Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000926

Physical Location & Seq

Genomic Coordinates Forward (+)

49876437 .. 49884940

Gene Structure 8504 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG270600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGGCCGCAGCAATGGGAGAGCGGAGGAGGCCGGAGCAATGGGAAGTCGGAGGAGGTTGCTGCGTTTTGAGAGACGAGGTGAGTGAGAGAGAGACGAGCAATGGCCTCCTCCATCGTCGACAACGCCACCACCGCCGCCGCCATCGTCCTCCAGCAGGCCCCACCACCAAGAGGAAGACAAGAACCGAAATTGAATTGCCCAGCAGCAACAAGAAGCCCTCACAACCCGACCCGCGTTGGGAATGCCCGCGTCCGGCCTCGAACGATGACTCAACCTCTGAGTGGCCAGTGACTTCAGCCAAGCTCAATTTGGCTCCGGCGTCGGCGGAAGAGCAGCTGAGGCACCACGCGCTTCGGCTACACAACCGGGCCTTGGAGGCCTGCGGCGGATTCTTTAAGGGCAATGTCGGGTCGGGTAGTGGGTCCGAGAGTGAGGAGGAAGAAGAGGATTGCAAGGTTGGAGATGAGGAGAATGAGGAGTACAAGTTTTTGTTGAATTTGTTTGTGGAGGAGAGTGGGTTGAGGAGTTATTACGAGGGGAATTGGGATGGTGGTGAGTTCCATTGCTTGGTGTGTGGTGGGTTGGGGAAGACGAAGAAGATCAAGGGTTGTGTCGGGCTTGTTCACCACGCGGTTTCGATAAGCAAGACGAAGAAGAAGAGAGCTCATAGGGCTTTTGCTCAGGTTGTGTGTAGGGTTTTAGGGTGGGATTTTGACCGGCTGCCCATTGTTGTGCTCAAAGGCGAAAGGCTCAGTTTTTATTTGGCAAAACCGGGCGATGAACGGGGTGAGAGTGAGGTAAATGCCGGTGCTAGTGAGGCTGTTTCGGGTGCTGTTAAAGACAATGTGGGAGATGAAAGGGATGGAAATGCCGAGTCAGGTGAAAAGGAAGCATCTAATGGAGACCTAATGATTTGTCAGAAATCTTTGAAAGATGATGATGCAAATCAATGCAAAGAAACCCTTAATAAGGGGATATCAGAAATCAAAGAAGAGAAAGAAGAGGCAATGGATACGCGGAGTGAGCCTGAGTTAAATGTTGACCAGTTGGATAGTGCACTGAAAGACAATGTGGCAGCTGAAACTGATGCTCTTGCTGAATATAGTGAAAAGGAGGCATTTGATGATCATCAGTGCAATGGTAAAGAACCAATCATCTGTCAGAGCTCTTTGAAAGATGACTGTACAGATAAAAGCATAGAAAGCCTTGATGAGGGAAAGACAGTATTAATGAAGGAAGCAATTGGAGAAGAAGCAAAGGATGCATTGACTCCGCTTATGTTGGCTGCAATGCATGGCAAGATCTCATGCGTGCGAAAGCTTCTTGAAGTAGGAGCAAATGTATTAATGTTCGATTCCCTTCTCGAAAGAACTTGTTTGCATTATGCTGCTTACTATGGCCATGCCAATTGCCTCCAGGCCATTGTTTCCGCTGCTCAATCAAATCATGTAGCTGTTTCATGGCCTGAATGTGTACGTATATTGTTAGACAACGGAGCTCTTGTTTGTGCTTCAACTGGCGGATATGGCTGCCCAGGAAGCACTCCGCTGCATTTGGCGGCAAGAGGGGGATCTCTGGATTGTATACAAGGATTGTTGGCATGGGGTGCAGATCGCGCTCAAAGAGATGGATCGGGGAGAATGCCATATATAGTTGCTTTGAAACACAAACATGGAGCTTGTGCAGCTATGCTAAATCCGTCATCAGCTGAGCCTCTGGTGTGGCCATCACCTTTGAAGTTTATTAGTGAGCTTAATGAGGAGGCAAAAGCTTTGTTAGAACAGGCCTTAACGGAGGCAAACAAGGAGAGGGAGAAGAATATCTTGAAAGGAAGCGGTTACTCTCTTGCATCTCCATCGCATTCTGATGTGCATTCTGATATAGGGATGGATGACAATCTTTCTGAGGTAATTTCCTACCTTCCTGTCTATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050896 GO:0051704 GO:0051707 GO:0051865 GO:0070647 GO:0071704 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 Ank_5

