Rw0G008460

Diacylglycerol kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00322
Physical Location & Seq
Forward (+)
50 .. 11884
11835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G008460.1

Sequence Viewer

Length: 1323 bp
ATGAAAGGACATGACCGCCCGGATCTGGACACGTGTCCAAAAGTTGACCCTGTGTACACCCCTGTACGCGAGCCGTCACCTCGGTTACATAAATCATTAATGCGAGGTTATAGAAAGGGAAAGACACCTCCTTTCGCACTACTAGCAAACCCCAGCGGAACACGTGTCTCCCACTGTTCTCTATCACATAATACACTAGAGATAGCATACGAGACAAAAACAAAGGATAAACGATACAAAGGCCAAGTTTTGTCTGAAATGGCCAACTCCAGCTGTGGGTCTGATTTCTTGAAGAGTTTCAAGATTCCCAAGTATGTACTTGAATCCGAATCAAAGCGTGATGGGGAAGATTCTGATGTGCCCGAGTGTCCAGTTTTGGTGTTTATCAACTCCAAAAGTGGTGGTCAGCTTGGTGGCAATCTTCTTGTGATGTACAGTCAGCTCCTCAATGACTGGCAGGTTTTTGATGTGGGGGAAGAGGCTCCGGATAAGGTGCTGCGCCGAATTTATGTCAATTTAGAAACGCTCAAGCACAAGGGGGATGGATTTGCTACCAAGATTCAAGACAAACTGAGGATAATTGTTGCAGGTGGTAATGTAACTGCTGGCTGGCTTCTTGGAGTTGTTTCTGATATGAAATTAGCTCATCCGCCACCGATAACAACAGTACCCTTAGGAACTGGAAACAATCTTCCATTTGCATTTGGCTGGGGGAAGAAGAATCCTGGAACAGATCAACATGCTGTGGAGTCCTTTTTGCATCAAGTAAAGGGAGCCAAGGAAATGAAGATAGACAGCTGGCACCTTCTCATGAGGATGAAGATTCCAAAAGGAGGCCAATTGGATCCCATTGCGCCTCTTGAGCTACCCCATTCTTTGCATGCCTTTGGCCGTGTCTCTGACACAAATGAGCTGAACATGGAGGGCTTCCACACATTTCGTGGGGGATTTTGGAATTACTTCAGTATGGGAATGGATGCTGAAGTATCATATGTCTATATTTTCGTATTCTCTACTCATAAATTCCAACTTGCACAAGCACATTTTCTGTTAGTGCCTCCATTTGAAATGGAAAATACACCCATAGCTTTCAATCCATATAAAGGAAACACTAGACATACAGACCTACAATCCCACAAAGTATCAGAACTTATGCTCTCACAAGGTGAGAACTCTAGGACTCCAAACTTTTTGCAAACTATATCATCCACTATATCATCATCCGTCTCTGACCTTCTCTTAAATCCTCAGGTATTGGCATCAAAACCCTGGTCCCAACCTGAAGTAACCCCCAAAATAGGTACACACATAGATATAGATTGA

Protein Analysis

440

Amino Acids

49.01

Weight (kDa)

8.18

Isoelectric Point (pI)

