MD11G1264000.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000926
Physical Location & Seq
Forward (+)
37901214 .. 37904955
3742 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1264000.v1.1.491

Sequence Viewer

Length: 2466 bp
ATGGATCCCTACTTCCAGCAGAGACTAAGAGATGAAGTCATCTACCTCCACTCTCTCTGGTACCAGGGTCCCCCTTCCTCCTCCTCTAATCCTAACCCTAGACTCCACCAACCCAATCCCTATCCCAATCGCAATCCCAATTTCAATCCCAATCCCAATCCCAATCCCAATCCCAATCCCAATCCGTATAACAGACCCAGACCCAGAAGAAATGTTACAAACCCCTCGCAACCCGACCCCCTTCCCCAATCGGGTCATCAAGGCCCCTCCTCCTCCTCCTCTAAGAGGAAGAGAAATAGAAATTCAAGGCACGAAAGAGAAAGACCGGCCAAGAAGAACCCCTCCCAACCCGACCCGCTTCCTCCGCATTCCGGGCCTCCTTGGCCCTGCCCCAGCCCCGCCCGTGACTCTGCCCCGGGCTCATCCACCCAGTGGCCTGCAATGCCCGCCAAGCCCAATTCGGCTGCGGTGGCCCAACCCCCTTCCCCTGAAGAACAAGCAAGGCTCGCTGCACTGAAACTGCAGCACGGCGCCCTAGACTTTTGCCGGGGGTTGTTTTCCGGCAATGATGGGTCGGACGGGGAGGAGTCCGAGGCGGAAGAGAGTGAAGATGGAGAGGACTACTGTGTTGAGAACGGCGAAACAGAGGAGTACAAGGTGCTGTTGAATTTGTTTGTTGAGAGGACTGAGCTGAGGAGGTACTATGAGGTGAATTATGAGAATGGGGAGTTCTGTTGCTTGGTGTGCGACGTGTTGGGAAAGAAGAAGAGGGTCAGGAGCTGTGTTGGGCTTGTTCAGCACTCGATTTCCATTACCAACACGAAGAAGAAGCGGGTTCATAGGGCTTTTGCACAGGTGGTGTGTAAGGTTTTGGGTTGGGATTTTGACAGGCTGCCGACGATTGTGCTCAAAGGCGAAAGGCTCGGTCTTTCGTTGGAGAACCAGGGCCAGGAACAAGGTGAGGCTGCCGTGAATGCTGGTTCATCTGAGGGAGTTTTGGTTTCTGTTGAAGACAATGTGGCACTTGAAAATGCTATGGAAGCTGAAATTGCTTTGGAAGACAATGTGGCATCCGAAAATGCTGTGGAAGACAATGTGGCACCCAAAGACGCTATGGAGGACGATGTAGCACCTGGAGACGCTATGGAAGACAATGTTGTAACTGAAAATGCTAGGGAAGATAATCTGGCAGCCAAAAATGCTGTGGAAGACAATCTGGTAACTAAAAATGCTATGGAAGACAATTTGCCAGCCGAAAAGGCTATGGAAATCGAAAATGCTGTGGAAAACAATGTGGTAGCAGAAAATGCCGTCGAAGGCAATGTGGCAACTGAAAATTCTGTTGAAGAGATAGTGACAGCTGAAAATGCTGACGAAGATATTTGGTTTGCTGAAGCCAATGCTTTGTGTAATGAAGTAATGGATTGCCAGAAATCTTTCGAAGGTGATTATACAAATGAAAGCACAGAAAGCATGGATAAAGGAATATCAGAAATGGAAGCAAACAAAGAAACAGTGGATACTTGGGGAACTGATCAAACACTGGTGTCAAAGAATGAATGGCCATGTAAAGAGTCCAGCATTTCCTCATCGACAGTGTTAGGTTGGCCGACCTGTACTTCTCCCCCAGCTTCTGCAACATGCTCTATTCCAGTGGAAGAACAAGCGAGGTCTGCTGAAGCGAGGATACAGCAGAAGGCCTTGAAAGAATGCCTGGATTTCTTTTCTGAGAAAGATGGCTCATACAGTGATGAAGACAACAGCGAAGATGACGAGGAGGGTGATTTGATGGATGAAGATGGGTGTGAGGAAAGTGAGCTAAAGTTCTTTTCAAGAATATTTACGGAGGATGGTGAGTTGAGGAGTTTTTATGAGAAAAATTACGAAGGTGGGGAATTTTGCTGTTTGGTTTGTTGCGCATTAATGAAGAAAGGGTGGAAGAGGTTTAAAGGTGGTGTTGCGCTTCTTCAGCACTGCAATGCAATATTAAAGACAAAGAAGAAGGCGGCTCATAGGGCTTATGGGCAGGTTATTTGTAAACTCCTTGGTTGGGATATTGGTCAGCCTCCAACCATTGGCTCCATGGATAAAACTCTTGGAGAACCTTTGTCAGAGTCAGACAATTTGCCGGGTGAAGTGGAGGAAAATGTTGACAATGACAAGGATAACATGGTTGTATCAAATGAAAATGTGGACTGCATGAGTGGTTATAATCGTGAAATGGTTTCAAATGAGGAATCTGATGTTGCTCACAGTAACGGAACATCACAGACACCCGAGATGCAGGGTGTGCCCGAGGAAAATGTGGTTGTTTCAAATGAAAACATGGACTCTATCAGTGGTTATAATGGTGAAACAGTTCCAAAAGAGGAATCTGATGGTGCTCATGGTGATGGAACATTTACGGTACCTGGGTTGCGGGTGAGTTTGAACTCAGTTGTTCACTCCTCAACAAAGTCAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

822

Amino Acids

90.25

Weight (kDa)

4.52

Isoelectric Point (pI)

46.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2211, 2346
Acc16I TGCGCA 1 cut(s) 1918
Acc36I ACCTGC 1 cut(s) 2017
Acc65I GGTACC 2 cut(s) 60, 2407
AccB1I GGYRCC 4 cut(s) 60, 530, 1099, 2407
AccB7I CCANNNNNTGG 2 cut(s) 432, 2075
AciI CCGC 9 cut(s) 356, 365, 399, 447, 467, 596, 832, 2006, 2419
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 3 cut(s) 327, 1562, 1607
AcsI RAATTY 4 cut(s) 301, 667, 1336, 1895
AcuI CTGAAG 4 cut(s) 510, 1413, 1698, 1952
AcyI GRCGYC 1 cut(s) 531
AdeI CACNNNGTG 1 cut(s) 432
AfaI GTAC 5 cut(s) 62, 653, 701, 1618, 2409
AfiI CCNNNNNNNGG 7 cut(s) 251, 285, 371, 432, 949, 2050, 2075
AflIII ACRYGT 1 cut(s) 750
AjiI CACGTC 1 cut(s) 751
AjnI CCWGG 6 cut(s) 63, 942, 948, 1132, 1713, 2410
AluBI AGCT 6 cut(s) 691, 780, 1043, 1361, 1631, 1819
AluI AGCT 6 cut(s) 691, 780, 1043, 1361, 1631, 1819
Alw21I GWGCWC 2 cut(s) 909, 2386
Alw26I GTCTC 2 cut(s) 16, 1131
AlwI GGATC 1 cut(s) 12
AlwNI CAGNNNCTG 2 cut(s) 780, 1634
Ama87I CYCGRG 3 cut(s) 415, 2276, 2294
ApeKI GCWGC 6 cut(s) 464, 509, 523, 892, 965, 1190
ApoI RAATTY 4 cut(s) 301, 667, 1336, 1895
AseI ATTAAT 1 cut(s) 1922
Asp700I GAANNNNTTC 2 cut(s) 1436, 2358
Asp718I GGTACC 2 cut(s) 60, 2407
AspLEI GCGC 3 cut(s) 533, 1919, 1963
AspS9I GGNCC 6 cut(s) 68, 263, 374, 384, 472, 946
AsuC2I CCSGG 5 cut(s) 373, 416, 417, 548, 2130
AsuHPI GGTGA 9 cut(s) 721, 971, 1457, 1793, 1865, 2144, 2363, 2402, 2434
AsuII TTCGAA 1 cut(s) 1440
AvaI CYCGRG 3 cut(s) 415, 2276, 2294
AvaII GGWCC 1 cut(s) 68
BaeGI GKGCMC 1 cut(s) 2295
BaeI ACNNNNGTAYC 4 cut(s) 52, 85, 2399, 2432
BalI TGGCCA 1 cut(s) 1564
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 4 cut(s) 60, 530, 1099, 2407
BanII GRGCYC 1 cut(s) 422
BarI GAAGNNNNNNTAC 4 cut(s) 199, 231, 1671, 1703
