Rorug05G0121100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000926
Physical Location & Seq
Reverse (-)
10654650 .. 10661148
6499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0121100.1

Sequence Viewer

Length: 2538 bp
ATGGCACTTGTTATGCACAAAGAAAAACACAACCAAATGGATTCAAGCAAGTATGTGAGGTACACACCAGAGCAAGTTGAGGCCTTGGAGAGGGTCTACTCTGAATGCCCAAAGCCTAGTTCTTTGAGAAGGCAGCAGCTGATTAGAGAGTGTCCTATTCTCTCTAACATTGAGCCGAAACAGATCAAAGTCTGGTTCCAGAATCGAAGATGCCGGGAGAAGCAGAGGAAGGAATCTTCTCGACTCACAACAGTGAATAGAAAGCTGTCTGCCATGAATAAGCTGTTAATGGAAGAAAATGACCGCTTACAGAAGCAAGTCTCTCATTTGGTTTATGAGAATGGATTCATGAAGCAGCAACTGCATACCGCATCTGGAACGACCACAGACAATAGCTGCGAGTCTGTGGTCATGAATGGTCAGCACCAACAACAGCACAACCCAACTCCCCAGCATCCTCAAAGGGATGCTAACAACCCAGCTGGTCTTCTAGCAATTGCGGAGGAGACCTTGGCAGAGTTCCTTTCCAAGGCTACCGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTCCAGTGGGGTAGCAGCACGAGCTTGCGGTCTTGTGAGCCTAGAGCCCACAAAGGTCGCCGAAATCCTCAAAGATCGTCCATCGTGGTTTCGGGATTGCCGTTGCCTTGATGTACTGAGTATAATTCCTGCGGGAAATGGTGGAACAATTGAGCTCTTATACATGCAGACTTATGCACCTACAACACTAGCTGCAGCTCGTGACTTTTGGACGCTAAGATATACTACAACATTGGAAGATGGGAGTCTTGTGGTATGCGAGAGGTCATTGACTTCTTCTACCGGCGGCCCAACAGGGCCCCCATCTCCAAGTTTTGTGAGAGCTGAGATGCTTCCTAGTGGCTTTCTTATCCGACCGTGTGAGGGTGGCGGCTCCATTATTCACATCGTTGATCATGTCGATTTAGATGCCTGGAGCGTTCCTGAAGTTCTCAGGTCACTTTATGAATCATCCAAAATCATTGCTCAAAAAATGACTGTTGCAGCCCTGCGTCACATAAGGCAGATAGCTCAAGAGGCCACTGGAGAAATTCAGTATGCTGGGGGTCGCCAGCCTGCTGTATTGAGAACTTTTAGTCAAAGGCTCTGCAGAGGTTTCAATGATGCTGTTAATGGATTTGCGGATGATGGTTGGTCCCTTTTGGGTAGTGATGGTGCGGAGGATGTGACCATTGCCATAAACTCGTCTCCAAACAAGTTTCTTGGTTCTCAGTATAATGCATCCATTTTCCCATCTTTTGGAGGAGGGGTGCTGTGTGCCAAGGCATCAATGTTGCTGCAGAGTGTTCCTCCTGCTTTGCTTGTTCGTTTTCTGAGGGAGCACCGATCAGAGTGGGCCGACTATGGGGTTGATGCATACTCTGCTGCATGTCTTAAAGCTAGCCCTTACGCAGTTCCTTGTGCAAGACCAGGTGGCTTCCCAAGCAGCCAGGTTATTTTACCTCTTGCACCCACTGTGGAGAATGAGGAGTTCTTAGAGGTTGTTCGGCTAGAGGGTCATGCTTACTCTCCTGAAGATGTTGCTTTGGCACGAGATATGTTCTTATTACAGTTGTGCAGCGGGGTTGATGAAAATGCAGTTGGTGCCTGTGCTCAGCTTGTGTTTGCACCTATAGATGAATCATTTGCTGATGATGCTCCTTTGTTGCCATCTGGTTTTCATGTCATACCGTTGGATGCCAAAACAGACGGACCAACTGCAAATCGCACATTGGATTTGGCCTCTACGCTTGAAGTAGGAGCCAGCAGTGCTCGCCGAGTTAACGAGGGTGATGCAAATAGTTACAACCTTAGGTCAGTTCTGACCATAGCCTTCCAATTTACATTTGAGAATCACCTGCGCGACAGTGTAGCAGCTATGGCTCGCCAGTATGTGCGTGGTGTTGTAAGCTCTGTTCAAAGGGTAGCTATGGCTATTGCCCCTTCTCGTCTCAGCTCCCAAATGGGACCAAAATCCCTTCCTGGTTCTCCTGAGGCTCAGACTTTGGCACGCTGGATTTTCCGAAGCTACAGGATCCACACTGGGGCAGAGCTCTTTCGACTTGATTCCCCATCTGGTGATGCTGTTCTGAAGCAGCTTTGGGACCATCCTGATGCAATCATGTGTTGCTCTGTGAAAACAAATGCATCCCCAGTGTTCACTTTTGCAAACCAGGCCGGACTTGACATGCTTGAAACAACTCTTGTGGCCCTCCAAGACATCATGCTTGACAAGATTCTGGATGAAGCTGGACGGAAAGTTCTCTGCTCAGAGTTCTCCAAAATCATGCACCAGGGGTTTGCATATCTGCCAGCGGGAATATGTGCTTCTAGCATGGGCAGACCGGTATCTTATGAGCAGGCTATTGCTTGGAAAGTTGTTAACGATGATGATTCCAACCATTGCCTGGCGCTCATGTTCACAAACTGGTCTTTCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

845

Amino Acids

92.55

Weight (kDa)

6.03

Isoelectric Point (pI)

52.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 17 - 75 1.4e-15 Homeodomain
START PF01852 166 - 373 9.8e-52 START domain
MEKHLA PF08670 700 - 844 1.4e-45 MEKHLA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1962
Acc36I ACCTGC 1 cut(s) 1962
AccB1I GGYRCC 1 cut(s) 1700
AccB7I CCANNNNNTGG 2 cut(s) 1355, 2503
AccI GTMKAC 2 cut(s) 96, 549
AccII CGCG 1 cut(s) 1959
AccIII TCCGGA 1 cut(s) 583
AclWI GGATC 2 cut(s) 2125, 2138
AcsI RAATTY 1 cut(s) 1146
AcuI CTGAAG 3 cut(s) 1062, 1650, 2207
AfaI GTAC 2 cut(s) 62, 732
AfiI CCNNNNNNNGG 7 cut(s) 90, 529, 980, 1355, 1461, 2140, 2503
AgeI ACCGGT 1 cut(s) 2440
AgsI TTSAA 5 cut(s) 45, 1216, 1850, 2015, 2291
AjnI CCWGG 8 cut(s) 577, 1028, 1525, 1545, 2077, 2268, 2388, 2502
AjuI GAANNNNNNNTTGG 4 cut(s) 103, 135, 1680, 1712
AleI CACNNNNGTG 1 cut(s) 251
AloI GAACNNNNNNTCC 2 cut(s) 2340, 2372
Alw21I GWGCWC 5 cut(s) 774, 1440, 1711, 1870, 2151
Alw26I GTCTC 4 cut(s) 325, 500, 1308, 2051
AlwI GGATC 2 cut(s) 2125, 2138
AlwNI CAGNNNCTG 2 cut(s) 139, 361
Aor13HI TCCGGA 1 cut(s) 583
AoxI GGCC 8 cut(s) 81, 904, 914, 1134, 1452, 1836, 2271, 2304
ApaI GGGCCC 1 cut(s) 918
ApoI RAATTY 1 cut(s) 1146
AsiGI ACCGGT 1 cut(s) 2440
Asp700I GAANNNNTTC 1 cut(s) 344
AspLEI GCGC 2 cut(s) 1959, 2509
AsuC2I CCSGG 1 cut(s) 215
AsuHPI GGTGA 3 cut(s) 1898, 1943, 2186
AsuNHI GCTAGC 1 cut(s) 1496
AvaII GGWCC 6 cut(s) 556, 581, 1251, 1808, 2063, 2200
AxyI CCTNAGG 2 cut(s) 1907, 2088
BaeGI GKGCMC 1 cut(s) 918
BamHI GGATCC 1 cut(s) 2130
BanI GGYRCC 1 cut(s) 1700
BanII GRGCYC 4 cut(s) 666, 774, 918, 2151
