RchiOBHm_Chr5g0030881

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000926
Physical Location & Seq
Reverse (-)
24537957 .. 24541706
3750 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31017

Sequence Viewer

Length: 1782 bp
ATGGATCCCTATTATGAACAAAGACTCAGAGACGAAGTCATTTACCTCCACTCTCTCTGGCACCAAGGTCCCCCTAATCGCCGAAACCCCATTCCCATTCCCAATTCCACAATCCGAGCCACCCCAATTGGCAGAAAACCCCAATTGCCGTACCCGATCGCCGCCCAAGAAGGCCCCACCACCAAGAGGAAGGCAAGAACCGAAATTGAATTGCCCAGCAGCAACAAGAAGCCCTCGCAACCCGACCCGCGTTGGGAATGCCCGGGTCCGGCCTCGAACGATGACTCAACCTCTGAGTGGCCATCATCTGGGTGGCCAGTGACTTCAGCCAAGCTCAATTTGGCTCCGGCGTCGGCGGAAGAGCAGTTGAGGCACCACGCACTTCGGTTACACAACCGGGCCTTGGAGGCCTGCGGCGGATTCTTTAAGGGCAATGCCGGGTCGGGTAGTGGGTCCGAGAGTGAGGAGGAAGAAGAGGATTGCAAGGTTGGAGATGAGGAGAATGAGGAGTACAAGTTTTTGTTGAATTTGTTTGTGGAGGAGAGTGGGTTGAGGAGTTATTACGAGGGGAATTGGGATAGTGGTGAGTTCCATTGCTTGGTGTGTGGTGGGTTGGGGAAGACGAAAAAGATCAAGGGTTGTGTCGGGCTTGTTCACCACGCGGTTTCGATAAGCAAGACGAAGAAGAAGAGAGCTCATAGGGCTTTTGCTCAGGTTGTGTGTAGGGTTTTAGGGTGGGATTTTGACCGGCTGCCCATTGTTGTGCTCAAAGGCGAAAGGCTCAGTTTTTATTTGGCGAAACCGGGCGATGAACGGGGTGAGATTGAGGTAAATGCTGGTGCTAGTGAGGCTGTTTCGGGTGCTGTTAAAGACAATGTGGGAGATGAAAGGGATGGTAATGCAGAGTCAGGTGAAAAGGAAGCATCTAATGGAGACCTAATTATTTGTCAGAAATCTTTGAAAGATGATGATGCAAATCAATGCAAAGAAACCCTTAATAAGGGGATATCAGAAATCAAAGAAGAGAAAGAAGAGGCAATGAATACGCGGAGTGAGCCTGAGTTAAATGTTGACCAGTTGGATAGTGCACTGAAAGACAATGTGGCAGCTGAAACTGATGCTCCTGCTGAATCTAGTGAAAAGGAGGCATTTGATGATCATCAGTGCAATGGTAAAGAACCAATCATCTGTCAGAGCTCTTTGAAAGATGATGGTACAGAGAAAAGCAGAGAAAGCCTTGATGAGGGAAAGACAGTATTAATAAAGGAAGCAATTGGAGAAGAAGCAAAGGATGCATTGGGTGAGCCTGAGGTACGTGCTGGTTCTTGTGAGGGTGTTTTTTGTGTTGTTAAAGACAATGTGGCAGCCGAAAATGATGCCAATGCTGAATTGGGTGTAAAAGAGGTATTCGATGATCATCAGATTAACAGTGAAAATAAAATGATTTGTCAGAACTTGTTGAAAGATGATGGTACAACAGAAAACACAGAAGCCCTCAACAAGGGAATATCAGAAGTCGAAGCAAACAAAGAAGATGGAGTGGATAAAGTGGTTGAAGTTCCGGAAAATGGTGATGATTACAAGCATGATTCAGTTGTTTCCAAAGAAACATTGGATACTATCAGTGGATATACTGGTGAAATAGGGTCAAAGGTGGAACTTGAGGTAGCCTTAGGTGATGGAACACCAATGGCATGTGAGTTGCAGGCTGAACCTGAGAAAAATGTGGATGGTCCCAATGATGATTTAAATGTCTTTTTGGAGAATTTAGAACCCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

593

Amino Acids

64.85

Weight (kDa)