BbsI GAAGAC 7 cut(s) 1017, 1065, 1095, 1155, 1215, 1245, 1761
Bbv12I GWGCWC 2 cut(s) 909, 2386
BbvCI CCTCAGC 1 cut(s) 692
BbvI GCAGC 6 cut(s) 451, 496, 535, 879, 952, 1202
BccI CCATC 8 cut(s) 563, 605, 1730, 1783, 1793, 1844, 2372, 2387
BceAI ACGGC 4 cut(s) 544, 652, 953, 1295
BcgI CGANNNNNNTGC 2 cut(s) 886, 920
BciT130I CCWGG 6 cut(s) 65, 944, 950, 1134, 1715, 2412
BciVI GTATCC 2 cut(s) 1513, 1680
BclI TGATCA 1 cut(s) 1534
BcnI CCSGG 5 cut(s) 373, 416, 417, 548, 2130
BcoDI GTCTC 2 cut(s) 16, 1131
BfaI CTAG 3 cut(s) 99, 536, 1173
BfmI CTRYAG 1 cut(s) 521
BfoI RGCGCY 1 cut(s) 534
BfuAI ACCTGC 1 cut(s) 2017
BfuI GTATCC 2 cut(s) 1513, 1680
BglI GCCNNNNNGGC 2 cut(s) 382, 1259
BisI GCNGC 7 cut(s) 465, 510, 524, 893, 966, 1191, 2007
BlsI GCNGC 7 cut(s) 466, 511, 525, 894, 967, 1192, 2008
Bme18I GGWCC 1 cut(s) 68
BmeT110I CYCGRG 3 cut(s) 415, 2276, 2294
BmgBI CACGTC 1 cut(s) 751
BmgT120I GGNCC 6 cut(s) 68, 263, 374, 384, 472, 946
BmiI GGNNCC 9 cut(s) 6, 62, 69, 70, 265, 532, 1101, 2080, 2409
BmrI ACTGGG 1 cut(s) 424
BmsI GCATC 2 cut(s) 1079, 2271
BmuI ACTGGG 1 cut(s) 424
BpiI GAAGAC 7 cut(s) 1017, 1065, 1095, 1155, 1215, 1245, 1761
BpmI CTGGAG 1 cut(s) 1155
Bpu10I CCTNAGC 1 cut(s) 692
Bpu14I TTCGAA 1 cut(s) 1440
BpuMI CCSGG 5 cut(s) 373, 416, 417, 548, 2130
BsaHI GRCGYC 1 cut(s) 531
BsaXI ACNNNNNCTCC 2 cut(s) 984, 1014
Bsc4I CCNNNNNNNGG 7 cut(s) 251, 285, 371, 432, 949, 2050, 2075
Bse118I RCCGGY 1 cut(s) 325
Bse1I ACTGG 3 cut(s) 430, 1548, 1652
Bse3DI GCAATG 4 cut(s) 447, 571, 1327, 1984
BseBI CCWGG 6 cut(s) 65, 944, 950, 1134, 1715, 2412
BseGI GGATG 4 cut(s) 422, 1070, 1798, 1855
BseLI CCNNNNNNNGG 7 cut(s) 251, 285, 371, 432, 949, 2050, 2075
BseMI GCAATG 4 cut(s) 447, 571, 1327, 1984
BseMII CTCAG 5 cut(s) 678, 683, 978, 1719, 2448
BseNI ACTGG 3 cut(s) 430, 1548, 1652
BseSI GKGCMC 1 cut(s) 2295
BseXI GCAGC 6 cut(s) 451, 496, 535, 879, 952, 1202
BseYI CCCAGC 2 cut(s) 392, 1627
BsgI GTGCAG 1 cut(s) 495
BshNI GGYRCC 4 cut(s) 60, 530, 1099, 2407
BsiHKAI GWGCWC 2 cut(s) 909, 2386
BsiHKCI CYCGRG 3 cut(s) 415, 2276, 2294
BsiSI CCGG 6 cut(s) 326, 372, 416, 547, 561, 2129
BslFI GGGAC 1 cut(s) 54
BslI CCNNNNNNNGG 7 cut(s) 251, 285, 371, 432, 949, 2050, 2075
BsmAI GTCTC 2 cut(s) 16, 1131
BsmBI CGTCTC 1 cut(s) 1131
BsmFI GGGAC 1 cut(s) 54
