Rw3G028650

Diacylglycerol kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
43085145 .. 43094626
9482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G028650.1

Sequence Viewer

Length: 1290 bp
ATGGCCAACTCCAGCGGTGGGTCTGATTTGTTGAAGAGTTTCAAGATTCCCAAGTATGTACTTGAATCCGAATCAAAGCGTGATCGGGAAGATTCTGATGAGCCCGAGTGTCCAGTTTTGGTGTTTATCAACTCCAAAAGTGGTGGTCAGCTTGGTGGCAATCTTCTTGTTTTTGATGTGGGGGAAGAGGCTCCGGATAAGGTGCTGCGCCGAATTTATGTCAATCTAGAAACGCTCAAGCACAAGGGGGATGGATTTGCTACCAAGATTCAAGAGAAAGTGAGGATAATTGTTGCAGGTGGTGATGGAACTACTGGCTGGCTTCTTGGAGTTGTTTCTGATATGAAATTAGCTCATCCGCCACCGATAGCAACAGTACCCTTAGGAACTGGAAACAATCTTCCATTTGCATTTGGCTGGGGGAAGAAGAATCCTGGAACAGATCAACATGCTGTGGAGTCCTTTTTGCATCAAGTAAAGGGAGCCAAGGAAATGAAGATAGACAGCTGGCACCTTCTCATGAGGATGAAGATTCCAAAAGGAGGTCCATTGGATCCCATTGCGCCTCTTGAGCTACCCCATTCTTTGTATGCCTTTGGCCGTGTCTCTAACACAAATGAGCTGAACATGTTCAAAGCCAAACAACACAGCAGAGTACGAAGCACTGATAACTGGCATCTAATTAGCAAAGGAACTTGGGAGTATGCTTCGTACGCTCATCGTCGGCAACTAGGTAATGAAGGCTTTGTGGCCAATAGCGATACATCAAAGTTTGCTCGTTGTAAGAACATGATACATAAACATGAGGACGCTGCCTCACTTCCTTCGAACTCGGGGGGACTGCCCATCTTGAGCCGCCGATCTTTTAGCAACTCCTCAATAATGACAGTTGTATTCACCTCGGCATATGGAGCATCACTTCTACTAGCAACCTCGCTAGGCATAATGAAACCCATAAACCAAAAGGCCGAAGTACCTGTTCTCCTCCACAGACAAAGACCACAGACACGAATGACCGAAATCTCCTCTGCAACTATAAATTCTAGTAACAGGCACAAGATTCAAACCTTCTGGGCACCAAAGTCTCTAATTTATCCGGCTTCTCCTTCAAAATCCAATCAGTGCACGGGAGGCAGTAGCCATCTTCATCTCCCTCATCCGTCTATATATAGGGTCCATGAGAGTATAGCAACCGTTGGACGTGCAAGGACAACAACACGGAATCCCGCCACGTGTCCGACAAGTCTGAGCGTCGTCGCCTCGGTGCCTTACCCACTACCCCTTTATTAG

Protein Analysis

429

Amino Acids

47.01

Weight (kDa)