4.64

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 60, 372
AccB7I CCANNNNNTGG 2 cut(s) 308, 598
AccII CGCG 3 cut(s) 250, 662, 1048
AccIII TCCGGA 1 cut(s) 1561
AciI CCGC 7 cut(s) 162, 248, 356, 414, 417, 662, 1048
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 2 cut(s) 299, 314
AcsI RAATTY 2 cut(s) 526, 1765
AcuI CTGAAG 1 cut(s) 309
AcyI GRCGYC 1 cut(s) 350
AfaI GTAC 5 cut(s) 152, 512, 1216, 1314, 1474
AgsI TTSAA 6 cut(s) 209, 526, 961, 1204, 1462, 1556
AluBI AGCT 4 cut(s) 334, 695, 1109, 1197
AluI AGCT 4 cut(s) 334, 695, 1109, 1197
Alw21I GWGCWC 4 cut(s) 697, 768, 1090, 1199
Alw26I GTCTC 2 cut(s) 24, 927
Alw44I GTGCAC 1 cut(s) 1086
AlwI GGATC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 262
Aor13HI TCCGGA 1 cut(s) 1561
AoxI GGCC 6 cut(s) 172, 270, 299, 314, 399, 408
ApaLI GTGCAC 1 cut(s) 1086
ApeKI GCWGC 4 cut(s) 219, 751, 1106, 1364
ApoI RAATTY 2 cut(s) 526, 1765
AseI ATTAAT 1 cut(s) 1259
AspS9I GGNCC 6 cut(s) 68, 173, 266, 399, 453, 1733
AsuC2I CCSGG 5 cut(s) 263, 264, 398, 439, 804
AsuHPI GGTGA 8 cut(s) 596, 647, 830, 923, 1313, 1583, 1649, 1688
AvaI CYCGRG 1 cut(s) 262
AvaII GGWCC 4 cut(s) 68, 266, 453, 1733
AxyI CCTNAGG 2 cut(s) 1308, 1672
BaeGI GKGCMC 1 cut(s) 1090
BalI TGGCCA 2 cut(s) 301, 316
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 2 cut(s) 60, 372
BanII GRGCYC 2 cut(s) 697, 1199
BbsI GAAGAC 1 cut(s) 626
Bbv12I GWGCWC 4 cut(s) 697, 768, 1090, 1199
BbvI GCAGC 4 cut(s) 231, 738, 1118, 1376
BccI CCATC 7 cut(s) 310, 887, 1205, 1463, 1529, 1673, 1724
BceAI ACGGC 1 cut(s) 133
BcgI CGANNNNNNTGC 2 cut(s) 1358, 1392
BciVI GTATCC 1 cut(s) 1609
BclI TGATCA 2 cut(s) 1156, 1414
BcnI CCSGG 5 cut(s) 263, 264, 398, 439, 804
BcoDI GTCTC 2 cut(s) 24, 927
BfaI CTAG 2 cut(s) 843, 1134
BfuI GTATCC 1 cut(s) 1609
BglI GCCNNNNNGGC 1 cut(s) 407
BisI GCNGC 6 cut(s) 162, 220, 415, 752, 1107, 1365
BlsI GCNGC 6 cut(s) 163, 221, 416, 753, 1108, 1366
Bme1390I CCNGG 5 cut(s) 263, 264, 398, 439, 804
Bme18I GGWCC 4 cut(s) 68, 266, 453, 1733
BmeT110I CYCGRG 1 cut(s) 262
BmgT120I GGNCC 6 cut(s) 68, 173, 266, 399, 453, 1733