BsmI GAATGC 3 cut(s) 367, 979, 1715
BsoBI CYCGRG 3 cut(s) 415, 2276, 2294
Bsp119I TTCGAA 1 cut(s) 1440
Bsp1286I GDGCHC 4 cut(s) 422, 909, 2295, 2386
Bsp143I GATC 2 cut(s) 4, 1534
Bsp19I CCATGG 1 cut(s) 2082
BspACI CCGC 9 cut(s) 356, 365, 399, 447, 467, 596, 832, 2006, 2419
BspCNI CTCAG 5 cut(s) 679, 684, 979, 1720, 2447
BspLI GGNNCC 9 cut(s) 6, 62, 69, 70, 265, 532, 1101, 2080, 2409
BspMAI CTGCAG 1 cut(s) 525
BspMI ACCTGC 1 cut(s) 2017
BspPI GGATC 1 cut(s) 12
BspT104I TTCGAA 1 cut(s) 1440
BspT107I GGYRCC 4 cut(s) 60, 530, 1099, 2407
BsrDI GCAATG 4 cut(s) 447, 571, 1327, 1984
BsrFI RCCGGY 1 cut(s) 325
BsrI ACTGG 3 cut(s) 430, 1548, 1652
BssAI RCCGGY 1 cut(s) 325
BssMI GATC 2 cut(s) 4, 1534
BssNI GRCGYC 1 cut(s) 531
BssT1I CCWWGG 3 cut(s) 380, 2044, 2082
Bst2UI CCWGG 6 cut(s) 65, 944, 950, 1134, 1715, 2412
Bst4CI ACNGT 7 cut(s) 626, 1516, 1597, 1748, 2255, 2359, 2407
Bst6I CTCTTC 5 cut(s) 284, 594, 761, 1341, 1934
BstACI GRCGYC 1 cut(s) 531
BstAPI GCANNNNNTGC 2 cut(s) 1307, 2290
BstBI TTCGAA 1 cut(s) 1440
BstC8I GCNNGC 4 cut(s) 438, 447, 507, 1251
BstDEI CTNAG 7 cut(s) 26, 282, 687, 692, 987, 1728, 2434
BstDSI CCRYGG 1 cut(s) 2082
BstENI CCTNNNNNAGG 1 cut(s) 283
BstF5I GGATG 4 cut(s) 422, 1070, 1798, 1855
BstH2I RGCGCY 1 cut(s) 534
BstHHI GCGC 3 cut(s) 533, 1919, 1963
BstKTI GATC 2 cut(s) 7, 1537
BstMAI GTCTC 2 cut(s) 16, 1131
BstMBI GATC 2 cut(s) 4, 1534
BstNI CCWGG 6 cut(s) 65, 944, 950, 1134, 1715, 2412
BstNSI RCATGY 1 cut(s) 1644
BstSFI CTRYAG 1 cut(s) 521
BstSLI GKGCMC 1 cut(s) 2295
BstV1I GCAGC 6 cut(s) 451, 496, 535, 879, 952, 1202
BstV2I GAAGAC 7 cut(s) 1017, 1065, 1095, 1155, 1215, 1245, 1761
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuI GTATCC 2 cut(s) 1513, 1680
BtgI CCRYGG 1 cut(s) 2082
BtrI CACGTC 1 cut(s) 751
BtsCI GGATG 4 cut(s) 422, 1070, 1798, 1855
BtsI GCAGTG 1 cut(s) 1972
BtsIMutI CAGTG 9 cut(s) 437, 512, 1521, 1541, 1602, 1659, 1753, 1972, 2344
BveI ACCTGC 1 cut(s) 2017
Cac8I GCNNGC 4 cut(s) 438, 447, 507, 1251
CaiI CAGNNNCTG 2 cut(s) 780, 1634
CfoI GCGC 3 cut(s) 533, 1919, 1963
Cfr10I RCCGGY 1 cut(s) 325
Cfr13I GGNCC 6 cut(s) 68, 263, 374, 384, 472, 946
Cfr9I CCCGGG 1 cut(s) 415
CseI GACGC 2 cut(s) 1118, 1148
Csp6I GTAC 5 cut(s) 61, 652, 700, 1617, 2408
CviAII CATG 8 cut(s) 1474, 1566, 1641, 2083, 2170, 2200, 2326, 2387