Protein Analysis

645

Amino Acids

70.53

Weight (kDa)

5.4

Isoelectric Point (pI)

48.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	412 - 478	5.5e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	428 - 473	2.3e-06	Ankyrin repeats (many copies)
Ank_2	PF12796	487 - 565	2.3e-06	Ankyrin repeats (3 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78810 AT1G78810 AT1G78810
fragaria_vesca	FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260
malus_domestica	MD11G1264000.v1.1
prunus_persica	Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1
pyrus_communis	pycom11g23250
rosa_chinensis	RchiOBHm_Chr1g0314351 RchiOBHm_Chr1g0357411 RchiOBHm_Chr5g0030881 RchiOBHm_Chr5g0030891 RchiOBHm_Chr7g0196621
rosa_laevigata	RLG00000007052 RLG00000008751 RLG00000033260 RLG00000033263
rosa_multiflora	Rmu_co8438113.1_g000001 Rmu_co8456075.1_g000001 Rmu_sc0001974.1_g000027 Rmu_sc0001974.1_g000028 Rmu_sc0002294.1_g000038
rosa_roxburghii	Rroxscaffold_1G00049380
rosa_rugosa	Rorug01G0364900 Rorug05G0121100 Rorug05G0121200 Rorug05G0121200 Rorug05G0121200 Rorug05G0121300 Rorug05G0121400
rosa_samantha	Rh1AG010400 Rh1AG270600 Rh2CG352200 Rh3CG359400 Rh4AG035000 Rh4BG053800 Rh4CG032500 Rh4DG105900 Rh5AG214200 Rh5AG214300 Rh5AG214400 Rh5BG213400 Rh5CG237200 Rh5CG237300 Rh5CG377800 Rh5DG217800 Rh7DG204700 Rh7DG406500
rosa_wichuraiana	Rw5G019580 Rw5G019590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	342
AccB7I	CCANNNNNTGG	1 cut(s)	568
AccBSI	CCGCTC	1 cut(s)	22
AccI	GTMKAC	2 cut(s)	118, 1585
AccII	CGCG	6 cut(s)	235, 250, 350, 632, 1018, 1617
AclWI	GGATC	2 cut(s)	1579, 1639
AcoI	YGGCCR	4 cut(s)	3, 284, 1399, 1724
AcsI	RAATTY	1 cut(s)	496
AcuI	CTGAAG	1 cut(s)	279
AcyI	GRCGYC	1 cut(s)	320
AfaI	GTAC	3 cut(s)	482, 1186, 1476
AfiI	CCNNNNNNNGG	9 cut(s)	155, 171, 238, 253, 282, 373, 568, 970, 1213
AgsI	TTSAA	9 cut(s)	194, 496, 931, 1174, 1328, 1515, 1663, 1738, 1828
AjnI	CCWGG	2 cut(s)	1416, 1534
Alw21I	GWGCWC	5 cut(s)	667, 738, 1060, 1169, 1501
Alw26I	GTCTC	3 cut(s)	66, 86, 897
Alw44I	GTGCAC	1 cut(s)	1056
AlwI	GGATC	2 cut(s)	1579, 1639
ApaLI	GTGCAC	1 cut(s)	1056
ApoI	RAATTY	1 cut(s)	496
AseI	ATTAAT	2 cut(s)	1229, 1346
