Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000926

Physical Location & Seq

Genomic Coordinates Forward (+)

1626219 .. 1638562

Gene Structure 12344 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG010400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGGCCTCCTCCATCATCGACAACGCCACCACCGCCGCCGCCATCGTCCTCCAGCAGGCCGCCTGGGGCTTCTCCGAGAGCAAGTTCGAGCAGGGCGACAAGGGGAAGGCTAATGGTCCCCCTAATCGCCGAAACCCCATTCCCAATTCCAAAATCCGAGCCACGCCAAATGGCGGAAAACCCCAATTGCCGTACCCGATTGCCGCCCAAGAAGGCCCCACCACCAAGAGGAAGACAAGAACCGAAATTGAATTGCCCAGCAGCAACAAGAAGCCCTCACAACCCGACCCGCGTTGGGAATGCCCGCATCTGGCCTCGAACGATGACTCAACCTCTGAGTGGCCAGTGACTTCAGCCAAGCTCAATTTGGCTCCGGCGTCGGCGGAAGAGCAGCTGAGGCACCACGCACTTCGGCTACACAACCGGGCCTTGGAGGCCTGTGGCGGATTCTTTAAGGGCAATGCCGGGTCGGGTAGTGGGTCCGAGAGTGAGGAGGGAGAAGAGGATTGCAAGGTTGGAGATGAGGAGAATGAGGAGTACAAGTTTTTGTTGAATTTGTTTGTGGAGGAGAGTGGGTTGAGGAGTTATTACGAGGGGAATTGGGATGGTGGTGAGTTCCATTGCTTGGTGTGTGGTGGGTTGGGGAAGACGAAGAAGATCAAGGGTTGTGTCGGGCTTGTTCACCACGCGGTTTCGATAAGCAAGACGAAGAAGAAGAGAGCTCATAGGGCTTTTGCTCAGGTTGTGTGTAGGGTTTTAGGGTGGGATTTTGACCGGCTGCCCATTGTTGTGCTCAAAGGCGAAAGGCTCAGTTTTTATTTGGCAAAACCGGGCGATGAATGGGGTGAGAGTGAGGTAAATGCCGGTGCTAGTGAGGCTGTTTCGGGTGCTGTTAAAGACAATGTGGGAGATGAAAGGGATGGTAATGCCGAGTCAGGTGAAAAGGAAGCATCTAATGGAGACCTAATGATTTGTCAGAAATCTTTGAAAGATGATGATGCAAATCAATGTAAAGAAACCCTTAATAAGGGGATATCAGAAATTAAAGAAGAGAAAGAAGAGGCAATGGATACGCGGAGTGAGCCTGAGTTAAATGTTGACCAGTTGGATAGTGCACTGAAAGACAATGTGGCAGCTGAAACTGATGCTCCTGCTGAATATAGTGAAAAGGAGGCATTTGATGATCATCAGTGCAATGGTAAAGAACCAATCATCTGTCAGAGCTCTTTGAAAGATGACTGTACAGATAAAAGTATAGAAAGCCTTGATGAGGGAAAGACAGTATTAATGAAGGAAGCAATTGGAGAAGAAGCAAAGGATGCATTGACTCCGCTTATGTTGGCTGCAATGCATGGCAAGATCTCTTGCGTGCGAAAGCTTCTTGAAGTAGGAGCAAATGTATTAATGTTCGATTCCCTTCACGAAAGAACTTGTTTGCATTATGCTGCTTACTATGGCCATGCCAATTGCCTCCAGGCCATTGTTTCCGCTGCTCAATCAAATCATGTAGCTGTTTCATGGCCTGAATGTGTACGTATATTGTTAGACAACGGAGCTCTTGTTTGTGCTTCAACTGGCGGATATGGCTGCCCAGGAAGCACTCCGCTGCATTTGGCGGCAAGAGGGGGATCTCTGGATTGTATACAAGGATTGTTGGCATGGGGTGCAGATCGCGCTCAAAGAGATGGATCGGGGAGAATGCCATATATAGTTGCTTTGAAACACAAACATGGAGCTTGTGCAGCTATGCTAAATCCGTCATCAGCTGAGCCTCTGGTGTGGCCATCACCTTTGAAGTTTATTAGTGAGCTTAGTGAGGAGGCAAAAGCTTTGTTAGAACAGGCCTTAACGGAGGCAAACAAGGAGAGGGAGAAGAATATCTTGAAAGGAAGCGGTTACTCTCTTGCATCTCCATCGCATTCTGATGTGCATTCTGATATAGGGATGGATGACAATCTTTCTGAGGGTACTGAAGACATTGAGTGCATGGCCATGAATATGTATCCCATTAAATCTCATATATACGTGAATGTTGCATCCTTCGAAAAGATGCATAAGCTAAGATTACTAGATCTATACTCGTACTCGTACTCGTACACCAGGGGTGTCAGCAAATTGCACCTTCCTCCAGGTTTCGAGTTTCTCCCTGATGCCCTTAAATATTTGAGGTGGCATTTCTATCCTTTGACATCTCTGCCATCGAGGTTTTCTTCAGAAAATCTTGTCGAGCTTCATATGCCCAGCAGCCGACTTGAGCAACTTTGGAATAAAGGCGTGCAGGTTTGCTTAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050896 GO:0051704 GO:0051707 GO:0051865 GO:0070647 GO:0071704 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 Ank_5

Protein Analysis

764

Amino Acids

83.52

Weight (kDa)

5.43

Isoelectric Point (pI)

48.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	431 - 497	3.1e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	447 - 492	5.1e-06	Ankyrin repeats (many copies)
Ank_2	PF12796	505 - 584	2.9e-06	Ankyrin repeats (3 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000926)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78810 AT1G78810 AT1G78810
fragaria_vesca	FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260 FvH4_3g18260
malus_domestica	MD11G1264000.v1.1
prunus_persica	Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1 Prupe.4G164500_v2.0.a1
pyrus_communis	pycom11g23250
rosa_chinensis	RchiOBHm_Chr1g0314351 RchiOBHm_Chr1g0357411 RchiOBHm_Chr5g0030881 RchiOBHm_Chr5g0030891 RchiOBHm_Chr7g0196621
rosa_laevigata	RLG00000007052 RLG00000008751 RLG00000033260 RLG00000033263
rosa_multiflora	Rmu_co8438113.1_g000001 Rmu_co8456075.1_g000001 Rmu_sc0001974.1_g000027 Rmu_sc0001974.1_g000028 Rmu_sc0002294.1_g000038
rosa_roxburghii	Rroxscaffold_1G00049380
rosa_rugosa	Rorug01G0364900 Rorug05G0121100 Rorug05G0121200 Rorug05G0121200 Rorug05G0121200 Rorug05G0121300 Rorug05G0121400
rosa_samantha	Rh1AG010400 Rh1AG270600 Rh2CG352200 Rh3CG359400 Rh4AG035000 Rh4BG053800 Rh4CG032500 Rh4DG105900 Rh5AG214200 Rh5AG214300 Rh5AG214400 Rh5BG213400 Rh5CG237200 Rh5CG237300 Rh5CG377800 Rh5DG217800 Rh7DG204700 Rh7DG406500