BmiI GGNNCC 9 cut(s) 6, 62, 70, 175, 267, 345, 374, 454, 1735
BmrFI CCNGG 5 cut(s) 263, 264, 398, 439, 804
BmsI GCATC 5 cut(s) 932, 961, 1108, 1282, 1366
BpiI GAAGAC 1 cut(s) 626
Bpu10I CCTNAGC 1 cut(s) 711
BpuEI CTTGAG 1 cut(s) 1682
BpuMI CCSGG 5 cut(s) 263, 264, 398, 439, 804
BsaAI YACGTR 1 cut(s) 1316
BsaBI GATNNNNATC 3 cut(s) 975, 1158, 1416
BsaHI GRCGYC 1 cut(s) 350
BsaI GGTCTC 1 cut(s) 927
BsaJI CCNNGG 3 cut(s) 64, 262, 402
BsaWI WCCGGW 1 cut(s) 1561
BsaXI ACNNNNNCTCC 6 cut(s) 500, 530, 533, 563, 1105, 1135
Bse118I RCCGGY 1 cut(s) 747
Bse1I ACTGG 3 cut(s) 317, 1075, 1639
Bse21I CCTNAGG 2 cut(s) 1308, 1672
Bse3DI GCAATG 4 cut(s) 439, 592, 1044, 1174
Bse8I GATNNNNATC 3 cut(s) 975, 1158, 1416
BseAI TCCGGA 1 cut(s) 1561
BseDI CCNNGG 3 cut(s) 64, 262, 402
BseGI GGATG 3 cut(s) 898, 1297, 1735
BseJI GATNNNNATC 3 cut(s) 975, 1158, 1416
BseMI GCAATG 4 cut(s) 439, 592, 1044, 1174
BseMII CTCAG 7 cut(s) 40, 285, 725, 796, 1050, 1299, 1707
BseNI ACTGG 3 cut(s) 317, 1075, 1639
BseRI GAGGAG 5 cut(s) 479, 512, 521, 554, 568
BseSI GKGCMC 1 cut(s) 1090
BseXI GCAGC 4 cut(s) 231, 738, 1118, 1376
BseYI CCCAGC 1 cut(s) 215
Bsh1236I CGCG 3 cut(s) 250, 662, 1048
Bsh1285I CGRYCG 1 cut(s) 159
BshFI GGCC 6 cut(s) 174, 272, 301, 316, 401, 410
BshNI GGYRCC 2 cut(s) 60, 372
BsiEI CGRYCG 1 cut(s) 159
BsiHKAI GWGCWC 4 cut(s) 697, 768, 1090, 1199
BsiHKCI CYCGRG 1 cut(s) 262
BsiSI CCGG 8 cut(s) 263, 269, 347, 397, 438, 748, 803, 1562
BslFI GGGAC 2 cut(s) 54, 1719
BsmAI GTCTC 2 cut(s) 24, 927
BsmBI CGTCTC 1 cut(s) 24
BsmFI GGGAC 2 cut(s) 54, 1719
BsmI GAATGC 1 cut(s) 263
BsnI GGCC 6 cut(s) 174, 272, 301, 316, 401, 410
Bso31I GGTCTC 1 cut(s) 927
BsoBI CYCGRG 1 cut(s) 262
Bsp1286I GDGCHC 4 cut(s) 697, 768, 1090, 1199
Bsp13I TCCGGA 1 cut(s) 1561
Bsp143I GATC 5 cut(s) 4, 156, 630, 1156, 1414
BspACI CCGC 7 cut(s) 162, 248, 356, 414, 417, 662, 1048
BspANI GGCC 6 cut(s) 174, 272, 301, 316, 401, 410
BspCNI CTCAG 7 cut(s) 39, 286, 724, 795, 1051, 1300, 1708
BspEI TCCGGA 1 cut(s) 1561
BspFNI CGCG 3 cut(s) 250, 662, 1048
BspLI GGNNCC 9 cut(s) 6, 62, 70, 175, 267, 345, 374, 454, 1735
BspPI GGATC 1 cut(s) 12
BspQI GCTCTTC 1 cut(s) 354
