Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001034

Physical Location & Seq

Genomic Coordinates Reverse (-)

7028846 .. 7031636

Gene Structure 2791 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1085700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 711 bp

ATGATAAGAGGCATAATGGCAAATTCTCACTTTGGGGAGGATTTCTTGAAGGATTTCAGAATTCCTAAGTATGTACTAGTGCCTGAATCAAAGAGTGAACATGTTGCTGATGTACCGCAGTGTCCGGTTTTAGTGTTTATCAACTCCAAAAGTGGTGGCCAGCTTGGTGGGAATCTTCTTGTAACATACCGTTCCCTTCTAAACGAAAATCAGGTTTATGATTTGGGGCAAGAGGCTCCTGATAAGGTGCTGAGCCAAATCTATGCGAATCTTGAAATGCTCAAGCGCAATGGAGATGAAGTCGCTACAAAGATTCAAGAGAGTTTGAGAATCATTGTTGCAGGTGGTGATGGAACTGCTGGTTGGCTTCTTGGAGTTGTTTCTGATCTCAGATTATCTCATTCGCCGCCAATAGCCACTGTACCACTGGGAACTGGAAACAATCTTCCTTTTGCATTTGGATGGGGGAAGAAGAATCCTGGGACAGATCCTCAATCCGTGAAGCATTTTTTGGACCAAGTAAAGAGAGCCAAGGAAATGAAAATAGACAGCTGGCACATTCTCATGAGGATGAGGATACCAAAAGAAGGTCCGTGTGATCCCATTGCGCCTCTTGACCTACCACATTCTTTGCATGCATTTGGCCGTGTCTCTGATTCAAATGAGCTGAACGTGGTAATTATCCCTATTCTCAATATAGTAGAGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001775 GO:0003674 GO:0003824 GO:0004143 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005886 GO:0006629 GO:0006793 GO:0006796 GO:0006950 GO:0007596 GO:0007599 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009611 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0030168 GO:0030258 GO:0030425 GO:0031974 GO:0031981 GO:0032501 GO:0032991 GO:0036477 GO:0042060 GO:0042995 GO:0043005 GO:0043197 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044255 GO:0044309 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044456 GO:0044463 GO:0044464 GO:0045202 GO:0046834 GO:0050817 GO:0050878 GO:0050896 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071944 GO:0097447 GO:0097458 GO:0098794 GO:0120025 GO:0120038

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 ko04070 ko04072 ko05231 map00561 map00564 map01100 map01110 map04070 map04072 map05231

Pfam Domains

Protein Families

DAGK_acc DAGK_cat

Protein Analysis

237

Amino Acids

26.03

Weight (kDa)

6.38

Isoelectric Point (pI)

