Prupe.1G179000_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001515
Physical Location & Seq
Forward (+)
15409123 .. 15410875
1753 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G179000.1

Sequence Viewer

Length: 1464 bp
ATGGGATTTGAGCGTGAGCATATTGTGCTGCTTCCCATGATAGCTAAGGGTCATCTCATACCATTCTTGGCACTAGCAAAGCAAATGCAACAAAAAACAGGGTTTACCATCACCATTGCCACAACCCCACTCAACATTCAATACCTGCAAGCTACCATTTCCTCAACTTCGTCATCATCAAACACTCAATCACACTCCAACAATTTTGACATCAACTTGGCTGAGCTTCCATTCTGCAGCTCAGACTTTGGCTTACCCCCAGACACTGAGAACACAGAGAATTTGTCTATGAAACATATTGGAGATCTTTGTGCTGCAACAGTGAATCTTGAAGGTCCTGCTCGCCGCCTGATCTTGGATATCATTGAAAAAGAAGGCCGGCCGCCACTTTGTATTATCTCTGATATTTTCTTTGGATGGGCTACTCATCTTGCAAAGAGCTTAGGCACTGAGAATGTGACTTTCACAACATGCGGTGCTTATGGCAGTGCAGCCTTCATGTCCATTTGGCTTAACCTCCCACACCGTTCCACAGCTTTATGCGACGGCTACTTCACGCTACCCGGGTTTCCAGATCAGTCTCGTTTTCATATCTCTCAGCTGGACCACTATTTAAGAGCAGCAAAAGGTACAGATTTTTGGCCAAAATTTTACCAGTCCCAGCTTTCGCTTTCTACCAAATCTTTTGGTTGGTTGTGTAACACAGCTGAGGAAATTGAGCCACTTGGATTGGAGATTTTGAGGCATTACTTTAGGCTTCCTGTTTGGTCCATTGGACCTCTTATTCCCAAAGATGCTCTCAAGAACTCATCCACTTCGGATTTAAGAGTTTCAAGGCAACCTGCTGAAAAATGCATGGAATGGCTGGACTCACATGGTTCAGATTCTGTTGTTTATATTTCCTTTGGTTCTCAGAACACAATCAGTGAAACACAGATGATGGAATTGGCTATTGGGTTAGAAAAAAAATTCAGAGCTGAATGGTTGCCTCCAGGGTTCGAAGATCGAATGTGTAAAAGCAAGCAAGGCTTGTTGGTGCACAACTGGGCACCACAGTTGGAGATTTTGTCACACAAATCCACGGGGGCATTTGTAAGTCATTGTGGGTGGAATTCAGTGCTGGAGAGCCTAAACCAAGGAGTTCCGATTATAGGGTGGCCTTTGGCAGCCGAGCAGGCGTTTAACTCAAAGATGCTGGTGGAGGAGATGGGTGTGAGTGTGGAGCTGACAAGGGGAGTGCAGAGTGTTATTGTTGGCAAGGAGGTGAAGAGATTGATAGATTTGGTAATGGACAAAGGTGGCGAAGGAGGAGAAATGAGGAAAAAAGCTGGTGCAATTAAGGCGCAGATAAGAGCAGCAATAAGAGAGGAGGCTGAATTCAAGGGATCTTCTGCAAAGGCAATGGATGATTTTCTTGAAACCATCCTATCAGCAAGACAAGAACATAAATCTATTATTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

488

Amino Acids

53.94

Weight (kDa)

6.08

Isoelectric Point (pI)

48.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 153, 850
AccB1I GGYRCC 1 cut(s) 1048
AciI CCGC 3 cut(s) 346, 383, 474
AclWI GGATC 1 cut(s) 1393
AcoI YGGCCR 2 cut(s) 380, 641
AcsI RAATTY 5 cut(s) 280, 647, 968, 1111, 1376