rosa_wichuraiana	Rw5G019580 Rw5G019590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2269
AccB1I	GGYRCC	1 cut(s)	399
AccB7I	CCANNNNNTGG	1 cut(s)	625
AccI	GTMKAC	1 cut(s)	1642
AccII	CGCG	4 cut(s)	292, 689, 1075, 1674
AclWI	GGATC	2 cut(s)	1636, 1696
AcoI	YGGCCR	4 cut(s)	341, 1456, 1781, 1989
AcsI	RAATTY	1 cut(s)	553
AcuI	CTGAAG	3 cut(s)	336, 1992, 2196
AcyI	GRCGYC	1 cut(s)	377
AfaI	GTAC	8 cut(s)	194, 539, 1243, 1533, 1969, 2084, 2090, 2096
AgsI	TTSAA	9 cut(s)	251, 553, 988, 1231, 1385, 1572, 1720, 1795, 1885
AjnI	CCWGG	5 cut(s)	62, 1473, 1591, 2099, 2128
Alw21I	GWGCWC	5 cut(s)	724, 795, 1117, 1226, 1558
Alw26I	GTCTC	1 cut(s)	954
Alw44I	GTGCAC	1 cut(s)	1113
AlwI	GGATC	2 cut(s)	1636, 1696
ApaLI	GTGCAC	1 cut(s)	1113
ApoI	RAATTY	1 cut(s)	553
AseI	ATTAAT	2 cut(s)	1286, 1403
AspLEI	GCGC	1 cut(s)	1676
AspS9I	GGNCC	4 cut(s)	116, 215, 426, 480
AsuC2I	CCSGG	3 cut(s)	425, 466, 831
AsuHPI	GGTGA	5 cut(s)	623, 674, 857, 950, 1779
AsuII	TTCGAA	1 cut(s)	2043
AvaII	GGWCC	2 cut(s)	116, 480
BaeGI	GKGCMC	1 cut(s)	1117
BalI	TGGCCA	4 cut(s)	343, 1458, 1783, 1991
BanI	GGYRCC	1 cut(s)	399
BanII	GRGCYC	3 cut(s)	724, 1226, 1558
BbsI	GAAGAC	3 cut(s)	239, 653, 1980
Bbv12I	GWGCWC	5 cut(s)	724, 795, 1117, 1226, 1558
BbvCI	CCTCAGC	1 cut(s)	395
BccI	CCATC	9 cut(s)	20, 50, 599, 914, 1679, 1792, 1921, 1939, 2206
BceAI	ACGGC	1 cut(s)	175
BcgI	CGANNNNNNTGC	2 cut(s)	1896, 1930
BciT130I	CCWGG	5 cut(s)	64, 1475, 1593, 2101, 2130
BciVI	GTATCC	2 cut(s)	1063, 2013
BclI	TGATCA	1 cut(s)	1183
BcnI	CCSGG	3 cut(s)	425, 466, 831
BcoDI	GTCTC	1 cut(s)	954
BfaI	CTAG	2 cut(s)	870, 2069
BfuAI	ACCTGC	1 cut(s)	2269
BfuI	GTATCC	2 cut(s)	1063, 2013
BglI	GCCNNNNNGGC	1 cut(s)	434
BglII	AGATCT	2 cut(s)	1359, 2071
BlpI	GCTNAGC	1 cut(s)	1767
Bme1390I	CCNGG	8 cut(s)	64, 425, 466, 831, 1475, 1593, 2101, 2130
Bme18I	GGWCC	2 cut(s)	116, 480
BmgT120I	GGNCC	4 cut(s)	116, 215, 426, 480
BmiI	GGNNCC	5 cut(s)	118, 217, 372, 401, 481
BmrFI	CCNGG	8 cut(s)	64, 425, 466, 831, 1475, 1593, 2101, 2130
BmsI	GCATC	9 cut(s)	316, 959, 988, 1135, 1309, 1916, 2040, 2045, 2140
BpiI	GAAGAC	3 cut(s)	239, 653, 1980
BpmI	CTGGAG	3 cut(s)	35, 1457, 2112
Bpu10I	CCTNAGC	2 cut(s)	395, 738