AspLEI	GCGC	2 cut(s)	352, 1619
AspS9I	GGNCC	3 cut(s)	158, 369, 423
AsuC2I	CCSGG	2 cut(s)	368, 774
AsuHPI	GGTGA	6 cut(s)	91, 566, 617, 800, 893, 1722
AvaII	GGWCC	1 cut(s)	423
BaeGI	GKGCMC	1 cut(s)	1060
BalI	TGGCCA	3 cut(s)	286, 1401, 1726
BanI	GGYRCC	1 cut(s)	342
BanII	GRGCYC	3 cut(s)	667, 1169, 1501
BbsI	GAAGAC	2 cut(s)	182, 596
Bbv12I	GWGCWC	5 cut(s)	667, 738, 1060, 1169, 1501
BbvCI	CCTCAGC	1 cut(s)	338
BccI	CCATC	8 cut(s)	120, 150, 542, 857, 1622, 1735, 1864, 1882
BcgI	CGANNNNNNTGC	2 cut(s)	1839, 1873
BciT130I	CCWGG	2 cut(s)	1418, 1536
BciVI	GTATCC	1 cut(s)	1006
BclI	TGATCA	1 cut(s)	1126
BcnI	CCSGG	2 cut(s)	368, 774
BcoDI	GTCTC	3 cut(s)	66, 86, 897
BfaI	CTAG	1 cut(s)	813
BfuI	GTATCC	1 cut(s)	1006
BglI	GCCNNNNNGGC	1 cut(s)	377
BglII	AGATCT	1 cut(s)	1302
BlpI	GCTNAGC	1 cut(s)	1710
Bme1390I	CCNGG	4 cut(s)	368, 774, 1418, 1536
Bme18I	GGWCC	1 cut(s)	423
BmgT120I	GGNCC	3 cut(s)	158, 369, 423
BmiI	GGNNCC	4 cut(s)	160, 315, 344, 424
BmrFI	CCNGG	4 cut(s)	368, 774, 1418, 1536
BmsI	GCATC	5 cut(s)	902, 931, 1078, 1252, 1859
BpiI	GAAGAC	2 cut(s)	182, 596
BpmI	CTGGAG	2 cut(s)	135, 1400
Bpu10I	CCTNAGC	2 cut(s)	338, 681
Bpu1102I	GCTNAGC	1 cut(s)	1710
BpuMI	CCSGG	2 cut(s)	368, 774
BsaAI	YACGTR	1 cut(s)	1478
BsaBI	GATNNNNATC	3 cut(s)	945, 1128, 1896
BsaHI	GRCGYC	1 cut(s)	320
BsaI	GGTCTC	1 cut(s)	897
BsaJI	CCNNGG	2 cut(s)	372, 1534
BsaXI	ACNNNNNCTCC	8 cut(s)	470, 500, 503, 533, 1326, 1356, 1488, 1518
Bsc4I	CCNNNNNNNGG	9 cut(s)	155, 171, 238, 253, 282, 373, 568, 970, 1213
Bse118I	RCCGGY	2 cut(s)	717, 806
Bse1I	ACTGG	3 cut(s)	287, 1045, 1522
Bse3DI	GCAATG	8 cut(s)	18, 44, 106, 409, 562, 1014, 1144, 1296
Bse8I	GATNNNNATC	3 cut(s)	945, 1128, 1896
BseBI	CCWGG	2 cut(s)	1418, 1536
BseDI	CCNNGG	2 cut(s)	372, 1534
BseGI	GGATG	5 cut(s)	553, 868, 1267, 1893, 1897
BseJI	GATNNNNATC	3 cut(s)	945, 1128, 1896
BseLI	CCNNNNNNNGG	9 cut(s)	155, 171, 238, 253, 282, 373, 568, 970, 1213
BseMI	GCAATG	8 cut(s)	18, 44, 106, 409, 562, 1014, 1144, 1296
BseMII	CTCAG	7 cut(s)	270, 329, 695, 766, 1020, 1701, 1896
BseNI	ACTGG	3 cut(s)	287, 1045, 1522
BseRI	GAGGAG	9 cut(s)	40, 66, 98, 449, 482, 491, 524, 538, 1775
BseSI	GKGCMC	1 cut(s)	1060
BseYI	CCCAGC	1 cut(s)	200
BsgI	GTGCAG	2 cut(s)	1629, 1704
Bsh1236I	CGCG	6 cut(s)	235, 250, 350, 632, 1018, 1617
BshNI	GGYRCC	1 cut(s)	342