AfaI GTAC 1 cut(s) 631
AfiI CCNNNNNNNGG 2 cut(s) 355, 1151
AgsI TTSAA 6 cut(s) 140, 332, 368, 834, 1381, 1418
AjnI CCWGG 1 cut(s) 991
AjuI GAANNNNNNNTTGG 2 cut(s) 936, 968
Alw21I GWGCWC 1 cut(s) 1041
Alw26I GTCTC 1 cut(s) 585
Alw44I GTGCAC 1 cut(s) 1037
AlwI GGATC 1 cut(s) 1393
AlwNI CAGNNNCTG 2 cut(s) 266, 887
Ama87I CYCGRG 1 cut(s) 563
AoxI GGCC 4 cut(s) 376, 380, 641, 1157
ApaLI GTGCAC 1 cut(s) 1037
ApeKI GCWGC 7 cut(s) 28, 237, 314, 491, 620, 1166, 1355
ApoI RAATTY 5 cut(s) 280, 647, 968, 1111, 1376
AspLEI GCGC 1 cut(s) 1345
AspS9I GGNCC 4 cut(s) 335, 604, 768, 776
AsuC2I CCSGG 2 cut(s) 564, 565
AsuHPI GGTGA 2 cut(s) 103, 1276
AsuII TTCGAA 1 cut(s) 999
AvaI CYCGRG 1 cut(s) 563
AvaII GGWCC 4 cut(s) 335, 604, 768, 776
BaeGI GKGCMC 2 cut(s) 1041, 1051
BalI TGGCCA 1 cut(s) 643
BanI GGYRCC 1 cut(s) 1048
Bbv12I GWGCWC 1 cut(s) 1041
BbvCI CCTCAGC 1 cut(s) 708
BbvI GCAGC 7 cut(s) 15, 249, 301, 503, 632, 1178, 1367
BccI CCATC 5 cut(s) 116, 411, 934, 1201, 1430
BceAI ACGGC 1 cut(s) 562
BciT130I CCWGG 1 cut(s) 993
BcnI CCSGG 2 cut(s) 564, 565
BcoDI GTCTC 1 cut(s) 585
BfaI CTAG 1 cut(s) 74
BfmI CTRYAG 1 cut(s) 235
BfuAI ACCTGC 2 cut(s) 153, 850
BglI GCCNNNNNGGC 1 cut(s) 1175
BglII AGATCT 1 cut(s) 304
BisI GCNGC 9 cut(s) 29, 238, 315, 346, 383, 492, 621, 1167, 1356
BlpI GCTNAGC 1 cut(s) 222
BlsI GCNGC 9 cut(s) 30, 239, 316, 347, 384, 493, 622, 1168, 1357
Bme1390I CCNGG 3 cut(s) 564, 565, 993
Bme18I GGWCC 4 cut(s) 335, 604, 768, 776
BmeT110I CYCGRG 1 cut(s) 563
BmgT120I GGNCC 4 cut(s) 335, 604, 768, 776
BmiI GGNNCC 1 cut(s) 1050
BmrFI CCNGG 3 cut(s) 564, 565, 993
BmrI ACTGGG 1 cut(s) 1054
BmsI GCATC 2 cut(s) 784, 1182
BmuI ACTGGG 1 cut(s) 1054
BpmI CTGGAG 2 cut(s) 975, 1142
Bpu10I CCTNAGC 3 cut(s) 45, 442, 708
Bpu1102I GCTNAGC 1 cut(s) 222
Bpu14I TTCGAA 1 cut(s) 999
BpuEI CTTGAG 1 cut(s) 785
BpuMI CCSGG 2 cut(s) 564, 565
BsaJI CCNNGG 4 cut(s) 563, 992, 1080, 1135
BsaXI ACNNNNNCTCC 2 cut(s) 1052, 1082
Bsc4I CCNNNNNNNGG 2 cut(s) 355, 1151
Bse118I RCCGGY 1 cut(s) 378
Bse1I ACTGG 2 cut(s) 655, 1049
Bse3DI GCAATG 2 cut(s) 114, 1407