BauI CACGAG 3 cut(s) 636, 816, 1647
BbsI GAAGAC 1 cut(s) 479
Bbv12I GWGCWC 5 cut(s) 774, 1440, 1711, 1870, 2151
BccI CCATC 9 cut(s) 706, 851, 928, 1238, 1262, 1357, 1774, 2176, 2211
BceAI ACGGC 1 cut(s) 702
BcgI CGANNNNNNTGC 4 cut(s) 1007, 1041, 1871, 1905
BciT130I CCWGG 8 cut(s) 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
BclI TGATCA 1 cut(s) 1009
BcnI CCSGG 1 cut(s) 215
BcoDI GTCTC 4 cut(s) 325, 500, 1308, 2051
BfaI CTAG 8 cut(s) 117, 491, 659, 806, 954, 1497, 1607, 2427
BfmI CTRYAG 5 cut(s) 810, 1204, 1394, 1728, 2125
BfoI RGCGCY 1 cut(s) 2510
BfuAI ACCTGC 1 cut(s) 1962
BlpI GCTNAGC 1 cut(s) 1710
Bme1390I CCNGG 9 cut(s) 215, 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
Bme18I GGWCC 6 cut(s) 556, 581, 1251, 1808, 2063, 2200
BmrFI CCNGG 9 cut(s) 215, 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
BmrI ACTGGG 3 cut(s) 562, 2148, 2243
BmtI GCTAGC 1 cut(s) 1500
BmuI ACTGGG 3 cut(s) 562, 2148, 2243
BpiI GAAGAC 1 cut(s) 479
BplI GAGNNNNNCTC 2 cut(s) 1390, 1422
BpmI CTGGAG 3 cut(s) 604, 1051, 1161
Bpu1102I GCTNAGC 1 cut(s) 1710
BpuEI CTTGAG 1 cut(s) 1113
BpuMI CCSGG 1 cut(s) 215
BsaI GGTCTC 1 cut(s) 500
BsaJI CCNNGG 5 cut(s) 84, 510, 528, 1377, 2389
BsaWI WCCGGW 3 cut(s) 536, 583, 2440
BsaXI ACNNNNNCTCC 2 cut(s) 1350, 1380
Bsc4I CCNNNNNNNGG 7 cut(s) 90, 529, 980, 1355, 1461, 2140, 2503
Bse118I RCCGGY 2 cut(s) 899, 2440
Bse1I ACTGG 7 cut(s) 557, 621, 1144, 1984, 2143, 2249, 2528
Bse21I CCTNAGG 2 cut(s) 1907, 2088
Bse3DI GCAATG 3 cut(s) 1077, 1287, 2497
BseAI TCCGGA 1 cut(s) 583
BseBI CCWGG 8 cut(s) 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
BseDI CCNNGG 5 cut(s) 84, 510, 528, 1377, 2389
BseLI CCNNNNNNNGG 7 cut(s) 90, 529, 980, 1355, 1461, 2140, 2503
BseMI GCAATG 3 cut(s) 1077, 1287, 2497
BseNI ACTGG 7 cut(s) 557, 621, 1144, 1984, 2143, 2249, 2528
BseRI GAGGAG 3 cut(s) 518, 1374, 1598
BseSI GKGCMC 1 cut(s) 918
BseYI CCCAGC 3 cut(s) 450, 478, 1157
BsgI GTGCAG 1 cut(s) 1693
Bsh1236I CGCG 1 cut(s) 1959
Bsh1285I CGRYCG 1 cut(s) 974
BshFI GGCC 8 cut(s) 83, 906, 916, 1136, 1454, 1838, 2273, 2306
BshNI GGYRCC 1 cut(s) 1700
BshTI ACCGGT 1 cut(s) 2440
BsiEI CGRYCG 1 cut(s) 974
BsiHKAI GWGCWC 5 cut(s) 774, 1440, 1711, 1870, 2151