BsiHKAI	GWGCWC	5 cut(s)	667, 738, 1060, 1169, 1501
BsiSI	CCGG	7 cut(s)	32, 254, 317, 367, 718, 773, 807
BslI	CCNNNNNNNGG	9 cut(s)	155, 171, 238, 253, 282, 373, 568, 970, 1213
BsmAI	GTCTC	3 cut(s)	66, 86, 897
BsmBI	CGTCTC	2 cut(s)	66, 86
BsmI	GAATGC	4 cut(s)	248, 1647, 1861, 1873
Bso31I	GGTCTC	1 cut(s)	897
Bsp1286I	GDGCHC	5 cut(s)	667, 738, 1060, 1169, 1501
Bsp1407I	TGTACA	1 cut(s)	1184
Bsp143I	GATC	6 cut(s)	600, 1126, 1302, 1571, 1612, 1631
Bsp1720I	GCTNAGC	1 cut(s)	1710
BspCNI	CTCAG	7 cut(s)	271, 330, 694, 765, 1021, 1702, 1897
BspFNI	CGCG	6 cut(s)	235, 250, 350, 632, 1018, 1617
BspLI	GGNNCC	4 cut(s)	160, 315, 344, 424
BspPI	GGATC	2 cut(s)	1579, 1639
BspQI	GCTCTTC	1 cut(s)	324
BspT107I	GGYRCC	1 cut(s)	342
BspTNI	GGTCTC	1 cut(s)	897
BsrBI	CCGCTC	1 cut(s)	22
BsrDI	GCAATG	8 cut(s)	18, 44, 106, 409, 562, 1014, 1144, 1296
BsrFI	RCCGGY	2 cut(s)	717, 806
BsrGI	TGTACA	1 cut(s)	1184
BsrI	ACTGG	3 cut(s)	287, 1045, 1522
BssAI	RCCGGY	2 cut(s)	717, 806
BssECI	CCNNGG	2 cut(s)	372, 1534
BssMI	GATC	6 cut(s)	600, 1126, 1302, 1571, 1612, 1631
BssNAI	GTATAC	1 cut(s)	1586
BssNI	GRCGYC	1 cut(s)	320
BssT1I	CCWWGG	1 cut(s)	372
Bst1107I	GTATAC	1 cut(s)	1586
Bst2UI	CCWGG	2 cut(s)	1418, 1536
Bst4CI	ACNGT	2 cut(s)	1184, 1225
Bst6I	CTCTTC	5 cut(s)	324, 438, 653, 987, 996
BstACI	GRCGYC	1 cut(s)	320
BstAPI	GCANNNNNTGC	2 cut(s)	1262, 1607
BstAUI	TGTACA	1 cut(s)	1184
BstBAI	YACGTR	1 cut(s)	1478
BstC8I	GCNNGC	4 cut(s)	157, 248, 382, 1313
BstDEI	CTNAG	7 cut(s)	279, 338, 681, 752, 1029, 1710, 1905
BstENI	CCTNNNNNAGG	3 cut(s)	153, 968, 1211
BstF5I	GGATG	5 cut(s)	553, 868, 1267, 1893, 1897
BstFNI	CGCG	6 cut(s)	235, 250, 350, 632, 1018, 1617
BstHHI	GCGC	2 cut(s)	352, 1619
BstKTI	GATC	6 cut(s)	603, 1129, 1305, 1574, 1615, 1634
BstMAI	GTCTC	3 cut(s)	66, 86, 897
BstMBI	GATC	6 cut(s)	600, 1126, 1302, 1571, 1612, 1631
BstNI	CCWGG	2 cut(s)	1418, 1536
BstSCI	CCNGG	4 cut(s)	366, 772, 1416, 1534
BstSLI	GKGCMC	1 cut(s)	1060
BstSNI	TACGTA	1 cut(s)	1478
BstUI	CGCG	6 cut(s)	235, 250, 350, 632, 1018, 1617
BstV2I	GAAGAC	2 cut(s)	182, 596
BstX2I	RGATCY	2 cut(s)	1302, 1571
BstYI	RGATCY	2 cut(s)	1302, 1571
BstZ17I	GTATAC	1 cut(s)	1586
BsuI	GTATCC	1 cut(s)	1006
BtgZI	GCGATG	2 cut(s)	792, 1842
BtsCI	GGATG	5 cut(s)	553, 868, 1267, 1893, 1897
BtsIMutI	CAGTG	3 cut(s)	294, 1058, 1139
