Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001034

Physical Location & Seq

Genomic Coordinates Reverse (-)

7026596 .. 7028844

Gene Structure 2249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1085600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 753 bp

ATGGGAATGGATGCTCAAGTATCATATGCGTTTCATACTGAGCGAAAGCTGCATCCCGAAAAGTTCAAAAATCAGTTAACCAATCAGGCTACTTATGCAAAGATTACCCATTCACAAGGCTGGTTTTCTTCTTCTCCTTCTCAATCTACTTCACGGAACATAGCGGAGTTCGCAAAGGTGAAGATCATGAAAAACCATGGCCAATGGGAAGATCTCCAAATTCCTCCAAATATCAAGTCAATTGTGATCCTCAATTTGCCTAGCTTTTCTGGTGGATTTAATCCTTGGGGAGTCCCGGCTAGGAGGCATAATGGACGTTTTACTCCAGCTTATGTAGACGATGGTCTTGTTGAAGTTGTTGGATTTCGAGATGCATGGCATGGGCTTGTTTTGCTTGCGCCGAAGGGACATGGGACTCGTCTTGCCCAGGCCCACCGTATTCGCTTTGAGTTTCACAAGGGTGCAATTGATCATACGTACATGAGGATCGACGGGGAACCCTGGAAGCAACCCCTCCCAGTTGATGATGAAACTATCATGGTTGAAATATCTCACCTTCACCAGGTGAACATTCTTGCTCGACATGGCTGCAGGTCTAAAAGCGTTCACAATCCTGAGTCACACAGCAGCGAGGGAAATGAGGAAGAGGATTGGGATGATGAAGAAACTCGTGAATCGGCAGAGTATAAGAAGTTTGGTGCAGCAGACACATTTAAGCTCCCGGAAGAGATTGATGTTTCGCATCTCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001775 GO:0003674 GO:0003824 GO:0004143 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005886 GO:0006629 GO:0006793 GO:0006796 GO:0006950 GO:0007596 GO:0007599 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009611 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0030168 GO:0030258 GO:0030425 GO:0031974 GO:0031981 GO:0032501 GO:0032991 GO:0036477 GO:0042060 GO:0042995 GO:0043005 GO:0043197 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044255 GO:0044309 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044456 GO:0044463 GO:0044464 GO:0045202 GO:0046834 GO:0050817 GO:0050878 GO:0050896 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071944 GO:0097447 GO:0097458 GO:0098794 GO:0120025 GO:0120038

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 ko04070 ko04072 ko05231 map00561 map00564 map01100 map01110 map04070 map04072 map05231

Pfam Domains

Protein Families

DAGK_acc DAGK_cat

Protein Analysis

251

Amino Acids

28.41

Weight (kDa)

6.23

Isoelectric Point (pI)