32.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAGK_cat PF00781 124 - 247 1.4e-13 Diacylglycerol kinase catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 578
Acc36I ACCTGC 2 cut(s) 448, 578
AccB1I GGYRCC 1 cut(s) 801
AccII CGCG 1 cut(s) 69
AccIII TCCGGA 1 cut(s) 484
AciI CCGC 3 cut(s) 16, 156, 650
AclWI GGATC 3 cut(s) 30, 839, 852
AcoI YGGCCR 2 cut(s) 261, 889
AcsI RAATTY 2 cut(s) 504, 1022
AcuI CTGAAG 3 cut(s) 946, 1002, 1302
AcvI CACGTG 2 cut(s) 33, 164
AdeI CACNNNGTG 1 cut(s) 1166
AfaI GTAC 6 cut(s) 56, 66, 318, 434, 669, 1303
AfiI CCNNNNNNNGG 5 cut(s) 25, 276, 833, 1103, 1298
AflIII ACRYGT 4 cut(s) 30, 32, 161, 163
AgsI TTSAA 6 cut(s) 292, 301, 323, 563, 1067, 1093
AjnI CCWGG 2 cut(s) 724, 1268
AluBI AGCT 8 cut(s) 273, 409, 442, 644, 798, 865, 913, 1088
AluI AGCT 8 cut(s) 273, 409, 442, 644, 798, 865, 913, 1088
Alw26I GTCTC 4 cut(s) 172, 206, 901, 1231
AlwI GGATC 3 cut(s) 30, 839, 852
Ama87I CYCGRG 1 cut(s) 362
Aor13HI TCCGGA 1 cut(s) 484
AoxI GGCC 4 cut(s) 241, 261, 835, 889
ApeKI GCWGC 1 cut(s) 496
ApoI RAATTY 2 cut(s) 504, 1022
ArsI GACNNNNNNTTYG 2 cut(s) 1256, 1288
AseI ATTAAT 1 cut(s) 98
Asp700I GAANNNNTTC 2 cut(s) 296, 959
AspLEI GCGC 2 cut(s) 501, 856
AspS9I GGNCC 1 cut(s) 1272
AsuC2I CCSGG 1 cut(s) 20
AsuHPI GGTGA 2 cut(s) 69, 1178
AvaI CYCGRG 1 cut(s) 362
AvaII GGWCC 1 cut(s) 1272
AxyI CCTNAGG 2 cut(s) 673, 1248
BaeGI GKGCMC 1 cut(s) 363
BaeI ACNNNNGTAYC 2 cut(s) 651, 684
BalI TGGCCA 1 cut(s) 263
BamHI GGATCC 1 cut(s) 844
BanI GGYRCC 1 cut(s) 801
BbrPI CACGTG 2 cut(s) 33, 164
BbvI GCAGC 1 cut(s) 483
BccI CCATC 2 cut(s) 335, 536
BceAI ACGGC 2 cut(s) 58, 876
BciT130I CCWGG 2 cut(s) 726, 1270
BcnI CCSGG 1 cut(s) 20
BcoDI GTCTC 4 cut(s) 172, 206, 901, 1231
BfaI CTAG 4 cut(s) 143, 197, 1113, 1176
BfuAI ACCTGC 2 cut(s) 448, 578
BisI GCNGC 1 cut(s) 497
BlsI GCNGC 1 cut(s) 498
Bme1390I CCNGG 3 cut(s) 20, 726, 1270
Bme18I GGWCC 1 cut(s) 1272
BmeT110I CYCGRG 1 cut(s) 362
BmgT120I GGNCC 1 cut(s) 1272
BmiI GGNNCC 5 cut(s) 483, 775, 803, 846, 1274
BmrFI CCNGG 3 cut(s) 20, 726, 1270
BmsI GCATC 3 cut(s) 769, 967, 1268
BoxI GACNNNNGTC 1 cut(s) 33
BpmI CTGGAG 1 cut(s) 253
BpuEI CTTGAG 2 cut(s) 512, 881
BpuMI CCSGG 1 cut(s) 20
BsaAI YACGTR 2 cut(s) 33, 164
BsaJI CCNNGG 3 cut(s) 80, 777, 1268
BsaWI WCCGGW 1 cut(s) 484
Bsc4I CCNNNNNNNGG 5 cut(s) 25, 276, 833, 1103, 1298
Bse1I ACTGG 3 cut(s) 371, 458, 685
Bse21I CCTNAGG 2 cut(s) 673, 1248
Bse3DI GCAATG 1 cut(s) 849
BseAI TCCGGA 1 cut(s) 484
BseBI CCWGG 2 cut(s) 726, 1270
BseDI CCNNGG 3 cut(s) 80, 777, 1268
BseGI GGATG 6 cut(s) 547, 646, 822, 982, 1205, 1220