Cac8I	GCNNGC	4 cut(s)	157, 248, 382, 1313
CfoI	GCGC	2 cut(s)	352, 1619
Cfr10I	RCCGGY	2 cut(s)	717, 806
Cfr13I	GGNCC	3 cut(s)	158, 369, 423
CseI	GACGC	2 cut(s)	239, 309
Csp6I	GTAC	3 cut(s)	481, 1185, 1475
CviAII	CATG	7 cut(s)	1295, 1308, 1403, 1448, 1461, 1602, 1673
CviQI	GTAC	3 cut(s)	481, 1185, 1475
DdeI	CTNAG	7 cut(s)	279, 338, 681, 752, 1029, 1710, 1905
DpnI	GATC	6 cut(s)	602, 1128, 1304, 1573, 1614, 1633
DpnII	GATC	6 cut(s)	600, 1126, 1302, 1571, 1612, 1631
EaeI	YGGCCR	4 cut(s)	3, 284, 1399, 1724
Eam1104I	CTCTTC	5 cut(s)	324, 438, 653, 987, 996
EarI	CTCTTC	5 cut(s)	324, 438, 653, 987, 996
EciI	GGCGGA	3 cut(s)	341, 402, 1536
Ecl136II	GAGCTC	3 cut(s)	665, 1167, 1499
Eco105I	TACGTA	1 cut(s)	1478
Eco130I	CCWWGG	1 cut(s)	372
Eco147I	AGGCCT	2 cut(s)	380, 1787
Eco24I	GRGCYC	3 cut(s)	667, 1169, 1501
Eco31I	GGTCTC	1 cut(s)	897
Eco32I	GATATC	1 cut(s)	978
Eco47I	GGWCC	1 cut(s)	423
Eco53kI	GAGCTC	3 cut(s)	665, 1167, 1499
Eco57I	CTGAAG	1 cut(s)	279
EcoICRI	GAGCTC	3 cut(s)	665, 1167, 1499
EcoNI	CCTNNNNNAGG	3 cut(s)	153, 968, 1211
EcoO109I	RGGNCCY	1 cut(s)	158
EcoRII	CCWGG	2 cut(s)	1416, 1534
EcoRV	GATATC	1 cut(s)	978
EcoT14I	CCWWGG	1 cut(s)	372
EcoT22I	ATGCAT	2 cut(s)	1267, 1296
EcoT38I	GRGCYC	3 cut(s)	667, 1169, 1501
ErhI	CCWWGG	1 cut(s)	372
Esp3I	CGTCTC	2 cut(s)	66, 86
FaeI	CATG	7 cut(s)	1298, 1311, 1406, 1451, 1464, 1605, 1676
FalI	AAGNNNNNCTT	4 cut(s)	948, 980, 1808, 1840
FatI	CATG	7 cut(s)	1294, 1307, 1402, 1447, 1460, 1601, 1672
FauI	CCCGC	2 cut(s)	240, 255
FbaI	TGATCA	1 cut(s)	1126
FblI	GTMKAC	2 cut(s)	118, 1585
FokI	GGATG	5 cut(s)	560, 875, 1274, 1900, 1904
FriOI	GRGCYC	3 cut(s)	667, 1169, 1501
FspBI	CTAG	1 cut(s)	813
GlaI	GCGC	2 cut(s)	351, 1618
GsaI	CCCAGC	1 cut(s)	204
GsuI	CTGGAG	2 cut(s)	135, 1400
HapII	CCGG	7 cut(s)	32, 254, 317, 367, 718, 773, 807
HgaI	GACGC	2 cut(s)	239, 309
HhaI	GCGC	2 cut(s)	352, 1619
Hin1I	GRCGYC	1 cut(s)	320
Hin1II	CATG	7 cut(s)	1298, 1311, 1406, 1451, 1464, 1605, 1676
Hin6I	GCGC	2 cut(s)	350, 1617
HinP1I	GCGC	2 cut(s)	350, 1617
HincII	GTYRAC	2 cut(s)	119, 1042
HindII	GTYRAC	2 cut(s)	119, 1042
HindIII	AAGCTT	2 cut(s)	1319, 1770
HinfI	GANTC	5 cut(s)	269, 390, 875, 1270, 1355
HpaII	CCGG	7 cut(s)	32, 254, 317, 367, 718, 773, 807
HphI	GGTGA	6 cut(s)	91, 566, 617, 800, 893, 1722
Hpy166II	GTNNAC	6 cut(s)	119, 625, 1042, 1058, 1475, 1586