Bpu1102I	GCTNAGC	1 cut(s)	1767
Bpu14I	TTCGAA	1 cut(s)	2043
BpuEI	CTTGAG	1 cut(s)	2273
BpuMI	CCSGG	3 cut(s)	425, 466, 831
BsaAI	YACGTR	2 cut(s)	1535, 2026
BsaBI	GATNNNNATC	3 cut(s)	1002, 1185, 1953
BsaHI	GRCGYC	1 cut(s)	377
BsaI	GGTCTC	1 cut(s)	954
BsaJI	CCNNGG	4 cut(s)	63, 429, 1591, 2100
Bse118I	RCCGGY	2 cut(s)	774, 863
Bse1I	ACTGG	3 cut(s)	344, 1102, 1579
Bse3DI	GCAATG	5 cut(s)	466, 619, 1071, 1201, 1353
Bse8I	GATNNNNATC	3 cut(s)	1002, 1185, 1953
BseBI	CCWGG	5 cut(s)	64, 1475, 1593, 2101, 2130
BseDI	CCNNGG	4 cut(s)	63, 429, 1591, 2100
BseGI	GGATG	6 cut(s)	610, 925, 1324, 1950, 1954, 2036
BseJI	GATNNNNATC	3 cut(s)	1002, 1185, 1953
BseMI	GCAATG	5 cut(s)	466, 619, 1071, 1201, 1353
BseMII	CTCAG	7 cut(s)	327, 386, 752, 823, 1077, 1758, 1953
BseNI	ACTGG	3 cut(s)	344, 1102, 1579
BseRI	GAGGAG	6 cut(s)	506, 539, 548, 581, 595, 1832
BseSI	GKGCMC	1 cut(s)	1117
BseYI	CCCAGC	2 cut(s)	257, 2240
BsgI	GTGCAG	2 cut(s)	1686, 1761
Bsh1236I	CGCG	4 cut(s)	292, 689, 1075, 1674
BshNI	GGYRCC	1 cut(s)	399
BsiHKAI	GWGCWC	5 cut(s)	724, 795, 1117, 1226, 1558
BsiSI	CCGG	6 cut(s)	374, 424, 465, 775, 830, 864
BslFI	GGGAC	1 cut(s)	102
BsmAI	GTCTC	1 cut(s)	954
BsmFI	GGGAC	1 cut(s)	102
BsmI	GAATGC	4 cut(s)	305, 1704, 1918, 1930
Bso31I	GGTCTC	1 cut(s)	954
Bsp119I	TTCGAA	1 cut(s)	2043
Bsp1286I	GDGCHC	5 cut(s)	724, 795, 1117, 1226, 1558
Bsp1407I	TGTACA	1 cut(s)	1241
Bsp143I	GATC	7 cut(s)	657, 1183, 1359, 1628, 1669, 1688, 2071
Bsp1720I	GCTNAGC	1 cut(s)	1767
BspCNI	CTCAG	7 cut(s)	328, 387, 751, 822, 1078, 1759, 1954
BspFNI	CGCG	4 cut(s)	292, 689, 1075, 1674
BspLI	GGNNCC	5 cut(s)	118, 217, 372, 401, 481
BspMI	ACCTGC	1 cut(s)	2269
BspPI	GGATC	2 cut(s)	1636, 1696
BspQI	GCTCTTC	1 cut(s)	381
BspT104I	TTCGAA	1 cut(s)	2043
BspT107I	GGYRCC	1 cut(s)	399
BspTNI	GGTCTC	1 cut(s)	954
BsrDI	GCAATG	5 cut(s)	466, 619, 1071, 1201, 1353
BsrFI	RCCGGY	2 cut(s)	774, 863
BsrGI	TGTACA	1 cut(s)	1241
BsrI	ACTGG	3 cut(s)	344, 1102, 1579
BssAI	RCCGGY	2 cut(s)	774, 863
BssECI	CCNNGG	4 cut(s)	63, 429, 1591, 2100
BssMI	GATC	7 cut(s)	657, 1183, 1359, 1628, 1669, 1688, 2071
BssNAI	GTATAC	1 cut(s)	1643
BssNI	GRCGYC	1 cut(s)	377