BseLI CCNNNNNNNGG 5 cut(s) 25, 276, 833, 1103, 1298
BseMI GCAATG 1 cut(s) 849
BseMII CTCAG 2 cut(s) 563, 1262
BseNI ACTGG 3 cut(s) 371, 458, 685
BseRI GAGGAG 1 cut(s) 434
BseSI GKGCMC 1 cut(s) 363
BseXI GCAGC 1 cut(s) 483
BseYI CCCAGC 2 cut(s) 152, 708
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 4 cut(s) 243, 263, 837, 891
BshNI GGYRCC 1 cut(s) 801
BsiHKCI CYCGRG 1 cut(s) 362
BsiSI CCGG 2 cut(s) 20, 485
BslFI GGGAC 1 cut(s) 1258
BslI CCNNNNNNNGG 5 cut(s) 25, 276, 833, 1103, 1298
BsmAI GTCTC 4 cut(s) 172, 206, 901, 1231
BsmBI CGTCTC 1 cut(s) 1231
BsmFI GGGAC 1 cut(s) 1258
BsnI GGCC 4 cut(s) 243, 263, 837, 891
BsoBI CYCGRG 1 cut(s) 362
Bsp1286I GDGCHC 1 cut(s) 363
Bsp13I TCCGGA 1 cut(s) 484
Bsp1407I TGTACA 2 cut(s) 54, 432
Bsp143I GATC 3 cut(s) 22, 733, 844
BspACI CCGC 3 cut(s) 16, 156, 650
BspANI GGCC 4 cut(s) 243, 263, 837, 891
BspCNI CTCAG 2 cut(s) 564, 1261
BspEI TCCGGA 1 cut(s) 484
BspFNI CGCG 1 cut(s) 69
BspHI TCATGA 1 cut(s) 810
BspLI GGNNCC 5 cut(s) 483, 775, 803, 846, 1274
BspMI ACCTGC 2 cut(s) 448, 578
BspPI GGATC 3 cut(s) 30, 839, 852
BspT107I GGYRCC 1 cut(s) 801
BsrDI GCAATG 1 cut(s) 849
BsrGI TGTACA 2 cut(s) 54, 432
BsrI ACTGG 3 cut(s) 371, 458, 685
BssECI CCNNGG 3 cut(s) 80, 777, 1268
BssMI GATC 3 cut(s) 22, 733, 844
BssT1I CCWWGG 1 cut(s) 777
Bst2UI CCWGG 2 cut(s) 726, 1270
Bst4CI ACNGT 3 cut(s) 176, 437, 667
Bst6I CTCTTC 2 cut(s) 287, 471
BstAUI TGTACA 2 cut(s) 54, 432
BstBAI YACGTR 2 cut(s) 33, 164
BstC8I GCNNGC 5 cut(s) 71, 607, 611, 800, 882
BstDEI CTNAG 3 cut(s) 572, 673, 1248
BstF5I GGATG 6 cut(s) 547, 646, 822, 982, 1205, 1220
BstFNI CGCG 1 cut(s) 69
BstHHI GCGC 2 cut(s) 501, 856
BstKTI GATC 3 cut(s) 25, 736, 847
BstMAI GTCTC 4 cut(s) 172, 206, 901, 1231
BstMBI GATC 3 cut(s) 22, 733, 844
BstMWI GCNNNNNNNGC 2 cut(s) 143, 862
BstNI CCWGG 2 cut(s) 726, 1270
BstNSI RCATGY 2 cut(s) 743, 884
BstPAI GACNNNNGTC 1 cut(s) 33
BstSCI CCNGG 3 cut(s) 18, 724, 1268
BstSLI GKGCMC 1 cut(s) 363
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 1 cut(s) 483
BstX2I RGATCY 2 cut(s) 22, 844
BstYI RGATCY 2 cut(s) 22, 844
Bsu36I CCTNAGG 2 cut(s) 673, 1248
BsuRI GGCC 4 cut(s) 243, 263, 837, 891
BtsCI GGATG 6 cut(s) 547, 646, 822, 982, 1205, 1220
BtsIMutI CAGTG 1 cut(s) 172
BveI ACCTGC 2 cut(s) 448, 578
Cac8I GCNNGC 5 cut(s) 71, 607, 611, 800, 882
CciI TCATGA 1 cut(s) 810
CfoI GCGC 2 cut(s) 501, 856
Cfr13I GGNCC 1 cut(s) 1272
Csp6I GTAC 6 cut(s) 55, 65, 317, 433, 668, 1302
CspCI CAANNNNNGTGG 2 cut(s) 382, 417
CviAII CATG 5 cut(s) 11, 740, 811, 881, 919
CviQI GTAC 6 cut(s) 55, 65, 317, 433, 668, 1302
DdeI CTNAG 3 cut(s) 572, 673, 1248
DpnI GATC 3 cut(s) 24, 735, 846