CviQI GTAC 5 cut(s) 61, 652, 700, 1617, 2408
DdeI CTNAG 7 cut(s) 26, 282, 687, 692, 987, 1728, 2434
DinI GGCGCC 1 cut(s) 532
DpnI GATC 2 cut(s) 6, 1536
DpnII GATC 2 cut(s) 4, 1534
DraI TTTAAA 1 cut(s) 1948
DraIII CACNNNGTG 1 cut(s) 432
EaeI YGGCCR 3 cut(s) 327, 1562, 1607
Eam1104I CTCTTC 5 cut(s) 284, 594, 761, 1341, 1934
EarI CTCTTC 5 cut(s) 284, 594, 761, 1341, 1934
EciI GGCGGA 1 cut(s) 611
Eco130I CCWWGG 3 cut(s) 380, 2044, 2082
Eco147I AGGCCT 1 cut(s) 1700
Eco24I GRGCYC 1 cut(s) 422
Eco47I GGWCC 1 cut(s) 68
Eco57I CTGAAG 4 cut(s) 510, 1413, 1698, 1952
Eco88I CYCGRG 3 cut(s) 415, 2276, 2294
EcoNI CCTNNNNNAGG 1 cut(s) 283
EcoO109I RGGNCCY 2 cut(s) 68, 263
EcoRII CCWGG 6 cut(s) 63, 942, 948, 1132, 1713, 2410
EcoT14I CCWWGG 3 cut(s) 380, 2044, 2082
EcoT38I GRGCYC 1 cut(s) 422
EgeI GGCGCC 1 cut(s) 532
EheI GGCGCC 1 cut(s) 532
ErhI CCWWGG 3 cut(s) 380, 2044, 2082
Esp3I CGTCTC 1 cut(s) 1131
FaeI CATG 8 cut(s) 1477, 1569, 1644, 2086, 2173, 2203, 2329, 2390
FaqI GGGAC 1 cut(s) 54
FatI CATG 8 cut(s) 1473, 1565, 1640, 2082, 2169, 2199, 2325, 2386
FauI CCCGC 5 cut(s) 363, 406, 454, 825, 2412
FbaI TGATCA 1 cut(s) 1534
Fnu4HI GCNGC 7 cut(s) 465, 510, 524, 893, 966, 1191, 2007
FokI GGATG 4 cut(s) 409, 1057, 1805, 1862
FriOI GRGCYC 1 cut(s) 422
Fsp4HI GCNGC 7 cut(s) 465, 510, 524, 893, 966, 1191, 2007
FspBI CTAG 3 cut(s) 99, 536, 1173
FspI TGCGCA 1 cut(s) 1918
GlaI GCGC 3 cut(s) 532, 1918, 1962
GluI GCNGC 7 cut(s) 465, 510, 524, 893, 966, 1191, 2007
GsaI CCCAGC 2 cut(s) 396, 1631
GsuI CTGGAG 1 cut(s) 1155
HaeII RGCGCY 1 cut(s) 534
HapII CCGG 6 cut(s) 326, 372, 416, 547, 561, 2129
HgaI GACGC 2 cut(s) 1118, 1148
HhaI GCGC 3 cut(s) 533, 1919, 1963
Hin1I GRCGYC 1 cut(s) 531
Hin1II CATG 8 cut(s) 1477, 1569, 1644, 2086, 2173, 2203, 2329, 2390
Hin6I GCGC 3 cut(s) 531, 1917, 1961
HinP1I GCGC 3 cut(s) 531, 1917, 1961
HincII GTYRAC 1 cut(s) 2152
HindII GTYRAC 1 cut(s) 2152
HinfI GANTC 8 cut(s) 102, 407, 587, 1574, 2114, 2237, 2330, 2372
HpaII CCGG 6 cut(s) 326, 372, 416, 547, 561, 2129
HphI GGTGA 9 cut(s) 721, 971, 1457, 1793, 1865, 2144, 2363, 2402, 2434
Hpy166II GTNNAC 4 cut(s) 2039, 2152, 2194, 2443
Hpy188III TCNNGA 3 cut(s) 775, 1833, 2216
Hpy8I GTNNAC 4 cut(s) 2039, 2152, 2194, 2443
Hpy99I CGWCG 3 cut(s) 752, 901, 1316