37.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGK_cat	PF00781	42 - 167	3.3e-21	Diacylglycerol kinase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001034)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20900 AT2G20900 AT2G20900 AT2G20900
fragaria_vesca	FvH4_3g21140 FvH4_3g21140 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410
malus_domestica	MD09G1097300.v1.1 MD11G1235100.v1.1 MD17G1085600.v1.1 MD17G1085700.v1.1
prunus_persica	Prupe.3G228600_v2.0.a1 Prupe.3G228600_v2.0.a1 Prupe.4G191900_v2.0.a1 Prupe.4G191900_v2.0.a1 Prupe.4G191900_v2.0.a1
pyrus_communis	pycom09g02160 pycom11g20670 pycom17g08330
rosa_chinensis	RchiOBHm_Chr2g0161401 RchiOBHm_Chr5g0036201
rosa_laevigata	RLG00000008429 RLG00000020681 RLG00000021281 RLG00000022547 RLG00000033679
rosa_multiflora	Rmu_co8358135.1_g000001 Rmu_sc0000247.1_g000005 Rmu_sc0003548.1_g000003 Rmu_sc0040460.1_g000002
rosa_roxburghii	Rroxscaffold_1G00044560 Rroxscaffold_2G00088870
rosa_rugosa	Rorug02G0489000 Rorug02G0489100 Rorug05G0153500 Rorug05G0153600.1 Rorug05G0153700 Rorug05G0153800 Rorug05G0154100
rosa_samantha	Rh2AG555300 Rh2BG568500 Rh2CG539200 Rh2DG578100 Rh3CG359800 Rh3DG363000 Rh5AG247800 Rh5BG248400 Rh5CG279700 Rh5CG492000 Rh5DG256700 Rh6CG191300
rosa_wichuraiana	Rw0G008460 Rw2G045940 Rw3G028650 Rw5G022720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	332
Acc36I	ACCTGC	1 cut(s)	332
AciI	CCGC	2 cut(s)	116, 407
AclWI	GGATC	2 cut(s)	482, 593
AcoI	YGGCCR	2 cut(s)	157, 643
AcsI	RAATTY	2 cut(s)	22, 60
AfaI	GTAC	3 cut(s)	75, 114, 423
AfiI	CCNNNNNNNGG	1 cut(s)	587
AflIII	ACRYGT	1 cut(s)	100
AgsI	TTSAA	4 cut(s)	49, 275, 317, 660
AhlI	ACTAGT	1 cut(s)	76
AjnI	CCWGG	1 cut(s)	478
AjuI	GAANNNNNNNTTGG	4 cut(s)	346, 378, 494, 526
AluBI	AGCT	3 cut(s)	163, 552, 667
AluI	AGCT	3 cut(s)	163, 552, 667
Alw26I	GTCTC	1 cut(s)	655
AlwI	GGATC	2 cut(s)	482, 593
AoxI	GGCC	2 cut(s)	157, 643
ApoI	RAATTY	2 cut(s)	22, 60
Asp700I	GAANNNNTTC	1 cut(s)	53
AspLEI	GCGC	2 cut(s)	288, 610
AspS9I	GGNCC	2 cut(s)	514, 590
AsuHPI	GGTGA	1 cut(s)	359
AvaII	GGWCC	2 cut(s)	514, 590
BalI	TGGCCA	1 cut(s)	159
BccI	CCATC	2 cut(s)	344, 456
BceAI	ACGGC	1 cut(s)	630
BciT130I	CCWGG	1 cut(s)	480
BciVI	GTATCC	1 cut(s)	570
BcoDI	GTCTC	1 cut(s)	655
BcuI	ACTAGT	1 cut(s)	76
BfaI	CTAG	1 cut(s)	77
BfuAI	ACCTGC	1 cut(s)	332
BfuI	GTATCC	1 cut(s)	570
BisI	GCNGC	1 cut(s)	407
BlpI	GCTNAGC	1 cut(s)	251
BlsI	GCNGC	1 cut(s)	408
Bme1390I	CCNGG	1 cut(s)	480
Bme18I	GGWCC	2 cut(s)	514, 590
BmgT120I	GGNCC	2 cut(s)	514, 590
BmiI	GGNNCC	1 cut(s)	237
BmrFI	CCNGG	1 cut(s)	480
BmrI	ACTGGG	1 cut(s)	437
BmuI	ACTGGG	1 cut(s)	437
Bpu1102I	GCTNAGC	1 cut(s)	251
BpuEI	CTTGAG	1 cut(s)	266
BsaJI	CCNNGG	2 cut(s)	479, 531
BsaWI	WCCGGW	1 cut(s)	124
BsaXI	ACNNNNNCTCC	2 cut(s)	285, 315