9.68

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAGK_cat PF00781 38 - 150 1.7e-18 Diacylglycerol kinase catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 287
Acc36I ACCTGC 1 cut(s) 287
AccB1I GGYRCC 3 cut(s) 510, 1075, 1264
AccIII TCCGGA 1 cut(s) 193
AciI CCGC 4 cut(s) 15, 359, 856, 1227
AclWI GGATC 2 cut(s) 548, 561
AcoI YGGCCR 3 cut(s) 3, 598, 750
AcsI RAATTY 2 cut(s) 213, 1039
AcvI CACGTG 1 cut(s) 1233
AfaI GTAC 5 cut(s) 60, 378, 657, 713, 975
AfiI CCNNNNNNNGG 2 cut(s) 18, 542
AflIII ACRYGT 2 cut(s) 627, 1232
AgsI TTSAA 7 cut(s) 34, 43, 65, 272, 634, 1064, 1110
AjiI CACGTC 1 cut(s) 1202
AjnI CCWGG 1 cut(s) 433
AluBI AGCT 5 cut(s) 151, 353, 507, 574, 622
AluI AGCT 5 cut(s) 151, 353, 507, 574, 622
Alw21I GWGCWC 1 cut(s) 1127
Alw26I GTCTC 2 cut(s) 610, 1089
Alw44I GTGCAC 1 cut(s) 1123
AlwI GGATC 2 cut(s) 548, 561
Ama87I CYCGRG 2 cut(s) 104, 832
Aor13HI TCCGGA 1 cut(s) 193
AoxI GGCC 4 cut(s) 3, 598, 750, 966
ApaLI GTGCAC 1 cut(s) 1123
ApeKI GCWGC 2 cut(s) 205, 812
ApoI RAATTY 2 cut(s) 213, 1039
Asp700I GAANNNNTTC 2 cut(s) 38, 629
AspLEI GCGC 2 cut(s) 210, 565
AspS9I GGNCC 2 cut(s) 545, 1174
AsuHPI GGTGA 2 cut(s) 314, 889
AsuII TTCGAA 1 cut(s) 827
AvaI CYCGRG 2 cut(s) 104, 832
AvaII GGWCC 2 cut(s) 545, 1174
AxyI CCTNAGG 1 cut(s) 382
BaeGI GKGCMC 2 cut(s) 1078, 1127
BalI TGGCCA 2 cut(s) 5, 752
BamHI GGATCC 1 cut(s) 553
BanI GGYRCC 3 cut(s) 510, 1075, 1264
BanII GRGCYC 1 cut(s) 105
BbrPI CACGTG 1 cut(s) 1233
Bbv12I GWGCWC 1 cut(s) 1127
BbvI GCAGC 2 cut(s) 192, 799
BccI CCATC 4 cut(s) 245, 299, 854, 1149
BceAI ACGGC 1 cut(s) 585
BciT130I CCWGG 1 cut(s) 435
BcoDI GTCTC 2 cut(s) 610, 1089
BfaI CTAG 5 cut(s) 227, 731, 926, 938, 1044
BfuAI ACCTGC 1 cut(s) 287
BisI GCNGC 3 cut(s) 206, 813, 856
BlsI GCNGC 3 cut(s) 207, 814, 857
Bme1390I CCNGG 1 cut(s) 435
Bme18I GGWCC 2 cut(s) 545, 1174
BmeT110I CYCGRG 2 cut(s) 104, 832
BmgBI CACGTC 1 cut(s) 1202
BmgT120I GGNCC 2 cut(s) 545, 1174
BmiI GGNNCC 7 cut(s) 192, 484, 512, 555, 1077, 1175, 1266
BmrFI CCNGG 1 cut(s) 435
BmsI GCATC 3 cut(s) 478, 685, 923
Bpu14I TTCGAA 1 cut(s) 827
BpuEI CTTGAG 3 cut(s) 221, 590, 871
BsaAI YACGTR 1 cut(s) 1233
BsaJI CCNNGG 3 cut(s) 486, 900, 1260
BsaWI WCCGGW 1 cut(s) 193
BsaXI ACNNNNNCTCC 2 cut(s) 966, 996
Bsc4I CCNNNNNNNGG 2 cut(s) 18, 542
Bse1I ACTGG 4 cut(s) 113, 319, 394, 677
Bse21I CCTNAGG 1 cut(s) 382
Bse3DI GCAATG 1 cut(s) 558
BseAI TCCGGA 1 cut(s) 193
BseBI CCWGG 1 cut(s) 435
BseDI CCNNGG 3 cut(s) 486, 900, 1260
BseGI GGATG 4 cut(s) 256, 355, 531, 1156
BseLI CCNNNNNNNGG 2 cut(s) 18, 542