HpyAV CCTTC 8 cut(s) 84, 251, 492, 1310, 1436, 1690, 1880, 1996
HpyCH4III ACNGT 7 cut(s) 626, 1516, 1597, 1748, 2255, 2359, 2407
HpyCH4IV ACGT 1 cut(s) 750
HpyCH4V TGCA 9 cut(s) 440, 512, 523, 851, 1637, 1977, 1982, 2199, 2284
HpyF3I CTNAG 7 cut(s) 26, 282, 687, 692, 987, 1728, 2434
HpySE526I ACGT 1 cut(s) 750
Hsp92I GRCGYC 1 cut(s) 531
Hsp92II CATG 8 cut(s) 1477, 1569, 1644, 2086, 2173, 2203, 2329, 2390
HspAI GCGC 3 cut(s) 531, 1917, 1961
KasI GGCGCC 1 cut(s) 530
KflI GGGWCCC 1 cut(s) 68
KpnI GGTACC 2 cut(s) 64, 2411
Ksp22I TGATCA 1 cut(s) 1534
Kzo9I GATC 2 cut(s) 4, 1534
LmnI GCTCC 2 cut(s) 777, 2084
Lsp1109I GCAGC 6 cut(s) 451, 496, 535, 879, 952, 1202
LweI GCATC 2 cut(s) 1079, 2271
MaeI CTAG 3 cut(s) 99, 536, 1173
MaeII ACGT 1 cut(s) 750
MaeIII GTNAC 6 cut(s) 214, 404, 1159, 1219, 1354, 2255
MalI GATC 2 cut(s) 6, 1536
MboI GATC 2 cut(s) 4, 1534
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 4 cut(s) 422, 909, 2295, 2386
MlsI TGGCCA 1 cut(s) 1564
MluNI TGGCCA 1 cut(s) 1564
Mly113I GGCGCC 1 cut(s) 531
MlyI GAGTC 6 cut(s) 96, 401, 596, 1583, 2123, 2324
MmeI TCCRAC 3 cut(s) 555, 915, 2093
Mox20I TGGCCA 1 cut(s) 1564
MroXI GAANNNNTTC 2 cut(s) 1436, 2358
MscI TGGCCA 1 cut(s) 1564
MseI TTAA 3 cut(s) 1922, 1947, 1988
MslI CAYNNNNRTG 2 cut(s) 1977, 2391
Msp20I TGGCCA 1 cut(s) 1564
MspA1I CMGCKG 1 cut(s) 1361
MspI CCGG 6 cut(s) 326, 372, 416, 547, 561, 2129
Mva1269I GAATGC 3 cut(s) 367, 979, 1715
MvaI CCWGG 6 cut(s) 65, 944, 950, 1134, 1715, 2412
NarI GGCGCC 1 cut(s) 531
NciI CCSGG 5 cut(s) 373, 416, 417, 548, 2130
NcoI CCATGG 1 cut(s) 2082
NdeII GATC 2 cut(s) 4, 1534
NlaIII CATG 8 cut(s) 1477, 1569, 1644, 2086, 2173, 2203, 2329, 2390
NlaIV GGNNCC 9 cut(s) 6, 62, 69, 70, 265, 532, 1101, 2080, 2409
NmuCI GTSAC 2 cut(s) 404, 1354
NsbI TGCGCA 1 cut(s) 1918
NspI RCATGY 1 cut(s) 1644
NspV TTCGAA 1 cut(s) 1440
PceI AGGCCT 1 cut(s) 1700
PctI GAATGC 3 cut(s) 367, 979, 1715
PdmI GAANNNNTTC 2 cut(s) 1436, 2358
PfeI GAWTC 2 cut(s) 2237, 2372
PflMI CCANNNNNTGG 2 cut(s) 432, 2075
PkrI GCNGC 7 cut(s) 466, 511, 525, 894, 967, 1192, 2008
PleI GAGTC 6 cut(s) 96, 401, 595, 1582, 2122, 2324
PluTI GGCGCC 1 cut(s) 534
PpsI GAGTC 6 cut(s) 96, 401, 595, 1582, 2122, 2324
PpuMI RGGWCCY 1 cut(s) 68
PshBI ATTAAT 1 cut(s) 1922
PsiI TTATAA 2 cut(s) 2211, 2346
Psp5II RGGWCCY 1 cut(s) 68