BseBI CCWGG 1 cut(s) 993
BseDI CCNNGG 4 cut(s) 563, 992, 1080, 1135
BseGI GGATG 4 cut(s) 422, 809, 1411, 1422
BseLI CCNNNNNNNGG 2 cut(s) 355, 1151
BseMI GCAATG 2 cut(s) 114, 1407
BseMII CTCAG 7 cut(s) 213, 255, 258, 441, 611, 699, 926
BseNI ACTGG 2 cut(s) 655, 1049
BseRI GAGGAG 3 cut(s) 1217, 1323, 1382
BseSI GKGCMC 2 cut(s) 1041, 1051
BseX3I CGGCCG 1 cut(s) 380
BseXI GCAGC 7 cut(s) 15, 249, 301, 503, 632, 1178, 1367
BseYI CCCAGC 1 cut(s) 660
BsgI GTGCAG 2 cut(s) 510, 1259
Bsh1285I CGRYCG 1 cut(s) 383
BshFI GGCC 4 cut(s) 378, 382, 643, 1159
BshNI GGYRCC 1 cut(s) 1048
BsiEI CGRYCG 1 cut(s) 383
BsiHKAI GWGCWC 1 cut(s) 1041
BsiHKCI CYCGRG 1 cut(s) 563
BsiSI CCGG 2 cut(s) 379, 564
BslFI GGGAC 1 cut(s) 643
BslI CCNNNNNNNGG 2 cut(s) 355, 1151
BsmAI GTCTC 1 cut(s) 585
BsmFI GGGAC 1 cut(s) 643
BsnI GGCC 4 cut(s) 378, 382, 643, 1159
BsoBI CYCGRG 1 cut(s) 563
Bsp119I TTCGAA 1 cut(s) 999
Bsp1286I GDGCHC 2 cut(s) 1041, 1051
Bsp143I GATC 5 cut(s) 304, 351, 574, 1003, 1385
Bsp1720I GCTNAGC 1 cut(s) 222
BspACI CCGC 3 cut(s) 346, 383, 474
BspANI GGCC 4 cut(s) 378, 382, 643, 1159
BspCNI CTCAG 7 cut(s) 214, 254, 259, 442, 610, 700, 925
BspLI GGNNCC 1 cut(s) 1050
BspMAI CTGCAG 1 cut(s) 239
BspMI ACCTGC 2 cut(s) 153, 850
BspPI GGATC 1 cut(s) 1393
BspT104I TTCGAA 1 cut(s) 999
BspT107I GGYRCC 1 cut(s) 1048
BsrDI GCAATG 2 cut(s) 114, 1407
BsrFI RCCGGY 1 cut(s) 378
BsrI ACTGG 2 cut(s) 655, 1049
BssAI RCCGGY 1 cut(s) 378
BssECI CCNNGG 4 cut(s) 563, 992, 1080, 1135
BssMI GATC 5 cut(s) 304, 351, 574, 1003, 1385
BssT1I CCWWGG 1 cut(s) 1135
Bst2UI CCWGG 1 cut(s) 993
Bst4CI ACNGT 3 cut(s) 322, 527, 1056
Bst6I CTCTTC 1 cut(s) 1262
BstAPI GCANNNNNTGC 1 cut(s) 25
BstBI TTCGAA 1 cut(s) 999
BstC8I GCNNGC 5 cut(s) 150, 343, 380, 1022, 1176
BstDEI CTNAG 9 cut(s) 45, 222, 241, 267, 442, 450, 597, 708, 912
BstDSI CCRYGG 1 cut(s) 1080
BstF5I GGATG 4 cut(s) 422, 809, 1411, 1422
BstHHI GCGC 1 cut(s) 1345
BstKTI GATC 5 cut(s) 307, 354, 577, 1006, 1388
BstMAI GTCTC 1 cut(s) 585
BstMBI GATC 5 cut(s) 304, 351, 574, 1003, 1385
BstMCI CGRYCG 1 cut(s) 383
