MD11G1235100.v1.1

Diacylglycerol kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
34217177 .. 34222469
5293 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1235100.v1.1.491

Sequence Viewer

Length: 1386 bp
ATGCCAAAAGTTCGAATTGTGCCTTCGTGTCCGGTCATTGTGTTTGTTAATGCCAAAAGTGGTGGTCAGCTTGGAGGTGAACTTCTTCTTACGTATCGTTCCCTTCTCAATGAAAACCAGGTTATTGACTTGGGAGAAAAGGCTCCTGACAAGGTGCTACACAAGCTTTATGTAACTTTAGAAACTCTCAAGAGCGGTGGAGATGTTTTGGCTGCTGAAATCGAGAAGAGGTTAAGAATAATCGTTGCAGGTGGAGATGGTACAGCAGGCTGGCTCCTCAGTGTAGTTTCTGATCTTAAACTACCTAGCCCACCTCCGATTGCCCCAGTCCCGTTAGGAACTGGAAACAACCTCCACTTCGCATTCGGTTGGGGGAAGAAAAATCCTGGCACAGACCGTCAGTCTGTGCAGTATTTCTTGAATCAAGTGAAGATTGCGAAGGAAATGCAAATTGACAGCTGGCACATAATAATGAGAATGAAGTCTCCAACGGATGATTCTTGTGACCCTATTGCGCCTCTTGAACTACCCCATTCTTTACATGCATTTCATCGGGTCTCCCAAAATGATACACTCAATATGGAGGGTTACCAGACTTTTCGCGGGGGCTTTTGGAACTATTTTAGCATGGGAATGGATGCTCAAATATCATATGATTTTCACGCACAGAGGAAGTTGCATGCTGAAAAGTTTAGAAACCAGTTAGTTAATCAAGGTACTTACTTGAAGCTTGGATGTACACAAGGATGGTTTTGTGCTTCTCTTTCGCATCCAGCTTCACGGAACGTAGCACAGCAGATAAAGCTTAGGATCATGAAAAGACAAGGTCAATGGGAGGATGTCCTCATACCTCGCAGCATCAGGTCTATTGTTTGCCTCAACTTACCCAGTTTTTCTGGTGGTCTTGATCCATGGGGGAAACCAAATAGGAAGAAAATGCAATATCGGGATTTAACTCCTCCATATGTGGATGATGGCCTCATTGAAATTGTTGGTTTTAGAGATGCCTGGCATGGTCTTGTGTTACTTACTTCTAAGGGACACGGGACTCGTATTGCACAAGCAAACAGAGTACGTTTCGAGTTTTGCAAGGGTGCAGCTGACCATACATTCATGAGAATTGATGGGGAGCCATGGAAACAGCCTCTTCCAGCTGATGATGACACAGTGGTTGTAGAAATTTCTCACTTTGGCCAAGTGAGCATGCTTGCCACACCACTAAATCGTTCCCAAAGCATACATGAACCACTGTCACCAGCGGGCTCCCACGATGAGGATGATGATAGTATTGACGAAGAATATGCAGATGCAGAAGAAATGGAAGAGAGGAGGAAGTTTGGTGCATCTGAGACGTTTAAATTTCCTGACGGGGCTGACATAGCTTGA

Protein Analysis

462

Amino Acids

51.52

Weight (kDa)