DpnII GATC 3 cut(s) 22, 733, 844
DraIII CACNNNGTG 1 cut(s) 1166
EaeI YGGCCR 2 cut(s) 261, 889
Eam1104I CTCTTC 2 cut(s) 287, 471
EarI CTCTTC 2 cut(s) 287, 471
EciI GGCGGA 1 cut(s) 639
Eco130I CCWWGG 1 cut(s) 777
Eco47I GGWCC 1 cut(s) 1272
Eco57I CTGAAG 3 cut(s) 946, 1002, 1302
Eco72I CACGTG 2 cut(s) 33, 164
Eco81I CCTNAGG 2 cut(s) 673, 1248
Eco88I CYCGRG 1 cut(s) 362
EcoRII CCWGG 2 cut(s) 724, 1268
EcoT14I CCWWGG 1 cut(s) 777
ErhI CCWWGG 1 cut(s) 777
Esp3I CGTCTC 1 cut(s) 1231
FaeI CATG 5 cut(s) 14, 743, 814, 884, 922
FaqI GGGAC 1 cut(s) 1258
FatI CATG 5 cut(s) 10, 739, 810, 880, 918
FauNDI CATATG 1 cut(s) 991
Fnu4HI GCNGC 1 cut(s) 497
FokI GGATG 6 cut(s) 554, 633, 829, 989, 1192, 1207
Fsp4HI GCNGC 1 cut(s) 497
FspBI CTAG 4 cut(s) 143, 197, 1113, 1176
GlaI GCGC 2 cut(s) 500, 855
GluI GCNGC 1 cut(s) 497
GsaI CCCAGC 2 cut(s) 156, 712
GsuI CTGGAG 1 cut(s) 253
HaeIII GGCC 4 cut(s) 243, 263, 837, 891
HapII CCGG 2 cut(s) 20, 485
HhaI GCGC 2 cut(s) 501, 856
Hin1II CATG 5 cut(s) 14, 743, 814, 884, 922
Hin6I GCGC 2 cut(s) 499, 854
HinP1I GCGC 2 cut(s) 499, 854
HincII GTYRAC 1 cut(s) 46
HindII GTYRAC 1 cut(s) 46
HinfI GANTC 9 cut(s) 304, 323, 329, 350, 559, 721, 749, 823, 1180
HpaII CCGG 2 cut(s) 20, 485
HphI GGTGA 2 cut(s) 69, 1178
Hpy166II GTNNAC 4 cut(s) 46, 55, 57, 1304
Hpy188I TCNGA 8 cut(s) 256, 283, 328, 355, 631, 901, 1147, 1231
Hpy188III TCNNGA 7 cut(s) 26, 289, 301, 485, 563, 811, 860
Hpy8I GTNNAC 4 cut(s) 46, 55, 57, 1304
HpyAV CCTTC 2 cut(s) 815, 1244
HpyCH4III ACNGT 3 cut(s) 176, 437, 667
HpyCH4IV ACGT 2 cut(s) 32, 163
HpyCH4V TGCA 6 cut(s) 587, 701, 760, 880, 1034, 1195
HpyF10VI GCNNNNNNNGC 2 cut(s) 143, 862
HpyF3I CTNAG 3 cut(s) 572, 673, 1248
HpySE526I ACGT 2 cut(s) 32, 163
Hsp92II CATG 5 cut(s) 14, 743, 814, 884, 922
HspAI GCGC 2 cut(s) 499, 854
Kpn2I TCCGGA 1 cut(s) 484
Kzo9I GATC 3 cut(s) 22, 733, 844
LmnI GCTCC 3 cut(s) 447, 487, 773
Lsp1109I GCAGC 1 cut(s) 483
LweI GCATC 3 cut(s) 769, 967, 1268
MaeI CTAG 4 cut(s) 143, 197, 1113, 1176
MaeII ACGT 2 cut(s) 32, 163
MaeIII GTNAC 4 cut(s) 75, 84, 598, 1285
MalI GATC 3 cut(s) 24, 735, 846
MboI GATC 3 cut(s) 22, 733, 844
MboII GAAGA 9 cut(s) 304, 359, 413, 488, 683, 727, 730, 799, 832
MfeI CAATTG 1 cut(s) 839
MflI RGATCY 2 cut(s) 22, 844
MhlI GDGCHC 1 cut(s) 363
MlsI TGGCCA 1 cut(s) 263
MluCI AATT 7 cut(s) 504, 514, 579, 638, 839, 955, 1022
MluNI TGGCCA 1 cut(s) 263
MlyI GAGTC 2 cut(s) 758, 1174
MmeI TCCRAC 1 cut(s) 1051
Mox20I TGGCCA 1 cut(s) 263
MroI TCCGGA 1 cut(s) 484
MroXI GAANNNNTTC 2 cut(s) 296, 959
MscI TGGCCA 1 cut(s) 263
MseI TTAA 2 cut(s) 98, 1241
MslI CAYNNNNRTG 1 cut(s) 815