BstMWI GCNNNNNNNGC 4 cut(s) 25, 1026, 1175, 1340
BstNI CCWGG 1 cut(s) 993
BstNSI RCATGY 1 cut(s) 474
BstSCI CCNGG 3 cut(s) 562, 563, 991
BstSFI CTRYAG 1 cut(s) 235
BstSLI GKGCMC 2 cut(s) 1041, 1051
BstV1I GCAGC 7 cut(s) 15, 249, 301, 503, 632, 1178, 1367
BstX2I RGATCY 2 cut(s) 304, 1385
BstYI RGATCY 2 cut(s) 304, 1385
BstZI CGGCCG 1 cut(s) 380
BsuRI GGCC 4 cut(s) 378, 382, 643, 1159
BtgI CCRYGG 1 cut(s) 1080
BtsCI GGATG 4 cut(s) 422, 809, 1411, 1422
BtsI GCAGTG 1 cut(s) 493
BtsIMutI CAGTG 6 cut(s) 264, 327, 447, 493, 931, 1122
BveI ACCTGC 2 cut(s) 153, 850
Cac8I GCNNGC 5 cut(s) 150, 343, 380, 1022, 1176
CaiI CAGNNNCTG 2 cut(s) 266, 887
CfoI GCGC 1 cut(s) 1345
Cfr10I RCCGGY 1 cut(s) 378
Cfr13I GGNCC 4 cut(s) 335, 604, 768, 776
Cfr9I CCCGGG 1 cut(s) 563
Csp6I GTAC 1 cut(s) 630
CspCI CAANNNNNGTGG 2 cut(s) 711, 746
CviAII CATG 5 cut(s) 37, 471, 499, 856, 875
CviQI GTAC 1 cut(s) 630
DdeI CTNAG 9 cut(s) 45, 222, 241, 267, 442, 450, 597, 708, 912
DpnI GATC 5 cut(s) 306, 353, 576, 1005, 1387
DpnII GATC 5 cut(s) 304, 351, 574, 1003, 1385
EaeI YGGCCR 2 cut(s) 380, 641
EagI CGGCCG 1 cut(s) 380
Eam1104I CTCTTC 1 cut(s) 1262
EarI CTCTTC 1 cut(s) 1262
EclXI CGGCCG 1 cut(s) 380
Eco130I CCWWGG 1 cut(s) 1135
Eco32I GATATC 1 cut(s) 361
Eco47I GGWCC 4 cut(s) 335, 604, 768, 776
Eco52I CGGCCG 1 cut(s) 380
Eco88I CYCGRG 1 cut(s) 563
EcoO109I RGGNCCY 1 cut(s) 335
EcoRI GAATTC 2 cut(s) 1111, 1376
EcoRII CCWGG 1 cut(s) 991
EcoRV GATATC 1 cut(s) 361
EcoT14I CCWWGG 1 cut(s) 1135
EcoT22I ATGCAT 1 cut(s) 857
ErhI CCWWGG 1 cut(s) 1135
FaeI CATG 5 cut(s) 40, 474, 502, 859, 878
FalI AAGNNNNNCTT 2 cut(s) 1013, 1045
FaqI GGGAC 1 cut(s) 643
FatI CATG 5 cut(s) 36, 470, 498, 855, 874
Fnu4HI GCNGC 9 cut(s) 29, 238, 315, 346, 383, 492, 621, 1167, 1356
FokI GGATG 4 cut(s) 429, 796, 1409, 1418
FseI GGCCGGCC 1 cut(s) 382
Fsp4HI GCNGC 9 cut(s) 29, 238, 315, 346, 383, 492, 621, 1167, 1356
FspBI CTAG 1 cut(s) 74
GlaI GCGC 1 cut(s) 1344
GluI GCNGC 9 cut(s) 29, 238, 315, 346, 383, 492, 621, 1167, 1356
GsaI CCCAGC 1 cut(s) 664
GsuI CTGGAG 2 cut(s) 975, 1142
HaeIII GGCC 4 cut(s) 378, 382, 643, 1159