BsiSI CCGG 6 cut(s) 214, 537, 584, 900, 2274, 2441
BslFI GGGAC 3 cut(s) 1237, 2076, 2213
BslI CCNNNNNNNGG 7 cut(s) 90, 529, 980, 1355, 1461, 2140, 2503
BsmAI GTCTC 4 cut(s) 325, 500, 1308, 2051
BsmBI CGTCTC 2 cut(s) 1308, 2051
BsmFI GGGAC 3 cut(s) 1237, 2076, 2213
BsmI GAATGC 1 cut(s) 110
BsnI GGCC 8 cut(s) 83, 906, 916, 1136, 1454, 1838, 2273, 2306
Bso31I GGTCTC 1 cut(s) 500
Bsp120I GGGCCC 1 cut(s) 914
Bsp1286I GDGCHC 7 cut(s) 666, 774, 918, 1440, 1711, 1870, 2151
Bsp13I TCCGGA 1 cut(s) 583
Bsp143I GATC 5 cut(s) 183, 691, 1009, 1442, 2130
Bsp1720I GCTNAGC 1 cut(s) 1710
BspANI GGCC 8 cut(s) 83, 906, 916, 1136, 1454, 1838, 2273, 2306
BspEI TCCGGA 1 cut(s) 583
BspFNI CGCG 1 cut(s) 1959
BspHI TCATGA 2 cut(s) 348, 411
BspMAI CTGCAG 3 cut(s) 814, 1208, 1398
BspMI ACCTGC 1 cut(s) 1962
BspOI GCTAGC 1 cut(s) 1500
BspPI GGATC 2 cut(s) 2125, 2138
BspT107I GGYRCC 1 cut(s) 1700
BspTNI GGTCTC 1 cut(s) 500
BsrDI GCAATG 3 cut(s) 1077, 1287, 2497
BsrFI RCCGGY 2 cut(s) 899, 2440
BsrI ACTGG 7 cut(s) 557, 621, 1144, 1984, 2143, 2249, 2528
BssAI RCCGGY 2 cut(s) 899, 2440
BssECI CCNNGG 5 cut(s) 84, 510, 528, 1377, 2389
BssMI GATC 5 cut(s) 183, 691, 1009, 1442, 2130
BssSI CACGAG 3 cut(s) 636, 816, 1647
BssT1I CCWWGG 4 cut(s) 84, 510, 528, 1377
Bst2BI CACGAG 3 cut(s) 636, 816, 1647
Bst2UI CCWGG 8 cut(s) 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
Bst4CI ACNGT 7 cut(s) 253, 975, 1096, 1573, 1668, 1788, 1964
BstAPI GCANNNNNTGC 3 cut(s) 361, 1478, 1700
BstENI CCTNNNNNAGG 2 cut(s) 88, 527
BstFNI CGCG 1 cut(s) 1959
BstH2I RGCGCY 1 cut(s) 2510
BstHHI GCGC 2 cut(s) 1959, 2509
BstKTI GATC 5 cut(s) 186, 694, 1012, 1445, 2133
BstMAI GTCTC 4 cut(s) 325, 500, 1308, 2051
BstMBI GATC 5 cut(s) 183, 691, 1009, 1442, 2130
BstMCI CGRYCG 1 cut(s) 974
BstNI CCWGG 8 cut(s) 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
BstNSI RCATGY 3 cut(s) 784, 1488, 2287
BstSCI CCNGG 9 cut(s) 213, 577, 1028, 1525, 1545, 2077, 2268, 2388, 2502
BstSFI CTRYAG 5 cut(s) 810, 1204, 1394, 1728, 2125
BstSLI GKGCMC 1 cut(s) 918
BstUI CGCG 1 cut(s) 1959
BstV2I GAAGAC 1 cut(s) 479
BstX2I RGATCY 1 cut(s) 2130
BstXI CCANNNNNNTGG 1 cut(s) 566
BstYI RGATCY 1 cut(s) 2130
Bsu36I CCTNAGG 2 cut(s) 1907, 2088
BsuRI GGCC 8 cut(s) 83, 906, 916, 1136, 1454, 1838, 2273, 2306