6.32

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAGK_cat PF00781 11 - 131 1.1e-18 Diacylglycerol kinase catalytic domain
DAGK_acc PF00609 204 - 378 1.5e-36 Diacylglycerol kinase accessory domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 239
Acc36I ACCTGC 1 cut(s) 239
AccBSI CCGCTC 1 cut(s) 195
AccII CGCG 1 cut(s) 603
AciI CCGC 3 cut(s) 195, 603, 1259
AclWI GGATC 2 cut(s) 818, 902
AcoI YGGCCR 1 cut(s) 1192
AcsI RAATTY 2 cut(s) 1179, 1358
AfaI GTAC 4 cut(s) 262, 718, 739, 1074
AfiI CCNNNNNNNGG 1 cut(s) 1273
AgsI TTSAA 4 cut(s) 421, 524, 727, 986
AhdI GACNNNNNGTC 1 cut(s) 400
AjnI CCWGG 3 cut(s) 117, 385, 1007
AjuI GAANNNNNNNTTGG 2 cut(s) 481, 513
AluBI AGCT 9 cut(s) 70, 166, 459, 730, 776, 805, 1100, 1154, 1382
AluI AGCT 9 cut(s) 70, 166, 459, 730, 776, 805, 1100, 1154, 1382
Alw26I GTCTC 3 cut(s) 489, 562, 1343
AlwI GGATC 2 cut(s) 818, 902
AoxI GGCC 2 cut(s) 976, 1192
ApeKI GCWGC 3 cut(s) 212, 855, 1097
ApoI RAATTY 2 cut(s) 1179, 1358
Asp700I GAANNNNTTC 1 cut(s) 84
AspLEI GCGC 1 cut(s) 517
AsuHPI GGTGA 2 cut(s) 89, 1245
AsuII TTCGAA 1 cut(s) 13
BalI TGGCCA 1 cut(s) 1194
BanII GRGCYC 1 cut(s) 1265
BbvI GCAGC 3 cut(s) 199, 867, 1109
BccI CCATC 4 cut(s) 251, 741, 968, 1118
BcgI CGANNNNNNTGC 4 cut(s) 427, 461, 1283, 1317
BciT130I CCWGG 3 cut(s) 119, 387, 1009
BcoDI GTCTC 3 cut(s) 489, 562, 1343
BfaI CTAG 1 cut(s) 306
BfuAI ACCTGC 1 cut(s) 239
BisI GCNGC 3 cut(s) 213, 856, 1098
BlsI GCNGC 3 cut(s) 214, 857, 1099
Bme1390I CCNGG 3 cut(s) 119, 387, 1009
BmeRI GACNNNNNGTC 1 cut(s) 400
BmiI GGNNCC 4 cut(s) 144, 275, 1131, 1264
BmrFI CCNGG 3 cut(s) 119, 387, 1009
BmrI ACTGGG 2 cut(s) 320, 882
BmsI GCATC 6 cut(s) 628, 778, 867, 994, 1297, 1352
BmuI ACTGGG 2 cut(s) 320, 882
Bpu10I CCTNAGC 1 cut(s) 806
Bpu14I TTCGAA 1 cut(s) 13
BpuEI CTTGAG 1 cut(s) 173
BsaAI YACGTR 1 cut(s) 93
BsaI GGTCTC 1 cut(s) 562
BsaJI CCNNGG 2 cut(s) 911, 1133
BsaWI WCCGGW 1 cut(s) 31
Bsc4I CCNNNNNNNGG 1 cut(s) 1273
Bse1I ACTGG 4 cut(s) 326, 346, 700, 888
BseBI CCWGG 3 cut(s) 119, 387, 1009
BseDI CCNNGG 2 cut(s) 911, 1133
BseGI GGATG 8 cut(s) 499, 643, 740, 752, 769, 844, 976, 1282
BseLI CCNNNNNNNGG 1 cut(s) 1273
BseMII CTCAG 2 cut(s) 292, 1338
BseNI ACTGG 4 cut(s) 326, 346, 700, 888
BseRI GAGGAG 3 cut(s) 266, 948, 1342
BseXI GCAGC 3 cut(s) 199, 867, 1109
BsgI GTGCAG 2 cut(s) 428, 1116
Bsh1236I CGCG 1 cut(s) 603
BshFI GGCC 2 cut(s) 978, 1194
BsiSI CCGG 1 cut(s) 32
BslFI GGGAC 3 cut(s) 314, 1053, 1060