HapII CCGG 2 cut(s) 379, 564
HhaI GCGC 1 cut(s) 1345
Hin1II CATG 5 cut(s) 40, 474, 502, 859, 878
Hin6I GCGC 1 cut(s) 1343
HinP1I GCGC 1 cut(s) 1343
HinfI GANTC 3 cut(s) 325, 869, 884
HpaII CCGG 2 cut(s) 379, 564
HphI GGTGA 2 cut(s) 103, 1276
Hpy166II GTNNAC 2 cut(s) 105, 1039
Hpy188I TCNGA 7 cut(s) 244, 403, 820, 883, 915, 974, 1146
Hpy188III TCNNGA 4 cut(s) 329, 572, 802, 1415
Hpy8I GTNNAC 2 cut(s) 105, 1039
Hpy99I CGWCG 1 cut(s) 548
HpyAV CCTTC 4 cut(s) 326, 368, 505, 1298
HpyCH4III ACNGT 3 cut(s) 322, 527, 1056
HpyF10VI GCNNNNNNNGC 4 cut(s) 25, 1026, 1175, 1340
HpyF3I CTNAG 9 cut(s) 45, 222, 241, 267, 442, 450, 597, 708, 912
Hsp92II CATG 5 cut(s) 40, 474, 502, 859, 878
HspAI GCGC 1 cut(s) 1343
KroI GCCGGC 1 cut(s) 378
KroNI GCCGGC 1 cut(s) 380
Kzo9I GATC 5 cut(s) 304, 351, 574, 1003, 1385
LmnI GCTCC 1 cut(s) 1222
Lsp1109I GCAGC 7 cut(s) 15, 249, 301, 503, 632, 1178, 1367
LweI GCATC 2 cut(s) 784, 1182
MaeI CTAG 1 cut(s) 74
MaeIII GTNAC 3 cut(s) 457, 698, 1068
MalI GATC 5 cut(s) 306, 353, 576, 1005, 1387
MboI GATC 5 cut(s) 304, 351, 574, 1003, 1385
MboII GAAGA 3 cut(s) 1013, 1279, 1380
MflI RGATCY 2 cut(s) 304, 1385
MhlI GDGCHC 2 cut(s) 1041, 1051
MlsI TGGCCA 1 cut(s) 643
MluCI AATT 9 cut(s) 202, 280, 647, 714, 944, 968, 1111, 1335, 1376
MluNI TGGCCA 1 cut(s) 643
MlyI GAGTC 1 cut(s) 863
MmeI TCCRAC 2 cut(s) 222, 1038
Mox20I TGGCCA 1 cut(s) 643
Mph1103I ATGCAT 1 cut(s) 857
MroNI GCCGGC 1 cut(s) 378
MscI TGGCCA 1 cut(s) 643
MseI TTAA 5 cut(s) 513, 614, 824, 1182, 1338
Msp20I TGGCCA 1 cut(s) 643
MspA1I CMGCKG 2 cut(s) 601, 707
MspI CCGG 2 cut(s) 379, 564
MspR9I CCNGG 3 cut(s) 564, 565, 993
MvaI CCWGG 1 cut(s) 993
MwoI GCNNNNNNNGC 4 cut(s) 25, 1026, 1175, 1340
NaeI GCCGGC 1 cut(s) 380
NciI CCSGG 2 cut(s) 564, 565
NdeII GATC 5 cut(s) 304, 351, 574, 1003, 1385
NgoMIV GCCGGC 1 cut(s) 378
NlaIII CATG 5 cut(s) 40, 474, 502, 859, 878
NlaIV GGNNCC 1 cut(s) 1050
NmeAIII GCCGAG 1 cut(s) 1195
NmuCI GTSAC 2 cut(s) 457, 1068
NsiI ATGCAT 1 cut(s) 857
NspI RCATGY 1 cut(s) 474
NspV TTCGAA 1 cut(s) 999
PdiI GCCGGC 1 cut(s) 380
