAGTC | 1 cut(s) | 172 |
| MmeI | TCCRAC | 5 cut(s) | 231, 462, 1510, 1740, 1771 |
| Mph1103I | ATGCAT | 1 cut(s) | 2436 |
| MroNI | GCCGGC | 1 cut(s) | 305 |
| MroXI | GAANNNNTTC | 2 cut(s) | 222, 489 |
| MseI | TTAA | 6 cut(s) | 702, 830, 978, 987, 1173, 2075 |
| MslI | CAYNNNNRTG | 4 cut(s) | 168, 731, 1908, 1962 |
| MspI | CCGG | 5 cut(s) | 128, 137, 151, 306, 2188 |
| MspR9I | CCNGG | 4 cut(s) | 1302, 2013, 2188, 2189 |
| MunI | CAATTG | 1 cut(s) | 1406 |
| Mva1269I | GAATGC | 1 cut(s) | 1951 |
| MvaI | CCWGG | 2 cut(s) | 1302, 2013 |
| MvnI | CGCG | 1 cut(s) | 447 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 821 |
| NaeI | GCCGGC | 1 cut(s) | 307 |
| NciI | CCSGG | 2 cut(s) | 2188, 2189 |
| NcoI | CCATGG | 1 cut(s) | 1729 |
| NdeI | CATATG | 1 cut(s) | 1576 |
| NdeII | GATC | 8 cut(s) | 277, 856, 1474, 1777, 1924, 1954, 2050, 2230 |
| NgoMIV | GCCGGC | 1 cut(s) | 305 |
| NlaIII | CATG | 9 cut(s) | 299, 872, 899, 1274, 1338, 1423, 1664, 1733, 1961 |
| NlaIV | GGNNCC | 7 cut(s) | 161, 1218, 1618, 1619, 2052, 2097, 2196 |
| NmeAIII | GCCGAG | 1 cut(s) | 800 |
| NmuCI | GTSAC | 1 cut(s) | 1808 |
| NsbI | TGCGCA | 1 cut(s) | 1567 |
| NsiI | ATGCAT | 1 cut(s) | 2436 |
| NspI | RCATGY | 2 cut(s) | 299, 872 |
| OliI | CACNNNNGTG | 1 cut(s) | 731 |
| PagI | TCATGA | 1 cut(s) | 1957 |
| PaqCI | CACCTGC | 1 cut(s) | 1559 |
| PciI | ACATGT | 1 cut(s) | 295 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1969 |
| PctI | GAATGC | 1 cut(s) | 1951 |
| PdiI | GCCGGC | 1 cut(s) | 307 |
| PdmI | GAANNNNTTC | 2 cut(s) | 222, 489 |
| PfeI | GAWTC | 7 cut(s) | 437, 516, 920, 1091, 1684, 2005, 2405 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1301 |
| PkrI | GCNGC | 4 cut(s) | 175, 566, 2199, 2421 |
| PleI | GAGTC | 1 cut(s) | 172 |
| PmaCI | CACGTG | 1 cut(s) | 2354 |
| PmlI | CACGTG | 1 cut(s) | 2354 |
| PpsI | GAGTC | 1 cut(s) | 172 |
| Ppu21I | YACGTR | 1 cut(s) | 2354 |
| PscI | ACATGT | 1 cut(s) | 295 |
| Psp6I | CCWGG | 2 cut(s) | 1300, 2011 |
| PspCI | CACGTG | 1 cut(s) | 2354 |
| PspGI | CCWGG | 2 cut(s) | 1300, 2011 |
| PspN4I | GGNNCC | 7 cut(s) | 161, 1218, 1618, 1619, 2052, 2097, 2196 |
| PspOMI | GGGCCC | 1 cut(s) | 1617 |
| PspPI | GGNCC | 5 cut(s) | 159, 1328, 1617, 1618, 2297 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2229, 2261 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1094 |