Bsc4I	CCNNNNNNNGG	1 cut(s)	587
Bse1I	ACTGG	2 cut(s)	432, 439
Bse3DI	GCAATG	2 cut(s)	295, 603
BseBI	CCWGG	1 cut(s)	480
BseDI	CCNNGG	2 cut(s)	479, 531
BseGI	GGATG	2 cut(s)	467, 576
BseLI	CCNNNNNNNGG	1 cut(s)	587
BseMI	GCAATG	2 cut(s)	295, 603
BseMII	CTCAG	2 cut(s)	242, 403
BseNI	ACTGG	2 cut(s)	432, 439
BshFI	GGCC	2 cut(s)	159, 645
BsiSI	CCGG	1 cut(s)	125
BslFI	GGGAC	1 cut(s)	496
BslI	CCNNNNNNNGG	1 cut(s)	587
BsmAI	GTCTC	1 cut(s)	655
BsmFI	GGGAC	1 cut(s)	496
BsnI	GGCC	2 cut(s)	159, 645
Bsp143I	GATC	3 cut(s)	385, 487, 598
Bsp1720I	GCTNAGC	1 cut(s)	251
BspACI	CCGC	2 cut(s)	116, 407
BspANI	GGCC	2 cut(s)	159, 645
BspCNI	CTCAG	2 cut(s)	243, 402
BspHI	TCATGA	1 cut(s)	564
BspLI	GGNNCC	1 cut(s)	237
BspMI	ACCTGC	1 cut(s)	332
BspPI	GGATC	2 cut(s)	482, 593
BsrDI	GCAATG	2 cut(s)	295, 603
BsrI	ACTGG	2 cut(s)	432, 439
BssECI	CCNNGG	2 cut(s)	479, 531
BssMI	GATC	3 cut(s)	385, 487, 598
BssT1I	CCWWGG	1 cut(s)	531
Bst2UI	CCWGG	1 cut(s)	480
Bst4CI	ACNGT	2 cut(s)	191, 421
BstC8I	GCNNGC	3 cut(s)	161, 554, 636
BstDEI	CTNAG	3 cut(s)	66, 251, 389
BstF5I	GGATG	2 cut(s)	467, 576
BstHHI	GCGC	2 cut(s)	288, 610
BstKTI	GATC	3 cut(s)	388, 490, 601
BstMAI	GTCTC	1 cut(s)	655
BstMBI	GATC	3 cut(s)	385, 487, 598
BstNI	CCWGG	1 cut(s)	480
BstNSI	RCATGY	2 cut(s)	104, 638
BstSCI	CCNGG	1 cut(s)	478
BstX2I	RGATCY	1 cut(s)	487
BstXI	CCANNNNNNTGG	1 cut(s)	167
BstYI	RGATCY	1 cut(s)	487
BsuI	GTATCC	1 cut(s)	570
BsuRI	GGCC	2 cut(s)	159, 645
BtsCI	GGATG	2 cut(s)	467, 576
BtsI	GCAGTG	1 cut(s)	125
BtsIMutI	CAGTG	3 cut(s)	125, 417, 425
BveI	ACCTGC	1 cut(s)	332
Cac8I	GCNNGC	3 cut(s)	161, 554, 636
CciI	TCATGA	1 cut(s)	564
CfoI	GCGC	2 cut(s)	288, 610
Cfr13I	GGNCC	2 cut(s)	514, 590
Csp6I	GTAC	3 cut(s)	74, 113, 422
CspCI	CAANNNNNGTGG	4 cut(s)	136, 171, 612, 647
CviAII	CATG	3 cut(s)	101, 565, 635
CviQI	GTAC	3 cut(s)	74, 113, 422
DdeI	CTNAG	3 cut(s)	66, 251, 389
DpnI	GATC	3 cut(s)	387, 489, 600
DpnII	GATC	3 cut(s)	385, 487, 598
EaeI	YGGCCR	2 cut(s)	157, 643
Eco130I	CCWWGG	1 cut(s)	531
Eco47I	GGWCC	2 cut(s)	514, 590
EcoRI	GAATTC	1 cut(s)	60
EcoRII	CCWGG	1 cut(s)	478
EcoT14I	CCWWGG	1 cut(s)	531
EcoT22I	ATGCAT	1 cut(s)	640
ErhI	CCWWGG	1 cut(s)	531
FaeI	CATG	3 cut(s)	104, 568, 638
FaiI	YATR	9 cut(s)	14, 72, 102, 187, 219, 264, 566, 636, 698
FaqI	GGGAC	1 cut(s)	496
FatI	CATG	3 cut(s)	100, 564, 634
Fnu4HI	GCNGC	1 cut(s)	407
FokI	GGATG	2 cut(s)	474, 583
Fsp4HI	GCNGC	1 cut(s)	407
FspBI	CTAG	1 cut(s)	77
GlaI	GCGC	2 cut(s)	287, 609
GluI	GCNGC	1 cut(s)	407
HaeIII	GGCC	2 cut(s)	159, 645
HapII	CCGG	1 cut(s)	125
HhaI	GCGC	2 cut(s)	288, 610
Hin1II	CATG	3 cut(s)	104, 568, 638
Hin6I	GCGC	2 cut(s)	286, 608
HinP1I	GCGC	2 cut(s)	286, 608
HinfI	GANTC	7 cut(s)	86, 172, 268, 313, 330, 475, 656
HpaII	CCGG	1 cut(s)	125
HphI	GGTGA	1 cut(s)	359
Hpy166II	GTNNAC	1 cut(s)	98