Hpy188I	TCNGA	9 cut(s)	50, 280, 427, 921, 982, 1164, 1867, 1879, 1906
Hpy188III	TCNNGA	4 cut(s)	1325, 1364, 1577, 1825
Hpy8I	GTNNAC	6 cut(s)	119, 625, 1042, 1058, 1475, 1586
Hpy99I	CGWCG	2 cut(s)	120, 325
HpyAV	CCTTC	3 cut(s)	1228, 1370, 1931
HpyCH4III	ACNGT	2 cut(s)	1184, 1225
HpyCH4IV	ACGT	1 cut(s)	1477
HpyF3I	CTNAG	7 cut(s)	279, 338, 681, 752, 1029, 1710, 1905
HpySE526I	ACGT	1 cut(s)	1477
Hsp92I	GRCGYC	1 cut(s)	320
Hsp92II	CATG	7 cut(s)	1298, 1311, 1406, 1451, 1464, 1605, 1676
HspAI	GCGC	2 cut(s)	350, 1617
Ksp22I	TGATCA	1 cut(s)	1126
Kzo9I	GATC	6 cut(s)	600, 1126, 1302, 1571, 1612, 1631
LguI	GCTCTTC	1 cut(s)	324
LmnI	GCTCC	5 cut(s)	34, 319, 1334, 1496, 1676
LweI	GCATC	5 cut(s)	902, 931, 1078, 1252, 1859
MaeI	CTAG	1 cut(s)	813
MaeII	ACGT	1 cut(s)	1477
MaeIII	GTNAC	2 cut(s)	289, 1838
MalI	GATC	6 cut(s)	602, 1128, 1304, 1573, 1614, 1633
MbiI	CCGCTC	1 cut(s)	22
MboI	GATC	6 cut(s)	600, 1126, 1302, 1571, 1612, 1631
MfeI	CAATTG	2 cut(s)	1242, 1408
MflI	RGATCY	2 cut(s)	1302, 1571
MhlI	GDGCHC	5 cut(s)	667, 738, 1060, 1169, 1501
MlsI	TGGCCA	3 cut(s)	286, 1401, 1726
MluCI	AATT	8 cut(s)	189, 194, 307, 496, 541, 1242, 1408, 1911
MluNI	TGGCCA	3 cut(s)	286, 1401, 1726
MlyI	GAGTC	3 cut(s)	263, 884, 1264
MmeI	TCCRAC	3 cut(s)	28, 439, 1029
Mox20I	TGGCCA	3 cut(s)	286, 1401, 1726
Mph1103I	ATGCAT	2 cut(s)	1267, 1296
MscI	TGGCCA	3 cut(s)	286, 1401, 1726
MseI	TTAA	8 cut(s)	396, 837, 966, 1034, 1229, 1346, 1755, 1790
MslI	CAYNNNNRTG	3 cut(s)	731, 1671, 1866
Msp20I	TGGCCA	3 cut(s)	286, 1401, 1726
MspA1I	CMGCKG	5 cut(s)	337, 1079, 1433, 1549, 1709
MspI	CCGG	7 cut(s)	32, 254, 317, 367, 718, 773, 807
MspR9I	CCNGG	4 cut(s)	368, 774, 1418, 1536
MunI	CAATTG	2 cut(s)	1242, 1408
Mva1269I	GAATGC	4 cut(s)	248, 1647, 1861, 1873
MvaI	CCWGG	2 cut(s)	1418, 1536
MvnI	CGCG	6 cut(s)	235, 250, 350, 632, 1018, 1617
NciI	CCSGG	2 cut(s)	368, 774
NdeII	GATC	6 cut(s)	600, 1126, 1302, 1571, 1612, 1631
NlaIII	CATG	7 cut(s)	1298, 1311, 1406, 1451, 1464, 1605, 1676
NlaIV	GGNNCC	4 cut(s)	160, 315, 344, 424
NmeAIII	GCCGAG	1 cut(s)	898
NmuCI	GTSAC	1 cut(s)	289
NsiI	ATGCAT	2 cut(s)	1267, 1296
PceI	AGGCCT	2 cut(s)	380, 1787
PciSI	GCTCTTC	1 cut(s)	324
PctI	GAATGC	4 cut(s)	248, 1647, 1861, 1873
PfeI	GAWTC	2 cut(s)	390, 1355
PflMI	CCANNNNNTGG	1 cut(s)	568