50.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGK_acc	PF00609	1 - 167	1.9e-33	Diacylglycerol kinase accessory domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001034)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20900 AT2G20900 AT2G20900 AT2G20900
fragaria_vesca	FvH4_3g21140 FvH4_3g21140 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410 FvH4_6g44410
malus_domestica	MD09G1097300.v1.1 MD11G1235100.v1.1 MD17G1085600.v1.1 MD17G1085700.v1.1
prunus_persica	Prupe.3G228600_v2.0.a1 Prupe.3G228600_v2.0.a1 Prupe.4G191900_v2.0.a1 Prupe.4G191900_v2.0.a1 Prupe.4G191900_v2.0.a1
pyrus_communis	pycom09g02160 pycom11g20670 pycom17g08330
rosa_chinensis	RchiOBHm_Chr2g0161401 RchiOBHm_Chr5g0036201
rosa_laevigata	RLG00000008429 RLG00000020681 RLG00000021281 RLG00000022547 RLG00000033679
rosa_multiflora	Rmu_co8358135.1_g000001 Rmu_sc0000247.1_g000005 Rmu_sc0003548.1_g000003 Rmu_sc0040460.1_g000002
rosa_roxburghii	Rroxscaffold_1G00044560 Rroxscaffold_2G00088870
rosa_rugosa	Rorug02G0489000 Rorug02G0489100 Rorug05G0153500 Rorug05G0153600.1 Rorug05G0153700 Rorug05G0153800 Rorug05G0154100
rosa_samantha	Rh2AG555300 Rh2BG568500 Rh2CG539200 Rh2DG578100 Rh3CG359800 Rh3DG363000 Rh5AG247800 Rh5BG248400 Rh5CG279700 Rh5CG492000 Rh5DG256700 Rh6CG191300
rosa_wichuraiana	Rw0G008460 Rw2G045940 Rw3G028650 Rw5G022720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	582
AccI	GTMKAC	1 cut(s)	336
AciI	CCGC	1 cut(s)	164
AclWI	GGATC	2 cut(s)	241, 494
AcoI	YGGCCR	1 cut(s)	199
AcsI	RAATTY	1 cut(s)	219
AdeI	CACNNNGTG	1 cut(s)	565
AfaI	GTAC	1 cut(s)	479
AfiI	CCNNNNNNNGG	1 cut(s)	562
AgsI	TTSAA	3 cut(s)	67, 353, 545
AjnI	CCWGG	3 cut(s)	426, 500, 561
AleI	CACNNNNGTG	1 cut(s)	459
AluBI	AGCT	4 cut(s)	49, 264, 329, 718
AluI	AGCT	4 cut(s)	49, 264, 329, 718
AlwI	GGATC	2 cut(s)	241, 494
AoxI	GGCC	2 cut(s)	199, 429
ApeKI	GCWGC	4 cut(s)	49, 588, 627, 701
ApoI	RAATTY	1 cut(s)	219
ArsI	GACNNNNNNTTYG	2 cut(s)	221, 253
AspLEI	GCGC	1 cut(s)	400
AspS9I	GGNCC	1 cut(s)	430
AsuC2I	CCSGG	2 cut(s)	296, 722
AsuHPI	GGTGA	4 cut(s)	190, 545, 551, 577
BalI	TGGCCA	1 cut(s)	201
BauI	CACGAG	1 cut(s)	669
BbvI	GCAGC	4 cut(s)	36, 575, 639, 713
BccI	CCATC	1 cut(s)	335
BcgI	CGANNNNNNTGC	2 cut(s)	570, 604
BciT130I	CCWGG	3 cut(s)	428, 502, 563
BclI	TGATCA	1 cut(s)	469
BcnI	CCSGG	2 cut(s)	296, 722
BfaI	CTAG	2 cut(s)	261, 300
BfmI	CTRYAG	1 cut(s)	589
BfuAI	ACCTGC	1 cut(s)	582
BglII	AGATCT	1 cut(s)	211