BseMI GCAATG 1 cut(s) 558
BseMII CTCAG 1 cut(s) 1238
BseNI ACTGG 4 cut(s) 113, 319, 394, 677
BseRI GAGGAG 3 cut(s) 865, 974, 1015
BseSI GKGCMC 2 cut(s) 1078, 1127
BseXI GCAGC 2 cut(s) 192, 799
BseYI CCCAGC 1 cut(s) 417
BshFI GGCC 4 cut(s) 5, 600, 752, 968
BshNI GGYRCC 3 cut(s) 510, 1075, 1264
BsiHKAI GWGCWC 1 cut(s) 1127
BsiHKCI CYCGRG 2 cut(s) 104, 832
BsiSI CCGG 2 cut(s) 194, 1097
BsiWI CGTACG 1 cut(s) 711
BslFI GGGAC 1 cut(s) 852
BslI CCNNNNNNNGG 2 cut(s) 18, 542
BsmAI GTCTC 2 cut(s) 610, 1089
BsmFI GGGAC 1 cut(s) 852
BsnI GGCC 4 cut(s) 5, 600, 752, 968
BsoBI CYCGRG 2 cut(s) 104, 832
Bsp119I TTCGAA 1 cut(s) 827
Bsp1286I GDGCHC 3 cut(s) 105, 1078, 1127
Bsp13I TCCGGA 1 cut(s) 193
Bsp143I GATC 4 cut(s) 82, 442, 553, 860
BspACI CCGC 4 cut(s) 15, 359, 856, 1227
BspANI GGCC 4 cut(s) 5, 600, 752, 968
BspCNI CTCAG 1 cut(s) 1239
BspEI TCCGGA 1 cut(s) 193
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 7 cut(s) 192, 484, 512, 555, 1077, 1175, 1266
BspMI ACCTGC 1 cut(s) 287
BspPI GGATC 2 cut(s) 548, 561
BspT104I TTCGAA 1 cut(s) 827
BspT107I GGYRCC 3 cut(s) 510, 1075, 1264
BsrDI GCAATG 1 cut(s) 558
BsrI ACTGG 4 cut(s) 113, 319, 394, 677
BssECI CCNNGG 3 cut(s) 486, 900, 1260
BssMI GATC 4 cut(s) 82, 442, 553, 860
BssT1I CCWWGG 1 cut(s) 486
Bst2UI CCWGG 1 cut(s) 435
Bst4CI ACNGT 3 cut(s) 376, 889, 1195
Bst6I CTCTTC 2 cut(s) 29, 180
BstBAI YACGTR 1 cut(s) 1233
BstBI TTCGAA 1 cut(s) 827
BstC8I GCNNGC 2 cut(s) 320, 509
BstDEI CTNAG 2 cut(s) 382, 1247
BstF5I GGATG 4 cut(s) 256, 355, 531, 1156
BstHHI GCGC 2 cut(s) 210, 565
BstKTI GATC 4 cut(s) 85, 445, 556, 863
BstMAI GTCTC 2 cut(s) 610, 1089
BstMBI GATC 4 cut(s) 82, 442, 553, 860
BstMWI GCNNNNNNNGC 4 cut(s) 571, 713, 911, 1131
BstNI CCWGG 1 cut(s) 435
BstNSI RCATGY 2 cut(s) 452, 631
BstSCI CCNGG 1 cut(s) 433
BstSLI GKGCMC 2 cut(s) 1078, 1127
BstV1I GCAGC 2 cut(s) 192, 799
BstX2I RGATCY 1 cut(s) 553
BstYI RGATCY 1 cut(s) 553
Bsu36I CCTNAGG 1 cut(s) 382
BsuRI GGCC 4 cut(s) 5, 600, 752, 968
BtrI CACGTC 1 cut(s) 1202
BtsCI GGATG 4 cut(s) 256, 355, 531, 1156
BtsIMutI CAGTG 2 cut(s) 663, 1127
BveI ACCTGC 1 cut(s) 287
Cac8I GCNNGC 2 cut(s) 320, 509
CciI TCATGA 1 cut(s) 519
CfoI GCGC 2 cut(s) 210, 565
Cfr13I GGNCC 2 cut(s) 545, 1174
CseI GACGC 2 cut(s) 818, 1240
Csp6I GTAC 5 cut(s) 59, 377, 656, 712, 974
CspCI CAANNNNNGTGG 2 cut(s) 124, 159
CviAII CATG 6 cut(s) 449, 520, 628, 790, 803, 1178
CviQI GTAC 5 cut(s) 59, 377, 656, 712, 974
DdeI CTNAG 2 cut(s) 382, 1247
DpnI GATC 4 cut(s) 84, 444, 555, 862
DpnII GATC 4 cut(s) 82, 442, 553, 860