Msp20I TGGCCA 1 cut(s) 263
MspA1I CMGCKG 3 cut(s) 156, 273, 798
MspI CCGG 2 cut(s) 20, 485
MspR9I CCNGG 3 cut(s) 20, 726, 1270
MunI CAATTG 1 cut(s) 839
MvaI CCWGG 2 cut(s) 726, 1270
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 2 cut(s) 143, 862
NciI CCSGG 1 cut(s) 20
NdeI CATATG 1 cut(s) 991
NdeII GATC 3 cut(s) 22, 733, 844
NlaIII CATG 5 cut(s) 14, 743, 814, 884, 922
NlaIV GGNNCC 5 cut(s) 483, 775, 803, 846, 1274
NmuCI GTSAC 1 cut(s) 75
NspI RCATGY 2 cut(s) 743, 884
PaeI GCATGC 1 cut(s) 884
PagI TCATGA 1 cut(s) 810
PaqCI CACCTGC 1 cut(s) 578
PdmI GAANNNNTTC 2 cut(s) 296, 959
PfeI GAWTC 7 cut(s) 304, 323, 329, 350, 559, 721, 823
PfoI TCCNGGA 1 cut(s) 724
PkrI GCNGC 1 cut(s) 498
PleI GAGTC 2 cut(s) 757, 1174
PmaCI CACGTG 2 cut(s) 33, 164
PmlI CACGTG 2 cut(s) 33, 164
PpsI GAGTC 2 cut(s) 757, 1174
Ppu21I YACGTR 2 cut(s) 33, 164
PshAI GACNNNNGTC 1 cut(s) 33
PshBI ATTAAT 1 cut(s) 98
Psp6I CCWGG 2 cut(s) 724, 1268
PspCI CACGTG 2 cut(s) 33, 164
PspFI CCCAGC 2 cut(s) 152, 708
PspGI CCWGG 2 cut(s) 724, 1268
PspN4I GGNNCC 5 cut(s) 483, 775, 803, 846, 1274
PspPI GGNCC 1 cut(s) 1272
PsuI RGATCY 2 cut(s) 22, 844
PvuII CAGCTG 2 cut(s) 273, 798
RsaI GTAC 6 cut(s) 56, 66, 318, 434, 669, 1303
RsaNI GTAC 6 cut(s) 55, 65, 317, 433, 668, 1302
RseI CAYNNNNRTG 1 cut(s) 815
SaqAI TTAA 2 cut(s) 98, 1241
SatI GCNGC 1 cut(s) 497
Sau3AI GATC 3 cut(s) 22, 733, 844
Sau96I GGNCC 1 cut(s) 1272
SchI GAGTC 2 cut(s) 758, 1174
ScrFI CCNGG 3 cut(s) 20, 726, 1270
SduI GDGCHC 1 cut(s) 363
SfaNI GCATC 3 cut(s) 769, 967, 1268
SinI GGWCC 1 cut(s) 1272
SmiMI CAYNNNNRTG 1 cut(s) 815
SmlI CTYRAG 2 cut(s) 527, 860
SmoI CTYRAG 2 cut(s) 527, 860
SphI GCATGC 1 cut(s) 884
Sse9I AATT 7 cut(s) 504, 514, 579, 638, 839, 955, 1022
SsiI CCGC 3 cut(s) 16, 156, 650
SspMI CTAG 4 cut(s) 143, 197, 1113, 1176
StyD4I CCNGG 3 cut(s) 18, 724, 1268
StyI CCWWGG 1 cut(s) 777
TaaI ACNGT 3 cut(s) 176, 437, 667
TaiI ACGT 2 cut(s) 35, 166
TasI AATT 7 cut(s) 504, 514, 579, 638, 839, 955, 1022
TatI WGTACW 3 cut(s) 54, 316, 432
TfiI GAWTC 7 cut(s) 304, 323, 329, 350, 559, 721, 823
Tru1I TTAA 2 cut(s) 98, 1241
Tru9I TTAA 2 cut(s) 98, 1241
TscAI CASTG 1 cut(s) 179
TseFI GTSAC 1 cut(s) 75
TseI GCWGC 1 cut(s) 496
Tsp45I GTSAC 1 cut(s) 75
TspDTI ATGAA 4 cut(s) 17, 650, 800, 833
TspGWI ACGGA 1 cut(s) 1213
TspRI CASTG 1 cut(s) 179
VpaK11BI GGWCC 1 cut(s) 1272
VspI ATTAAT 1 cut(s) 98
XapI RAATTY 2 cut(s) 504, 1022
XceI RCATGY 2 cut(s) 743, 884
XcmI CCANNNNNNNNNTGG 1 cut(s) 938
XmnI GAANNNNTTC 2 cut(s) 296, 959
XspI CTAG 4 cut(s) 143, 197, 1113, 1176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.