PleI	GAGTC	3 cut(s)	263, 883, 1264
PpsI	GAGTC	3 cut(s)	263, 883, 1264
Ppu21I	YACGTR	1 cut(s)	1478
PshBI	ATTAAT	2 cut(s)	1229, 1346
Psp124BI	GAGCTC	3 cut(s)	667, 1169, 1501
Psp6I	CCWGG	2 cut(s)	1416, 1534
PspFI	CCCAGC	1 cut(s)	200
PspGI	CCWGG	2 cut(s)	1416, 1534
PspN4I	GGNNCC	4 cut(s)	160, 315, 344, 424
PspPI	GGNCC	3 cut(s)	158, 369, 423
PsuI	RGATCY	2 cut(s)	1302, 1571
PvuII	CAGCTG	3 cut(s)	337, 1079, 1709
RsaI	GTAC	3 cut(s)	482, 1186, 1476
RsaNI	GTAC	3 cut(s)	481, 1185, 1475
RseI	CAYNNNNRTG	3 cut(s)	731, 1671, 1866
SacI	GAGCTC	3 cut(s)	667, 1169, 1501
SalI	GTCGAC	1 cut(s)	117
SapI	GCTCTTC	1 cut(s)	324
SaqAI	TTAA	8 cut(s)	396, 837, 966, 1034, 1229, 1346, 1755, 1790
Sau3AI	GATC	6 cut(s)	600, 1126, 1302, 1571, 1612, 1631
Sau96I	GGNCC	3 cut(s)	158, 369, 423
SchI	GAGTC	3 cut(s)	263, 884, 1264
ScrFI	CCNGG	4 cut(s)	368, 774, 1418, 1536
SduI	GDGCHC	5 cut(s)	667, 738, 1060, 1169, 1501
SfaNI	GCATC	5 cut(s)	902, 931, 1078, 1252, 1859
SfiI	GGCCNNNNNGGCC	1 cut(s)	377
SinI	GGWCC	1 cut(s)	423
SmiMI	CAYNNNNRTG	3 cut(s)	731, 1671, 1866
SnaBI	TACGTA	1 cut(s)	1478
Sse9I	AATT	8 cut(s)	189, 194, 307, 496, 541, 1242, 1408, 1911
SseBI	AGGCCT	2 cut(s)	380, 1787
SspMI	CTAG	1 cut(s)	813
SstI	GAGCTC	3 cut(s)	667, 1169, 1501
StuI	AGGCCT	2 cut(s)	380, 1787
StyD4I	CCNGG	4 cut(s)	366, 772, 1416, 1534
StyI	CCWWGG	1 cut(s)	372
TaaI	ACNGT	2 cut(s)	1184, 1225
TaiI	ACGT	1 cut(s)	1480
TaqI	TCGA	5 cut(s)	118, 260, 638, 1353, 1365
TasI	AATT	8 cut(s)	189, 194, 307, 496, 541, 1242, 1408, 1911
TatI	WGTACW	2 cut(s)	480, 1184
TauI	GCSGC	5 cut(s)	8, 138, 141, 387, 1562
TfiI	GAWTC	2 cut(s)	390, 1355
Tru1I	TTAA	8 cut(s)	396, 837, 966, 1034, 1229, 1346, 1755, 1790
Tru9I	TTAA	8 cut(s)	396, 837, 966, 1034, 1229, 1346, 1755, 1790
TscAI	CASTG	3 cut(s)	294, 1065, 1139
TseFI	GTSAC	1 cut(s)	289
Tsp45I	GTSAC	1 cut(s)	289
TspDTI	ATGAA	4 cut(s)	795, 870, 1247, 1449
TspGWI	ACGGA	3 cut(s)	1509, 1689, 1808
TspRI	CASTG	3 cut(s)	294, 1065, 1139
Van91I	CCANNNNNTGG	1 cut(s)	568
VneI	GTGCAC	1 cut(s)	1056
VpaK11BI	GGWCC	1 cut(s)	423
VspI	ATTAAT	2 cut(s)	1229, 1346
XagI	CCTNNNNNAGG	3 cut(s)	153, 968, 1211
XapI	RAATTY	1 cut(s)	496
XcmI	CCANNNNNNNNNTGG	1 cut(s)	307
XmiI	GTMKAC	2 cut(s)	118, 1585
XspI	CTAG	1 cut(s)	813
Zsp2I	ATGCAT	2 cut(s)	1267, 1296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.