BtsI GCAGTG 1 cut(s) 1870
BtsIMutI CAGTG 8 cut(s) 258, 628, 1137, 1569, 1870, 1969, 2136, 2256
BveI ACCTGC 1 cut(s) 1962
CaiI CAGNNNCTG 2 cut(s) 139, 361
CciI TCATGA 2 cut(s) 348, 411
CfoI GCGC 2 cut(s) 1959, 2509
Cfr10I RCCGGY 2 cut(s) 899, 2440
CseI GACGC 2 cut(s) 838, 1097
CsiI ACCWGGT 1 cut(s) 1525
Csp6I GTAC 2 cut(s) 61, 731
CspAI ACCGGT 1 cut(s) 2440
CspCI CAANNNNNGTGG 4 cut(s) 604, 639, 2283, 2318
CviQI GTAC 2 cut(s) 61, 731
DpnI GATC 5 cut(s) 185, 693, 1011, 1444, 2132
DpnII GATC 5 cut(s) 183, 691, 1009, 1442, 2130
Ecl136II GAGCTC 2 cut(s) 772, 2149
Eco130I CCWWGG 4 cut(s) 84, 510, 528, 1377
Eco147I AGGCCT 1 cut(s) 83
Eco24I GRGCYC 4 cut(s) 666, 774, 918, 2151
Eco31I GGTCTC 1 cut(s) 500
Eco47I GGWCC 6 cut(s) 556, 581, 1251, 1808, 2063, 2200
Eco53kI GAGCTC 2 cut(s) 772, 2149
Eco57I CTGAAG 3 cut(s) 1062, 1650, 2207
Eco81I CCTNAGG 2 cut(s) 1907, 2088
EcoICRI GAGCTC 2 cut(s) 772, 2149
EcoNI CCTNNNNNAGG 2 cut(s) 88, 527
EcoO109I RGGNCCY 2 cut(s) 914, 915
EcoRII CCWGG 8 cut(s) 577, 1028, 1525, 1545, 2077, 2268, 2388, 2502
EcoT14I CCWWGG 4 cut(s) 84, 510, 528, 1377
EcoT22I ATGCAT 3 cut(s) 1339, 1474, 2245
EcoT38I GRGCYC 4 cut(s) 666, 774, 918, 2151
ErhI CCWWGG 4 cut(s) 84, 510, 528, 1377
Esp3I CGTCTC 2 cut(s) 1308, 2051
FaqI GGGAC 3 cut(s) 1237, 2076, 2213
FauI CCCGC 4 cut(s) 620, 742, 1670, 2404
FbaI TGATCA 1 cut(s) 1009
FblI GTMKAC 2 cut(s) 96, 549
FriOI GRGCYC 4 cut(s) 666, 774, 918, 2151
FspBI CTAG 8 cut(s) 117, 491, 659, 806, 954, 1497, 1607, 2427
GlaI GCGC 2 cut(s) 1958, 2508
GsaI CCCAGC 3 cut(s) 454, 482, 1161
GsuI CTGGAG 3 cut(s) 604, 1051, 1161
HaeII RGCGCY 1 cut(s) 2510
HaeIII GGCC 8 cut(s) 83, 906, 916, 1136, 1454, 1838, 2273, 2306
HapII CCGG 6 cut(s) 214, 537, 584, 900, 2274, 2441
HgaI GACGC 2 cut(s) 838, 1097
HhaI GCGC 2 cut(s) 1959, 2509
Hin6I GCGC 2 cut(s) 1957, 2507
HinP1I GCGC 2 cut(s) 1957, 2507
HincII GTYRAC 3 cut(s) 550, 1879, 2479
HindII GTYRAC 3 cut(s) 550, 1879, 2479
HpaI GTTAAC 2 cut(s) 1879, 2479
HpaII CCGG 6 cut(s) 214, 537, 584, 900, 2274, 2441
HphI GGTGA 3 cut(s) 1898, 1943, 2186
Hpy166II GTNNAC 7 cut(s) 63, 97, 550, 1879, 2256, 2479, 2517
Hpy188I TCNGA 9 cut(s) 103, 971, 1431, 1447, 1920, 2097, 2120, 2187, 2368