BspT107I GGYRCC 2 cut(s) 60, 372
BspTNI GGTCTC 1 cut(s) 927
BsrDI GCAATG 4 cut(s) 439, 592, 1044, 1174
BsrFI RCCGGY 1 cut(s) 747
BsrI ACTGG 3 cut(s) 317, 1075, 1639
BssAI RCCGGY 1 cut(s) 747
BssECI CCNNGG 3 cut(s) 64, 262, 402
BssMI GATC 5 cut(s) 4, 156, 630, 1156, 1414
BssNI GRCGYC 1 cut(s) 350
BssT1I CCWWGG 2 cut(s) 64, 402
Bst4CI ACNGT 2 cut(s) 1255, 1430
Bst6I CTCTTC 5 cut(s) 354, 468, 683, 1017, 1026
BstACI GRCGYC 1 cut(s) 350
BstAPI GCANNNNNTGC 1 cut(s) 1292
BstBAI YACGTR 1 cut(s) 1316
BstC8I GCNNGC 2 cut(s) 412, 1707
BstDEI CTNAG 8 cut(s) 26, 294, 711, 782, 1059, 1308, 1672, 1716
BstENI CCTNNNNNAGG 3 cut(s) 998, 1241, 1499
BstF5I GGATG 3 cut(s) 898, 1297, 1735
BstFNI CGCG 3 cut(s) 250, 662, 1048
BstKTI GATC 5 cut(s) 7, 159, 633, 1159, 1417
BstMAI GTCTC 2 cut(s) 24, 927
BstMBI GATC 5 cut(s) 4, 156, 630, 1156, 1414
BstMCI CGRYCG 1 cut(s) 159
BstMWI GCNNNNNNNGC 7 cut(s) 370, 407, 701, 848, 1054, 1233, 1292
BstNSI RCATGY 1 cut(s) 1698
BstSCI CCNGG 5 cut(s) 261, 262, 396, 437, 802
BstSLI GKGCMC 1 cut(s) 1090
BstUI CGCG 3 cut(s) 250, 662, 1048
BstV1I GCAGC 4 cut(s) 231, 738, 1118, 1376
BstV2I GAAGAC 1 cut(s) 626
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
Bsu36I CCTNAGG 2 cut(s) 1308, 1672
BsuI GTATCC 1 cut(s) 1609
BsuRI GGCC 6 cut(s) 174, 272, 301, 316, 401, 410
BtgZI GCGATG 1 cut(s) 822
BtsCI GGATG 3 cut(s) 898, 1297, 1735
BtsIMutI CAGTG 5 cut(s) 324, 1088, 1169, 1435, 1630
Cac8I GCNNGC 2 cut(s) 412, 1707
Cfr10I RCCGGY 1 cut(s) 747
Cfr13I GGNCC 6 cut(s) 68, 173, 266, 399, 453, 1733
Cfr9I CCCGGG 1 cut(s) 262
CseI GACGC 1 cut(s) 339
Csp6I GTAC 5 cut(s) 151, 511, 1215, 1313, 1473
CspCI CAANNNNNGTGG 2 cut(s) 109, 144
CviAII CATG 2 cut(s) 1586, 1695
CviQI GTAC 5 cut(s) 151, 511, 1215, 1313, 1473
DdeI CTNAG 8 cut(s) 26, 294, 711, 782, 1059, 1308, 1672, 1716
DpnI GATC 5 cut(s) 6, 158, 632, 1158, 1416
DpnII GATC 5 cut(s) 4, 156, 630, 1156, 1414
DraI TTTAAA 1 cut(s) 1749
EaeI YGGCCR 2 cut(s) 299, 314
Eam1104I CTCTTC 5 cut(s) 354, 468, 683, 1017, 1026
EarI CTCTTC 5 cut(s) 354, 468, 683, 1017, 1026
EciI GGCGGA 2 cut(s) 371, 432
Ecl136II GAGCTC 2 cut(s) 695, 1197