Psp6I CCWGG 6 cut(s) 63, 942, 948, 1132, 1713, 2410
PspFI CCCAGC 2 cut(s) 392, 1627
PspGI CCWGG 6 cut(s) 63, 942, 948, 1132, 1713, 2410
PspN4I GGNNCC 9 cut(s) 6, 62, 69, 70, 265, 532, 1101, 2080, 2409
PspPI GGNCC 6 cut(s) 68, 263, 374, 384, 472, 946
PspPPI RGGWCCY 1 cut(s) 68
PstI CTGCAG 1 cut(s) 525
PstNI CAGNNNCTG 2 cut(s) 780, 1634
PsuI RGATCY 1 cut(s) 4
PvuII CAGCTG 1 cut(s) 1361
RsaI GTAC 5 cut(s) 62, 653, 701, 1618, 2409
RsaNI GTAC 5 cut(s) 61, 652, 700, 1617, 2408
RseI CAYNNNNRTG 2 cut(s) 1977, 2391
SaqAI TTAA 3 cut(s) 1922, 1947, 1988
SatI GCNGC 7 cut(s) 465, 510, 524, 893, 966, 1191, 2007
Sau3AI GATC 2 cut(s) 4, 1534
Sau96I GGNCC 6 cut(s) 68, 263, 374, 384, 472, 946
SchI GAGTC 6 cut(s) 96, 401, 596, 1583, 2123, 2324
SduI GDGCHC 4 cut(s) 422, 909, 2295, 2386
SfaNI GCATC 2 cut(s) 1079, 2271
SfcI CTRYAG 1 cut(s) 521
SfiI GGCCNNNNNGGCC 1 cut(s) 382
SfoI GGCGCC 1 cut(s) 532
SfuI TTCGAA 1 cut(s) 1440
SinI GGWCC 1 cut(s) 68
SmaI CCCGGG 1 cut(s) 417
SmiMI CAYNNNNRTG 2 cut(s) 1977, 2391
SseBI AGGCCT 1 cut(s) 1700
SsiI CCGC 9 cut(s) 356, 365, 399, 447, 467, 596, 832, 2006, 2419
SspDI GGCGCC 1 cut(s) 530
SspI AATATT 2 cut(s) 1839, 1986
SspMI CTAG 3 cut(s) 99, 536, 1173
StuI AGGCCT 1 cut(s) 1700
StyI CCWWGG 3 cut(s) 380, 2044, 2082
TaaI ACNGT 7 cut(s) 626, 1516, 1597, 1748, 2255, 2359, 2407
TaiI ACGT 1 cut(s) 753
TaqI TCGA 5 cut(s) 803, 1272, 1314, 1440, 1592
TaqII GACCGA 1 cut(s) 914
TatI WGTACW 2 cut(s) 651, 1616
TauI GCSGC 1 cut(s) 2009
TfiI GAWTC 2 cut(s) 2237, 2372
Tru1I TTAA 3 cut(s) 1922, 1947, 1988
Tru9I TTAA 3 cut(s) 1922, 1947, 1988
TscAI CASTG 9 cut(s) 437, 519, 1521, 1548, 1602, 1659, 1753, 1979, 2344
TseFI GTSAC 2 cut(s) 404, 1354
TseI GCWGC 6 cut(s) 464, 509, 523, 892, 965, 1190
Tsp45I GTSAC 2 cut(s) 404, 1354
TspGWI ACGGA 3 cut(s) 174, 1859, 2274
TspMI CCCGGG 1 cut(s) 415
TspRI CASTG 9 cut(s) 437, 519, 1521, 1548, 1602, 1659, 1753, 1979, 2344
Van91I CCANNNNNTGG 2 cut(s) 432, 2075
VpaK11BI GGWCC 1 cut(s) 68
VspI ATTAAT 1 cut(s) 1922
XagI CCTNNNNNAGG 1 cut(s) 283
XapI RAATTY 4 cut(s) 301, 667, 1336, 1895
XceI RCATGY 1 cut(s) 1644
XcmI CCANNNNNNNNNTGG 3 cut(s) 1111, 1201, 2080
XmaI CCCGGG 1 cut(s) 415
XmnI GAANNNNTTC 2 cut(s) 1436, 2358
XspI CTAG 3 cut(s) 99, 536, 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.