Hpy8I GTNNAC 7 cut(s) 63, 97, 550, 1879, 2256, 2479, 2517
HpyAV CCTTC 5 cut(s) 123, 223, 1939, 2049, 2084
HpyCH4III ACNGT 7 cut(s) 253, 975, 1096, 1573, 1668, 1788, 1964
HspAI GCGC 2 cut(s) 1957, 2507
Kpn2I TCCGGA 1 cut(s) 583
Ksp22I TGATCA 1 cut(s) 1009
KspAI GTTAAC 2 cut(s) 1879, 2479
Kzo9I GATC 5 cut(s) 183, 691, 1009, 1442, 2130
LmnI GCTCC 6 cut(s) 995, 1032, 1435, 1759, 1856, 2057
MabI ACCWGGT 1 cut(s) 1525
MaeI CTAG 8 cut(s) 117, 491, 659, 806, 954, 1497, 1607, 2427
MaeIII GTNAC 5 cut(s) 818, 1053, 1109, 1282, 1898
MalI GATC 5 cut(s) 185, 693, 1011, 1444, 2132
MboI GATC 5 cut(s) 183, 691, 1009, 1442, 2130
MboII GAAGA 7 cut(s) 219, 228, 305, 479, 866, 885, 1643
MfeI CAATTG 2 cut(s) 495, 765
MflI RGATCY 1 cut(s) 2130
MhlI GDGCHC 7 cut(s) 666, 774, 918, 1440, 1711, 1870, 2151
MluCI AATT 5 cut(s) 495, 741, 765, 1146, 1934
MlyI GAGTC 3 cut(s) 237, 410, 871
MmeI TCCRAC 3 cut(s) 994, 1770, 2517
Mph1103I ATGCAT 3 cut(s) 1339, 1474, 2245
MroI TCCGGA 1 cut(s) 583
MroXI GAANNNNTTC 1 cut(s) 344
MseI TTAA 5 cut(s) 287, 1227, 1491, 1878, 2478
MslI CAYNNNNRTG 2 cut(s) 251, 2208
MspA1I CMGCKG 4 cut(s) 139, 482, 1677, 2411
MspI CCGG 6 cut(s) 214, 537, 584, 900, 2274, 2441
MspR9I CCNGG 9 cut(s) 215, 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
MunI CAATTG 2 cut(s) 495, 765
Mva1269I GAATGC 1 cut(s) 110
MvaI CCWGG 8 cut(s) 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
MvnI CGCG 1 cut(s) 1959
NciI CCSGG 1 cut(s) 215
NdeII GATC 5 cut(s) 183, 691, 1009, 1442, 2130
NheI GCTAGC 1 cut(s) 1496
NmeAIII GCCGAG 1 cut(s) 1898
NmuCI GTSAC 4 cut(s) 818, 1053, 1109, 1282
NsiI ATGCAT 3 cut(s) 1339, 1474, 2245
NspI RCATGY 3 cut(s) 784, 1488, 2287
OliI CACNNNNGTG 1 cut(s) 251
PagI TCATGA 2 cut(s) 348, 411
PaqCI CACCTGC 1 cut(s) 1962
PceI AGGCCT 1 cut(s) 83
PcsI WCGNNNNNNNCGW 1 cut(s) 715
PctI GAATGC 1 cut(s) 110
PdmI GAANNNNTTC 1 cut(s) 344
PflFI GACNNNGTC 1 cut(s) 554
PflMI CCANNNNNTGG 2 cut(s) 1355, 2503
PinAI ACCGGT 1 cut(s) 2440
PleI GAGTC 3 cut(s) 237, 409, 870
PpsI GAGTC 3 cut(s) 237, 409, 870
Psp124BI GAGCTC 2 cut(s) 774, 2151
Psp6I CCWGG 8 cut(s) 577, 1028, 1525, 1545, 2077, 2268, 2388, 2502
PspFI CCCAGC 3 cut(s) 450, 478, 1157
PspGI CCWGG 8 cut(s) 577, 1028, 1525, 1545, 2077, 2268, 2388, 2502