EaeI YGGCCR 3 cut(s) 3, 598, 750
Eam1104I CTCTTC 2 cut(s) 29, 180
EarI CTCTTC 2 cut(s) 29, 180
EciI GGCGGA 1 cut(s) 348
Eco130I CCWWGG 1 cut(s) 486
Eco24I GRGCYC 1 cut(s) 105
Eco47I GGWCC 2 cut(s) 545, 1174
Eco72I CACGTG 1 cut(s) 1233
Eco81I CCTNAGG 1 cut(s) 382
Eco88I CYCGRG 2 cut(s) 104, 832
EcoRII CCWGG 1 cut(s) 433
EcoT14I CCWWGG 1 cut(s) 486
EcoT38I GRGCYC 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 486
FaeI CATG 6 cut(s) 452, 523, 631, 793, 806, 1181
FaqI GGGAC 1 cut(s) 852
FatI CATG 6 cut(s) 448, 519, 627, 789, 802, 1177
FauI CCCGC 1 cut(s) 1234
FauNDI CATATG 1 cut(s) 907
Fnu4HI GCNGC 3 cut(s) 206, 813, 856
FokI GGATG 4 cut(s) 263, 342, 538, 1143
FriOI GRGCYC 1 cut(s) 105
Fsp4HI GCNGC 3 cut(s) 206, 813, 856
FspBI CTAG 5 cut(s) 227, 731, 926, 938, 1044
GlaI GCGC 2 cut(s) 209, 564
GluI GCNGC 3 cut(s) 206, 813, 856
GsaI CCCAGC 1 cut(s) 421
HaeIII GGCC 4 cut(s) 5, 600, 752, 968
HapII CCGG 2 cut(s) 194, 1097
HgaI GACGC 2 cut(s) 818, 1240
HhaI GCGC 2 cut(s) 210, 565
Hin1II CATG 6 cut(s) 452, 523, 631, 793, 806, 1181
Hin6I GCGC 2 cut(s) 208, 563
HinP1I GCGC 2 cut(s) 208, 563
HpaII CCGG 2 cut(s) 194, 1097
HphI GGTGA 2 cut(s) 314, 889
Hpy166II GTNNAC 1 cut(s) 1125
Hpy188I TCNGA 6 cut(s) 25, 70, 97, 340, 1239, 1248
Hpy188III TCNNGA 8 cut(s) 43, 86, 194, 227, 272, 520, 569, 850
Hpy8I GTNNAC 1 cut(s) 1125
Hpy99I CGWCG 3 cut(s) 726, 1256, 1259
HpyAV CCTTC 5 cut(s) 524, 734, 834, 1078, 1116
HpyCH4III ACNGT 3 cut(s) 376, 889, 1195
HpyCH4IV ACGT 2 cut(s) 1201, 1232
HpyCH4V TGCA 6 cut(s) 296, 410, 469, 1031, 1125, 1205
HpyF10VI GCNNNNNNNGC 4 cut(s) 571, 713, 911, 1131
HpyF3I CTNAG 2 cut(s) 382, 1247
HpySE526I ACGT 2 cut(s) 1201, 1232
Hsp92II CATG 6 cut(s) 452, 523, 631, 793, 806, 1181
HspAI GCGC 2 cut(s) 208, 563
Kpn2I TCCGGA 1 cut(s) 193
Kzo9I GATC 4 cut(s) 82, 442, 553, 860
LmnI GCTCC 3 cut(s) 196, 482, 911
Lsp1109I GCAGC 2 cut(s) 192, 799
LweI GCATC 3 cut(s) 478, 685, 923
MaeI CTAG 5 cut(s) 227, 731, 926, 938, 1044
MaeII ACGT 2 cut(s) 1201, 1232
MaeIII GTNAC 1 cut(s) 1046
MalI GATC 4 cut(s) 84, 444, 555, 862
MboI GATC 4 cut(s) 82, 442, 553, 860
MflI RGATCY 1 cut(s) 553
MhlI GDGCHC 3 cut(s) 105, 1078, 1127
MlsI TGGCCA 2 cut(s) 5, 752
MluCI AATT 6 cut(s) 213, 288, 347, 681, 1039, 1089
MluNI TGGCCA 2 cut(s) 5, 752
MlyI GAGTC 1 cut(s) 467
MmeI TCCRAC 2 cut(s) 1177, 1262
Mox20I TGGCCA 2 cut(s) 5, 752
MroI TCCGGA 1 cut(s) 193
MroXI GAANNNNTTC 2 cut(s) 38, 629
MscI TGGCCA 2 cut(s) 5, 752
MslI CAYNNNNRTG 2 cut(s) 524, 801
Msp20I TGGCCA 2 cut(s) 5, 752