| PsuI | RGATCY | 4 cut(s) | 856, 1474, 1777, 2050 |
| RsaI | GTAC | 3 cut(s) | 32, 762, 2097 |
| RsaNI | GTAC | 3 cut(s) | 31, 761, 2096 |
| RseI | CAYNNNNRTG | 4 cut(s) | 168, 731, 1908, 1962 |
| SalI | GTCGAC | 1 cut(s) | 237 |
| SaqAI | TTAA | 6 cut(s) | 702, 830, 978, 987, 1173, 2075 |
| SatI | GCNGC | 4 cut(s) | 174, 565, 2198, 2420 |
| Sau3AI | GATC | 8 cut(s) | 277, 856, 1474, 1777, 1924, 1954, 2050, 2230 |
| Sau96I | GGNCC | 5 cut(s) | 159, 1328, 1617, 1618, 2297 |
| SchI | GAGTC | 1 cut(s) | 172 |
| ScrFI | CCNGG | 4 cut(s) | 1302, 2013, 2188, 2189 |
| SduI | GDGCHC | 3 cut(s) | 1221, 1621, 2359 |
| SexAI | ACCWGGT | 1 cut(s) | 1300 |
| SfaNI | GCATC | 6 cut(s) | 280, 1024, 1075, 1756, 1905, 2227 |
| SfcI | CTRYAG | 2 cut(s) | 394, 2334 |
| SinI | GGWCC | 2 cut(s) | 1328, 2297 |
| SmaI | CCCGGG | 1 cut(s) | 2189 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 168, 731, 1908, 1962 |
| SmlI | CTYRAG | 1 cut(s) | 227 |
| SmoI | CTYRAG | 1 cut(s) | 227 |
| SsiI | CCGC | 7 cut(s) | 57, 698, 926, 1600, 1930, 2192, 2198 |
| SspMI | CTAG | 2 cut(s) | 843, 1223 |
| StyD4I | CCNGG | 4 cut(s) | 1300, 2011, 2186, 2187 |
| StyI | CCWWGG | 3 cut(s) | 808, 1339, 1729 |
| TaiI | ACGT | 5 cut(s) | 1132, 1815, 1966, 2152, 2356 |
| TaqI | TCGA | 2 cut(s) | 23, 238 |
| TatI | WGTACW | 2 cut(s) | 30, 760 |
| TauI | GCSGC | 1 cut(s) | 2200 |
| TfiI | GAWTC | 7 cut(s) | 437, 516, 920, 1091, 1684, 2005, 2405 |
| Tru1I | TTAA | 6 cut(s) | 702, 830, 978, 987, 1173, 2075 |
| Tru9I | TTAA | 6 cut(s) | 702, 830, 978, 987, 1173, 2075 |
| TscAI | CASTG | 5 cut(s) | 392, 676, 1021, 1656, 2364 |
| TseFI | GTSAC | 1 cut(s) | 1808 |
| TseI | GCWGC | 3 cut(s) | 173, 564, 2419 |
| Tsp45I | GTSAC | 1 cut(s) | 1808 |
| TspGWI | ACGGA | 3 cut(s) | 1583, 2460, 2475 |
| TspMI | CCCGGG | 1 cut(s) | 2187 |
| TspRI | CASTG | 5 cut(s) | 392, 676, 1021, 1656, 2364 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1301 |
| VneI | GTGCAC | 1 cut(s) | 2355 |
| VpaK11BI | GGWCC | 2 cut(s) | 1328, 2297 |
| XapI | RAATTY | 3 cut(s) | 1259, 1484, 1853 |
| XceI | RCATGY | 2 cut(s) | 299, 872 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1346 |
| XmaI | CCCGGG | 1 cut(s) | 2187 |
| XmiI | GTMKAC | 5 cut(s) | 238, 794, 1126, 1275, 1582 |
| XmnI | GAANNNNTTC | 2 cut(s) | 222, 489 |
| XspI | CTAG | 2 cut(s) | 843, 1223 |
| Zsp2I | ATGCAT | 1 cut(s) | 2436 |