BisI	GCNGC	4 cut(s)	50, 589, 628, 702
BlsI	GCNGC	4 cut(s)	51, 590, 629, 703
Bme1390I	CCNGG	5 cut(s)	296, 428, 502, 563, 722
BmgT120I	GGNCC	1 cut(s)	430
BmiI	GGNNCC	1 cut(s)	498
BmrFI	CCNGG	5 cut(s)	296, 428, 502, 563, 722
BmrI	ACTGGG	1 cut(s)	512
BmsI	GCATC	2 cut(s)	61, 361
BmuI	ACTGGG	1 cut(s)	512
BoxI	GACNNNNGTC	1 cut(s)	342
BpmI	CTGGAG	1 cut(s)	309
BpuMI	CCSGG	2 cut(s)	296, 722
BsaAI	YACGTR	1 cut(s)	477
BsaJI	CCNNGG	4 cut(s)	196, 284, 426, 500
Bsc4I	CCNNNNNNNGG	1 cut(s)	562
Bse1I	ACTGG	1 cut(s)	518
BseBI	CCWGG	3 cut(s)	428, 502, 563
BseDI	CCNNGG	4 cut(s)	196, 284, 426, 500
BseGI	GGATG	3 cut(s)	16, 52, 661
BseLI	CCNNNNNNNGG	1 cut(s)	562
BseMII	CTCAG	2 cut(s)	30, 606
BseNI	ACTGG	1 cut(s)	518
BseXI	GCAGC	4 cut(s)	36, 575, 639, 713
BsgI	GTGCAG	1 cut(s)	720
BshFI	GGCC	2 cut(s)	201, 431
BsiSI	CCGG	2 cut(s)	296, 722
BslFI	GGGAC	3 cut(s)	278, 420, 427
BslI	CCNNNNNNNGG	1 cut(s)	562
BsmFI	GGGAC	3 cut(s)	278, 420, 427
BsnI	GGCC	2 cut(s)	201, 431
Bsp143I	GATC	5 cut(s)	183, 211, 246, 469, 486
Bsp19I	CCATGG	1 cut(s)	196
BspACI	CCGC	1 cut(s)	164
BspANI	GGCC	2 cut(s)	201, 431
BspCNI	CTCAG	2 cut(s)	31, 607
BspHI	TCATGA	1 cut(s)	186
BspLI	GGNNCC	1 cut(s)	498
BspMAI	CTGCAG	1 cut(s)	593
BspMI	ACCTGC	1 cut(s)	582
BspPI	GGATC	2 cut(s)	241, 494
BsrI	ACTGG	1 cut(s)	518
BssECI	CCNNGG	4 cut(s)	196, 284, 426, 500
BssMI	GATC	5 cut(s)	183, 211, 246, 469, 486
BssSI	CACGAG	1 cut(s)	669
BssT1I	CCWWGG	2 cut(s)	196, 284
Bst2BI	CACGAG	1 cut(s)	669
Bst2UI	CCWGG	3 cut(s)	428, 502, 563
Bst4CI	ACNGT	1 cut(s)	437
Bst6I	CTCTTC	2 cut(s)	639, 720
BstBAI	YACGTR	1 cut(s)	477
BstC8I	GCNNGC	1 cut(s)	396
BstDEI	CTNAG	3 cut(s)	39, 615, 746
BstDSI	CCRYGG	1 cut(s)	196
BstENI	CCTNNNNNAGG	1 cut(s)	560
BstF5I	GGATG	3 cut(s)	16, 52, 661
BstHHI	GCGC	1 cut(s)	400
BstKTI	GATC	5 cut(s)	186, 214, 249, 472, 489
BstMBI	GATC	5 cut(s)	183, 211, 246, 469, 486
BstMWI	GCNNNNNNNGC	4 cut(s)	49, 95, 170, 391
BstNI	CCWGG	3 cut(s)	428, 502, 563
BstPAI	GACNNNNGTC	1 cut(s)	342
BstSCI	CCNGG	5 cut(s)	294, 426, 500, 561, 720
BstSFI	CTRYAG	1 cut(s)	589
BstSNI	TACGTA	1 cut(s)	477
BstV1I	GCAGC	4 cut(s)	36, 575, 639, 713
BstX2I	RGATCY	1 cut(s)	211
BstYI	RGATCY	1 cut(s)	211
BsuRI	GGCC	2 cut(s)	201, 431
BtgI	CCRYGG	1 cut(s)	196
BtsCI	GGATG	3 cut(s)	16, 52, 661
BveI	ACCTGC	1 cut(s)	582
Cac8I	GCNNGC	1 cut(s)	396
CciI	TCATGA	1 cut(s)	186
CfoI	GCGC	1 cut(s)	400
Cfr13I	GGNCC	1 cut(s)	430
CsiI	ACCWGGT	1 cut(s)	561
Csp6I	GTAC	1 cut(s)	478