BssT1I	CCWWGG	1 cut(s)	429
Bst1107I	GTATAC	1 cut(s)	1643
Bst2UI	CCWGG	5 cut(s)	64, 1475, 1593, 2101, 2130
Bst4CI	ACNGT	2 cut(s)	1241, 1282
Bst6I	CTCTTC	5 cut(s)	381, 495, 710, 1044, 1053
BstACI	GRCGYC	1 cut(s)	377
BstAPI	GCANNNNNTGC	2 cut(s)	1319, 1664
BstAUI	TGTACA	1 cut(s)	1241
BstBAI	YACGTR	2 cut(s)	1535, 2026
BstBI	TTCGAA	1 cut(s)	2043
BstC8I	GCNNGC	4 cut(s)	57, 305, 1370, 2276
BstDEI	CTNAG	9 cut(s)	336, 395, 738, 809, 1086, 1767, 1811, 1962, 2060
BstENI	CCTNNNNNAGG	3 cut(s)	53, 1025, 1268
BstF5I	GGATG	6 cut(s)	610, 925, 1324, 1950, 1954, 2036
BstFNI	CGCG	4 cut(s)	292, 689, 1075, 1674
BstHHI	GCGC	1 cut(s)	1676
BstKTI	GATC	7 cut(s)	660, 1186, 1362, 1631, 1672, 1691, 2074
BstMAI	GTCTC	1 cut(s)	954
BstMBI	GATC	7 cut(s)	657, 1183, 1359, 1628, 1669, 1688, 2071
BstNI	CCWGG	5 cut(s)	64, 1475, 1593, 2101, 2130
BstSCI	CCNGG	8 cut(s)	62, 423, 464, 829, 1473, 1591, 2099, 2128
BstSLI	GKGCMC	1 cut(s)	1117
BstSNI	TACGTA	1 cut(s)	1535
BstUI	CGCG	4 cut(s)	292, 689, 1075, 1674
BstV2I	GAAGAC	3 cut(s)	239, 653, 1980
BstX2I	RGATCY	3 cut(s)	1359, 1628, 2071
BstYI	RGATCY	3 cut(s)	1359, 1628, 2071
BstZ17I	GTATAC	1 cut(s)	1643
BsuI	GTATCC	2 cut(s)	1063, 2013
BtgZI	GCGATG	2 cut(s)	849, 1899
BtsCI	GGATG	6 cut(s)	610, 925, 1324, 1950, 1954, 2036
BtsIMutI	CAGTG	3 cut(s)	351, 1115, 1196
BveI	ACCTGC	1 cut(s)	2269
Cac8I	GCNNGC	4 cut(s)	57, 305, 1370, 2276
CfoI	GCGC	1 cut(s)	1676
Cfr10I	RCCGGY	2 cut(s)	774, 863
Cfr13I	GGNCC	4 cut(s)	116, 215, 426, 480
CseI	GACGC	1 cut(s)	366
Csp6I	GTAC	8 cut(s)	193, 538, 1242, 1532, 1968, 2083, 2089, 2095
CviAII	CATG	8 cut(s)	1352, 1460, 1505, 1518, 1659, 1730, 1987, 1993
CviQI	GTAC	8 cut(s)	193, 538, 1242, 1532, 1968, 2083, 2089, 2095
DdeI	CTNAG	9 cut(s)	336, 395, 738, 809, 1086, 1767, 1811, 1962, 2060
DpnI	GATC	7 cut(s)	659, 1185, 1361, 1630, 1671, 1690, 2073
DpnII	GATC	7 cut(s)	657, 1183, 1359, 1628, 1669, 1688, 2071
EaeI	YGGCCR	4 cut(s)	341, 1456, 1781, 1989
Eam1104I	CTCTTC	5 cut(s)	381, 495, 710, 1044, 1053
EarI	CTCTTC	5 cut(s)	381, 495, 710, 1044, 1053
EciI	GGCGGA	4 cut(s)	189, 398, 459, 1593
Ecl136II	GAGCTC	3 cut(s)	722, 1224, 1556