PspOMI GGGCCC 1 cut(s) 914
PsrI GAACNNNNNNTAC 2 cut(s) 1995, 2027
PstI CTGCAG 3 cut(s) 814, 1208, 1398
PstNI CAGNNNCTG 2 cut(s) 139, 361
PsuI RGATCY 1 cut(s) 2130
PsyI GACNNNGTC 1 cut(s) 554
PvuII CAGCTG 2 cut(s) 139, 482
RsaI GTAC 2 cut(s) 62, 732
RsaNI GTAC 2 cut(s) 61, 731
RseI CAYNNNNRTG 2 cut(s) 251, 2208
SacI GAGCTC 2 cut(s) 774, 2151
SalI GTCGAC 1 cut(s) 548
SaqAI TTAA 5 cut(s) 287, 1227, 1491, 1878, 2478
Sau3AI GATC 5 cut(s) 183, 691, 1009, 1442, 2130
SchI GAGTC 3 cut(s) 237, 410, 871
ScrFI CCNGG 9 cut(s) 215, 579, 1030, 1527, 1547, 2079, 2270, 2390, 2504
SduI GDGCHC 7 cut(s) 666, 774, 918, 1440, 1711, 1870, 2151
SexAI ACCWGGT 1 cut(s) 1525
SfcI CTRYAG 5 cut(s) 810, 1204, 1394, 1728, 2125
SinI GGWCC 6 cut(s) 556, 581, 1251, 1808, 2063, 2200
SmiMI CAYNNNNRTG 2 cut(s) 251, 2208
SmlI CTYRAG 1 cut(s) 1128
SmoI CTYRAG 1 cut(s) 1128
Sse9I AATT 5 cut(s) 495, 741, 765, 1146, 1934
SseBI AGGCCT 1 cut(s) 83
SspMI CTAG 8 cut(s) 117, 491, 659, 806, 954, 1497, 1607, 2427
SstI GAGCTC 2 cut(s) 774, 2151
StuI AGGCCT 1 cut(s) 83
StyD4I CCNGG 9 cut(s) 213, 577, 1028, 1525, 1545, 2077, 2268, 2388, 2502
StyI CCWWGG 4 cut(s) 84, 510, 528, 1377
TaaI ACNGT 7 cut(s) 253, 975, 1096, 1573, 1668, 1788, 1964
TaqI TCGA 5 cut(s) 205, 241, 549, 1017, 2155
TasI AATT 5 cut(s) 495, 741, 765, 1146, 1934
TatI WGTACW 1 cut(s) 730
TauI GCSGC 2 cut(s) 906, 990
Tru1I TTAA 5 cut(s) 287, 1227, 1491, 1878, 2478
Tru9I TTAA 5 cut(s) 287, 1227, 1491, 1878, 2478
TscAI CASTG 8 cut(s) 258, 628, 1144, 1576, 1870, 1969, 2143, 2256
TseFI GTSAC 4 cut(s) 818, 1053, 1109, 1282
Tsp45I GTSAC 4 cut(s) 818, 1053, 1109, 1282
TspGWI ACGGA 2 cut(s) 1821, 2365
TspRI CASTG 8 cut(s) 258, 628, 1144, 1576, 1870, 1969, 2143, 2256
Tth111I GACNNNGTC 1 cut(s) 554
Van91I CCANNNNNTGG 2 cut(s) 1355, 2503
VpaK11BI GGWCC 6 cut(s) 556, 581, 1251, 1808, 2063, 2200
XagI CCTNNNNNAGG 2 cut(s) 88, 527
XapI RAATTY 1 cut(s) 1146
XceI RCATGY 3 cut(s) 784, 1488, 2287
XcmI CCANNNNNNNNNTGG 2 cut(s) 1991, 2500
XmiI GTMKAC 2 cut(s) 96, 549
XmnI GAANNNNTTC 1 cut(s) 344
XspI CTAG 8 cut(s) 117, 491, 659, 806, 954, 1497, 1607, 2427
Zsp2I ATGCAT 3 cut(s) 1339, 1474, 2245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.