PfeI GAWTC 2 cut(s) 325, 884
PkrI GCNGC 9 cut(s) 30, 239, 316, 347, 384, 493, 622, 1168, 1357
PleI GAGTC 1 cut(s) 863
PpsI GAGTC 1 cut(s) 863
PpuMI RGGWCCY 1 cut(s) 335
Psp5II RGGWCCY 1 cut(s) 335
Psp6I CCWGG 1 cut(s) 991
PspFI CCCAGC 1 cut(s) 660
PspGI CCWGG 1 cut(s) 991
PspN4I GGNNCC 1 cut(s) 1050
PspPI GGNCC 4 cut(s) 335, 604, 768, 776
PspPPI RGGWCCY 1 cut(s) 335
PstI CTGCAG 1 cut(s) 239
PstNI CAGNNNCTG 2 cut(s) 266, 887
PsuI RGATCY 2 cut(s) 304, 1385
PvuII CAGCTG 2 cut(s) 601, 707
RigI GGCCGGCC 1 cut(s) 382
RsaI GTAC 1 cut(s) 631
RsaNI GTAC 1 cut(s) 630
SaqAI TTAA 5 cut(s) 513, 614, 824, 1182, 1338
SatI GCNGC 9 cut(s) 29, 238, 315, 346, 383, 492, 621, 1167, 1356
Sau3AI GATC 5 cut(s) 304, 351, 574, 1003, 1385
Sau96I GGNCC 4 cut(s) 335, 604, 768, 776
SchI GAGTC 1 cut(s) 863
ScrFI CCNGG 3 cut(s) 564, 565, 993
SduI GDGCHC 2 cut(s) 1041, 1051
SfaNI GCATC 2 cut(s) 784, 1182
SfcI CTRYAG 1 cut(s) 235
SfuI TTCGAA 1 cut(s) 999
SinI GGWCC 4 cut(s) 335, 604, 768, 776
SmaI CCCGGG 1 cut(s) 565
SmlI CTYRAG 1 cut(s) 800
SmoI CTYRAG 1 cut(s) 800
Sse9I AATT 9 cut(s) 202, 280, 647, 714, 944, 968, 1111, 1335, 1376
SsiI CCGC 3 cut(s) 346, 383, 474
SspMI CTAG 1 cut(s) 74
StyD4I CCNGG 3 cut(s) 562, 563, 991
StyI CCWWGG 1 cut(s) 1135
TaaI ACNGT 3 cut(s) 322, 527, 1056
TaqI TCGA 2 cut(s) 999, 1006
TasI AATT 9 cut(s) 202, 280, 647, 714, 944, 968, 1111, 1335, 1376
TauI GCSGC 2 cut(s) 348, 385
TfiI GAWTC 2 cut(s) 325, 884
Tru1I TTAA 5 cut(s) 513, 614, 824, 1182, 1338
Tru9I TTAA 5 cut(s) 513, 614, 824, 1182, 1338
TscAI CASTG 6 cut(s) 271, 327, 454, 493, 931, 1122
TseFI GTSAC 2 cut(s) 457, 1068
TseI GCWGC 7 cut(s) 28, 237, 314, 491, 620, 1166, 1355
Tsp45I GTSAC 2 cut(s) 457, 1068
TspDTI ATGAA 3 cut(s) 305, 487, 578
TspMI CCCGGG 1 cut(s) 563
TspRI CASTG 6 cut(s) 271, 327, 454, 493, 931, 1122
VneI GTGCAC 1 cut(s) 1037
VpaK11BI GGWCC 4 cut(s) 335, 604, 768, 776
XapI RAATTY 5 cut(s) 280, 647, 968, 1111, 1376
XceI RCATGY 1 cut(s) 474
XmaI CCCGGG 1 cut(s) 563
XspI CTAG 1 cut(s) 74
Zsp2I ATGCAT 1 cut(s) 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.