Eco105I	TACGTA	1 cut(s)	1535
Eco130I	CCWWGG	1 cut(s)	429
Eco147I	AGGCCT	2 cut(s)	437, 1844
Eco24I	GRGCYC	3 cut(s)	724, 1226, 1558
Eco31I	GGTCTC	1 cut(s)	954
Eco32I	GATATC	1 cut(s)	1035
Eco47I	GGWCC	2 cut(s)	116, 480
Eco53kI	GAGCTC	3 cut(s)	722, 1224, 1556
Eco57I	CTGAAG	3 cut(s)	336, 1992, 2196
EcoICRI	GAGCTC	3 cut(s)	722, 1224, 1556
EcoNI	CCTNNNNNAGG	3 cut(s)	53, 1025, 1268
EcoO109I	RGGNCCY	1 cut(s)	215
EcoRII	CCWGG	5 cut(s)	62, 1473, 1591, 2099, 2128
EcoRV	GATATC	1 cut(s)	1035
EcoT14I	CCWWGG	1 cut(s)	429
EcoT22I	ATGCAT	3 cut(s)	1324, 1353, 2055
EcoT38I	GRGCYC	3 cut(s)	724, 1226, 1558
ErhI	CCWWGG	1 cut(s)	429
FaeI	CATG	8 cut(s)	1355, 1463, 1508, 1521, 1662, 1733, 1990, 1996
FalI	AAGNNNNNCTT	4 cut(s)	1005, 1037, 1865, 1897
FaqI	GGGAC	1 cut(s)	102
FatI	CATG	8 cut(s)	1351, 1459, 1504, 1517, 1658, 1729, 1986, 1992
FauI	CCCGC	2 cut(s)	297, 312
FauNDI	CATATG	1 cut(s)	2235
FbaI	TGATCA	1 cut(s)	1183
FblI	GTMKAC	1 cut(s)	1642
FokI	GGATG	6 cut(s)	617, 932, 1331, 1957, 1961, 2023
FriOI	GRGCYC	3 cut(s)	724, 1226, 1558
FspBI	CTAG	2 cut(s)	870, 2069
GlaI	GCGC	1 cut(s)	1675
GsaI	CCCAGC	2 cut(s)	261, 2244
GsuI	CTGGAG	3 cut(s)	35, 1457, 2112
HapII	CCGG	6 cut(s)	374, 424, 465, 775, 830, 864
HgaI	GACGC	1 cut(s)	366
HhaI	GCGC	1 cut(s)	1676
Hin1I	GRCGYC	1 cut(s)	377
Hin1II	CATG	8 cut(s)	1355, 1463, 1508, 1521, 1662, 1733, 1990, 1996
Hin6I	GCGC	1 cut(s)	1674
HinP1I	GCGC	1 cut(s)	1674
HincII	GTYRAC	1 cut(s)	1099
HindII	GTYRAC	1 cut(s)	1099
HindIII	AAGCTT	2 cut(s)	1376, 1827
HinfI	GANTC	5 cut(s)	326, 447, 932, 1327, 1412
HpaII	CCGG	6 cut(s)	374, 424, 465, 775, 830, 864
HphI	GGTGA	5 cut(s)	623, 674, 857, 950, 1779
Hpy166II	GTNNAC	6 cut(s)	682, 1099, 1115, 1532, 1643, 2097
Hpy188III	TCNNGA	4 cut(s)	1382, 1421, 1634, 1882
Hpy8I	GTNNAC	6 cut(s)	682, 1099, 1115, 1532, 1643, 2097
Hpy99I	CGWCG	1 cut(s)	382
HpyAV	CCTTC	6 cut(s)	100, 206, 1285, 1427, 2050, 2132
HpyCH4III	ACNGT	2 cut(s)	1241, 1282
HpyCH4IV	ACGT	2 cut(s)	1534, 2025
HpyF3I	CTNAG	9 cut(s)	336, 395, 738, 809, 1086, 1767, 1811, 1962, 2060
HpySE526I	ACGT	2 cut(s)	1534, 2025
Hsp92I	GRCGYC	1 cut(s)	377
Hsp92II	CATG	8 cut(s)	1355, 1463, 1508, 1521, 1662, 1733, 1990, 1996