Eco130I CCWWGG 2 cut(s) 64, 402
Eco147I AGGCCT 1 cut(s) 410
Eco24I GRGCYC 2 cut(s) 697, 1199
Eco31I GGTCTC 1 cut(s) 927
Eco32I GATATC 1 cut(s) 1008
Eco47I GGWCC 4 cut(s) 68, 266, 453, 1733
Eco53kI GAGCTC 2 cut(s) 695, 1197
Eco57I CTGAAG 1 cut(s) 309
Eco81I CCTNAGG 2 cut(s) 1308, 1672
Eco88I CYCGRG 1 cut(s) 262
EcoICRI GAGCTC 2 cut(s) 695, 1197
EcoNI CCTNNNNNAGG 3 cut(s) 998, 1241, 1499
EcoO109I RGGNCCY 2 cut(s) 68, 173
EcoRV GATATC 1 cut(s) 1008
EcoT14I CCWWGG 2 cut(s) 64, 402
EcoT22I ATGCAT 1 cut(s) 1297
EcoT38I GRGCYC 2 cut(s) 697, 1199
ErhI CCWWGG 2 cut(s) 64, 402
Esp3I CGTCTC 1 cut(s) 24
FaeI CATG 2 cut(s) 1589, 1698
FaiI YATR 5 cut(s) 15, 699, 1587, 1632, 1696
FalI AAGNNNNNCTT 2 cut(s) 978, 1010
FaqI GGGAC 2 cut(s) 54, 1719
FatI CATG 2 cut(s) 1585, 1694
FauI CCCGC 1 cut(s) 255
FbaI TGATCA 2 cut(s) 1156, 1414
Fnu4HI GCNGC 6 cut(s) 162, 220, 415, 752, 1107, 1365
FokI GGATG 3 cut(s) 905, 1304, 1742
FriOI GRGCYC 2 cut(s) 697, 1199
Fsp4HI GCNGC 6 cut(s) 162, 220, 415, 752, 1107, 1365
FspBI CTAG 2 cut(s) 843, 1134
GluI GCNGC 6 cut(s) 162, 220, 415, 752, 1107, 1365
GsaI CCCAGC 1 cut(s) 219
HaeIII GGCC 6 cut(s) 174, 272, 301, 316, 401, 410
HapII CCGG 8 cut(s) 263, 269, 347, 397, 438, 748, 803, 1562
HgaI GACGC 1 cut(s) 339
Hin1I GRCGYC 1 cut(s) 350
Hin1II CATG 2 cut(s) 1589, 1698
HincII GTYRAC 1 cut(s) 1072
HindII GTYRAC 1 cut(s) 1072
HinfI GANTC 6 cut(s) 24, 284, 420, 905, 1130, 1589
HpaII CCGG 8 cut(s) 263, 269, 347, 397, 438, 748, 803, 1562
HphI GGTGA 8 cut(s) 596, 647, 830, 923, 1313, 1583, 1649, 1688
Hpy166II GTNNAC 3 cut(s) 655, 1072, 1088
Hpy188III TCNNGA 1 cut(s) 1562
Hpy8I GTNNAC 3 cut(s) 655, 1072, 1088
Hpy99I CGWCG 1 cut(s) 355
HpyAV CCTTC 2 cut(s) 164, 184
HpyCH4III ACNGT 2 cut(s) 1255, 1430
HpyCH4IV ACGT 1 cut(s) 1315
HpyCH4V TGCA 8 cut(s) 483, 902, 974, 984, 1088, 1167, 1295, 1705
HpyF10VI GCNNNNNNNGC 7 cut(s) 370, 407, 701, 848, 1054, 1233, 1292
HpyF3I CTNAG 8 cut(s) 26, 294, 711, 782, 1059, 1308, 1672, 1716
HpySE526I ACGT 1 cut(s) 1315
Hsp92I GRCGYC 1 cut(s) 350
Hsp92II CATG 2 cut(s) 1589, 1698
Kpn2I TCCGGA 1 cut(s) 1561
Ksp22I TGATCA 2 cut(s) 1156, 1414