CviAII	CATG	8 cut(s)	187, 197, 375, 380, 410, 481, 538, 584
CviQI	GTAC	1 cut(s)	478
DdeI	CTNAG	3 cut(s)	39, 615, 746
DpnI	GATC	5 cut(s)	185, 213, 248, 471, 488
DpnII	GATC	5 cut(s)	183, 211, 246, 469, 486
DraIII	CACNNNGTG	1 cut(s)	565
EaeI	YGGCCR	1 cut(s)	199
Eam1104I	CTCTTC	2 cut(s)	639, 720
EarI	CTCTTC	2 cut(s)	639, 720
Eco105I	TACGTA	1 cut(s)	477
Eco130I	CCWWGG	2 cut(s)	196, 284
EcoNI	CCTNNNNNAGG	1 cut(s)	560
EcoRII	CCWGG	3 cut(s)	426, 500, 561
EcoT14I	CCWWGG	2 cut(s)	196, 284
EcoT22I	ATGCAT	1 cut(s)	376
ErhI	CCWWGG	2 cut(s)	196, 284
FaeI	CATG	8 cut(s)	190, 200, 378, 383, 413, 484, 541, 587
FaqI	GGGAC	3 cut(s)	278, 420, 427
FatI	CATG	8 cut(s)	186, 196, 374, 379, 409, 480, 537, 583
FauNDI	CATATG	1 cut(s)	25
FbaI	TGATCA	1 cut(s)	469
FblI	GTMKAC	1 cut(s)	336
Fnu4HI	GCNGC	4 cut(s)	50, 589, 628, 702
FokI	GGATG	3 cut(s)	23, 39, 668
Fsp4HI	GCNGC	4 cut(s)	50, 589, 628, 702
FspBI	CTAG	2 cut(s)	261, 300
GlaI	GCGC	1 cut(s)	399
GluI	GCNGC	4 cut(s)	50, 589, 628, 702
GsuI	CTGGAG	1 cut(s)	309
HaeIII	GGCC	2 cut(s)	201, 431
HapII	CCGG	2 cut(s)	296, 722
HhaI	GCGC	1 cut(s)	400
Hin1II	CATG	8 cut(s)	190, 200, 378, 383, 413, 484, 541, 587
Hin6I	GCGC	1 cut(s)	398
HinP1I	GCGC	1 cut(s)	398
HincII	GTYRAC	1 cut(s)	78
HindII	GTYRAC	1 cut(s)	78
HinfI	GANTC	4 cut(s)	291, 415, 617, 674
HpaI	GTTAAC	1 cut(s)	78
HpaII	CCGG	2 cut(s)	296, 722
HphI	GGTGA	4 cut(s)	190, 545, 551, 577
Hpy166II	GTNNAC	4 cut(s)	78, 337, 568, 607
Hpy188III	TCNNGA	5 cut(s)	56, 187, 368, 614, 671
Hpy8I	GTNNAC	4 cut(s)	78, 337, 568, 607
Hpy99I	CGWCG	1 cut(s)	494
HpyAV	CCTTC	3 cut(s)	147, 397, 566
HpyCH4III	ACNGT	1 cut(s)	437
HpyCH4IV	ACGT	2 cut(s)	316, 476
HpyCH4V	TGCA	6 cut(s)	52, 98, 374, 464, 591, 701
HpyF10VI	GCNNNNNNNGC	4 cut(s)	49, 95, 170, 391
HpyF3I	CTNAG	3 cut(s)	39, 615, 746
HpySE526I	ACGT	2 cut(s)	316, 476
Hsp92II	CATG	8 cut(s)	190, 200, 378, 383, 413, 484, 541, 587
HspAI	GCGC	1 cut(s)	398
Ksp22I	TGATCA	1 cut(s)	469
KspAI	GTTAAC	1 cut(s)	78
Kzo9I	GATC	5 cut(s)	183, 211, 246, 469, 486
LmnI	GCTCC	1 cut(s)	723
Lsp1109I	GCAGC	4 cut(s)	36, 575, 639, 713
LweI	GCATC	2 cut(s)	61, 361
MabI	ACCWGGT	1 cut(s)	561
MaeI	CTAG	2 cut(s)	261, 300
MaeII	ACGT	2 cut(s)	316, 476
MaeIII	GTNAC	1 cut(s)	618
MalI	GATC	5 cut(s)	185, 213, 248, 471, 488
MboI	GATC	5 cut(s)	183, 211, 246, 469, 486
MboII	GAAGA	7 cut(s)	120, 123, 193, 221, 656, 674, 737
MfeI	CAATTG	2 cut(s)	240, 465
MflI	RGATCY	1 cut(s)	211
MlsI	TGGCCA	1 cut(s)	201
MluCI	AATT	4 cut(s)	219, 240, 253, 465