HspAI	GCGC	1 cut(s)	1674
Ksp22I	TGATCA	1 cut(s)	1183
Kzo9I	GATC	7 cut(s)	657, 1183, 1359, 1628, 1669, 1688, 2071
LguI	GCTCTTC	1 cut(s)	381
LmnI	GCTCC	5 cut(s)	376, 1153, 1391, 1553, 1733
LweI	GCATC	9 cut(s)	316, 959, 988, 1135, 1309, 1916, 2040, 2045, 2140
MaeI	CTAG	2 cut(s)	870, 2069
MaeII	ACGT	2 cut(s)	1534, 2025
MaeIII	GTNAC	2 cut(s)	346, 1895
MalI	GATC	7 cut(s)	659, 1185, 1361, 1630, 1671, 1690, 2073
MboI	GATC	7 cut(s)	657, 1183, 1359, 1628, 1669, 1688, 2071
MfeI	CAATTG	3 cut(s)	185, 1299, 1465
MflI	RGATCY	3 cut(s)	1359, 1628, 2071
MhlI	GDGCHC	5 cut(s)	724, 795, 1117, 1226, 1558
MlsI	TGGCCA	4 cut(s)	343, 1458, 1783, 1991
MluNI	TGGCCA	4 cut(s)	343, 1458, 1783, 1991
MlyI	GAGTC	3 cut(s)	320, 941, 1321
MmeI	TCCRAC	2 cut(s)	496, 1086
Mox20I	TGGCCA	4 cut(s)	343, 1458, 1783, 1991
Mph1103I	ATGCAT	3 cut(s)	1324, 1353, 2055
MscI	TGGCCA	4 cut(s)	343, 1458, 1783, 1991
MslI	CAYNNNNRTG	5 cut(s)	788, 1728, 1923, 1991, 1997
Msp20I	TGGCCA	4 cut(s)	343, 1458, 1783, 1991
MspA1I	CMGCKG	5 cut(s)	394, 1136, 1490, 1606, 1766
MspI	CCGG	6 cut(s)	374, 424, 465, 775, 830, 864
MspR9I	CCNGG	8 cut(s)	64, 425, 466, 831, 1475, 1593, 2101, 2130
MunI	CAATTG	3 cut(s)	185, 1299, 1465
Mva1269I	GAATGC	4 cut(s)	305, 1704, 1918, 1930
MvaI	CCWGG	5 cut(s)	64, 1475, 1593, 2101, 2130
MvnI	CGCG	4 cut(s)	292, 689, 1075, 1674
NciI	CCSGG	3 cut(s)	425, 466, 831
NdeI	CATATG	1 cut(s)	2235
NdeII	GATC	7 cut(s)	657, 1183, 1359, 1628, 1669, 1688, 2071
NlaIII	CATG	8 cut(s)	1355, 1463, 1508, 1521, 1662, 1733, 1990, 1996
NlaIV	GGNNCC	5 cut(s)	118, 217, 372, 401, 481
NmeAIII	GCCGAG	1 cut(s)	955
NmuCI	GTSAC	1 cut(s)	346
NsiI	ATGCAT	3 cut(s)	1324, 1353, 2055
NspV	TTCGAA	1 cut(s)	2043
PceI	AGGCCT	2 cut(s)	437, 1844
PciSI	GCTCTTC	1 cut(s)	381
PcsI	WCGNNNNNNNCGW	1 cut(s)	93
PctI	GAATGC	4 cut(s)	305, 1704, 1918, 1930
PfeI	GAWTC	2 cut(s)	447, 1412
PflMI	CCANNNNNTGG	1 cut(s)	625
PleI	GAGTC	3 cut(s)	320, 940, 1321
PpsI	GAGTC	3 cut(s)	320, 940, 1321
Ppu21I	YACGTR	2 cut(s)	1535, 2026
PshBI	ATTAAT	2 cut(s)	1286, 1403
Psp124BI	GAGCTC	3 cut(s)	724, 1226, 1558
Psp6I	CCWGG	5 cut(s)	62, 1473, 1591, 2099, 2128