BslI CCNNNNNNNGG 1 cut(s) 1273
BsmAI GTCTC 3 cut(s) 489, 562, 1343
BsmBI CGTCTC 1 cut(s) 1343
BsmFI GGGAC 3 cut(s) 314, 1053, 1060
BsmI GAATGC 1 cut(s) 362
BsnI GGCC 2 cut(s) 978, 1194
Bso31I GGTCTC 1 cut(s) 562
Bsp119I TTCGAA 1 cut(s) 13
Bsp1286I GDGCHC 1 cut(s) 1265
Bsp1407I TGTACA 1 cut(s) 737
Bsp143I GATC 3 cut(s) 292, 810, 907
Bsp19I CCATGG 2 cut(s) 911, 1133
BspACI CCGC 3 cut(s) 195, 603, 1259
BspANI GGCC 2 cut(s) 978, 1194
BspCNI CTCAG 2 cut(s) 291, 1339
BspFNI CGCG 1 cut(s) 603
BspHI TCATGA 2 cut(s) 813, 1113
BspLI GGNNCC 4 cut(s) 144, 275, 1131, 1264
BspMI ACCTGC 1 cut(s) 239
BspPI GGATC 2 cut(s) 818, 902
BspT104I TTCGAA 1 cut(s) 13
BspTNI GGTCTC 1 cut(s) 562
BsrBI CCGCTC 1 cut(s) 195
BsrGI TGTACA 1 cut(s) 737
BsrI ACTGG 4 cut(s) 326, 346, 700, 888
BssECI CCNNGG 2 cut(s) 911, 1133
BssMI GATC 3 cut(s) 292, 810, 907
BssT1I CCWWGG 2 cut(s) 911, 1133
Bst2UI CCWGG 3 cut(s) 119, 387, 1009
Bst4CI ACNGT 3 cut(s) 398, 1168, 1251
Bst6I CTCTTC 3 cut(s) 221, 1152, 1317
BstAUI TGTACA 1 cut(s) 737
BstBAI YACGTR 1 cut(s) 93
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 7 cut(s) 268, 272, 461, 681, 1205, 1209, 1261
BstDEI CTNAG 4 cut(s) 278, 806, 1035, 1347
BstDSI CCRYGG 2 cut(s) 911, 1133
BstEII GGTNACC 1 cut(s) 587
BstF5I GGATG 8 cut(s) 499, 643, 740, 752, 769, 844, 976, 1282
BstFNI CGCG 1 cut(s) 603
BstHHI GCGC 1 cut(s) 517
BstKTI GATC 3 cut(s) 295, 813, 910
BstMAI GTCTC 3 cut(s) 489, 562, 1343
BstMBI GATC 3 cut(s) 292, 810, 907
BstMWI GCNNNNNNNGC 4 cut(s) 163, 802, 1200, 1379
BstNI CCWGG 3 cut(s) 119, 387, 1009
BstNSI RCATGY 3 cut(s) 545, 683, 1207
BstPI GGTNACC 1 cut(s) 587
BstSCI CCNGG 3 cut(s) 117, 385, 1007
BstSNI TACGTA 1 cut(s) 93
BstUI CGCG 1 cut(s) 603
BstV1I GCAGC 3 cut(s) 199, 867, 1109
BsuRI GGCC 2 cut(s) 978, 1194
BtgI CCRYGG 2 cut(s) 911, 1133
BtsCI GGATG 8 cut(s) 499, 643, 740, 752, 769, 844, 976, 1282
BtsIMutI CAGTG 3 cut(s) 286, 1173, 1247
BveI ACCTGC 1 cut(s) 239
Cac8I GCNNGC 7 cut(s) 268, 272, 461, 681, 1205, 1209, 1261
CciI TCATGA 2 cut(s) 813, 1113
CfoI GCGC 1 cut(s) 517
CsiI ACCWGGT 1 cut(s) 117
Csp6I GTAC 4 cut(s) 261, 717, 738, 1073
CspCI CAANNNNNGTGG 4 cut(s) 43, 78, 178, 213
CviQI GTAC 4 cut(s) 261, 717, 738, 1073
DdeI CTNAG 4 cut(s) 278, 806, 1035, 1347
DpnI GATC 3 cut(s) 294, 812, 909
DpnII GATC 3 cut(s) 292, 810, 907
DraI TTTAAA 1 cut(s) 1357
DriI GACNNNNNGTC 1 cut(s) 400
EaeI YGGCCR 1 cut(s) 1192
Eam1104I CTCTTC 3 cut(s) 221, 1152, 1317