MluNI	TGGCCA	1 cut(s)	201
MlyI	GAGTC	3 cut(s)	300, 409, 626
MmeI	TCCRAC	1 cut(s)	340
MnlI	CCTC	8 cut(s)	234, 260, 297, 477, 524, 625, 634, 640
Mox20I	TGGCCA	1 cut(s)	201
Mph1103I	ATGCAT	1 cut(s)	376
MscI	TGGCCA	1 cut(s)	201
MseI	TTAA	4 cut(s)	77, 279, 714, 751
MslI	CAYNNNNRTG	1 cut(s)	459
Msp20I	TGGCCA	1 cut(s)	201
MspI	CCGG	2 cut(s)	296, 722
MspR9I	CCNGG	5 cut(s)	296, 428, 502, 563, 722
MunI	CAATTG	2 cut(s)	240, 465
MvaI	CCWGG	3 cut(s)	428, 502, 563
MwoI	GCNNNNNNNGC	4 cut(s)	49, 95, 170, 391
NciI	CCSGG	2 cut(s)	296, 722
NcoI	CCATGG	1 cut(s)	196
NdeI	CATATG	1 cut(s)	25
NdeII	GATC	5 cut(s)	183, 211, 246, 469, 486
NlaIII	CATG	8 cut(s)	190, 200, 378, 383, 413, 484, 541, 587
NlaIV	GGNNCC	1 cut(s)	498
NmuCI	GTSAC	1 cut(s)	618
NsiI	ATGCAT	1 cut(s)	376
OliI	CACNNNNGTG	1 cut(s)	459
PagI	TCATGA	1 cut(s)	186
PfeI	GAWTC	1 cut(s)	674
PfoI	TCCNGGA	1 cut(s)	720
PkrI	GCNGC	4 cut(s)	51, 590, 629, 703
PleI	GAGTC	3 cut(s)	299, 409, 625
PpsI	GAGTC	3 cut(s)	299, 409, 625
Ppu21I	YACGTR	1 cut(s)	477
PshAI	GACNNNNGTC	1 cut(s)	342
Psp6I	CCWGG	3 cut(s)	426, 500, 561
PspGI	CCWGG	3 cut(s)	426, 500, 561
PspN4I	GGNNCC	1 cut(s)	498
PspPI	GGNCC	1 cut(s)	430
PstI	CTGCAG	1 cut(s)	593
PsuI	RGATCY	1 cut(s)	211
RsaI	GTAC	1 cut(s)	479
RsaNI	GTAC	1 cut(s)	478
RseI	CAYNNNNRTG	1 cut(s)	459
SaqAI	TTAA	4 cut(s)	77, 279, 714, 751
SatI	GCNGC	4 cut(s)	50, 589, 628, 702
Sau3AI	GATC	5 cut(s)	183, 211, 246, 469, 486
Sau96I	GGNCC	1 cut(s)	430
SchI	GAGTC	3 cut(s)	300, 409, 626
ScrFI	CCNGG	5 cut(s)	296, 428, 502, 563, 722
SexAI	ACCWGGT	1 cut(s)	561
SfaNI	GCATC	2 cut(s)	61, 361
SfcI	CTRYAG	1 cut(s)	589
SmiMI	CAYNNNNRTG	1 cut(s)	459
SmlI	CTYRAG	1 cut(s)	15
SmoI	CTYRAG	1 cut(s)	15
SnaBI	TACGTA	1 cut(s)	477
Sse9I	AATT	4 cut(s)	219, 240, 253, 465
SsiI	CCGC	1 cut(s)	164
SspMI	CTAG	2 cut(s)	261, 300
StyD4I	CCNGG	5 cut(s)	294, 426, 500, 561, 720
StyI	CCWWGG	2 cut(s)	196, 284
TaaI	ACNGT	1 cut(s)	437
TaiI	ACGT	2 cut(s)	319, 479
TaqI	TCGA	3 cut(s)	367, 489, 580
TasI	AATT	4 cut(s)	219, 240, 253, 465
TfiI	GAWTC	1 cut(s)	674
Tru1I	TTAA	4 cut(s)	77, 279, 714, 751
Tru9I	TTAA	4 cut(s)	77, 279, 714, 751
TseFI	GTSAC	1 cut(s)	618
TseI	GCWGC	4 cut(s)	49, 588, 627, 701
Tsp45I	GTSAC	1 cut(s)	618
TspDTI	ATGAA	4 cut(s)	23, 203, 543, 675
TspGWI	ACGGA	1 cut(s)	169
XagI	CCTNNNNNAGG	1 cut(s)	560
XapI	RAATTY	1 cut(s)	219
XmiI	GTMKAC	1 cut(s)	336
XspI	CTAG	2 cut(s)	261, 300
Zsp2I	ATGCAT	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.