Kzo9I GATC 5 cut(s) 4, 156, 630, 1156, 1414
LguI GCTCTTC 1 cut(s) 354
LmnI GCTCC 2 cut(s) 349, 1126
Lsp1109I GCAGC 4 cut(s) 231, 738, 1118, 1376
LweI GCATC 5 cut(s) 932, 961, 1108, 1282, 1366
MaeI CTAG 2 cut(s) 843, 1134
MaeII ACGT 1 cut(s) 1315
MaeIII GTNAC 2 cut(s) 319, 387
MalI GATC 5 cut(s) 6, 158, 632, 1158, 1416
MboI GATC 5 cut(s) 4, 156, 630, 1156, 1414
MfeI CAATTG 3 cut(s) 126, 143, 1272
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 4 cut(s) 697, 768, 1090, 1199
MlsI TGGCCA 2 cut(s) 301, 316
MluNI TGGCCA 2 cut(s) 301, 316
MlyI GAGTC 3 cut(s) 18, 278, 914
MmeI TCCRAC 2 cut(s) 469, 1059
Mox20I TGGCCA 2 cut(s) 301, 316
Mph1103I ATGCAT 1 cut(s) 1297
MroI TCCGGA 1 cut(s) 1561
MscI TGGCCA 2 cut(s) 301, 316
MseI TTAA 8 cut(s) 426, 867, 996, 1064, 1259, 1350, 1425, 1748
MslI CAYNNNNRTG 2 cut(s) 310, 761
Msp20I TGGCCA 2 cut(s) 301, 316
MspA1I CMGCKG 1 cut(s) 1109
MspI CCGG 8 cut(s) 263, 269, 347, 397, 438, 748, 803, 1562
MspR9I CCNGG 5 cut(s) 263, 264, 398, 439, 804
MunI CAATTG 3 cut(s) 126, 143, 1272
Mva1269I GAATGC 1 cut(s) 263
MvnI CGCG 3 cut(s) 250, 662, 1048
MwoI GCNNNNNNNGC 7 cut(s) 370, 407, 701, 848, 1054, 1233, 1292
NciI CCSGG 5 cut(s) 263, 264, 398, 439, 804
NdeII GATC 5 cut(s) 4, 156, 630, 1156, 1414
NlaIII CATG 2 cut(s) 1589, 1698
NlaIV GGNNCC 9 cut(s) 6, 62, 70, 175, 267, 345, 374, 454, 1735
NmuCI GTSAC 1 cut(s) 319
NsiI ATGCAT 1 cut(s) 1297
NspI RCATGY 1 cut(s) 1698
PceI AGGCCT 1 cut(s) 410
PciSI GCTCTTC 1 cut(s) 354
PctI GAATGC 1 cut(s) 263
PfeI GAWTC 3 cut(s) 420, 1130, 1589
PflFI GACNNNGTC 1 cut(s) 35
PflMI CCANNNNNTGG 2 cut(s) 308, 598
PkrI GCNGC 6 cut(s) 163, 221, 416, 753, 1108, 1366
Ple19I CGATCG 1 cut(s) 159
PleI GAGTC 3 cut(s) 18, 278, 913
PpsI GAGTC 3 cut(s) 18, 278, 913
Ppu21I YACGTR 1 cut(s) 1316
PpuMI RGGWCCY 1 cut(s) 68
PshBI ATTAAT 1 cut(s) 1259
Psp124BI GAGCTC 2 cut(s) 697, 1199
Psp5II RGGWCCY 1 cut(s) 68
PspFI CCCAGC 1 cut(s) 215
PspN4I GGNNCC 9 cut(s) 6, 62, 70, 175, 267, 345, 374, 454, 1735
PspPI GGNCC 6 cut(s) 68, 173, 266, 399, 453, 1733
PspPPI RGGWCCY 1 cut(s) 68
PsuI RGATCY 1 cut(s) 4
PsyI GACNNNGTC 1 cut(s) 35