PspFI	CCCAGC	2 cut(s)	257, 2240
PspGI	CCWGG	5 cut(s)	62, 1473, 1591, 2099, 2128
PspN4I	GGNNCC	5 cut(s)	118, 217, 372, 401, 481
PspPI	GGNCC	4 cut(s)	116, 215, 426, 480
PsuI	RGATCY	3 cut(s)	1359, 1628, 2071
PvuII	CAGCTG	3 cut(s)	394, 1136, 1766
RsaI	GTAC	8 cut(s)	194, 539, 1243, 1533, 1969, 2084, 2090, 2096
RsaNI	GTAC	8 cut(s)	193, 538, 1242, 1532, 1968, 2083, 2089, 2095
RseI	CAYNNNNRTG	5 cut(s)	788, 1728, 1923, 1991, 1997
SacI	GAGCTC	3 cut(s)	724, 1226, 1558
SapI	GCTCTTC	1 cut(s)	381
Sau3AI	GATC	7 cut(s)	657, 1183, 1359, 1628, 1669, 1688, 2071
Sau96I	GGNCC	4 cut(s)	116, 215, 426, 480
SchI	GAGTC	3 cut(s)	320, 941, 1321
ScrFI	CCNGG	8 cut(s)	64, 425, 466, 831, 1475, 1593, 2101, 2130
SduI	GDGCHC	5 cut(s)	724, 795, 1117, 1226, 1558
SfaNI	GCATC	9 cut(s)	316, 959, 988, 1135, 1309, 1916, 2040, 2045, 2140
SfiI	GGCCNNNNNGGCC	1 cut(s)	434
SfuI	TTCGAA	1 cut(s)	2043
SinI	GGWCC	2 cut(s)	116, 480
SmiMI	CAYNNNNRTG	5 cut(s)	788, 1728, 1923, 1991, 1997
SmlI	CTYRAG	1 cut(s)	2252
SmoI	CTYRAG	1 cut(s)	2252
SnaBI	TACGTA	1 cut(s)	1535
SseBI	AGGCCT	2 cut(s)	437, 1844
SspI	AATATT	1 cut(s)	2162
SspMI	CTAG	2 cut(s)	870, 2069
SstI	GAGCTC	3 cut(s)	724, 1226, 1558
StuI	AGGCCT	2 cut(s)	437, 1844
StyD4I	CCNGG	8 cut(s)	62, 423, 464, 829, 1473, 1591, 2099, 2128
StyI	CCWWGG	1 cut(s)	429
TaaI	ACNGT	2 cut(s)	1241, 1282
TaiI	ACGT	2 cut(s)	1537, 2028
TaqI	TCGA	9 cut(s)	18, 87, 317, 695, 1410, 2043, 2136, 2201, 2226
TatI	WGTACW	2 cut(s)	537, 1241
TauI	GCSGC	5 cut(s)	38, 41, 62, 206, 1619
TfiI	GAWTC	2 cut(s)	447, 1412
TscAI	CASTG	3 cut(s)	351, 1122, 1196
TseFI	GTSAC	1 cut(s)	346
Tsp45I	GTSAC	1 cut(s)	346
TspDTI	ATGAA	6 cut(s)	852, 927, 1304, 1506, 2009, 2222
TspGWI	ACGGA	3 cut(s)	1566, 1746, 1865
TspRI	CASTG	3 cut(s)	351, 1122, 1196
Van91I	CCANNNNNTGG	1 cut(s)	625
VneI	GTGCAC	1 cut(s)	1113
VpaK11BI	GGWCC	2 cut(s)	116, 480
VspI	ATTAAT	2 cut(s)	1286, 1403
XagI	CCTNNNNNAGG	3 cut(s)	53, 1025, 1268
XapI	RAATTY	1 cut(s)	553
XcmI	CCANNNNNNNNNTGG	1 cut(s)	364
XmiI	GTMKAC	1 cut(s)	1642
XspI	CTAG	2 cut(s)	870, 2069
Zsp2I	ATGCAT	3 cut(s)	1324, 1353, 2055

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.