Hpy188I	TCNGA	5 cut(s)	59, 385, 392, 655, 710
Hpy188III	TCNNGA	6 cut(s)	46, 239, 272, 317, 565, 614
Hpy8I	GTNNAC	1 cut(s)	98
HpyAV	CCTTC	3 cut(s)	43, 206, 581
HpyCH4III	ACNGT	2 cut(s)	191, 421
HpyCH4IV	ACGT	1 cut(s)	672
HpyCH4V	TGCA	4 cut(s)	341, 455, 634, 638
HpyF3I	CTNAG	3 cut(s)	66, 251, 389
HpySE526I	ACGT	1 cut(s)	672
Hsp92II	CATG	3 cut(s)	104, 568, 638
HspAI	GCGC	2 cut(s)	286, 608
Kzo9I	GATC	3 cut(s)	385, 487, 598
LmnI	GCTCC	1 cut(s)	241
MaeI	CTAG	1 cut(s)	77
MaeII	ACGT	1 cut(s)	672
MaeIII	GTNAC	1 cut(s)	181
MalI	GATC	3 cut(s)	387, 489, 600
MboI	GATC	3 cut(s)	385, 487, 598
MboII	GAAGA	4 cut(s)	167, 437, 481, 484
MflI	RGATCY	1 cut(s)	487
MlsI	TGGCCA	1 cut(s)	159
MluCI	AATT	3 cut(s)	22, 60, 678
MluNI	TGGCCA	1 cut(s)	159
MnlI	CCTC	6 cut(s)	31, 226, 501, 561, 567, 621
Mox20I	TGGCCA	1 cut(s)	159
Mph1103I	ATGCAT	1 cut(s)	640
MroXI	GAANNNNTTC	1 cut(s)	53
MscI	TGGCCA	1 cut(s)	159
MslI	CAYNNNNRTG	3 cut(s)	460, 563, 569
Msp20I	TGGCCA	1 cut(s)	159
MspA1I	CMGCKG	1 cut(s)	552
MspI	CCGG	1 cut(s)	125
MspR9I	CCNGG	1 cut(s)	480
MvaI	CCWGG	1 cut(s)	480
NdeII	GATC	3 cut(s)	385, 487, 598
NlaIII	CATG	3 cut(s)	104, 568, 638
NlaIV	GGNNCC	1 cut(s)	237
NsiI	ATGCAT	1 cut(s)	640
NspI	RCATGY	2 cut(s)	104, 638
PaeI	GCATGC	1 cut(s)	638
PagI	TCATGA	1 cut(s)	564
PaqCI	CACCTGC	1 cut(s)	332
PciI	ACATGT	1 cut(s)	100
PdmI	GAANNNNTTC	1 cut(s)	53
PfeI	GAWTC	7 cut(s)	86, 172, 268, 313, 330, 475, 656
PkrI	GCNGC	1 cut(s)	408
PscI	ACATGT	1 cut(s)	100
Psp6I	CCWGG	1 cut(s)	478
PspGI	CCWGG	1 cut(s)	478
PspN4I	GGNNCC	1 cut(s)	237
PspPI	GGNCC	2 cut(s)	514, 590
PsuI	RGATCY	1 cut(s)	487
PvuII	CAGCTG	1 cut(s)	552
RsaI	GTAC	3 cut(s)	75, 114, 423
RsaNI	GTAC	3 cut(s)	74, 113, 422
RseI	CAYNNNNRTG	3 cut(s)	460, 563, 569
SatI	GCNGC	1 cut(s)	407
Sau3AI	GATC	3 cut(s)	385, 487, 598
Sau96I	GGNCC	2 cut(s)	514, 590
ScrFI	CCNGG	1 cut(s)	480
SetI	ASST	9 cut(s)	165, 216, 249, 346, 554, 592, 621, 669, 675
SinI	GGWCC	2 cut(s)	514, 590
SmiMI	CAYNNNNRTG	3 cut(s)	460, 563, 569
SmlI	CTYRAG	1 cut(s)	281
SmoI	CTYRAG	1 cut(s)	281
SpeI	ACTAGT	1 cut(s)	76
SphI	GCATGC	1 cut(s)	638
Sse9I	AATT	3 cut(s)	22, 60, 678
SsiI	CCGC	2 cut(s)	116, 407
SspMI	CTAG	1 cut(s)	77
StyD4I	CCNGG	1 cut(s)	478
StyI	CCWWGG	1 cut(s)	531
TaaI	ACNGT	2 cut(s)	191, 421
TaiI	ACGT	1 cut(s)	675
TasI	AATT	3 cut(s)	22, 60, 678
TatI	WGTACW	1 cut(s)	73
TauI	GCSGC	1 cut(s)	409
TfiI	GAWTC	7 cut(s)	86, 172, 268, 313, 330, 475, 656
TscAI	CASTG	3 cut(s)	125, 424, 432
TspDTI	ATGAA	2 cut(s)	312, 554
TspGWI	ACGGA	2 cut(s)	487, 582
TspRI	CASTG	3 cut(s)	125, 424, 432
VpaK11BI	GGWCC	2 cut(s)	514, 590
XapI	RAATTY	2 cut(s)	22, 60
XceI	RCATGY	2 cut(s)	104, 638
XcmI	CCANNNNNNNNNTGG	1 cut(s)	424
XmnI	GAANNNNTTC	1 cut(s)	53
XspI	CTAG	1 cut(s)	77
Zsp2I	ATGCAT	1 cut(s)	640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.