Eam1105I GACNNNNNGTC 1 cut(s) 400
EarI CTCTTC 3 cut(s) 221, 1152, 1317
Eco105I TACGTA 1 cut(s) 93
Eco130I CCWWGG 2 cut(s) 911, 1133
Eco24I GRGCYC 1 cut(s) 1265
Eco31I GGTCTC 1 cut(s) 562
Eco91I GGTNACC 1 cut(s) 587
EcoO65I GGTNACC 1 cut(s) 587
EcoRII CCWGG 3 cut(s) 117, 385, 1007
EcoT14I CCWWGG 2 cut(s) 911, 1133
EcoT22I ATGCAT 1 cut(s) 547
EcoT38I GRGCYC 1 cut(s) 1265
ErhI CCWWGG 2 cut(s) 911, 1133
Esp3I CGTCTC 1 cut(s) 1343
FaqI GGGAC 3 cut(s) 314, 1053, 1060
FauI CCCGC 2 cut(s) 596, 1252
FauNDI CATATG 2 cut(s) 652, 964
Fnu4HI GCNGC 3 cut(s) 213, 856, 1098
FokI GGATG 8 cut(s) 506, 650, 747, 756, 759, 851, 983, 1289
FriOI GRGCYC 1 cut(s) 1265
Fsp4HI GCNGC 3 cut(s) 213, 856, 1098
FspBI CTAG 1 cut(s) 306
GlaI GCGC 1 cut(s) 516
GluI GCNGC 3 cut(s) 213, 856, 1098
HaeIII GGCC 2 cut(s) 978, 1194
HapII CCGG 1 cut(s) 32
HhaI GCGC 1 cut(s) 517
Hin6I GCGC 1 cut(s) 515
HinP1I GCGC 1 cut(s) 515
HindIII AAGCTT 3 cut(s) 164, 728, 803
HinfI GANTC 3 cut(s) 421, 497, 1048
HpaII CCGG 1 cut(s) 32
HphI GGTGA 2 cut(s) 89, 1245
Hpy166II GTNNAC 2 cut(s) 80, 740
Hpy188I TCNGA 3 cut(s) 292, 318, 1348
Hpy8I GTNNAC 2 cut(s) 80, 740
HpyAV CCTTC 3 cut(s) 33, 113, 433
HpyCH4III ACNGT 3 cut(s) 398, 1168, 1251
HpyCH4IV ACGT 4 cut(s) 92, 786, 1075, 1352
HpyF10VI GCNNNNNNNGC 4 cut(s) 163, 802, 1200, 1379
HpyF3I CTNAG 4 cut(s) 278, 806, 1035, 1347
HpySE526I ACGT 4 cut(s) 92, 786, 1075, 1352
HspAI GCGC 1 cut(s) 515
Kzo9I GATC 3 cut(s) 292, 810, 907
LmnI GCTCC 4 cut(s) 148, 279, 1129, 1268
Lsp1109I GCAGC 3 cut(s) 199, 867, 1109
LweI GCATC 6 cut(s) 628, 778, 867, 994, 1297, 1352
MabI ACCWGGT 1 cut(s) 117
MaeI CTAG 1 cut(s) 306
MaeII ACGT 4 cut(s) 92, 786, 1075, 1352
MaeIII GTNAC 5 cut(s) 172, 503, 587, 1023, 1251
MalI GATC 3 cut(s) 294, 812, 909
MbiI CCGCTC 1 cut(s) 195
MboI GATC 3 cut(s) 292, 810, 907
MboII GAAGA 9 cut(s) 77, 238, 388, 442, 943, 1139, 1307, 1325, 1334
MhlI GDGCHC 1 cut(s) 1265
MlsI TGGCCA 1 cut(s) 1194
MluCI AATT 6 cut(s) 15, 450, 987, 1119, 1179, 1358
MluNI TGGCCA 1 cut(s) 1194
MlyI GAGTC 1 cut(s) 1042
MmeI TCCRAC 1 cut(s) 512
Mox20I TGGCCA 1 cut(s) 1194
Mph1103I ATGCAT 1 cut(s) 547
MroXI GAANNNNTTC 1 cut(s) 84
MscI TGGCCA 1 cut(s) 1194
MseI TTAA 6 cut(s) 48, 233, 297, 708, 953, 1356
MslI CAYNNNNRTG 3 cut(s) 470, 632, 745
Msp20I TGGCCA 1 cut(s) 1194
MspA1I CMGCKG 4 cut(s) 459, 1100, 1154, 1259
MspI CCGG 1 cut(s) 32
MspR9I CCNGG 3 cut(s) 119, 387, 1009
Mva1269I GAATGC 1 cut(s) 362