MspA1I CMGCKG 2 cut(s) 15, 507
MspI CCGG 2 cut(s) 194, 1097
MspR9I CCNGG 1 cut(s) 435
MvaI CCWGG 1 cut(s) 435
MwoI GCNNNNNNNGC 4 cut(s) 571, 713, 911, 1131
NdeI CATATG 1 cut(s) 907
NdeII GATC 4 cut(s) 82, 442, 553, 860
NlaIII CATG 6 cut(s) 452, 523, 631, 793, 806, 1181
NlaIV GGNNCC 7 cut(s) 192, 484, 512, 555, 1077, 1175, 1266
NmeAIII GCCGAG 1 cut(s) 881
NspI RCATGY 2 cut(s) 452, 631
NspV TTCGAA 1 cut(s) 827
PagI TCATGA 1 cut(s) 519
PaqCI CACCTGC 1 cut(s) 287
PciI ACATGT 1 cut(s) 627
PdmI GAANNNNTTC 2 cut(s) 38, 629
PfeI GAWTC 9 cut(s) 46, 65, 71, 92, 268, 430, 532, 1060, 1222
Pfl23II CGTACG 1 cut(s) 711
PfoI TCCNGGA 1 cut(s) 433
PkrI GCNGC 3 cut(s) 207, 814, 857
PleI GAGTC 1 cut(s) 466
PmaCI CACGTG 1 cut(s) 1233
PmlI CACGTG 1 cut(s) 1233
PpsI GAGTC 1 cut(s) 466
Ppu21I YACGTR 1 cut(s) 1233
PscI ACATGT 1 cut(s) 627
Psp6I CCWGG 1 cut(s) 433
PspCI CACGTG 1 cut(s) 1233
PspFI CCCAGC 1 cut(s) 417
PspGI CCWGG 1 cut(s) 433
PspLI CGTACG 1 cut(s) 711
PspN4I GGNNCC 7 cut(s) 192, 484, 512, 555, 1077, 1175, 1266
PspPI GGNCC 2 cut(s) 545, 1174
PsuI RGATCY 1 cut(s) 553
PvuII CAGCTG 1 cut(s) 507
RsaI GTAC 5 cut(s) 60, 378, 657, 713, 975
RsaNI GTAC 5 cut(s) 59, 377, 656, 712, 974
RseI CAYNNNNRTG 2 cut(s) 524, 801
SatI GCNGC 3 cut(s) 206, 813, 856
Sau3AI GATC 4 cut(s) 82, 442, 553, 860
Sau96I GGNCC 2 cut(s) 545, 1174
SchI GAGTC 1 cut(s) 467
ScrFI CCNGG 1 cut(s) 435
SduI GDGCHC 3 cut(s) 105, 1078, 1127
SfaNI GCATC 3 cut(s) 478, 685, 923
SfuI TTCGAA 1 cut(s) 827
SinI GGWCC 2 cut(s) 545, 1174
SmiMI CAYNNNNRTG 2 cut(s) 524, 801
SmlI CTYRAG 3 cut(s) 236, 569, 850
SmoI CTYRAG 3 cut(s) 236, 569, 850
Sse9I AATT 6 cut(s) 213, 288, 347, 681, 1039, 1089
SsiI CCGC 4 cut(s) 15, 359, 856, 1227
SspMI CTAG 5 cut(s) 227, 731, 926, 938, 1044
StyD4I CCNGG 1 cut(s) 433
StyI CCWWGG 1 cut(s) 486
TaaI ACNGT 3 cut(s) 376, 889, 1195
TaiI ACGT 2 cut(s) 1204, 1235
TaqI TCGA 1 cut(s) 827
TaqII GACCGA 1 cut(s) 1031
TasI AATT 6 cut(s) 213, 288, 347, 681, 1039, 1089
TatI WGTACW 1 cut(s) 58
TauI GCSGC 1 cut(s) 858
TfiI GAWTC 9 cut(s) 46, 65, 71, 92, 268, 430, 532, 1060, 1222
TscAI CASTG 2 cut(s) 670, 1127
TseI GCWGC 2 cut(s) 205, 812
TspDTI ATGAA 6 cut(s) 359, 509, 542, 753, 962, 1136
TspGWI ACGGA 2 cut(s) 1149, 1234
TspRI CASTG 2 cut(s) 670, 1127
VneI GTGCAC 1 cut(s) 1123
VpaK11BI GGWCC 2 cut(s) 545, 1174
XapI RAATTY 2 cut(s) 213, 1039
XbaI TCTAGA 1 cut(s) 226
XceI RCATGY 2 cut(s) 452, 631
XmnI GAANNNNTTC 2 cut(s) 38, 629
XspI CTAG 5 cut(s) 227, 731, 926, 938, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.