PvuI CGATCG 1 cut(s) 159
PvuII CAGCTG 1 cut(s) 1109
RsaI GTAC 5 cut(s) 152, 512, 1216, 1314, 1474
RsaNI GTAC 5 cut(s) 151, 511, 1215, 1313, 1473
RseI CAYNNNNRTG 2 cut(s) 310, 761
SacI GAGCTC 2 cut(s) 697, 1199
SapI GCTCTTC 1 cut(s) 354
SaqAI TTAA 8 cut(s) 426, 867, 996, 1064, 1259, 1350, 1425, 1748
SatI GCNGC 6 cut(s) 162, 220, 415, 752, 1107, 1365
Sau3AI GATC 5 cut(s) 4, 156, 630, 1156, 1414
Sau96I GGNCC 6 cut(s) 68, 173, 266, 399, 453, 1733
SchI GAGTC 3 cut(s) 18, 278, 914
ScrFI CCNGG 5 cut(s) 263, 264, 398, 439, 804
SduI GDGCHC 4 cut(s) 697, 768, 1090, 1199
SfaNI GCATC 5 cut(s) 932, 961, 1108, 1282, 1366
SfiI GGCCNNNNNGGCC 1 cut(s) 407
SinI GGWCC 4 cut(s) 68, 266, 453, 1733
SmaI CCCGGG 1 cut(s) 264
SmiI ATTTAAAT 1 cut(s) 1749
SmiMI CAYNNNNRTG 2 cut(s) 310, 761
SmlI CTYRAG 1 cut(s) 1661
SmoI CTYRAG 1 cut(s) 1661
SseBI AGGCCT 1 cut(s) 410
SsiI CCGC 7 cut(s) 162, 248, 356, 414, 417, 662, 1048
SspMI CTAG 2 cut(s) 843, 1134
SstI GAGCTC 2 cut(s) 697, 1199
StuI AGGCCT 1 cut(s) 410
StyD4I CCNGG 5 cut(s) 261, 262, 396, 437, 802
StyI CCWWGG 2 cut(s) 64, 402
SwaI ATTTAAAT 1 cut(s) 1749
TaaI ACNGT 2 cut(s) 1255, 1430
TaiI ACGT 1 cut(s) 1318
TaqI TCGA 4 cut(s) 275, 668, 1410, 1518
TatI WGTACW 1 cut(s) 510
TauI GCSGC 2 cut(s) 164, 417
TfiI GAWTC 3 cut(s) 420, 1130, 1589
Tru1I TTAA 8 cut(s) 426, 867, 996, 1064, 1259, 1350, 1425, 1748
Tru9I TTAA 8 cut(s) 426, 867, 996, 1064, 1259, 1350, 1425, 1748
TscAI CASTG 5 cut(s) 324, 1095, 1169, 1435, 1630
TseFI GTSAC 1 cut(s) 319
TseI GCWGC 4 cut(s) 219, 751, 1106, 1364
Tsp45I GTSAC 1 cut(s) 319
TspDTI ATGAA 4 cut(s) 30, 825, 900, 1055
TspMI CCCGGG 1 cut(s) 262
TspRI CASTG 5 cut(s) 324, 1095, 1169, 1435, 1630
Tth111I GACNNNGTC 1 cut(s) 35
Van91I CCANNNNNTGG 2 cut(s) 308, 598
VneI GTGCAC 1 cut(s) 1086
VpaK11BI GGWCC 4 cut(s) 68, 266, 453, 1733
VspI ATTAAT 1 cut(s) 1259
XagI CCTNNNNNAGG 3 cut(s) 998, 1241, 1499
XapI RAATTY 2 cut(s) 526, 1765
XceI RCATGY 1 cut(s) 1698
XcmI CCANNNNNNNNNTGG 4 cut(s) 309, 337, 1387, 1609
XmaI CCCGGG 1 cut(s) 262
XspI CTAG 2 cut(s) 843, 1134
Zsp2I ATGCAT 1 cut(s) 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.