MvaI CCWGG 3 cut(s) 119, 387, 1009
MvnI CGCG 1 cut(s) 603
MwoI GCNNNNNNNGC 4 cut(s) 163, 802, 1200, 1379
NcoI CCATGG 2 cut(s) 911, 1133
NdeI CATATG 2 cut(s) 652, 964
NdeII GATC 3 cut(s) 292, 810, 907
NlaIV GGNNCC 4 cut(s) 144, 275, 1131, 1264
NmuCI GTSAC 2 cut(s) 503, 1251
NsiI ATGCAT 1 cut(s) 547
NspI RCATGY 3 cut(s) 545, 683, 1207
NspV TTCGAA 1 cut(s) 13
PaeI GCATGC 2 cut(s) 683, 1207
PagI TCATGA 2 cut(s) 813, 1113
PaqCI CACCTGC 1 cut(s) 239
PctI GAATGC 1 cut(s) 362
PdmI GAANNNNTTC 1 cut(s) 84
PfeI GAWTC 2 cut(s) 421, 497
PflFI GACNNNGTC 1 cut(s) 825
PkrI GCNGC 3 cut(s) 214, 857, 1099
PleI GAGTC 1 cut(s) 1042
PpsI GAGTC 1 cut(s) 1042
Ppu21I YACGTR 1 cut(s) 93
Psp6I CCWGG 3 cut(s) 117, 385, 1007
PspEI GGTNACC 1 cut(s) 587
PspGI CCWGG 3 cut(s) 117, 385, 1007
PspN4I GGNNCC 4 cut(s) 144, 275, 1131, 1264
PsyI GACNNNGTC 1 cut(s) 825
PvuII CAGCTG 3 cut(s) 459, 1100, 1154
RsaI GTAC 4 cut(s) 262, 718, 739, 1074
RsaNI GTAC 4 cut(s) 261, 717, 738, 1073
RseI CAYNNNNRTG 3 cut(s) 470, 632, 745
SaqAI TTAA 6 cut(s) 48, 233, 297, 708, 953, 1356
SatI GCNGC 3 cut(s) 213, 856, 1098
Sau3AI GATC 3 cut(s) 292, 810, 907
SchI GAGTC 1 cut(s) 1042
ScrFI CCNGG 3 cut(s) 119, 387, 1009
SduI GDGCHC 1 cut(s) 1265
SexAI ACCWGGT 1 cut(s) 117
SfaNI GCATC 6 cut(s) 628, 778, 867, 994, 1297, 1352
SfuI TTCGAA 1 cut(s) 13
SmiMI CAYNNNNRTG 3 cut(s) 470, 632, 745
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
SnaBI TACGTA 1 cut(s) 93
SphI GCATGC 2 cut(s) 683, 1207
Sse9I AATT 6 cut(s) 15, 450, 987, 1119, 1179, 1358
SsiI CCGC 3 cut(s) 195, 603, 1259
SspMI CTAG 1 cut(s) 306
StyD4I CCNGG 3 cut(s) 117, 385, 1007
StyI CCWWGG 2 cut(s) 911, 1133
TaaI ACNGT 3 cut(s) 398, 1168, 1251
TaiI ACGT 4 cut(s) 95, 789, 1078, 1355
TaqI TCGA 3 cut(s) 13, 222, 1080
TasI AATT 6 cut(s) 15, 450, 987, 1119, 1179, 1358
TatI WGTACW 1 cut(s) 737
TfiI GAWTC 2 cut(s) 421, 497
Tru1I TTAA 6 cut(s) 48, 233, 297, 708, 953, 1356
Tru9I TTAA 6 cut(s) 48, 233, 297, 708, 953, 1356
TscAI CASTG 3 cut(s) 286, 1173, 1254
TseFI GTSAC 2 cut(s) 503, 1251
TseI GCWGC 3 cut(s) 212, 855, 1097
Tsp45I GTSAC 2 cut(s) 503, 1251
TspDTI ATGAA 6 cut(s) 126, 494, 539, 830, 1102, 1257
TspGWI ACGGA 2 cut(s) 506, 796
TspRI CASTG 3 cut(s) 286, 1173, 1254
Tth111I GACNNNGTC 1 cut(s) 825
XapI RAATTY 2 cut(s) 1179, 1358
XceI RCATGY 3 cut(s) 545, 683, 1207
XmnI GAANNNNTTC 1 cut(s) 84
XspI CTAG 1 cut(s) 306
Zsp2I ATGCAT 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.